AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0169290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0169290 MtrunA17_Chr1g0185991 91.577 1294 70 3 1 1255 1 1294 0.0 2394
Msa0169290 MtrunA17_Chr1g0185981 83.551 1301 152 7 1 1252 1 1288 0.0 2161
Msa0169290 MtrunA17_Chr1g0173231 28.401 1007 662 24 7 985 3 978 3.60e-87 308
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0169290 AT2G34357.1 48.834 1286 568 23 16 1250 24 1270 0.0 1100
Msa0169290 AT4G23540.1 28.906 1024 643 27 5 985 10 991 1.58e-95 332

Find 255 sgRNAs with CRISPR-Local

Find 815 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCAGCTTCCAAATTTAA+TGG 0.155327 1_4:+52505234 None:intergenic
ATCCCTTATACCATTAAATT+TGG 0.179078 1_4:-52505244 Msa0169290:CDS
CTTCCAAATTTAATGGTATA+AGG 0.189743 1_4:+52505241 None:intergenic
ACCTCATCAACTGAGATTTC+TGG 0.202537 1_4:-52507775 Msa0169290:CDS
CTGCTGTTCTTCTTCGCTTC+TGG 0.206041 1_4:+52497871 None:intergenic
TGAGGTTCTGCTTGGGCTTA+TGG 0.208576 1_4:-52503148 Msa0169290:CDS
CAGATCTTTCAACAAATTAT+TGG 0.220117 1_4:+52504691 None:intergenic
ATTTATCCGTCTCAAATAAA+TGG 0.226752 1_4:-52505212 Msa0169290:CDS
TCCTCTATGTTTCACAAATT+AGG 0.227959 1_4:-52507319 Msa0169290:intron
CATATTATTCCACGAATATT+AGG 0.238036 1_4:+52504866 None:intergenic
TTTCACATTTGTTGATTCAT+AGG 0.241660 1_4:-52509171 Msa0169290:CDS
GGCCAATCTTGGTTTATTAA+AGG 0.244569 1_4:-52501478 Msa0169290:CDS
TTCTCCCTGCAGGCCAATCT+TGG 0.277069 1_4:-52501489 Msa0169290:intron
ATTATACAAGACTTGTTCTT+TGG 0.291284 1_4:+52504763 None:intergenic
GTGTATTTATTTGATGATAA+AGG 0.295011 1_4:-52497528 Msa0169290:three_prime_UTR
CAATCCTTCTGCTTGTGATT+TGG 0.298079 1_4:+52501446 None:intergenic
TGCCTCTGTGGCTGCAAGTA+TGG 0.299117 1_4:+52507522 None:intergenic
TTGGAGAGTGGTGTTGTTCA+TGG 0.303206 1_4:-52509205 Msa0169290:CDS
AGTAATAAAGCCAGCATTGC+AGG 0.304957 1_4:-52503506 Msa0169290:intron
TCGCTTCTGGCCTTTAGTTC+CGG 0.307234 1_4:+52497884 None:intergenic
ACACACTTGTTTACTCTTTG+TGG 0.311562 1_4:-52504982 Msa0169290:CDS
TGATGAAAGTTTGATTAAAC+AGG 0.311799 1_4:-52507473 Msa0169290:CDS
ATTATCACTATGCTGCTTCT+TGG 0.316544 1_4:-52507363 Msa0169290:CDS
TGTTATGTTGCCATCGAGTT+TGG 0.322470 1_4:-52509224 Msa0169290:CDS
AAATCAGCAGTGTCTTCATT+TGG 0.329028 1_4:-52498434 Msa0169290:CDS
AGCTTGAACCTTATGCATAT+TGG 0.332365 1_4:-52497767 Msa0169290:CDS
TCCCTTGCTCGTTCAATCAT+AGG 0.348873 1_4:+52505123 None:intergenic
AACCTTTAATAAACCAAGAT+TGG 0.349531 1_4:+52501476 None:intergenic
GTTCCTGTGCGATGCGGTCC+AGG 0.354576 1_4:+52509368 None:intergenic
AAGGTTGCTCGCGGCCTTGT+TGG 0.356041 1_4:-52501737 Msa0169290:CDS
TAGACAAAACAAGAACATTC+AGG 0.356460 1_4:-52504822 Msa0169290:CDS
AATAAAGGCAATCAAGTCTA+TGG 0.356481 1_4:+52503091 None:intergenic
CTGTGGTAAATATGACAAAA+AGG 0.357847 1_4:-52497677 Msa0169290:CDS
TTCTGAATCGTCTACTTTGT+TGG 0.358506 1_4:+52503803 None:intergenic
AGGTTGCTCGCGGCCTTGTT+GGG 0.364178 1_4:-52501736 Msa0169290:CDS
TCCATCCACATTTGTCCTGC+TGG 0.368547 1_4:-52501621 Msa0169290:CDS
GAACAGGGCTTATGAAATTC+TGG 0.371930 1_4:-52501983 Msa0169290:CDS
CCGTTATGCGCCTTGTGACT+AGG 0.376054 1_4:+52507887 None:intergenic
GTGTTGGTGGTTTGCGGCGG+TGG 0.378305 1_4:+52509483 None:intergenic
TTCCAAATTTAATGGTATAA+GGG 0.379913 1_4:+52505242 None:intergenic
CAAGAATATACAAAACTTGT+TGG 0.382877 1_4:+52508001 None:intergenic
TTCTCCTTCAACACAGCAAC+GGG 0.387031 1_4:+52509280 None:intergenic
ATTCTAAAACAGTATATTGT+TGG 0.389703 1_4:-52505180 Msa0169290:CDS
AACACCTCAAGTAGTGCTTC+GGG 0.393913 1_4:+52507820 None:intergenic
GGGTCAGCTCTTGTTGCAAT+GGG 0.394671 1_4:-52505282 Msa0169290:CDS
CTTGCAGACAAATGACTATC+AGG 0.396859 1_4:+52497909 None:intergenic
AATCAGCAGTGTCTTCATTT+GGG 0.400201 1_4:-52498433 Msa0169290:intron
ATCATTTGCATTTGCTCCAC+CGG 0.400256 1_4:+52508077 None:intergenic
GAGTCGTCGGCCACAGCAAC+GGG 0.401771 1_4:-52497724 Msa0169290:CDS
CATTCAGGATTCAAATGATA+AGG 0.406494 1_4:-52504807 Msa0169290:CDS
TTTCCTCACTGAGATAATAC+TGG 0.407293 1_4:-52502868 Msa0169290:CDS
CGAAGCTTGAGGTTCTGCTT+GGG 0.409869 1_4:-52503155 Msa0169290:CDS
TTATCACTATGCTGCTTCTT+GGG 0.410599 1_4:-52507362 Msa0169290:CDS
CGTTATGCGCCTTGTGACTA+GGG 0.411687 1_4:+52507888 None:intergenic
AATTTCATAAGCCCTGTTCC+TGG 0.412637 1_4:+52501987 None:intergenic
CATGGACTATCAATAAATAA+AGG 0.414417 1_4:+52503076 None:intergenic
TGCAGCTTCATGCGTGCCTT+GGG 0.415736 1_4:-52505302 Msa0169290:intron
TTCGCAGCTTCATTGTTGCC+TGG 0.416944 1_4:-52503562 Msa0169290:CDS
AGTTCCCGTTGCTGTGTTGA+AGG 0.418162 1_4:-52509284 Msa0169290:CDS
TCGAAGCTTGAGGTTCTGCT+TGG 0.418257 1_4:-52503156 Msa0169290:CDS
AGATGATGGTGGTTGTTTGC+AGG 0.419096 1_4:-52504642 Msa0169290:intron
TTTGAAGTGGTTAAGAATGT+TGG 0.419659 1_4:+52507933 None:intergenic
ATCTCAGTGAGGAAAACTTC+TGG 0.421709 1_4:+52502876 None:intergenic
TGGGTCAGCTCTTGTTGCAA+TGG 0.423842 1_4:-52505283 Msa0169290:CDS
ACTGATTGAGACACGTCATT+TGG 0.425094 1_4:+52503759 None:intergenic
ATAGTGACCTGTTTCCTAAA+GGG 0.427478 1_4:+52506052 None:intergenic
CTTGTATAATTACTCGCAAC+AGG 0.428147 1_4:-52504750 Msa0169290:CDS
TAACACCTCAAGTAGTGCTT+CGG 0.429890 1_4:+52507819 None:intergenic
AGACACAGCTAAAAGTTTCA+AGG 0.430200 1_4:-52504927 Msa0169290:CDS
CTTAGACAAACCTGCAATGC+TGG 0.433016 1_4:+52503496 None:intergenic
CTTGAAGGCAAGAGTGTCTC+TGG 0.435014 1_4:-52497654 Msa0169290:CDS
CAGAGCCTGGTAGGGCTGGT+AGG 0.435386 1_4:-52497851 Msa0169290:CDS
GTGCAGCTTCATGCGTGCCT+TGG 0.435418 1_4:-52505303 Msa0169290:intron
TCGGCCACAGCAACGGGCTG+CGG 0.436473 1_4:-52497718 Msa0169290:CDS
AGAGCCTGGTAGGGCTGGTA+GGG 0.440903 1_4:-52497850 Msa0169290:CDS
TGCTTGACCGGCAGAAAGTA+AGG 0.447864 1_4:-52498082 Msa0169290:CDS
GGATTATAGTAGGCAAGATA+TGG 0.448758 1_4:-52504786 Msa0169290:CDS
ACTGCTCGCTTGCTTGATGC+TGG 0.451373 1_4:-52507736 Msa0169290:CDS
GATTATTATTTGTAGGATGT+TGG 0.451539 1_4:-52503403 Msa0169290:intron
GAAAGGAAGGCATTCTTTCA+AGG 0.451620 1_4:+52507975 None:intergenic
ATGAGTCGATGGCGATGGCC+TGG 0.451976 1_4:-52502899 Msa0169290:CDS
TGAATTGCATATATCATCGT+TGG 0.452485 1_4:+52509528 None:intergenic
CTGCGCCACATGCTCATCCC+TGG 0.456440 1_4:-52509386 Msa0169290:CDS
ACAGAGGTGTTGGTGGTTTG+CGG 0.458316 1_4:+52509477 None:intergenic
GCAATCAAGTCTATGGCGTT+TGG 0.458967 1_4:+52503098 None:intergenic
TGAGATAATACTGGCTCTAA+AGG 0.459212 1_4:-52502859 Msa0169290:CDS
GTGCGTCGATGAGGTGGATA+GGG 0.459631 1_4:+52509338 None:intergenic
AAAGAAGAACCTAATATTCG+TGG 0.460647 1_4:-52504875 Msa0169290:CDS
AAGCTGGTGGAGATATTAAG+AGG 0.462330 1_4:-52497797 Msa0169290:CDS
AGTCAAAGGTTTAGCTCGCT+TGG 0.462774 1_4:-52501687 Msa0169290:CDS
TAGACTGGTTCTCTTCCAAC+AGG 0.465106 1_4:-52508217 Msa0169290:CDS
TTCACATTTGTTGATTCATA+GGG 0.466227 1_4:-52509170 Msa0169290:CDS
CAACGGGCTGCGGCAAGAAA+AGG 0.470152 1_4:-52497708 Msa0169290:CDS
ACAGCAGAGCCTGGTAGGGC+TGG 0.471151 1_4:-52497855 Msa0169290:CDS
TTCATAGGGATAGTGTTCAT+TGG 0.476869 1_4:-52509156 Msa0169290:CDS
ACTGTTGCACTTATCATATG+TGG 0.478961 1_4:+52501707 None:intergenic
AGTATACCTCTCATAAAGTA+AGG 0.479237 1_4:+52506118 None:intergenic
AAGAATATACAAAACTTGTT+GGG 0.480754 1_4:+52508002 None:intergenic
CTTCATTTACAGGGTACAAT+CGG 0.483174 1_4:-52503912 Msa0169290:intron
ACGTGTCTCAATCAGTTCTC+AGG 0.484837 1_4:-52503752 Msa0169290:intron
GAGATTGCCTTCTTACCTGT+TGG 0.485411 1_4:+52508202 None:intergenic
GCAAAGTAGACGGAACCATA+TGG 0.487129 1_4:-52498555 Msa0169290:CDS
ACTTGAAAGGTTTCTACTGC+TGG 0.487430 1_4:-52508100 Msa0169290:CDS
AGCCACTTGATTTGCTTGAC+CGG 0.490414 1_4:-52498094 Msa0169290:CDS
TGGTTGAGTGTTTGTTTAAG+TGG 0.490627 1_4:-52501404 Msa0169290:CDS
GATAGTGACCTGTTTCCTAA+AGG 0.491830 1_4:+52506051 None:intergenic
TTGGATGAATCAAGGATGTC+AGG 0.493009 1_4:-52507433 Msa0169290:CDS
TTCTCTTCCAACAGGTAAGA+AGG 0.494757 1_4:-52508209 Msa0169290:CDS
CGTTTGATCATCCGTGAGGA+AGG 0.495561 1_4:-52497984 Msa0169290:CDS
TCGTTTGTTCCCCTTCCTCA+CGG 0.496835 1_4:+52497973 None:intergenic
GCAGTAGAAACCTTTCAAGT+AGG 0.497113 1_4:+52508103 None:intergenic
AGTCATTTGTCTGCAAGGTC+CGG 0.497944 1_4:-52497903 Msa0169290:CDS
AGGTTGCAACAGAAAATTTG+AGG 0.498991 1_4:-52504730 Msa0169290:CDS
AACAGAAAATTTGAGGGCAC+TGG 0.500332 1_4:-52504723 Msa0169290:CDS
AGCAAGGGAGAAGGCTCAAA+AGG 0.502078 1_4:-52505109 Msa0169290:intron
CGAAGAAGAACAGCAGAGCC+TGG 0.503610 1_4:-52497864 Msa0169290:CDS
AGTGAGGAAAACTTCTGGCC+AGG 0.505041 1_4:+52502881 None:intergenic
GCCTATGATTGAACGAGCAA+GGG 0.506421 1_4:-52505124 Msa0169290:CDS
CAACACCTCTGTGCCGTCAT+CGG 0.508265 1_4:-52509466 Msa0169290:CDS
GATCATGGAAGAAGTCGAAA+TGG 0.508740 1_4:-52509575 None:intergenic
GAAGAACAGCAGAGCCTGGT+AGG 0.508883 1_4:-52497860 Msa0169290:CDS
AAATGATGATGATGGAACTA+AGG 0.509116 1_4:-52508061 Msa0169290:CDS
AAACGATGGTGATGGAACTA+AGG 0.509658 1_4:-52508028 Msa0169290:CDS
CCTTTACTTATTAAAATCAA+AGG 0.510837 1_4:-52503022 Msa0169290:intron
ATGCATATTGGCCACTTGAT+CGG 0.511215 1_4:-52497755 Msa0169290:CDS
GGGAGTGGATCAGATAACTT+TGG 0.513350 1_4:-52507452 Msa0169290:CDS
ATCCCTGGACCGCATCGCAC+AGG 0.513406 1_4:-52509371 Msa0169290:CDS
CAAATGATAAGGATTATAGT+AGG 0.514770 1_4:-52504796 Msa0169290:CDS
GAAGGATAGTTACAAAATGA+AGG 0.516245 1_4:+52504950 None:intergenic
TGCCTATGATTGAACGAGCA+AGG 0.516549 1_4:-52505125 Msa0169290:CDS
TTAGATCTGAGAATCTCAAA+AGG 0.517424 1_4:-52498052 Msa0169290:CDS
TCTCCTCGTCTACAAGTGCA+TGG 0.518772 1_4:+52501950 None:intergenic
AAGTTTGATTAAACAGGGAG+TGG 0.520498 1_4:-52507467 Msa0169290:CDS
CTGAAATCTACAAAAGATGA+TGG 0.520706 1_4:-52504656 Msa0169290:CDS
TCTGCAAGGTCCGGAACTAA+AGG 0.523343 1_4:-52497894 Msa0169290:CDS
AAAGAACTCAAAAGAAAGGC+AGG 0.523354 1_4:-52497602 Msa0169290:CDS
TCAAGTGGCCAATATGCATA+AGG 0.523498 1_4:+52497759 None:intergenic
CTTGCCGCAGCCCGTTGCTG+TGG 0.524543 1_4:+52497714 None:intergenic
TGGTGGAGATATTAAGAGGA+AGG 0.524645 1_4:-52497793 Msa0169290:CDS
GAGCAGACCTTACTTTCTGC+CGG 0.528773 1_4:+52498075 None:intergenic
CGTCATCGGTGCAATGTCAC+AGG 0.529646 1_4:-52509452 Msa0169290:CDS
GATTCGTCAGATAAGTGCTC+AGG 0.531397 1_4:+52498125 None:intergenic
GCAAATGCAAATGATGATGA+TGG 0.531564 1_4:-52508069 Msa0169290:CDS
AGTGCGTCGATGAGGTGGAT+AGG 0.531807 1_4:+52509337 None:intergenic
CTGTGACATTGCACCGATGA+CGG 0.533423 1_4:+52509453 None:intergenic
ATGATAAGTGCAACAGTCAA+AGG 0.535437 1_4:-52501701 Msa0169290:CDS
ACCTAATTTGTGAAACATAG+AGG 0.539487 1_4:+52507318 None:intergenic
ATATCTTTCGCATCTAATCC+AGG 0.541115 1_4:+52503544 None:intergenic
TAAACGAAAACAGGGAAAGC+CGG 0.542138 1_4:+52497419 None:intergenic
CAGGTATTCTGCATCACTAC+CGG 0.542320 1_4:+52498502 None:intergenic
TGTTGGTGTCATGCAGAAGA+AGG 0.543631 1_4:-52503386 Msa0169290:CDS
TTTGATCATCCGTGAGGAAG+GGG 0.546352 1_4:-52497982 Msa0169290:CDS
TTCCTGTGCGATGCGGTCCA+GGG 0.546885 1_4:+52509369 None:intergenic
GCATCATAGTCTGAATCAGC+TGG 0.547628 1_4:+52497942 None:intergenic
TATTAGCATCTGCAAGTGAA+GGG 0.550929 1_4:-52508134 Msa0169290:CDS
TGAGTCGTCGGCCACAGCAA+CGG 0.551417 1_4:-52497725 Msa0169290:CDS
AGATAACTTTGGATGAATCA+AGG 0.554149 1_4:-52507441 Msa0169290:CDS
GAATATGCTAGCAGAAAAGC+TGG 0.555725 1_4:-52497813 Msa0169290:CDS
TGACGGCACAGAGGTGTTGG+TGG 0.556509 1_4:+52509470 None:intergenic
TTTCAAAAGCAACTACATCC+AGG 0.559469 1_4:-52499041 Msa0169290:intron
CTGATAGTCATTTGTCTGCA+AGG 0.559535 1_4:-52497908 Msa0169290:CDS
CTATTAGCATCTGCAAGTGA+AGG 0.563306 1_4:-52508135 Msa0169290:CDS
GGTTGCAACAGAAAATTTGA+GGG 0.564627 1_4:-52504729 Msa0169290:CDS
GGCTGCGGCAAGAAAAGGTA+TGG 0.566352 1_4:-52497703 Msa0169290:CDS
CGATGACGGCACAGAGGTGT+TGG 0.566754 1_4:+52509467 None:intergenic
GTCAGACGATGATGAGGTGG+AGG 0.568488 1_4:-52498021 Msa0169290:CDS
GTGCTAAATCTGAAGAAACT+AGG 0.569984 1_4:-52499071 Msa0169290:CDS
GAAAGGTTTCTACTGCTGGC+CGG 0.570102 1_4:-52508096 Msa0169290:CDS
CTTATTTAAGAAGAAAATGT+CGG 0.570985 1_4:-52503850 Msa0169290:CDS
TATGGCGTTTGGCAGAAGAA+TGG 0.572032 1_4:+52503109 None:intergenic
TTAAAAGTGCGTCGATGAGG+TGG 0.574607 1_4:+52509332 None:intergenic
AGAATCTCAAAAGGAAGTCA+AGG 0.575312 1_4:-52498043 Msa0169290:CDS
TTTGGCATCTGAACATGAAG+AGG 0.575489 1_4:-52507545 Msa0169290:CDS
TATCGTATATTATTTGCAGC+CGG 0.575621 1_4:-52497438 Msa0169290:three_prime_UTR
CTGATTCAGACTATGATGCT+AGG 0.575801 1_4:-52497938 Msa0169290:CDS
CCTAGTCACAAGGCGCATAA+CGG 0.576731 1_4:-52507887 Msa0169290:CDS
TCAACTGAGATTTCTGGAGA+TGG 0.578863 1_4:-52507769 Msa0169290:CDS
GTGGCGCAGAAGTATGCGAC+AGG 0.579576 1_4:+52509400 None:intergenic
CAGCATAGTGATAATCAAGT+AGG 0.580924 1_4:+52507371 None:intergenic
CACCTCAAGTAGTGCTTCGG+GGG 0.582090 1_4:+52507822 None:intergenic
AGATCAAGGAACGGAAAGAG+AGG 0.582196 1_4:-52499101 Msa0169290:CDS
TAAGCCCTACCAGCCCTACC+AGG 0.584920 1_4:+52497846 None:intergenic
AACTCTCCTTACTTTATGAG+AGG 0.585087 1_4:-52506124 Msa0169290:CDS
GCAAATGAAAACGATGGTGA+TGG 0.585140 1_4:-52508036 Msa0169290:CDS
CTTCTCCTTCAACACAGCAA+CGG 0.586763 1_4:+52509279 None:intergenic
GGAGAAGAGAGAGTTTCTAT+CGG 0.587647 1_4:-52509263 Msa0169290:CDS
GTAGCCAAATCACAAGCAGA+AGG 0.588275 1_4:-52501450 Msa0169290:CDS
ACAGGATGAGTCGATGGCGA+TGG 0.588672 1_4:-52502904 Msa0169290:intron
AAGAACAGCAGAGCCTGGTA+GGG 0.589719 1_4:-52497859 Msa0169290:CDS
AACGATGGTGATGGAACTAA+GGG 0.589905 1_4:-52508027 Msa0169290:CDS
CATGCTCTTGAGTGCCTCTG+TGG 0.592318 1_4:+52507510 None:intergenic
GTTTGATCATCCGTGAGGAA+GGG 0.592610 1_4:-52497983 Msa0169290:CDS
TCCAGCAGGACAAATGTGGA+TGG 0.593882 1_4:+52501620 None:intergenic
GATTGAACGAGCAAGGGAGA+AGG 0.598453 1_4:-52505118 Msa0169290:CDS
TCCAGAAATCTCAGTTGATG+AGG 0.599100 1_4:+52507774 None:intergenic
CTTGTAGACGAGGAGAGAGG+TGG 0.601164 1_4:-52501943 Msa0169290:CDS
CTCCTCGTCTACAAGTGCAT+GGG 0.601413 1_4:+52501951 None:intergenic
AAGGATTGCAAATGCATCTG+AGG 0.602595 1_4:-52501431 Msa0169290:CDS
TGCGTCGATGAGGTGGATAG+GGG 0.603129 1_4:+52509339 None:intergenic
GTCACAAGGCGCATAACGGA+TGG 0.603827 1_4:-52507883 Msa0169290:CDS
GCGGTCCAGGGATGAGCATG+TGG 0.606307 1_4:+52509381 None:intergenic
ATCGGAAAATGATGAGTCGT+CGG 0.608141 1_4:-52497737 Msa0169290:CDS
TTGTTAAAAGTGCGTCGATG+AGG 0.611791 1_4:+52509329 None:intergenic
TTGTAGACGAGGAGAGAGGT+GGG 0.612466 1_4:-52501942 Msa0169290:CDS
GATGAAAGTTTGATTAAACA+GGG 0.613341 1_4:-52507472 Msa0169290:CDS
CACTGCTGATTTGAGATGCG+TGG 0.613580 1_4:+52498445 None:intergenic
TGGTAGGGCTTACACTGGGA+AGG 0.613888 1_4:-52497835 Msa0169290:CDS
GAGGTGTTGGTGGTTTGCGG+CGG 0.616455 1_4:+52509480 None:intergenic
CTGCCGACAGGATGAGTCGA+TGG 0.616653 1_4:-52502910 Msa0169290:intron
AGGGCTGGTAGGGCTTACAC+TGG 0.618442 1_4:-52497840 Msa0169290:CDS
ATGCGACAGGTGAAGAAGAG+AGG 0.618702 1_4:+52509413 None:intergenic
TGGGTCAACCCCTAGTCACA+AGG 0.620843 1_4:-52507897 Msa0169290:CDS
GTCAAGGTCAGACGATGATG+AGG 0.621447 1_4:-52498027 Msa0169290:CDS
GTAGCAGATTGATAGAGCCA+TGG 0.622425 1_4:-52497565 Msa0169290:exon
GTTATGCGCCTTGTGACTAG+GGG 0.624081 1_4:+52507889 None:intergenic
CATGGAAGAAGTCGAAATGG+AGG 0.624158 1_4:-52509572 Msa0169290:CDS
AGTGTCTTTAATGATCTCAA+AGG 0.624487 1_4:-52507661 Msa0169290:intron
AGGTTTCTACTGCTGGCCGG+TGG 0.625023 1_4:-52508093 Msa0169290:CDS
CACTAAATTACAGCAAACCA+TGG 0.627971 1_4:+52497548 None:intergenic
ACACCACTCTCCAAACTCGA+TGG 0.628441 1_4:+52509214 None:intergenic
TTTCTTCAGATTTAGCACCT+CGG 0.638177 1_4:+52499076 None:intergenic
GAAAGTTTATCAAGACATTG+CGG 0.639694 1_4:+52508169 None:intergenic
GGGCTGGTAGGGCTTACACT+GGG 0.640050 1_4:-52497839 Msa0169290:CDS
AAGAAAAGGTATGGCAACTG+TGG 0.640183 1_4:-52497694 Msa0169290:CDS
AAGGTCAGACGATGATGAGG+TGG 0.640595 1_4:-52498024 Msa0169290:CDS
TCTCTGTCTTAACCCAACAT+CGG 0.642234 1_4:-52507851 Msa0169290:CDS
TGCCCATGCACTTGTAGACG+AGG 0.643766 1_4:-52501953 Msa0169290:CDS
AATGATGATGATGGAACTAA+GGG 0.647447 1_4:-52508060 Msa0169290:CDS
ATTAGCATCTGCAAGTGAAG+GGG 0.649135 1_4:-52508133 Msa0169290:CDS
GAGGTGGAGGTAGATTCTGA+AGG 0.649844 1_4:-52498008 Msa0169290:CDS
TGCCGGTCAAGCAAATCAAG+TGG 0.651293 1_4:+52498092 None:intergenic
TTGAGATCATTAAAGACACT+AGG 0.652067 1_4:+52507664 None:intergenic
ATGCCTCTGACTTCAAGACA+TGG 0.654569 1_4:+52503058 None:intergenic
TTGTAAAACAGATCAAGGAA+CGG 0.654616 1_4:-52499110 Msa0169290:intron
ACACCTCAAGTAGTGCTTCG+GGG 0.654699 1_4:+52507821 None:intergenic
GATAATACTGGCTCTAAAGG+AGG 0.656500 1_4:-52502856 Msa0169290:intron
TTGCAACAAGAGCTGACCCA+AGG 0.656828 1_4:+52505286 None:intergenic
GCGTCGATGAGGTGGATAGG+GGG 0.663260 1_4:+52509340 None:intergenic
GATTAGGTTCCTGTGCGATG+CGG 0.673853 1_4:+52509362 None:intergenic
GAACGGAAAGAGAGGAACCG+AGG 0.676661 1_4:-52499093 Msa0169290:CDS
GCACTTGTAGACGAGGAGAG+AGG 0.679073 1_4:-52501946 Msa0169290:CDS
TTGTGAGCTAAGGTTGCTCG+CGG 0.682338 1_4:-52501746 Msa0169290:intron
TATGCTAGCAGAAAAGCTGG+TGG 0.683312 1_4:-52497810 Msa0169290:CDS
AGTCCATGTCTTGAAGTCAG+AGG 0.684722 1_4:-52503061 Msa0169290:CDS
TTGCCATCGAGTTTGGAGAG+TGG 0.688858 1_4:-52509217 Msa0169290:CDS
GGCCATACTTGCAGCCACAG+AGG 0.690135 1_4:-52507524 Msa0169290:CDS
AAAGAACAAAGAGATTACCA+AGG 0.692817 1_4:-52501594 Msa0169290:intron
AGTGATGCAGAATACCTGAA+CGG 0.696328 1_4:-52498497 Msa0169290:CDS
AAATCTACAAAAGATGATGG+TGG 0.698268 1_4:-52504653 Msa0169290:CDS
AAGGGAGCAAATGAAAACGA+TGG 0.708803 1_4:-52508042 Msa0169290:CDS
GAGCCAGTATTATCTCAGTG+AGG 0.710886 1_4:+52502865 None:intergenic
GCAAATGCATCTGAGGAGCG+TGG 0.728048 1_4:-52501424 Msa0169290:CDS
CGTTTGGCAGAAGAATGGCA+AGG 0.732352 1_4:+52503114 None:intergenic
TTGCACCGATGACGGCACAG+AGG 0.748299 1_4:+52509461 None:intergenic
AGGACGTTTGATCATCCGTG+AGG 0.749026 1_4:-52497988 Msa0169290:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTATATAATTTGTTTGT+TGG - chr1_4:52499754-52499773 Msa0169290:intron 10.0%
!!! ATTTATATAATTTGTTTGTT+GGG - chr1_4:52499755-52499774 Msa0169290:intron 10.0%
!! ATAGAATTTATACTTATATA+TGG - chr1_4:52502899-52502918 Msa0169290:CDS 10.0%
!! AATTTGTAAAAAAGTAATTT+AGG - chr1_4:52506475-52506494 Msa0169290:intron 10.0%
!! ATTTGTAAAAAAGTAATTTA+GGG - chr1_4:52506476-52506495 Msa0169290:intron 10.0%
!!! TTTTTTTTTTTTTTGCTTTT+TGG + chr1_4:52506552-52506571 None:intergenic 10.0%
!! TTAAAAAAAAATCTACAAAA+AGG + chr1_4:52506862-52506881 None:intergenic 10.0%
!!! TGTTAAATTTTTTAATTAAG+TGG - chr1_4:52509542-52509561 Msa0169290:CDS 10.0%
!!! TTCAAAACTCTTTTAAATAT+GGG - chr1_4:52499087-52499106 Msa0169290:CDS 15.0%
!!! GTTTCTATTATAGTTTTTAT+AGG + chr1_4:52500590-52500609 None:intergenic 15.0%
!! ATATATTTAAGAGAAAAAAC+AGG + chr1_4:52500769-52500788 None:intergenic 15.0%
!! TATTTGTGTAATGAAATTAT+AGG + chr1_4:52500803-52500822 None:intergenic 15.0%
!! TTAACATTAACTTATTTACT+AGG + chr1_4:52502682-52502701 None:intergenic 15.0%
!!! TTTTTTATTTTTTGTGAAGT+TGG - chr1_4:52503315-52503334 Msa0169290:intron 15.0%
!! TTATTGTGATTATTATTTGT+AGG - chr1_4:52503593-52503612 Msa0169290:intron 15.0%
!!! TTGTATTGGTTTTTATTTAT+TGG - chr1_4:52503728-52503747 Msa0169290:intron 15.0%
!!! TATTAAGTTTTTAATAGGAT+AGG - chr1_4:52504789-52504808 Msa0169290:CDS 15.0%
!!! TTTACATCTTCTATTTTATT+TGG - chr1_4:52505143-52505162 Msa0169290:CDS 15.0%
!!! ATCATTTTGATAATTCTTTT+AGG - chr1_4:52505899-52505918 Msa0169290:intron 15.0%
!!! TTAGTTTTTTTGAAAATTCA+GGG + chr1_4:52505994-52506013 None:intergenic 15.0%
!! TTTGTAAAAAAGTAATTTAG+GGG - chr1_4:52506477-52506496 Msa0169290:intron 15.0%
!! TAAAAAAATTGAAACTTTCA+AGG - chr1_4:52507784-52507803 Msa0169290:CDS 15.0%
!! AAAAAAATTGAAACTTTCAA+GGG - chr1_4:52507785-52507804 Msa0169290:CDS 15.0%
!!! AAGATTTTAACACAAAAAAA+TGG + chr1_4:52507854-52507873 None:intergenic 15.0%
!!! AGAAAAAAATGACAATTTTT+GGG + chr1_4:52508258-52508277 None:intergenic 15.0%
!!! AAGAAAAAAATGACAATTTT+TGG + chr1_4:52508259-52508278 None:intergenic 15.0%
!! GTAATCATTGTTAATATAAA+TGG - chr1_4:52508649-52508668 Msa0169290:intron 15.0%
!! AATACCAAAAATAAAAAGAT+AGG + chr1_4:52508703-52508722 None:intergenic 15.0%
!!! TTTCAAATTTTCTATCTGAT+AGG - chr1_4:52497945-52497964 Msa0169290:CDS 20.0%
!!! TTCAAATTTTCTATCTGATA+GGG - chr1_4:52497946-52497965 Msa0169290:CDS 20.0%
!! AAACCTTTATAATAATCTGA+TGG - chr1_4:52498086-52498105 Msa0169290:CDS 20.0%
!! TAACCATCAGATTATTATAA+AGG + chr1_4:52498092-52498111 None:intergenic 20.0%
!! ATTGTTAATCAACAAATCAT+AGG - chr1_4:52498188-52498207 Msa0169290:intron 20.0%
!! ATTATTACTATTGTGAATTG+TGG - chr1_4:52498715-52498734 Msa0169290:intron 20.0%
!! TTATTACTATTGTGAATTGT+GGG - chr1_4:52498716-52498735 Msa0169290:intron 20.0%
!!! TTTTGATTAGTTTAATAGAC+TGG - chr1_4:52498771-52498790 Msa0169290:intron 20.0%
!!! AAGAATATACAAAACTTGTT+GGG + chr1_4:52499004-52499023 None:intergenic 20.0%
!!! TATTTAAAAGAGTTTTGAAG+TGG + chr1_4:52499086-52499105 None:intergenic 20.0%
!!! CTTCAAAACTCTTTTAAATA+TGG - chr1_4:52499086-52499105 Msa0169290:CDS 20.0%
!!! TTTTAAATGTGCAGATATTT+TGG - chr1_4:52499440-52499459 Msa0169290:intron 20.0%
!!! TACACAAATTTTCTCAATAA+TGG + chr1_4:52499601-52499620 None:intergenic 20.0%
!! TGACTAATAATGTATACAAA+AGG - chr1_4:52499806-52499825 Msa0169290:intron 20.0%
!! GACTAATAATGTATACAAAA+GGG - chr1_4:52499807-52499826 Msa0169290:intron 20.0%
!! AGAGTAAAATTTGAATCAAA+AGG - chr1_4:52499843-52499862 Msa0169290:intron 20.0%
!! GAGTAAAATTTGAATCAAAA+GGG - chr1_4:52499844-52499863 Msa0169290:intron 20.0%
!!! AGTTGAAGGAAAAATTTTAT+CGG - chr1_4:52500269-52500288 Msa0169290:intron 20.0%
!! TGGTTTATGATATAACATAA+TGG - chr1_4:52500651-52500670 Msa0169290:intron 20.0%
!! TAATCTCAAAAATAAGTAAC+AGG + chr1_4:52500836-52500855 None:intergenic 20.0%
!! TCTTATCATGTGTATAAAAT+TGG - chr1_4:52501228-52501247 Msa0169290:intron 20.0%
!! CTTATCATGTGTATAAAATT+GGG - chr1_4:52501229-52501248 Msa0169290:intron 20.0%
!! TATAAGGGATAAAAAAGTTT+CGG + chr1_4:52501749-52501768 None:intergenic 20.0%
!! TTCCAAATTTAATGGTATAA+GGG + chr1_4:52501764-52501783 None:intergenic 20.0%
!!! ACAATATACTGTTTTAGAAT+TGG + chr1_4:52501823-52501842 None:intergenic 20.0%
!!! ATTCTAAAACAGTATATTGT+TGG - chr1_4:52501823-52501842 Msa0169290:intron 20.0%
!! ATTTCTATATTCACAATTGA+AGG + chr1_4:52502881-52502900 None:intergenic 20.0%
!! CAAATCAAATGTAACAAATA+AGG + chr1_4:52503044-52503063 None:intergenic 20.0%
!! CTTATTTAAGAAGAAAATGT+CGG - chr1_4:52503153-52503172 Msa0169290:CDS 20.0%
!! AGTTTCAAATTATCTTGTAT+TGG - chr1_4:52503714-52503733 Msa0169290:intron 20.0%
!!! CCTTTGATTTTAATAAGTAA+AGG + chr1_4:52503984-52504003 None:intergenic 20.0%
!! CCTTTACTTATTAAAATCAA+AGG - chr1_4:52503981-52504000 Msa0169290:intron 20.0%
!!! TGTTAAATGTGGAAATTTTT+GGG - chr1_4:52504178-52504197 Msa0169290:intron 20.0%
!!! CTCTGTATTAAGTTTTTAAT+AGG - chr1_4:52504784-52504803 Msa0169290:CDS 20.0%
!!! TTAATCATGTACAATACTTT+TGG - chr1_4:52504921-52504940 Msa0169290:CDS 20.0%
!! AACAACACAAATTCAAATTA+CGG + chr1_4:52505237-52505256 None:intergenic 20.0%
!!! TGTTTCATTTTCTATTTTGT+TGG - chr1_4:52505434-52505453 Msa0169290:intron 20.0%
!!! CTTTGCTTTAAAATGATTTT+TGG + chr1_4:52505635-52505654 None:intergenic 20.0%
!!! CAAAAATCATTTTAAAGCAA+AGG - chr1_4:52505633-52505652 Msa0169290:intron 20.0%
!!! TAGTTTTTTTGAAAATTCAG+GGG + chr1_4:52505993-52506012 None:intergenic 20.0%
!!! CTTAGTTTTTTTGAAAATTC+AGG + chr1_4:52505995-52506014 None:intergenic 20.0%
!! CAAAATGTAGCAATAAATTT+GGG + chr1_4:52506755-52506774 None:intergenic 20.0%
!! ACAAAATGTAGCAATAAATT+TGG + chr1_4:52506756-52506775 None:intergenic 20.0%
!!! TTTTTTTTAATGCCAAATGT+TGG - chr1_4:52506872-52506891 Msa0169290:intron 20.0%
!! TAAAGAATGAATAAGATTCT+TGG - chr1_4:52507589-52507608 Msa0169290:intron 20.0%
!!! TAAATCAACTTTTTTTAGCA+AGG - chr1_4:52507810-52507829 Msa0169290:CDS 20.0%
!! TAAATATTCAAAACCTCAAA+GGG + chr1_4:52508047-52508066 None:intergenic 20.0%
!! ATAAATATTCAAAACCTCAA+AGG + chr1_4:52508048-52508067 None:intergenic 20.0%
!! TAGCATATATTTGAATTGAA+AGG + chr1_4:52508094-52508113 None:intergenic 20.0%
!!! GAAAAAAATGACAATTTTTG+GGG + chr1_4:52508257-52508276 None:intergenic 20.0%
!! AATCTGAAAAAATATCCATA+TGG + chr1_4:52508466-52508485 None:intergenic 20.0%
!!! ATTTTTGGTATTGCATAAAT+TGG - chr1_4:52508711-52508730 Msa0169290:intron 20.0%
!!! GTGTATTTATTTGATGATAA+AGG - chr1_4:52509475-52509494 Msa0169290:CDS 20.0%
!!! ATAAAGGAAAACAAGTTTTT+GGG - chr1_4:52509491-52509510 Msa0169290:CDS 20.0%
!!! TTTCACATTTGTTGATTCAT+AGG - chr1_4:52497832-52497851 Msa0169290:CDS 25.0%
!!! TTCACATTTGTTGATTCATA+GGG - chr1_4:52497833-52497852 Msa0169290:CDS 25.0%
! AAATCATAGGTAGATATTGT+AGG - chr1_4:52498201-52498220 Msa0169290:intron 25.0%
!! AATTGCCATTTAAAACGAAA+CGG - chr1_4:52498548-52498567 Msa0169290:CDS 25.0%
! CAGAATGTTAGAAATGAAAA+GGG + chr1_4:52498594-52498613 None:intergenic 25.0%
! TCAGAATGTTAGAAATGAAA+AGG + chr1_4:52498595-52498614 None:intergenic 25.0%
! ACAAGCTTGACAAATTAAAA+AGG + chr1_4:52498666-52498685 None:intergenic 25.0%
! TATTACTATTGTGAATTGTG+GGG - chr1_4:52498717-52498736 Msa0169290:intron 25.0%
! CAAGAATATACAAAACTTGT+TGG + chr1_4:52499005-52499024 None:intergenic 25.0%
!!! TTGTATTTTAGAGACAAGAA+AGG + chr1_4:52499048-52499067 None:intergenic 25.0%
!!! AGAAAGTTTTTTCTCTAAAC+AGG - chr1_4:52499295-52499314 Msa0169290:intron 25.0%
! TGATGAAAGTTTGATTAAAC+AGG - chr1_4:52499530-52499549 Msa0169290:intron 25.0%
! GATGAAAGTTTGATTAAACA+GGG - chr1_4:52499531-52499550 Msa0169290:intron 25.0%
!! CAAATTTTCTCAATAATGGT+TGG + chr1_4:52499597-52499616 None:intergenic 25.0%
! AAAGGGAATGATTTAAAGAT+TGG - chr1_4:52499861-52499880 Msa0169290:intron 25.0%
!!! AATGATTTAAAGATTGGTCT+AGG - chr1_4:52499867-52499886 Msa0169290:intron 25.0%
!! CTTATATTTTTCCCTAGTTT+CGG + chr1_4:52499903-52499922 None:intergenic 25.0%
! TAGAATGTAATTTCAGCAAA+AGG - chr1_4:52500077-52500096 Msa0169290:intron 25.0%
!!! CGGTAGAACTTTTTTTTTAA+TGG + chr1_4:52500126-52500145 None:intergenic 25.0%
! AACACTTATAGTAGAAAAGA+TGG - chr1_4:52500454-52500473 Msa0169290:intron 25.0%
! GTTATATCATAAACCATGTT+TGG + chr1_4:52500647-52500666 None:intergenic 25.0%
! AGTTTCATATTTGTGTAGTT+TGG + chr1_4:52501006-52501025 None:intergenic 25.0%
! ATGAGAAACTGTTCAAAATT+GGG + chr1_4:52501082-52501101 None:intergenic 25.0%
! TATGAGAAACTGTTCAAAAT+TGG + chr1_4:52501083-52501102 None:intergenic 25.0%
!! ATTTTGAACAGTTTCTCATA+TGG - chr1_4:52501083-52501102 Msa0169290:intron 25.0%
!! TTTTGAACAGTTTCTCATAT+GGG - chr1_4:52501084-52501103 Msa0169290:intron 25.0%
! TTGTCACAGAATAAATAACA+AGG + chr1_4:52501197-52501216 None:intergenic 25.0%
! TTGATTCATACAAATTTGAG+TGG - chr1_4:52501545-52501564 Msa0169290:intron 25.0%
!! AATCGACTTAATTATGATAC+TGG + chr1_4:52501590-52501609 None:intergenic 25.0%
!!! ATTAAGTCGATTTTTGTTAG+AGG - chr1_4:52501598-52501617 Msa0169290:CDS 25.0%
! ATAAGGGATAAAAAAGTTTC+GGG + chr1_4:52501748-52501767 None:intergenic 25.0%
! ATCCCTTATACCATTAAATT+TGG - chr1_4:52501759-52501778 Msa0169290:intron 25.0%
! CTTCCAAATTTAATGGTATA+AGG + chr1_4:52501765-52501784 None:intergenic 25.0%
! ATTTATCCGTCTCAAATAAA+TGG - chr1_4:52501791-52501810 Msa0169290:intron 25.0%
! AAAAAGCCATTTATTTGAGA+CGG + chr1_4:52501800-52501819 None:intergenic 25.0%
! CATATTATTCCACGAATATT+AGG + chr1_4:52502140-52502159 None:intergenic 25.0%
! CAAATGATAAGGATTATAGT+AGG - chr1_4:52502207-52502226 Msa0169290:intron 25.0%
!! ATTATACAAGACTTGTTCTT+TGG + chr1_4:52502243-52502262 None:intergenic 25.0%
! CAGATCTTTCAACAAATTAT+TGG + chr1_4:52502315-52502334 None:intergenic 25.0%
! AAACTCGAATAATGATTATG+TGG - chr1_4:52502767-52502786 Msa0169290:intron 25.0%
! AACTCGAATAATGATTATGT+GGG - chr1_4:52502768-52502787 Msa0169290:intron 25.0%
! AGATCTTCATTATTCTGATA+AGG - chr1_4:52502943-52502962 Msa0169290:intron 25.0%
!!! GTACTAGTCTATTTTTTTCT+TGG - chr1_4:52502982-52503001 Msa0169290:intron 25.0%
!! ATGATTTTGCTTCATTTACA+GGG - chr1_4:52503082-52503101 Msa0169290:CDS 25.0%
! AATTTAAGTAAAATGCAGAC+TGG + chr1_4:52503355-52503374 None:intergenic 25.0%
! TACTTAAATTATGTGCTTGT+TGG - chr1_4:52503365-52503384 Msa0169290:CDS 25.0%
! ACTTAAATTATGTGCTTGTT+GGG - chr1_4:52503366-52503385 Msa0169290:CDS 25.0%
! TTCAAATAGAAATGCTAAGA+TGG - chr1_4:52503570-52503589 Msa0169290:CDS 25.0%
! GATTATTATTTGTAGGATGT+TGG - chr1_4:52503600-52503619 Msa0169290:intron 25.0%
!! CATGGACTATCAATAAATAA+AGG + chr1_4:52503930-52503949 None:intergenic 25.0%
!! GTGTTAAATGTGGAAATTTT+TGG - chr1_4:52504177-52504196 Msa0169290:intron 25.0%
!!! TATTTTAAGAAATGCGACAT+TGG + chr1_4:52504227-52504246 None:intergenic 25.0%
!! CTGAATCAGTATATTTCTTT+TGG - chr1_4:52504248-52504267 Msa0169290:intron 25.0%
! ATTCAAAATGGTGGTATTTA+GGG - chr1_4:52504552-52504571 Msa0169290:intron 25.0%
! ATTTAGGGAGTAAATAAACT+CGG - chr1_4:52504567-52504586 Msa0169290:intron 25.0%
!! AAGTTTTTAATAGGATAGGA+TGG - chr1_4:52504793-52504812 Msa0169290:CDS 25.0%
!!! TTGTGATTTTAGTCATTATG+TGG - chr1_4:52504868-52504887 Msa0169290:CDS 25.0%
!!! AATTTTGAGGTTATCTTTAC+AGG - chr1_4:52504981-52505000 Msa0169290:CDS 25.0%
! TAATAAAAAAACCAGGAACA+GGG - chr1_4:52505005-52505024 Msa0169290:CDS 25.0%
! CCATGATAAAAAATTGATAG+AGG + chr1_4:52505098-52505117 None:intergenic 25.0%
!!! CCTCTATCAATTTTTTATCA+TGG - chr1_4:52505095-52505114 Msa0169290:intron 25.0%
! ATATCATCTTGTACTCTTAT+TGG - chr1_4:52505175-52505194 Msa0169290:CDS 25.0%
! ATAGAAAATGAAACAAACCT+TGG + chr1_4:52505429-52505448 None:intergenic 25.0%
! GAAGACAGGTATTTAATTAA+GGG + chr1_4:52505497-52505516 None:intergenic 25.0%
! AGAAGACAGGTATTTAATTA+AGG + chr1_4:52505498-52505517 None:intergenic 25.0%
! AACCTTTAATAAACCAAGAT+TGG + chr1_4:52505530-52505549 None:intergenic 25.0%
!!! TTTCATTGATTTGTTGAGTA+TGG - chr1_4:52505705-52505724 Msa0169290:intron 25.0%
!!! TTTTCAGGTTAAACTTCTTT+TGG - chr1_4:52505779-52505798 Msa0169290:intron 25.0%
!!! TTTCAGGTTAAACTTCTTTT+GGG - chr1_4:52505780-52505799 Msa0169290:intron 25.0%
! TTTAGGCTAAAATATGCATT+TGG - chr1_4:52505916-52505935 Msa0169290:intron 25.0%
! ATTTAGATCTGGAAATTTGT+GGG + chr1_4:52506233-52506252 None:intergenic 25.0%
! AATTAATCAAAATCCAGATC+TGG - chr1_4:52506360-52506379 Msa0169290:intron 25.0%
! ATTAATCAAAATCCAGATCT+GGG - chr1_4:52506361-52506380 Msa0169290:intron 25.0%
! TTGAAAGAGAACAAATTCTA+TGG - chr1_4:52506387-52506406 Msa0169290:intron 25.0%
! TGAAAGAGAACAAATTCTAT+GGG - chr1_4:52506388-52506407 Msa0169290:intron 25.0%
! TTGTATTAAAGAAGCTGATT+GGG + chr1_4:52506434-52506453 None:intergenic 25.0%
! TTTGTATTAAAGAAGCTGAT+TGG + chr1_4:52506435-52506454 None:intergenic 25.0%
!! TTTTTATATCAGACCTATGT+TGG - chr1_4:52506718-52506737 Msa0169290:intron 25.0%
! AACAACTAATTACCAACATT+TGG + chr1_4:52506887-52506906 None:intergenic 25.0%
! TCTAGATCTAGATCTTAAAA+AGG + chr1_4:52507004-52507023 None:intergenic 25.0%
! CTCATCATAGAAAATAATAG+TGG - chr1_4:52507474-52507493 Msa0169290:CDS 25.0%
! TTAATCAAAAAATGCTGATG+TGG + chr1_4:52507739-52507758 None:intergenic 25.0%
! TGATTAAAAAGAACACATCA+AGG - chr1_4:52507752-52507771 Msa0169290:CDS 25.0%
! AAATGGCTAAAATATGCATT+TGG + chr1_4:52507837-52507856 None:intergenic 25.0%
! ATAAATACAAGATCATTACC+TGG + chr1_4:52507983-52508002 None:intergenic 25.0%
! AATAAATAGCTATGCCAAAA+TGG - chr1_4:52508160-52508179 Msa0169290:CDS 25.0%
!! CCAAACTTAAAAAACCATTT+TGG + chr1_4:52508177-52508196 None:intergenic 25.0%
!!! CCAAAATGGTTTTTTAAGTT+TGG - chr1_4:52508174-52508193 Msa0169290:CDS 25.0%
!!! TTCTAAATTTTGAAAGTGAC+AGG - chr1_4:52508277-52508296 Msa0169290:intron 25.0%
!! AACAATGTGATATCTTTTTC+AGG - chr1_4:52508426-52508445 Msa0169290:intron 25.0%
!!! GCTTCCTATCTTTTTATTTT+TGG - chr1_4:52508696-52508715 Msa0169290:intron 25.0%
! TCTACACTTTATTCTATAGT+AGG + chr1_4:52508786-52508805 None:intergenic 25.0%
!!! ATTGTTTTTTAGTCTCATCT+TGG + chr1_4:52508855-52508874 None:intergenic 25.0%
! CTAAAAAGAACTCAAAAGAA+AGG - chr1_4:52509397-52509416 Msa0169290:CDS 25.0%
!! GATAAAGGAAAACAAGTTTT+TGG - chr1_4:52509490-52509509 Msa0169290:CDS 25.0%
TGAATTGCATATATCATCGT+TGG + chr1_4:52497478-52497497 None:intergenic 30.0%
AATTCACGAATTGTTACCTT+CGG + chr1_4:52497927-52497946 None:intergenic 30.0%
AGCTATACAAATGTGAAACT+AGG - chr1_4:52498123-52498142 Msa0169290:CDS 30.0%
GCTATACAAATGTGAAACTA+GGG - chr1_4:52498124-52498143 Msa0169290:CDS 30.0%
CAAAATTGCATCTCAATTTC+AGG + chr1_4:52498312-52498331 None:intergenic 30.0%
TAACAATGTCCTATAGACTA+TGG + chr1_4:52498356-52498375 None:intergenic 30.0%
TGTAGAACTTGTATTAGGAT+AGG + chr1_4:52498422-52498441 None:intergenic 30.0%
TTGAAGATTGTATACTAGAC+CGG + chr1_4:52498466-52498485 None:intergenic 30.0%
GTTCGTGTATTATTGTATTG+TGG - chr1_4:52498688-52498707 Msa0169290:intron 30.0%
ATTACTATTGTGAATTGTGG+GGG - chr1_4:52498718-52498737 Msa0169290:intron 30.0%
GAAAGTTTATCAAGACATTG+CGG + chr1_4:52498837-52498856 None:intergenic 30.0%
!! AAATGATGATGATGGAACTA+AGG - chr1_4:52498942-52498961 Msa0169290:intron 30.0%
!! AATGATGATGATGGAACTAA+GGG - chr1_4:52498943-52498962 Msa0169290:intron 30.0%
!! ATTTTAGAGACAAGAAAGGA+AGG + chr1_4:52499044-52499063 None:intergenic 30.0%
! TTTGAAGTGGTTAAGAATGT+TGG + chr1_4:52499073-52499092 None:intergenic 30.0%
TTGAGATCATTAAAGACACT+AGG + chr1_4:52499342-52499361 None:intergenic 30.0%
AGTGTCTTTAATGATCTCAA+AGG - chr1_4:52499342-52499361 Msa0169290:intron 30.0%
!!! GTTACTTGTTTTGACAACTA+TGG - chr1_4:52499401-52499420 Msa0169290:intron 30.0%
AGATAACTTTGGATGAATCA+AGG - chr1_4:52499562-52499581 Msa0169290:intron 30.0%
TCCTCTATGTTTCACAAATT+AGG - chr1_4:52499684-52499703 Msa0169290:intron 30.0%
! ACCTAATTTGTGAAACATAG+AGG + chr1_4:52499688-52499707 None:intergenic 30.0%
!!! TTTTTTTTAATGGCACTCTG+AGG + chr1_4:52500116-52500135 None:intergenic 30.0%
GTAAATCATCGTATTCAATC+TGG - chr1_4:52500180-52500199 Msa0169290:intron 30.0%
TATCGCATAAAAAACACTTG+AGG + chr1_4:52500234-52500253 None:intergenic 30.0%
! AATTTTTCCTTCAACTTGAG+CGG + chr1_4:52500265-52500284 None:intergenic 30.0%
TGCTATGCTTTACTTTATTC+TGG + chr1_4:52500354-52500373 None:intergenic 30.0%
ACTTATAGTAGAAAAGATGG+TGG - chr1_4:52500457-52500476 Msa0169290:intron 30.0%
!! TAGAAAAGATGGTGGAAAAT+AGG - chr1_4:52500465-52500484 Msa0169290:intron 30.0%
CTCTTTACTATCAAATCTAC+AGG + chr1_4:52500521-52500540 None:intergenic 30.0%
! TAATGAGTTGAATCCAAACA+TGG - chr1_4:52500631-52500650 Msa0169290:intron 30.0%
ATTACTGCTATAATCAATGC+AGG - chr1_4:52500852-52500871 Msa0169290:intron 30.0%
AGTATACCTCTCATAAAGTA+AGG + chr1_4:52500888-52500907 None:intergenic 30.0%
! CTAAAGGGAAAATTTTCATC+AGG + chr1_4:52500939-52500958 None:intergenic 30.0%
! CTGATGAAAATTTTCCCTTT+AGG - chr1_4:52500937-52500956 Msa0169290:intron 30.0%
!! AAATTTTCCCTTTAGGAAAC+AGG - chr1_4:52500944-52500963 Msa0169290:intron 30.0%
TGAGAAACTGTTCAAAATTG+GGG + chr1_4:52501081-52501100 None:intergenic 30.0%
AATACATTCAACTCTGTTAC+AGG + chr1_4:52501114-52501133 None:intergenic 30.0%
TATTTATTCTGTGACAAGTC+TGG - chr1_4:52501200-52501219 Msa0169290:intron 30.0%
ATTTATTCTGTGACAAGTCT+GGG - chr1_4:52501201-52501220 Msa0169290:intron 30.0%
TACAAATTTGAGTGGTTTCT+TGG - chr1_4:52501553-52501572 Msa0169290:intron 30.0%
TCTTCAGCTTCCAAATTTAA+TGG + chr1_4:52501772-52501791 None:intergenic 30.0%
!! GCGTCTAAAATATTTTACAG+AGG - chr1_4:52501849-52501868 Msa0169290:intron 30.0%
!!! TGCACTGTTATTTTTCTTCA+TGG - chr1_4:52501940-52501959 Msa0169290:CDS 30.0%
GAAGGATAGTTACAAAATGA+AGG + chr1_4:52502056-52502075 None:intergenic 30.0%
AAAGAAGAACCTAATATTCG+TGG - chr1_4:52502128-52502147 Msa0169290:intron 30.0%
TAGACAAAACAAGAACATTC+AGG - chr1_4:52502181-52502200 Msa0169290:intron 30.0%
CATTCAGGATTCAAATGATA+AGG - chr1_4:52502196-52502215 Msa0169290:intron 30.0%
! CATCATCTTTTGTAGATTTC+AGG + chr1_4:52502349-52502368 None:intergenic 30.0%
CTGAAATCTACAAAAGATGA+TGG - chr1_4:52502347-52502366 Msa0169290:intron 30.0%
! AAATCTACAAAAGATGATGG+TGG - chr1_4:52502350-52502369 Msa0169290:intron 30.0%
! TCGATATTTCTTTAGAGAGA+GGG + chr1_4:52502735-52502754 None:intergenic 30.0%
! ATCGATATTTCTTTAGAGAG+AGG + chr1_4:52502736-52502755 None:intergenic 30.0%
TCAGAATAATGAAGATCTGT+CGG + chr1_4:52502941-52502960 None:intergenic 30.0%
! GATGATTTTGCTTCATTTAC+AGG - chr1_4:52503081-52503100 Msa0169290:CDS 30.0%
! ATGAATTTCTTTTCATCCCA+GGG - chr1_4:52503404-52503423 Msa0169290:intron 30.0%
! GCAGAAATGTTTTTCTAACA+TGG + chr1_4:52503774-52503793 None:intergenic 30.0%
AATAAAGGCAATCAAGTCTA+TGG + chr1_4:52503915-52503934 None:intergenic 30.0%
!! AAATCAAAGGTATCCAAAGT+TGG - chr1_4:52503994-52504013 Msa0169290:intron 30.0%
!! AATCAAAGGTATCCAAAGTT+GGG - chr1_4:52503995-52504014 Msa0169290:intron 30.0%
CAACTATAAATGGACATATC+AGG + chr1_4:52504390-52504409 None:intergenic 30.0%
CCATTGCTTACAACTATAAA+TGG + chr1_4:52504400-52504419 None:intergenic 30.0%
CCATTTATAGTTGTAAGCAA+TGG - chr1_4:52504397-52504416 Msa0169290:intron 30.0%
CATTCAAAATGGTGGTATTT+AGG - chr1_4:52504551-52504570 Msa0169290:intron 30.0%
TTTAGGGAGTAAATAAACTC+GGG - chr1_4:52504568-52504587 Msa0169290:intron 30.0%
AATCAAAAGTGATATGTGCT+TGG + chr1_4:52504679-52504698 None:intergenic 30.0%
TGTGGATATAATGTTCAGAA+AGG - chr1_4:52504886-52504905 Msa0169290:CDS 30.0%
TACAGGCTAATAAAAAAACC+AGG - chr1_4:52504998-52505017 Msa0169290:CDS 30.0%
CTAATAAAAAAACCAGGAAC+AGG - chr1_4:52505004-52505023 Msa0169290:CDS 30.0%
! ATTCAAATTACGGTTGGTAT+GGG + chr1_4:52505227-52505246 None:intergenic 30.0%
! AATTCAAATTACGGTTGGTA+TGG + chr1_4:52505228-52505247 None:intergenic 30.0%
ACACAAATTCAAATTACGGT+TGG + chr1_4:52505233-52505252 None:intergenic 30.0%
AAAGAACAAAGAGATTACCA+AGG - chr1_4:52505409-52505428 Msa0169290:intron 30.0%
! ACCAGAATCAAATTCTTTTC+AGG - chr1_4:52505764-52505783 Msa0169290:intron 30.0%
ACCTGAAAAGAATTTGATTC+TGG + chr1_4:52505768-52505787 None:intergenic 30.0%
AAAAACTAAGCAAGTCCTTA+AGG - chr1_4:52506005-52506024 Msa0169290:intron 30.0%
TCAGCTAAAATTTCACCTTA+AGG + chr1_4:52506023-52506042 None:intergenic 30.0%
!!! AGGTGAAATTTTAGCTGATT+TGG - chr1_4:52506025-52506044 Msa0169290:intron 30.0%
TTGGCCAATTTAAACTTATG+CGG - chr1_4:52506044-52506063 Msa0169290:intron 30.0%
TTTAGATCTGGAAATTTGTG+GGG + chr1_4:52506232-52506251 None:intergenic 30.0%
GATTTAGATCTGGAAATTTG+TGG + chr1_4:52506234-52506253 None:intergenic 30.0%
TTGACTAATTCGATTGACAA+AGG + chr1_4:52506261-52506280 None:intergenic 30.0%
AACAATGTTCATGAAGATTC+GGG + chr1_4:52506518-52506537 None:intergenic 30.0%
CAACAATGTTCATGAAGATT+CGG + chr1_4:52506519-52506538 None:intergenic 30.0%
AAATAAGTTCACCAATGAGT+TGG + chr1_4:52506700-52506719 None:intergenic 30.0%
ATGTATGGATGAAGAAGAAT+GGG + chr1_4:52506799-52506818 None:intergenic 30.0%
AATGTATGGATGAAGAAGAA+TGG + chr1_4:52506800-52506819 None:intergenic 30.0%
!! CTCTCATTTATTCGTTTTTG+GGG + chr1_4:52506839-52506858 None:intergenic 30.0%
!! GCTCTCATTTATTCGTTTTT+GGG + chr1_4:52506840-52506859 None:intergenic 30.0%
TCTAGATCTTAAAAAGGCTT+GGG + chr1_4:52506998-52507017 None:intergenic 30.0%
ATCTAGATCTTAAAAAGGCT+TGG + chr1_4:52506999-52507018 None:intergenic 30.0%
!! GTGATGTTTTTACTGAAATC+AGG - chr1_4:52507297-52507316 Msa0169290:intron 30.0%
!! TGTTTTTACTGAAATCAGGA+AGG - chr1_4:52507301-52507320 Msa0169290:intron 30.0%
TAAAGTTTGCAGAAAATGCA+TGG + chr1_4:52507405-52507424 None:intergenic 30.0%
AGATGACAACAAGAATTCAT+TGG + chr1_4:52507456-52507475 None:intergenic 30.0%
ATTACAATCTCAGAGATAGA+TGG - chr1_4:52507543-52507562 Msa0169290:CDS 30.0%
TCCATTTGTAAAACAGATCA+AGG - chr1_4:52507888-52507907 Msa0169290:CDS 30.0%
! TCCTTGATCTGTTTTACAAA+TGG + chr1_4:52507892-52507911 None:intergenic 30.0%
TTGTAAAACAGATCAAGGAA+CGG - chr1_4:52507893-52507912 Msa0169290:CDS 30.0%
! TAAAAGTACAAGACTAACCA+TGG + chr1_4:52508316-52508335 None:intergenic 30.0%
AGTTGTATCTTGAATTGCAT+TGG - chr1_4:52508403-52508422 Msa0169290:intron 30.0%
! ATTCATCGCATGAATTTTGT+TGG - chr1_4:52508619-52508638 Msa0169290:intron 30.0%
TATAAATGGAGTCGTTATTC+TGG - chr1_4:52508663-52508682 Msa0169290:intron 30.0%
CTTTATTCTATAGTAGGTTC+TGG + chr1_4:52508780-52508799 None:intergenic 30.0%
TTAGATCTGAGAATCTCAAA+AGG - chr1_4:52508951-52508970 Msa0169290:intron 30.0%
CTGTGGTAAATATGACAAAA+AGG - chr1_4:52509326-52509345 Msa0169290:CDS 30.0%
AATATGACAAAAAGGCTTGA+AGG - chr1_4:52509334-52509353 Msa0169290:CDS 30.0%
TATCGTATATTATTTGCAGC+CGG - chr1_4:52509565-52509584 Msa0169290:CDS 30.0%
TTCATAGGGATAGTGTTCAT+TGG - chr1_4:52497847-52497866 Msa0169290:CDS 35.0%
AATCTGATGGTTACTGTTAC+TGG - chr1_4:52498099-52498118 Msa0169290:CDS 35.0%
ATCTGATGGTTACTGTTACT+GGG - chr1_4:52498100-52498119 Msa0169290:CDS 35.0%
TTACACTTTACTCGCTTTAG+AGG - chr1_4:52498278-52498297 Msa0169290:intron 35.0%
TGCATCTCAATTTCAGGATT+TGG + chr1_4:52498306-52498325 None:intergenic 35.0%
GTGCATATACCATAGTCTAT+AGG - chr1_4:52498344-52498363 Msa0169290:intron 35.0%
AGCAGTGTAGAACTTGTATT+AGG + chr1_4:52498427-52498446 None:intergenic 35.0%
!! GTTCTACACTGCTTTTGTTT+TGG - chr1_4:52498434-52498453 Msa0169290:CDS 35.0%
!!! ACACTGCTTTTGTTTTGGTT+TGG - chr1_4:52498439-52498458 Msa0169290:CDS 35.0%
TCTTCAACTTCCATCATCAT+TGG - chr1_4:52498479-52498498 Msa0169290:CDS 35.0%
!! CTAGACCGTTTCGTTTTAAA+TGG + chr1_4:52498556-52498575 None:intergenic 35.0%
! CATTTAAAACGAAACGGTCT+AGG - chr1_4:52498554-52498573 Msa0169290:CDS 35.0%
TATTAGCATCTGCAAGTGAA+GGG - chr1_4:52498869-52498888 Msa0169290:intron 35.0%
! GCAAATGCAAATGATGATGA+TGG - chr1_4:52498934-52498953 Msa0169290:intron 35.0%
AAGTTTGATTAAACAGGGAG+TGG - chr1_4:52499536-52499555 Msa0169290:intron 35.0%
CAGCATAGTGATAATCAAGT+AGG + chr1_4:52499635-52499654 None:intergenic 35.0%
! ATTATCACTATGCTGCTTCT+TGG - chr1_4:52499640-52499659 Msa0169290:intron 35.0%
! TTATCACTATGCTGCTTCTT+GGG - chr1_4:52499641-52499660 Msa0169290:intron 35.0%
GTGTAAAAATGCCGAAACTA+GGG - chr1_4:52499889-52499908 Msa0169290:intron 35.0%
CTATCTTGCTTCTACTTAGA+TGG + chr1_4:52500051-52500070 None:intergenic 35.0%
TACAACTTGAGTGGTAACTT+GGG + chr1_4:52500163-52500182 None:intergenic 35.0%
TTACAACTTGAGTGGTAACT+TGG + chr1_4:52500164-52500183 None:intergenic 35.0%
ACGATGATTTACAACTTGAG+TGG + chr1_4:52500172-52500191 None:intergenic 35.0%
GCTTTACTTTATTCTGGTGT+TGG + chr1_4:52500348-52500367 None:intergenic 35.0%
ACAACATTAGAGAGTGAGTT+GGG - chr1_4:52500429-52500448 Msa0169290:intron 35.0%
AAAATAGGCTTAGGTGGTTT+GGG - chr1_4:52500480-52500499 Msa0169290:intron 35.0%
AGTAAAGAGAGTAGATCAGA+TGG - chr1_4:52500532-52500551 Msa0169290:intron 35.0%
GAGGATAATCATATCACAAG+AGG - chr1_4:52500554-52500573 Msa0169290:intron 35.0%
AATCATATCACAAGAGGTAG+AGG - chr1_4:52500560-52500579 Msa0169290:intron 35.0%
AACTCTCCTTACTTTATGAG+AGG - chr1_4:52500879-52500898 Msa0169290:intron 35.0%
! GAGAGGTATACTCAAAAACA+TGG - chr1_4:52500896-52500915 Msa0169290:intron 35.0%
ATAGTGACCTGTTTCCTAAA+GGG + chr1_4:52500954-52500973 None:intergenic 35.0%
ACATGATTTCAAAAGCCGAT+AGG - chr1_4:52501158-52501177 Msa0169290:intron 35.0%
! TCGATTTTTGTTAGAGGATC+TGG - chr1_4:52501604-52501623 Msa0169290:CDS 35.0%
AGCTGCAAAATGTACAAAGT+AGG + chr1_4:52501975-52501994 None:intergenic 35.0%
ACACACTTGTTTACTCTTTG+TGG - chr1_4:52502021-52502040 Msa0169290:intron 35.0%
!! AAACTTTTAGCTGTGTCTGA+AGG + chr1_4:52502074-52502093 None:intergenic 35.0%
AGACACAGCTAAAAGTTTCA+AGG - chr1_4:52502076-52502095 Msa0169290:intron 35.0%
GGATTATAGTAGGCAAGATA+TGG - chr1_4:52502217-52502236 Msa0169290:intron 35.0%
CTTGTATAATTACTCGCAAC+AGG - chr1_4:52502253-52502272 Msa0169290:intron 35.0%
AGGTTGCAACAGAAAATTTG+AGG - chr1_4:52502273-52502292 Msa0169290:intron 35.0%
GGTTGCAACAGAAAATTTGA+GGG - chr1_4:52502274-52502293 Msa0169290:intron 35.0%
AATGCAGTATGCACTATAGT+TGG - chr1_4:52502396-52502415 Msa0169290:intron 35.0%
ATGCAGTATGCACTATAGTT+GGG - chr1_4:52502397-52502416 Msa0169290:intron 35.0%
! GATATTTCTTTAGAGAGAGG+GGG + chr1_4:52502733-52502752 None:intergenic 35.0%
! CGATATTTCTTTAGAGAGAG+GGG + chr1_4:52502734-52502753 None:intergenic 35.0%
CATCTACTCATGGATAACTA+AGG + chr1_4:52502822-52502841 None:intergenic 35.0%
ATATTCACAATTGAAGGACC+TGG + chr1_4:52502875-52502894 None:intergenic 35.0%
CTTCATTTACAGGGTACAAT+CGG - chr1_4:52503091-52503110 Msa0169290:CDS 35.0%
TTCTGAATCGTCTACTTTGT+TGG + chr1_4:52503203-52503222 None:intergenic 35.0%
! CATGAATTTCTTTTCATCCC+AGG - chr1_4:52503403-52503422 Msa0169290:intron 35.0%
ATATCTTTCGCATCTAATCC+AGG + chr1_4:52503462-52503481 None:intergenic 35.0%
AGTTTCCAAAATTCCTTGCA+AGG + chr1_4:52503545-52503564 None:intergenic 35.0%
! AGTTCTTTTGATCATGCTCA+AGG - chr1_4:52503647-52503666 Msa0169290:intron 35.0%
!! TTTTGTTTCATCGAAGCTTG+AGG - chr1_4:52503837-52503856 Msa0169290:CDS 35.0%
TTTCCTCACTGAGATAATAC+TGG - chr1_4:52504135-52504154 Msa0169290:intron 35.0%
!! TGAGATAATACTGGCTCTAA+AGG - chr1_4:52504144-52504163 Msa0169290:intron 35.0%
AGGTAATGCAGTGTTAAATG+TGG - chr1_4:52504167-52504186 Msa0169290:intron 35.0%
AAGAAATGCGACATTGGAAA+GGG + chr1_4:52504221-52504240 None:intergenic 35.0%
TAAGAAATGCGACATTGGAA+AGG + chr1_4:52504222-52504241 None:intergenic 35.0%
!!! ATATTTCTTTTGGCTCTGCT+CGG - chr1_4:52504258-52504277 Msa0169290:intron 35.0%
CCTAAAAAATGCGTGGAAAT+TGG + chr1_4:52504316-52504335 None:intergenic 35.0%
!!! CCAATTTCCACGCATTTTTT+AGG - chr1_4:52504313-52504332 Msa0169290:intron 35.0%
ATATCAGGAAATTCCCAGTT+AGG + chr1_4:52504375-52504394 None:intergenic 35.0%
CTTAGTGTCTTACATATGGT+GGG + chr1_4:52504498-52504517 None:intergenic 35.0%
TCTTAGTGTCTTACATATGG+TGG + chr1_4:52504499-52504518 None:intergenic 35.0%
GCATCTTAGTGTCTTACATA+TGG + chr1_4:52504502-52504521 None:intergenic 35.0%
GATGGTCACTATGAAATCAT+GGG + chr1_4:52504596-52504615 None:intergenic 35.0%
TGATGGTCACTATGAAATCA+TGG + chr1_4:52504597-52504616 None:intergenic 35.0%
ATTTCATAGTGACCATCAAG+CGG - chr1_4:52504599-52504618 Msa0169290:intron 35.0%
GTTCTCTACATAGTCTTCTA+AGG - chr1_4:52504624-52504643 Msa0169290:intron 35.0%
! GCTTGTGAAGTTAATTTGGA+TGG + chr1_4:52504947-52504966 None:intergenic 35.0%
GGAAGCTTGTGAAGTTAATT+TGG + chr1_4:52504951-52504970 None:intergenic 35.0%
GAGTACAAGATGATATCAAG+TGG + chr1_4:52505171-52505190 None:intergenic 35.0%
!!! TTGTGTTGTTTTGTGAGCTA+AGG - chr1_4:52505247-52505266 Msa0169290:CDS 35.0%
ACTGTTGCACTTATCATATG+TGG + chr1_4:52505299-52505318 None:intergenic 35.0%
ATGATAAGTGCAACAGTCAA+AGG - chr1_4:52505302-52505321 Msa0169290:intron 35.0%
!!! CTTTGTTCTTTTTTTCCAGC+AGG + chr1_4:52505400-52505419 None:intergenic 35.0%
GGTATTTAATTAAGGGCTCA+AGG + chr1_4:52505490-52505509 None:intergenic 35.0%
GGCCAATCTTGGTTTATTAA+AGG - chr1_4:52505525-52505544 Msa0169290:intron 35.0%
TGGTTGAGTGTTTGTTTAAG+TGG - chr1_4:52505599-52505618 Msa0169290:intron 35.0%
AGAAGTTTCATATGCTCTTC+AGG + chr1_4:52505852-52505871 None:intergenic 35.0%
TCAACAAACCTTGTGTATGT+TGG + chr1_4:52505877-52505896 None:intergenic 35.0%
CAAAACTCGCTATATTTGCA+AGG + chr1_4:52505943-52505962 None:intergenic 35.0%
! CTTGCAAATATAGCGAGTTT+TGG - chr1_4:52505941-52505960 Msa0169290:intron 35.0%
TGTGCCGCATAAGTTTAAAT+TGG + chr1_4:52506051-52506070 None:intergenic 35.0%
GGGTTAAAGATGAAGATTGA+TGG + chr1_4:52506190-52506209 None:intergenic 35.0%
TTAGATCTGGAAATTTGTGG+GGG + chr1_4:52506231-52506250 None:intergenic 35.0%
TTAAAGAAGCTGATTGGGAA+TGG + chr1_4:52506429-52506448 None:intergenic 35.0%
! ATAGTCTGAAACCAACTCAT+TGG - chr1_4:52506686-52506705 Msa0169290:intron 35.0%
GGTTATTGCAAAACCAACAT+AGG + chr1_4:52506734-52506753 None:intergenic 35.0%
!!! TTATTCGTTTTTGGGGTTCT+GGG + chr1_4:52506832-52506851 None:intergenic 35.0%
!!! TTTATTCGTTTTTGGGGTTC+TGG + chr1_4:52506833-52506852 None:intergenic 35.0%
! GGCTCTCATTTATTCGTTTT+TGG + chr1_4:52506841-52506860 None:intergenic 35.0%
!!! ATTAGTTTTTCTCCTTCGTC+TGG - chr1_4:52506909-52506928 Msa0169290:intron 35.0%
!! TTAGTTTTTCTCCTTCGTCT+GGG - chr1_4:52506910-52506929 Msa0169290:intron 35.0%
TAGATCTTAAAAAGGCTTGG+GGG + chr1_4:52506996-52507015 None:intergenic 35.0%
CTAGATCTTAAAAAGGCTTG+GGG + chr1_4:52506997-52507016 None:intergenic 35.0%
!!! CGACATTTTTTTGAAGAAGC+TGG + chr1_4:52507031-52507050 None:intergenic 35.0%
TCTAATGGCAAGGTAAATGA+AGG - chr1_4:52507508-52507527 Msa0169290:CDS 35.0%
TTTCTTCAGATTTAGCACCT+CGG + chr1_4:52507930-52507949 None:intergenic 35.0%
GTGCTAAATCTGAAGAAACT+AGG - chr1_4:52507932-52507951 Msa0169290:CDS 35.0%
TTTCAAAAGCAACTACATCC+AGG - chr1_4:52507962-52507981 Msa0169290:CDS 35.0%
TTCAATCACATAACCCTTTG+AGG - chr1_4:52508031-52508050 Msa0169290:CDS 35.0%
TGTCTTACAACAAAGCTTAG+TGG + chr1_4:52508204-52508223 None:intergenic 35.0%
TCAAGTATGTCACTCTAACA+TGG + chr1_4:52508234-52508253 None:intergenic 35.0%
!! ATGAAAGCTTTAGAAGTGCA+TGG + chr1_4:52508342-52508361 None:intergenic 35.0%
!!! TCTTTTTCAGGCAAAGTAGA+CGG - chr1_4:52508438-52508457 Msa0169290:intron 35.0%
TAAAAATTGTCTTGCCGTTC+AGG + chr1_4:52508523-52508542 None:intergenic 35.0%
!! AACGGCAAGACAATTTTTAG+CGG - chr1_4:52508524-52508543 Msa0169290:intron 35.0%
AAATCAGCAGTGTCTTCATT+TGG - chr1_4:52508569-52508588 Msa0169290:intron 35.0%
AATCAGCAGTGTCTTCATTT+GGG - chr1_4:52508570-52508589 Msa0169290:intron 35.0%
CTTCATTTGGGTAAAGCTTT+AGG - chr1_4:52508582-52508601 Msa0169290:intron 35.0%
!! GGATGGATTATTACTCATCA+AGG + chr1_4:52508744-52508763 None:intergenic 35.0%
AGAATCTCAAAAGGAAGTCA+AGG - chr1_4:52508960-52508979 Msa0169290:intron 35.0%
AGCTTGAACCTTATGCATAT+TGG - chr1_4:52509236-52509255 Msa0169290:CDS 35.0%
AAAGAACTCAAAAGAAAGGC+AGG - chr1_4:52509401-52509420 Msa0169290:CDS 35.0%
CACTAAATTACAGCAAACCA+TGG + chr1_4:52509458-52509477 None:intergenic 35.0%
! TTGTTAAAAGTGCGTCGATG+AGG + chr1_4:52497677-52497696 None:intergenic 40.0%
GGAGAAGAGAGAGTTTCTAT+CGG - chr1_4:52497740-52497759 Msa0169290:CDS 40.0%
TGTTATGTTGCCATCGAGTT+TGG - chr1_4:52497779-52497798 Msa0169290:CDS 40.0%
!! TCTTACTGATTCAAGACCGA+AGG - chr1_4:52497908-52497927 Msa0169290:CDS 40.0%
CAAATGTGAAACTAGGGATC+AGG - chr1_4:52498130-52498149 Msa0169290:CDS 40.0%
!!! GCTTTTGTTTTGGTTTGGTC+CGG - chr1_4:52498444-52498463 Msa0169290:CDS 40.0%
CAACTTCCATCATCATTGGT+CGG - chr1_4:52498483-52498502 Msa0169290:CDS 40.0%
CAAGACAGGCTGTAATAGTT+GGG - chr1_4:52498624-52498643 Msa0169290:intron 40.0%
AGGCTGTAATAGTTGGGAAT+GGG - chr1_4:52498630-52498649 Msa0169290:intron 40.0%
TTCTCTTCCAACAGGTAAGA+AGG - chr1_4:52498794-52498813 Msa0169290:intron 40.0%
CTATTAGCATCTGCAAGTGA+AGG - chr1_4:52498868-52498887 Msa0169290:intron 40.0%
ATTAGCATCTGCAAGTGAAG+GGG - chr1_4:52498870-52498889 Msa0169290:intron 40.0%
GGGTCAAAAACCTACTTGAA+AGG - chr1_4:52498890-52498909 Msa0169290:intron 40.0%
! GCAGTAGAAACCTTTCAAGT+AGG + chr1_4:52498903-52498922 None:intergenic 40.0%
ACTTGAAAGGTTTCTACTGC+TGG - chr1_4:52498903-52498922 Msa0169290:intron 40.0%
ATCATTTGCATTTGCTCCAC+CGG + chr1_4:52498929-52498948 None:intergenic 40.0%
AAGGGAGCAAATGAAAACGA+TGG - chr1_4:52498961-52498980 Msa0169290:intron 40.0%
GCAAATGAAAACGATGGTGA+TGG - chr1_4:52498967-52498986 Msa0169290:intron 40.0%
!! AAACGATGGTGATGGAACTA+AGG - chr1_4:52498975-52498994 Msa0169290:intron 40.0%
!! AACGATGGTGATGGAACTAA+GGG - chr1_4:52498976-52498995 Msa0169290:intron 40.0%
!! GAAAGGAAGGCATTCTTTCA+AGG + chr1_4:52499031-52499050 None:intergenic 40.0%
TCTCTGTCTTAACCCAACAT+CGG - chr1_4:52499152-52499171 Msa0169290:intron 40.0%
TAACACCTCAAGTAGTGCTT+CGG + chr1_4:52499187-52499206 None:intergenic 40.0%
ACCTCATCAACTGAGATTTC+TGG - chr1_4:52499228-52499247 Msa0169290:intron 40.0%
! TCCAGAAATCTCAGTTGATG+AGG + chr1_4:52499232-52499251 None:intergenic 40.0%
! TCAACTGAGATTTCTGGAGA+TGG - chr1_4:52499234-52499253 Msa0169290:intron 40.0%
TTTGGCATCTGAACATGAAG+AGG - chr1_4:52499458-52499477 Msa0169290:intron 40.0%
TTGGATGAATCAAGGATGTC+AGG - chr1_4:52499570-52499589 Msa0169290:intron 40.0%
GGTGTAAAAATGCCGAAACT+AGG - chr1_4:52499888-52499907 Msa0169290:intron 40.0%
AATCTGCAACGTCTCTTTCT+CGG + chr1_4:52499930-52499949 None:intergenic 40.0%
GCAGATTATGTAGTCATGCA+TGG - chr1_4:52499959-52499978 Msa0169290:intron 40.0%
AGTCAAAGGGGGAATTGAAT+GGG - chr1_4:52499984-52500003 Msa0169290:intron 40.0%
CTTGGGGTATGATATGATCT+CGG + chr1_4:52500146-52500165 None:intergenic 40.0%
ACAACTTGAGTGGTAACTTG+GGG + chr1_4:52500162-52500181 None:intergenic 40.0%
TGTTGTATGGAACAGAGTGT+TGG - chr1_4:52500311-52500330 Msa0169290:intron 40.0%
! GTTGTATGGAACAGAGTGTT+GGG - chr1_4:52500312-52500331 Msa0169290:intron 40.0%
AGTAAAGCATAGCAGAGATG+AGG - chr1_4:52500360-52500379 Msa0169290:intron 40.0%
GACAACATTAGAGAGTGAGT+TGG - chr1_4:52500428-52500447 Msa0169290:intron 40.0%
CAACATTAGAGAGTGAGTTG+GGG - chr1_4:52500430-52500449 Msa0169290:intron 40.0%
!! AGATGGTGGAAAATAGGCTT+AGG - chr1_4:52500471-52500490 Msa0169290:intron 40.0%
GAAAATAGGCTTAGGTGGTT+TGG - chr1_4:52500479-52500498 Msa0169290:intron 40.0%
AAAGAGAGTAGATCAGATGG+AGG - chr1_4:52500535-52500554 Msa0169290:intron 40.0%
GATAGTGACCTGTTTCCTAA+AGG + chr1_4:52500955-52500974 None:intergenic 40.0%
TTGATATGTTCTTTCCCAGC+AGG - chr1_4:52501047-52501066 Msa0169290:intron 40.0%
CTGTTCAAAATTGGGGCATA+TGG + chr1_4:52501074-52501093 None:intergenic 40.0%
! AACAGAAAATTTGAGGGCAC+TGG - chr1_4:52502280-52502299 Msa0169290:intron 40.0%
TAACTCCAAAGCCAAAATGC+TGG + chr1_4:52502614-52502633 None:intergenic 40.0%
TACTAGGAGTGAAGTGAGAT+CGG + chr1_4:52502666-52502685 None:intergenic 40.0%
TTGCTCAAGACATCTACTCA+TGG + chr1_4:52502832-52502851 None:intergenic 40.0%
!! AGCTTTAGAAGTGTTCAACC+AGG - chr1_4:52502854-52502873 Msa0169290:intron 40.0%
ACTGATTGAGACACGTCATT+TGG + chr1_4:52503247-52503266 None:intergenic 40.0%
! ATTATGTGCTTGTTGGGTGT+CGG - chr1_4:52503372-52503391 Msa0169290:CDS 40.0%
AGTAATAAAGCCAGCATTGC+AGG - chr1_4:52503497-52503516 Msa0169290:intron 40.0%
TAACATGGAACTAGCTCAGA+AGG + chr1_4:52503759-52503778 None:intergenic 40.0%
! TCTGCTTACTGTTTTCTCGT+TGG - chr1_4:52503789-52503808 Msa0169290:CDS 40.0%
TGGATGCAATAACCCAACTT+TGG + chr1_4:52504010-52504029 None:intergenic 40.0%
! CACAACAAAAGTGTGCATCA+AGG + chr1_4:52504042-52504061 None:intergenic 40.0%
! CTTGATGCACACTTTTGTTG+TGG - chr1_4:52504040-52504059 Msa0169290:intron 40.0%
ATCTCAGTGAGGAAAACTTC+TGG + chr1_4:52504130-52504149 None:intergenic 40.0%
!! GATAATACTGGCTCTAAAGG+AGG - chr1_4:52504147-52504166 Msa0169290:intron 40.0%
!!! TTCCACGCATTTTTTAGGTG+TGG - chr1_4:52504318-52504337 Msa0169290:intron 40.0%
!!! TCCACGCATTTTTTAGGTGT+GGG - chr1_4:52504319-52504338 Msa0169290:intron 40.0%
TTGCACATACAATAGCACAC+TGG - chr1_4:52504423-52504442 Msa0169290:intron 40.0%
TGCACATACAATAGCACACT+GGG - chr1_4:52504424-52504443 Msa0169290:intron 40.0%
ATACAATAGCACACTGGGTA+AGG - chr1_4:52504429-52504448 Msa0169290:intron 40.0%
!! CATATGGTGGGTACAAAAAC+AGG + chr1_4:52504486-52504505 None:intergenic 40.0%
TTTCATAGTGACCATCAAGC+GGG - chr1_4:52504600-52504619 Msa0169290:intron 40.0%
TGTCAATCATATGTGCATGC+TGG + chr1_4:52504652-52504671 None:intergenic 40.0%
! TCCAGACGTGCTAAATTTTG+AGG - chr1_4:52504968-52504987 Msa0169290:CDS 40.0%
ACCTCAAAATTTAGCACGTC+TGG + chr1_4:52504972-52504991 None:intergenic 40.0%
AATTTCATAAGCCCTGTTCC+TGG + chr1_4:52505019-52505038 None:intergenic 40.0%
GAACAGGGCTTATGAAATTC+TGG - chr1_4:52505020-52505039 Msa0169290:intron 40.0%
! TATGTGGAGTTTTCCCAACA+AGG + chr1_4:52505283-52505302 None:intergenic 40.0%
! TTTTTCCAGCAGGACAAATG+TGG + chr1_4:52505390-52505409 None:intergenic 40.0%
CAATCCTTCTGCTTGTGATT+TGG + chr1_4:52505560-52505579 None:intergenic 40.0%
AAGGATTGCAAATGCATCTG+AGG - chr1_4:52505572-52505591 Msa0169290:intron 40.0%
!! GTTGAGTATGGCTGTTGTTT+TGG - chr1_4:52505717-52505736 Msa0169290:intron 40.0%
! TTCAGGTAGGACAGCTTTAA+CGG + chr1_4:52505835-52505854 None:intergenic 40.0%
GTTTCATATGCTCTTCAGGT+AGG + chr1_4:52505848-52505867 None:intergenic 40.0%
ACTTCTGTCCAACATACACA+AGG - chr1_4:52505866-52505885 Msa0169290:intron 40.0%
GAAATTTGTGGGGGTGAATA+AGG + chr1_4:52506222-52506241 None:intergenic 40.0%
CAAAGGCAGTGATTTAGATC+TGG + chr1_4:52506244-52506263 None:intergenic 40.0%
!! ACCATCGTCAAAGCATTGAA+AGG - chr1_4:52506321-52506340 Msa0169290:intron 40.0%
!! CCATCGTCAAAGCATTGAAA+GGG - chr1_4:52506322-52506341 Msa0169290:intron 40.0%
TGTTAGTGAGATGTTGAGGA+GGG + chr1_4:52506661-52506680 None:intergenic 40.0%
ATGTTAGTGAGATGTTGAGG+AGG + chr1_4:52506662-52506681 None:intergenic 40.0%
CGAATGTTAGTGAGATGTTG+AGG + chr1_4:52506665-52506684 None:intergenic 40.0%
! AAGAAGAATGGGTCAGGTTT+TGG + chr1_4:52506788-52506807 None:intergenic 40.0%
CTGGGAGATCAAAGAATGTA+TGG + chr1_4:52506814-52506833 None:intergenic 40.0%
ATGAGAAATTGGAGGTCCTA+GGG + chr1_4:52506942-52506961 None:intergenic 40.0%
TGAGCTAAGGGATGAGAAAT+TGG + chr1_4:52506953-52506972 None:intergenic 40.0%
AGATCTTAAAAAGGCTTGGG+GGG + chr1_4:52506995-52507014 None:intergenic 40.0%
ACTACTAGCTGTTGTGATGA+GGG - chr1_4:52507105-52507124 Msa0169290:intron 40.0%
GTTGTGTGAAGTTCTGTTGA+GGG - chr1_4:52507150-52507169 Msa0169290:intron 40.0%
TTGTGTGAAGTTCTGTTGAG+GGG - chr1_4:52507151-52507170 Msa0169290:intron 40.0%
TAGCGAGGATAACACAATGT+AGG - chr1_4:52507229-52507248 Msa0169290:intron 40.0%
AGGAATTAACAAGACGGAAG+TGG - chr1_4:52507270-52507289 Msa0169290:intron 40.0%
GGAATTAACAAGACGGAAGT+GGG - chr1_4:52507271-52507290 Msa0169290:intron 40.0%
TTGACCAATTTGTGCAGATG+TGG + chr1_4:52507685-52507704 None:intergenic 40.0%
TCTGCACAAATTGGTCAACT+CGG - chr1_4:52507687-52507706 Msa0169290:CDS 40.0%
CAGGACATATACTAGTTCCA+TGG - chr1_4:52508296-52508315 Msa0169290:intron 40.0%
AGTGATGCAGAATACCTGAA+CGG - chr1_4:52508506-52508525 Msa0169290:intron 40.0%
!!! ACGGCAAGACAATTTTTAGC+GGG - chr1_4:52508525-52508544 Msa0169290:intron 40.0%
GGTATTGCATAAATTGGCAG+TGG - chr1_4:52508717-52508736 Msa0169290:intron 40.0%
TGTCATTGCTTGTTCCATCT+AGG - chr1_4:52508828-52508847 Msa0169290:intron 40.0%
CTGATTCAGACTATGATGCT+AGG - chr1_4:52509065-52509084 Msa0169290:intron 40.0%
CTTGCAGACAAATGACTATC+AGG + chr1_4:52509097-52509116 None:intergenic 40.0%
CTGATAGTCATTTGTCTGCA+AGG - chr1_4:52509095-52509114 Msa0169290:intron 40.0%
GAATATGCTAGCAGAAAAGC+TGG - chr1_4:52509190-52509209 Msa0169290:CDS 40.0%
AAGCTGGTGGAGATATTAAG+AGG - chr1_4:52509206-52509225 Msa0169290:CDS 40.0%
TGGTGGAGATATTAAGAGGA+AGG - chr1_4:52509210-52509229 Msa0169290:CDS 40.0%
TCAAGTGGCCAATATGCATA+AGG + chr1_4:52509247-52509266 None:intergenic 40.0%
ATGCATATTGGCCACTTGAT+CGG - chr1_4:52509248-52509267 Msa0169290:CDS 40.0%
! CTCATCATTTTCCGATCAAG+TGG + chr1_4:52509262-52509281 None:intergenic 40.0%
ATCGGAAAATGATGAGTCGT+CGG - chr1_4:52509266-52509285 Msa0169290:CDS 40.0%
! AAGAAAAGGTATGGCAACTG+TGG - chr1_4:52509309-52509328 Msa0169290:CDS 40.0%
! TTAAAAGTGCGTCGATGAGG+TGG + chr1_4:52497674-52497693 None:intergenic 45.0%
TTCTCCTTCAACACAGCAAC+GGG + chr1_4:52497726-52497745 None:intergenic 45.0%
CTTCTCCTTCAACACAGCAA+CGG + chr1_4:52497727-52497746 None:intergenic 45.0%
!! TTGGAGAGTGGTGTTGTTCA+TGG - chr1_4:52497798-52497817 Msa0169290:CDS 45.0%
TTCCATCATCATTGGTCGGT+TGG - chr1_4:52498487-52498506 Msa0169290:CDS 45.0%
GCAAGACAGGCTGTAATAGT+TGG - chr1_4:52498623-52498642 Msa0169290:intron 45.0%
CAGGCTGTAATAGTTGGGAA+TGG - chr1_4:52498629-52498648 Msa0169290:intron 45.0%
TATTGTGAATTGTGGGGGCA+AGG - chr1_4:52498723-52498742 Msa0169290:intron 45.0%
ATTGTGAATTGTGGGGGCAA+GGG - chr1_4:52498724-52498743 Msa0169290:intron 45.0%
! TAGACTGGTTCTCTTCCAAC+AGG - chr1_4:52498786-52498805 Msa0169290:intron 45.0%
GAGATTGCCTTCTTACCTGT+TGG + chr1_4:52498804-52498823 None:intergenic 45.0%
AACACCTCAAGTAGTGCTTC+GGG + chr1_4:52499186-52499205 None:intergenic 45.0%
GGGAGTGGATCAGATAACTT+TGG - chr1_4:52499551-52499570 Msa0169290:intron 45.0%
AGTCATGCATGGAGAGTCAA+AGG - chr1_4:52499970-52499989 Msa0169290:intron 45.0%
GTCATGCATGGAGAGTCAAA+GGG - chr1_4:52499971-52499990 Msa0169290:intron 45.0%
TCATGCATGGAGAGTCAAAG+GGG - chr1_4:52499972-52499991 Msa0169290:intron 45.0%
GAGTCAAAGGGGGAATTGAA+TGG - chr1_4:52499983-52500002 Msa0169290:intron 45.0%
GTCAAAGGGGGAATTGAATG+GGG - chr1_4:52499985-52500004 Msa0169290:intron 45.0%
GAGACTTGGAGACAAGTCTT+GGG - chr1_4:52500013-52500032 Msa0169290:intron 45.0%
TCGTATTCAATCTGGCCATC+TGG - chr1_4:52500188-52500207 Msa0169290:intron 45.0%
CGTATTCAATCTGGCCATCT+GGG - chr1_4:52500189-52500208 Msa0169290:intron 45.0%
CTCCATTTGAATCACCCAGA+TGG + chr1_4:52500206-52500225 None:intergenic 45.0%
!! GAAAGTACCGCTCAAGTTGA+AGG - chr1_4:52500255-52500274 Msa0169290:intron 45.0%
GTCAGATCAGCGATGTTGTA+TGG - chr1_4:52500298-52500317 Msa0169290:intron 45.0%
AGGATGTTGCGTTTGATGTG+TGG - chr1_4:52500380-52500399 Msa0169290:intron 45.0%
TGGTGGAAAATAGGCTTAGG+TGG - chr1_4:52500474-52500493 Msa0169290:intron 45.0%
!! ACTAAGTGGGATTGGCTACA+TGG + chr1_4:52500688-52500707 None:intergenic 45.0%
ATGTAGCCAATCCCACTTAG+TGG - chr1_4:52500687-52500706 Msa0169290:intron 45.0%
TGTAGCCAATCCCACTTAGT+GGG - chr1_4:52500688-52500707 Msa0169290:intron 45.0%
CTTATCCCACTAAGTGGGAT+TGG + chr1_4:52500696-52500715 None:intergenic 45.0%
CAATCCCACTTAGTGGGATA+AGG - chr1_4:52500694-52500713 Msa0169290:intron 45.0%
GGTTGTTACAGAACGCCTAT+CGG + chr1_4:52501176-52501195 None:intergenic 45.0%
TGCCTATGATTGAACGAGCA+AGG - chr1_4:52501878-52501897 Msa0169290:intron 45.0%
GCCTATGATTGAACGAGCAA+GGG - chr1_4:52501879-52501898 Msa0169290:intron 45.0%
TCCCTTGCTCGTTCAATCAT+AGG + chr1_4:52501883-52501902 None:intergenic 45.0%
! GGAGAAGGCTCAAAAGGTAT+TGG - chr1_4:52501900-52501919 Msa0169290:intron 45.0%
!! AGATGATGGTGGTTGTTTGC+AGG - chr1_4:52502361-52502380 Msa0169290:intron 45.0%
AAAGCCAAAATGCTGGCAAC+TGG + chr1_4:52502607-52502626 None:intergenic 45.0%
!!! AGTTGCCAGCATTTTGGCTT+TGG - chr1_4:52502606-52502625 Msa0169290:intron 45.0%
ACGTGTCTCAATCAGTTCTC+AGG - chr1_4:52503251-52503270 Msa0169290:intron 45.0%
CTTAGACAAACCTGCAATGC+TGG + chr1_4:52503510-52503529 None:intergenic 45.0%
!! TGTTGGTGTCATGCAGAAGA+AGG - chr1_4:52503617-52503636 Msa0169290:intron 45.0%
TATGGCGTTTGGCAGAAGAA+TGG + chr1_4:52503897-52503916 None:intergenic 45.0%
GCAATCAAGTCTATGGCGTT+TGG + chr1_4:52503908-52503927 None:intergenic 45.0%
AGTCCATGTCTTGAAGTCAG+AGG - chr1_4:52503942-52503961 Msa0169290:intron 45.0%
ATGCCTCTGACTTCAAGACA+TGG + chr1_4:52503948-52503967 None:intergenic 45.0%
GTGCATCAAGGTGACAAACA+TGG + chr1_4:52504030-52504049 None:intergenic 45.0%
TGTCGGCAGTACATAAGTTC+AGG + chr1_4:52504082-52504101 None:intergenic 45.0%
TGAACTTATGTACTGCCGAC+AGG - chr1_4:52504081-52504100 Msa0169290:intron 45.0%
GAGCCAGTATTATCTCAGTG+AGG + chr1_4:52504141-52504160 None:intergenic 45.0%
TCTGGCGTCAGTACATTTCT+TGG - chr1_4:52504286-52504305 Msa0169290:intron 45.0%
CTGGCGTCAGTACATTTCTT+GGG - chr1_4:52504287-52504306 Msa0169290:intron 45.0%
!!! CCACGCATTTTTTAGGTGTG+GGG - chr1_4:52504320-52504339 Msa0169290:intron 45.0%
!!! CACGCATTTTTTAGGTGTGG+GGG - chr1_4:52504321-52504340 Msa0169290:intron 45.0%
!!! CATTTTTTAGGTGTGGGGGT+GGG - chr1_4:52504325-52504344 Msa0169290:intron 45.0%
TCAACCTTCCTGATCCTAAC+TGG - chr1_4:52504358-52504377 Msa0169290:intron 45.0%
CAACCTTCCTGATCCTAACT+GGG - chr1_4:52504359-52504378 Msa0169290:intron 45.0%
ATTCCCAGTTAGGATCAGGA+AGG + chr1_4:52504365-52504384 None:intergenic 45.0%
GGAAATTCCCAGTTAGGATC+AGG + chr1_4:52504369-52504388 None:intergenic 45.0%
ACATTACTGTTGCATGCTGC+TGG - chr1_4:52504525-52504544 Msa0169290:intron 45.0%
GCTGCTGGCAACATTCAAAA+TGG - chr1_4:52504540-52504559 Msa0169290:intron 45.0%
GCTGGCAACATTCAAAATGG+TGG - chr1_4:52504543-52504562 Msa0169290:intron 45.0%
TGCCAGAGCAAACACAATAG+TGG + chr1_4:52504819-52504838 None:intergenic 45.0%
! AGTCAAAGGTTTAGCTCGCT+TGG - chr1_4:52505316-52505335 Msa0169290:intron 45.0%
!! TAAACCAAGATTGGCCTGCA+GGG + chr1_4:52505521-52505540 None:intergenic 45.0%
!! ATAAACCAAGATTGGCCTGC+AGG + chr1_4:52505522-52505541 None:intergenic 45.0%
GTAGCCAAATCACAAGCAGA+AGG - chr1_4:52505553-52505572 Msa0169290:intron 45.0%
GGAATGCTTATCACGAAGTG+TGG - chr1_4:52505801-52505820 Msa0169290:intron 45.0%
GCTTATCACGAAGTGTGGAT+TGG - chr1_4:52505806-52505825 Msa0169290:intron 45.0%
! ACTGTGTGAGTATTGCTGAC+TGG - chr1_4:52506076-52506095 Msa0169290:CDS 45.0%
! CTGTGTGAGTATTGCTGACT+GGG - chr1_4:52506077-52506096 Msa0169290:CDS 45.0%
GGTGAATAAGGAGACACTTG+GGG + chr1_4:52506210-52506229 None:intergenic 45.0%
GGGTGAATAAGGAGACACTT+GGG + chr1_4:52506211-52506230 None:intergenic 45.0%
GACGATGGTATGTGATAGCA+AGG + chr1_4:52506310-52506329 None:intergenic 45.0%
CCCTTTCAATGCTTTGACGA+TGG + chr1_4:52506325-52506344 None:intergenic 45.0%
TTTCTGGGTCTAGCTGAAGA+AGG + chr1_4:52506583-52506602 None:intergenic 45.0%
AGAAGGTTGTGCAGGTTTCT+GGG + chr1_4:52506598-52506617 None:intergenic 45.0%
TAGAAGGTTGTGCAGGTTTC+TGG + chr1_4:52506599-52506618 None:intergenic 45.0%
ATGTGGATAGAAGGTTGTGC+AGG + chr1_4:52506606-52506625 None:intergenic 45.0%
!! CTGTTGGTGATGTGGATAGA+AGG + chr1_4:52506615-52506634 None:intergenic 45.0%
AGGGGTTGGAGGAGAATTTA+GGG + chr1_4:52506642-52506661 None:intergenic 45.0%
GTTAGTGAGATGTTGAGGAG+GGG + chr1_4:52506660-52506679 None:intergenic 45.0%
TGGATGAAGAAGAATGGGTC+AGG + chr1_4:52506794-52506813 None:intergenic 45.0%
GATGAGAAATTGGAGGTCCT+AGG + chr1_4:52506943-52506962 None:intergenic 45.0%
GCTAAGGGATGAGAAATTGG+AGG + chr1_4:52506950-52506969 None:intergenic 45.0%
!! GCTCAACTGGTTTGAGCTAA+GGG + chr1_4:52506965-52506984 None:intergenic 45.0%
!! AGCTCAACTGGTTTGAGCTA+AGG + chr1_4:52506966-52506985 None:intergenic 45.0%
TTAAAAAGGCTTGGGGGGTT+GGG + chr1_4:52506990-52507009 None:intergenic 45.0%
CATGTCAGAATCTCTGTCCT+CGG - chr1_4:52507068-52507087 Msa0169290:intron 45.0%
CATCACAACAGCTAGTAGTC+AGG + chr1_4:52507104-52507123 None:intergenic 45.0%
GACTACTAGCTGTTGTGATG+AGG - chr1_4:52507104-52507123 Msa0169290:intron 45.0%
CGTTGTGTGAAGTTCTGTTG+AGG - chr1_4:52507149-52507168 Msa0169290:intron 45.0%
TGTGTGAAGTTCTGTTGAGG+GGG - chr1_4:52507152-52507171 Msa0169290:intron 45.0%
TGGGGGAGGAATTAACAAGA+CGG - chr1_4:52507264-52507283 Msa0169290:intron 45.0%
ATTAACAAGACGGAAGTGGG+TGG - chr1_4:52507274-52507293 Msa0169290:intron 45.0%
TTAACAAGACGGAAGTGGGT+GGG - chr1_4:52507275-52507294 Msa0169290:intron 45.0%
TCGAGACACCACAAACTTGA+GGG + chr1_4:52507329-52507348 None:intergenic 45.0%
AGTTTGTGGTGTCTCGAGTT+TGG - chr1_4:52507332-52507351 Msa0169290:CDS 45.0%
!! AGTTTGGCTCTCATCAAGTG+TGG - chr1_4:52507348-52507367 Msa0169290:CDS 45.0%
TGGAACAGCAAGAGAGAAGA+AGG + chr1_4:52507385-52507404 None:intergenic 45.0%
GTGGAGTGATGTGTGTCTAA+TGG - chr1_4:52507493-52507512 Msa0169290:CDS 45.0%
GTGATGTGTGTCTAATGGCA+AGG - chr1_4:52507498-52507517 Msa0169290:CDS 45.0%
AGTGCCACATCTGCACAAAT+TGG - chr1_4:52507678-52507697 Msa0169290:CDS 45.0%
AGATCAAGGAACGGAAAGAG+AGG - chr1_4:52507902-52507921 Msa0169290:CDS 45.0%
GCAAAGTAGACGGAACCATA+TGG - chr1_4:52508448-52508467 Msa0169290:intron 45.0%
!! GATTTTGATAGAGACAGCGC+CGG - chr1_4:52508482-52508501 Msa0169290:intron 45.0%
CAGGTATTCTGCATCACTAC+CGG + chr1_4:52508504-52508523 None:intergenic 45.0%
!!! CGGCAAGACAATTTTTAGCG+GGG - chr1_4:52508526-52508545 Msa0169290:intron 45.0%
!!! GGCAAGACAATTTTTAGCGG+GGG - chr1_4:52508527-52508546 Msa0169290:intron 45.0%
AGTCTCATCTTGGACCTAGA+TGG + chr1_4:52508845-52508864 None:intergenic 45.0%
GATTCGTCAGATAAGTGCTC+AGG + chr1_4:52508881-52508900 None:intergenic 45.0%
!! AGCCACTTGATTTGCTTGAC+CGG - chr1_4:52508909-52508928 Msa0169290:intron 45.0%
GTTTGATCATCCGTGAGGAA+GGG - chr1_4:52509020-52509039 Msa0169290:intron 45.0%
TTTGATCATCCGTGAGGAAG+GGG - chr1_4:52509021-52509040 Msa0169290:intron 45.0%
GCATCATAGTCTGAATCAGC+TGG + chr1_4:52509064-52509083 None:intergenic 45.0%
AGTCATTTGTCTGCAAGGTC+CGG - chr1_4:52509100-52509119 Msa0169290:intron 45.0%
TATGCTAGCAGAAAAGCTGG+TGG - chr1_4:52509193-52509212 Msa0169290:CDS 45.0%
GTAGCAGATTGATAGAGCCA+TGG - chr1_4:52509438-52509457 Msa0169290:CDS 45.0%
!!! TTTTGAATTATATTATATTA+TGG - chr1_4:52501132-52501151 Msa0169290:intron 5.0%
!! TATTATTATTATTATTTGTA+TGG - chr1_4:52501486-52501505 Msa0169290:intron 5.0%
!!! TATTTTAAAAGAATAATTAA+AGG + chr1_4:52506130-52506149 None:intergenic 5.0%
!! ACAGAGGTGTTGGTGGTTTG+CGG + chr1_4:52497529-52497548 None:intergenic 50.0%
! CTGTGACATTGCACCGATGA+CGG + chr1_4:52497553-52497572 None:intergenic 50.0%
ATGCGACAGGTGAAGAAGAG+AGG + chr1_4:52497593-52497612 None:intergenic 50.0%
GATTAGGTTCCTGTGCGATG+CGG + chr1_4:52497644-52497663 None:intergenic 50.0%
ATGAGGTGGATAGGGGGATT+AGG + chr1_4:52497660-52497679 None:intergenic 50.0%
AGTTCCCGTTGCTGTGTTGA+AGG - chr1_4:52497719-52497738 Msa0169290:CDS 50.0%
TTGCCATCGAGTTTGGAGAG+TGG - chr1_4:52497786-52497805 Msa0169290:CDS 50.0%
ACACCACTCTCCAAACTCGA+TGG + chr1_4:52497792-52497811 None:intergenic 50.0%
GACCAACCGACCAATGATGA+TGG + chr1_4:52498492-52498511 None:intergenic 50.0%
TCTGAGTTAGAGCGCAAGAC+AGG - chr1_4:52498610-52498629 Msa0169290:intron 50.0%
GAAAGGTTTCTACTGCTGGC+CGG - chr1_4:52498907-52498926 Msa0169290:intron 50.0%
GTTATGCGCCTTGTGACTAG+GGG + chr1_4:52499117-52499136 None:intergenic 50.0%
CGTTATGCGCCTTGTGACTA+GGG + chr1_4:52499118-52499137 None:intergenic 50.0%
CCTAGTCACAAGGCGCATAA+CGG - chr1_4:52499116-52499135 Msa0169290:intron 50.0%
ACACCTCAAGTAGTGCTTCG+GGG + chr1_4:52499185-52499204 None:intergenic 50.0%
CATGCATGGAGAGTCAAAGG+GGG - chr1_4:52499973-52499992 Msa0169290:intron 50.0%
GGAGACTTGGAGACAAGTCT+TGG - chr1_4:52500012-52500031 Msa0169290:intron 50.0%
GGCCATCTGGGTGATTCAAA+TGG - chr1_4:52500201-52500220 Msa0169290:intron 50.0%
!! GTATGGAACAGAGTGTTGGG+CGG - chr1_4:52500315-52500334 Msa0169290:intron 50.0%
! CCAGCCTTATCCCACTAAGT+GGG + chr1_4:52500701-52500720 None:intergenic 50.0%
! ACCAGCCTTATCCCACTAAG+TGG + chr1_4:52500702-52500721 None:intergenic 50.0%
TTGCAACAAGAGCTGACCCA+AGG + chr1_4:52501720-52501739 None:intergenic 50.0%
TGGGTCAGCTCTTGTTGCAA+TGG - chr1_4:52501720-52501739 Msa0169290:CDS 50.0%
GGGTCAGCTCTTGTTGCAAT+GGG - chr1_4:52501721-52501740 Msa0169290:CDS 50.0%
GATTGAACGAGCAAGGGAGA+AGG - chr1_4:52501885-52501904 Msa0169290:intron 50.0%
AGCAAGGGAGAAGGCTCAAA+AGG - chr1_4:52501894-52501913 Msa0169290:intron 50.0%
GAAAGCTGAAACGTGCACAC+TGG + chr1_4:52502554-52502573 None:intergenic 50.0%
! CTCACCAGTTGCCAGCATTT+TGG - chr1_4:52502600-52502619 Msa0169290:intron 50.0%
TGTGGGCTTGCAGAGCTTAT+TGG - chr1_4:52502785-52502804 Msa0169290:intron 50.0%
! TTTCTTTTCATCCCAGGGCG+CGG - chr1_4:52503409-52503428 Msa0169290:intron 50.0%
TTCGCAGCTTCATTGTTGCC+TGG - chr1_4:52503441-52503460 Msa0169290:intron 50.0%
GATATGTAGCGCTCCTTGCA+AGG - chr1_4:52503529-52503548 Msa0169290:CDS 50.0%
! GCGCTCCTTGCAAGGAATTT+TGG - chr1_4:52503537-52503556 Msa0169290:CDS 50.0%
TCGAAGCTTGAGGTTCTGCT+TGG - chr1_4:52503847-52503866 Msa0169290:CDS 50.0%
CGAAGCTTGAGGTTCTGCTT+GGG - chr1_4:52503848-52503867 Msa0169290:CDS 50.0%
TGAGGTTCTGCTTGGGCTTA+TGG - chr1_4:52503855-52503874 Msa0169290:CDS 50.0%
CGTTTGGCAGAAGAATGGCA+AGG + chr1_4:52503892-52503911 None:intergenic 50.0%
AGTGAGGAAAACTTCTGGCC+AGG + chr1_4:52504125-52504144 None:intergenic 50.0%
!! TGGCTCTGCTCGGTTTTATC+TGG - chr1_4:52504268-52504287 Msa0169290:intron 50.0%
CCCCACACCTAAAAAATGCG+TGG + chr1_4:52504323-52504342 None:intergenic 50.0%
!!! GCATTTTTTAGGTGTGGGGG+TGG - chr1_4:52504324-52504343 Msa0169290:intron 50.0%
GCACACTGGGTAAGGCAATT+AGG - chr1_4:52504437-52504456 Msa0169290:intron 50.0%
AGGTTCACAGCGTGTGAACA+TGG + chr1_4:52504466-52504485 None:intergenic 50.0%
TGTAGAGAACACCCGCTTGA+TGG + chr1_4:52504614-52504633 None:intergenic 50.0%
GGCCACTATTGTGTTTGCTC+TGG - chr1_4:52504814-52504833 Msa0169290:CDS 50.0%
CTCCTCGTCTACAAGTGCAT+GGG + chr1_4:52505055-52505074 None:intergenic 50.0%
TCTCCTCGTCTACAAGTGCA+TGG + chr1_4:52505056-52505075 None:intergenic 50.0%
TTGTAGACGAGGAGAGAGGT+GGG - chr1_4:52505061-52505080 Msa0169290:intron 50.0%
TTGTGAGCTAAGGTTGCTCG+CGG - chr1_4:52505257-52505276 Msa0169290:CDS 50.0%
TCCATCCACATTTGTCCTGC+TGG - chr1_4:52505382-52505401 Msa0169290:intron 50.0%
TCCAGCAGGACAAATGTGGA+TGG + chr1_4:52505386-52505405 None:intergenic 50.0%
AATACCTGTCTTCTCCCTGC+AGG - chr1_4:52505504-52505523 Msa0169290:intron 50.0%
GGGGTGAATAAGGAGACACT+TGG + chr1_4:52506212-52506231 None:intergenic 50.0%
! CTCTTTCAAGTGCCCAGATC+TGG + chr1_4:52506376-52506395 None:intergenic 50.0%
GAGAATTTAGGGGCTGCTGT+TGG + chr1_4:52506631-52506650 None:intergenic 50.0%
GGGGTTGGAGGAGAATTTAG+GGG + chr1_4:52506641-52506660 None:intergenic 50.0%
GAGGGGTTGGAGGAGAATTT+AGG + chr1_4:52506643-52506662 None:intergenic 50.0%
TAGGGTTCAAACCCAGACGA+AGG + chr1_4:52506924-52506943 None:intergenic 50.0%
TTCGTCTGGGTTTGAACCCT+AGG - chr1_4:52506923-52506942 Msa0169290:intron 50.0%
CTTAAAAAGGCTTGGGGGGT+TGG + chr1_4:52506991-52507010 None:intergenic 50.0%
AGTCAGGAACTGTGATTCCG+AGG + chr1_4:52507088-52507107 None:intergenic 50.0%
TTGTGATGAGGGCGAAGATC+AGG - chr1_4:52507116-52507135 Msa0169290:intron 50.0%
GTGTGAAGTTCTGTTGAGGG+GGG - chr1_4:52507153-52507172 Msa0169290:intron 50.0%
TGTGAAGTTCTGTTGAGGGG+GGG - chr1_4:52507154-52507173 Msa0169290:intron 50.0%
! GGTTAAGGAGCGTGAAGCAA+TGG - chr1_4:52507181-52507200 Msa0169290:intron 50.0%
GAGCGTGAAGCAATGGAGAT+GGG - chr1_4:52507188-52507207 Msa0169290:intron 50.0%
AGCGTGAAGCAATGGAGATG+GGG - chr1_4:52507189-52507208 Msa0169290:intron 50.0%
!! GGAAGGTACCCTCAAGTTTG+TGG - chr1_4:52507318-52507337 Msa0169290:intron 50.0%
CTCGAGACACCACAAACTTG+AGG + chr1_4:52507330-52507349 None:intergenic 50.0%
GTGGTCAATCTTTGCTGACG+TGG + chr1_4:52507720-52507739 None:intergenic 50.0%
CGTCTTGCACTTAGATGCAG+TGG - chr1_4:52508068-52508087 Msa0169290:CDS 50.0%
!! CACTGCTGATTTGAGATGCG+TGG + chr1_4:52508561-52508580 None:intergenic 50.0%
CTGGATGACTCATCACAGGA+TGG + chr1_4:52508761-52508780 None:intergenic 50.0%
!! GGTTCTGGATGACTCATCAC+AGG + chr1_4:52508765-52508784 None:intergenic 50.0%
TGCCGGTCAAGCAAATCAAG+TGG + chr1_4:52508914-52508933 None:intergenic 50.0%
TGCTTGACCGGCAGAAAGTA+AGG - chr1_4:52508921-52508940 Msa0169290:intron 50.0%
GAGCAGACCTTACTTTCTGC+CGG + chr1_4:52508931-52508950 None:intergenic 50.0%
GTCAAGGTCAGACGATGATG+AGG - chr1_4:52508976-52508995 Msa0169290:intron 50.0%
AAGGTCAGACGATGATGAGG+TGG - chr1_4:52508979-52508998 Msa0169290:intron 50.0%
GAGGTGGAGGTAGATTCTGA+AGG - chr1_4:52508995-52509014 Msa0169290:intron 50.0%
AGGACGTTTGATCATCCGTG+AGG - chr1_4:52509015-52509034 Msa0169290:intron 50.0%
CGTTTGATCATCCGTGAGGA+AGG - chr1_4:52509019-52509038 Msa0169290:intron 50.0%
TCGTTTGTTCCCCTTCCTCA+CGG + chr1_4:52509033-52509052 None:intergenic 50.0%
TCTGCAAGGTCCGGAACTAA+AGG - chr1_4:52509109-52509128 Msa0169290:intron 50.0%
! TCGCTTCTGGCCTTTAGTTC+CGG + chr1_4:52509122-52509141 None:intergenic 50.0%
CTGCTGTTCTTCTTCGCTTC+TGG + chr1_4:52509135-52509154 None:intergenic 50.0%
AAGAACAGCAGAGCCTGGTA+GGG - chr1_4:52509144-52509163 Msa0169290:CDS 50.0%
!! CTTGAAGGCAAGAGTGTCTC+TGG - chr1_4:52509349-52509368 Msa0169290:CDS 50.0%
CAACACCTCTGTGCCGTCAT+CGG - chr1_4:52497537-52497556 Msa0169290:three_prime_UTR 55.0%
CGTCATCGGTGCAATGTCAC+AGG - chr1_4:52497551-52497570 Msa0169290:three_prime_UTR 55.0%
! TGCGTCGATGAGGTGGATAG+GGG + chr1_4:52497667-52497686 None:intergenic 55.0%
! GTGCGTCGATGAGGTGGATA+GGG + chr1_4:52497668-52497687 None:intergenic 55.0%
! AGTGCGTCGATGAGGTGGAT+AGG + chr1_4:52497669-52497688 None:intergenic 55.0%
TGAATTGTGGGGGCAAGGGA+CGG - chr1_4:52498728-52498747 Msa0169290:intron 55.0%
TGGGTCAACCCCTAGTCACA+AGG - chr1_4:52499106-52499125 Msa0169290:intron 55.0%
CCGTTATGCGCCTTGTGACT+AGG + chr1_4:52499119-52499138 None:intergenic 55.0%
! GTCACAAGGCGCATAACGGA+TGG - chr1_4:52499120-52499139 Msa0169290:intron 55.0%
CGGGGGAAACTTCCGATGTT+GGG + chr1_4:52499167-52499186 None:intergenic 55.0%
TCGGGGGAAACTTCCGATGT+TGG + chr1_4:52499168-52499187 None:intergenic 55.0%
! TTCCCCCGAAGCACTACTTG+AGG - chr1_4:52499179-52499198 Msa0169290:intron 55.0%
CACCTCAAGTAGTGCTTCGG+GGG + chr1_4:52499184-52499203 None:intergenic 55.0%
ACTGCTCGCTTGCTTGATGC+TGG - chr1_4:52499267-52499286 Msa0169290:intron 55.0%
TGCCTCTGTGGCTGCAAGTA+TGG + chr1_4:52499484-52499503 None:intergenic 55.0%
CATGCTCTTGAGTGCCTCTG+TGG + chr1_4:52499496-52499515 None:intergenic 55.0%
!! TGAATGGGGCGTTGGAGACT+TGG - chr1_4:52499999-52500018 Msa0169290:intron 55.0%
! GCTTAGGTGGTTTGGGCATG+TGG - chr1_4:52500487-52500506 Msa0169290:intron 55.0%
CCCACTTAGTGGGATAAGGC+TGG - chr1_4:52500698-52500717 Msa0169290:intron 55.0%
TTGGGGCATATGGTCCTGCT+GGG + chr1_4:52501064-52501083 None:intergenic 55.0%
ATTGGGGCATATGGTCCTGC+TGG + chr1_4:52501065-52501084 None:intergenic 55.0%
TGCAGCTTCATGCGTGCCTT+GGG - chr1_4:52501701-52501720 Msa0169290:CDS 55.0%
AAATCAAGAAGCCGCGCCCT+GGG + chr1_4:52503423-52503442 None:intergenic 55.0%
!! TCGCCATCGACTCATCCTGT+CGG + chr1_4:52504099-52504118 None:intergenic 55.0%
ACAGGATGAGTCGATGGCGA+TGG - chr1_4:52504099-52504118 Msa0169290:intron 55.0%
TGCCCATGCACTTGTAGACG+AGG - chr1_4:52505050-52505069 Msa0169290:intron 55.0%
GCACTTGTAGACGAGGAGAG+AGG - chr1_4:52505057-52505076 Msa0169290:intron 55.0%
CTTGTAGACGAGGAGAGAGG+TGG - chr1_4:52505060-52505079 Msa0169290:intron 55.0%
TTCTCCCTGCAGGCCAATCT+TGG - chr1_4:52505514-52505533 Msa0169290:intron 55.0%
GCAAATGCATCTGAGGAGCG+TGG - chr1_4:52505579-52505598 Msa0169290:intron 55.0%
AGATGTTGAGGAGGGGTTGG+AGG + chr1_4:52506653-52506672 None:intergenic 55.0%
GTGAGATGTTGAGGAGGGGT+TGG + chr1_4:52506656-52506675 None:intergenic 55.0%
TTGAGGGGGGGTGAAGGTTA+AGG - chr1_4:52507166-52507185 Msa0169290:intron 55.0%
GGAGCGTGAAGCAATGGAGA+TGG - chr1_4:52507187-52507206 Msa0169290:intron 55.0%
AATGTAGGCTGCGATGCGTG+TGG - chr1_4:52507244-52507263 Msa0169290:intron 55.0%
ATGTAGGCTGCGATGCGTGT+GGG - chr1_4:52507245-52507264 Msa0169290:intron 55.0%
!! TCATCAAGTGTGGTGCTGCC+TGG - chr1_4:52507358-52507377 Msa0169290:CDS 55.0%
!! CATCAAGTGTGGTGCTGCCT+GGG - chr1_4:52507359-52507378 Msa0169290:CDS 55.0%
AGCAAGAGAGAAGAAGGCCC+AGG + chr1_4:52507379-52507398 None:intergenic 55.0%
GAACGGAAAGAGAGGAACCG+AGG - chr1_4:52507910-52507929 Msa0169290:CDS 55.0%
GTCAGACGATGATGAGGTGG+AGG - chr1_4:52508982-52509001 Msa0169290:intron 55.0%
CGAAGAAGAACAGCAGAGCC+TGG - chr1_4:52509139-52509158 Msa0169290:CDS 55.0%
GAAGAACAGCAGAGCCTGGT+AGG - chr1_4:52509143-52509162 Msa0169290:CDS 55.0%
TGGTAGGGCTTACACTGGGA+AGG - chr1_4:52509168-52509187 Msa0169290:CDS 55.0%
GGCTGCGGCAAGAAAAGGTA+TGG - chr1_4:52509300-52509319 Msa0169290:CDS 55.0%
!! GAGGTGTTGGTGGTTTGCGG+CGG + chr1_4:52497526-52497545 None:intergenic 60.0%
!! TGACGGCACAGAGGTGTTGG+TGG + chr1_4:52497536-52497555 None:intergenic 60.0%
! CGATGACGGCACAGAGGTGT+TGG + chr1_4:52497539-52497558 None:intergenic 60.0%
! TTGCACCGATGACGGCACAG+AGG + chr1_4:52497545-52497564 None:intergenic 60.0%
! GTGGCGCAGAAGTATGCGAC+AGG + chr1_4:52497606-52497625 None:intergenic 60.0%
TTCCTGTGCGATGCGGTCCA+GGG + chr1_4:52497637-52497656 None:intergenic 60.0%
! GCGTCGATGAGGTGGATAGG+GGG + chr1_4:52497666-52497685 None:intergenic 60.0%
AGGTTTCTACTGCTGGCCGG+TGG - chr1_4:52498910-52498929 Msa0169290:intron 60.0%
GGCCATACTTGCAGCCACAG+AGG - chr1_4:52499479-52499498 Msa0169290:intron 60.0%
GGGGGAATTGAATGGGGCGT+TGG - chr1_4:52499991-52500010 Msa0169290:intron 60.0%
GTGCAGCTTCATGCGTGCCT+TGG - chr1_4:52501700-52501719 Msa0169290:CDS 60.0%
GAAATCAAGAAGCCGCGCCC+TGG + chr1_4:52503424-52503443 None:intergenic 60.0%
CTGCCGACAGGATGAGTCGA+TGG - chr1_4:52504093-52504112 Msa0169290:intron 60.0%
ATGAGTCGATGGCGATGGCC+TGG - chr1_4:52504104-52504123 Msa0169290:intron 60.0%
! AAGGTTGCTCGCGGCCTTGT+TGG - chr1_4:52505266-52505285 Msa0169290:CDS 60.0%
!! AGGTTGCTCGCGGCCTTGTT+GGG - chr1_4:52505267-52505286 Msa0169290:CDS 60.0%
TTGGCCTGCAGGGAGAAGAC+AGG + chr1_4:52505511-52505530 None:intergenic 60.0%
!! AGGGGCTGCTGTTGGTGATG+TGG + chr1_4:52506623-52506642 None:intergenic 60.0%
GATGAGGGCGAAGATCAGGC+TGG - chr1_4:52507120-52507139 Msa0169290:intron 60.0%
GTTCTGTTGAGGGGGGGTGA+AGG - chr1_4:52507160-52507179 Msa0169290:intron 60.0%
TGCGCACACGCATCATAGCG+AGG - chr1_4:52507214-52507233 Msa0169290:intron 60.0%
TGTAGGCTGCGATGCGTGTG+GGG - chr1_4:52507246-52507265 Msa0169290:intron 60.0%
! AGAGCCTGGTAGGGCTGGTA+GGG - chr1_4:52509153-52509172 Msa0169290:CDS 60.0%
TAAGCCCTACCAGCCCTACC+AGG + chr1_4:52509160-52509179 None:intergenic 60.0%
! AGGGCTGGTAGGGCTTACAC+TGG - chr1_4:52509163-52509182 Msa0169290:CDS 60.0%
! GGGCTGGTAGGGCTTACACT+GGG - chr1_4:52509164-52509183 Msa0169290:CDS 60.0%
TGAGTCGTCGGCCACAGCAA+CGG - chr1_4:52509278-52509297 Msa0169290:CDS 60.0%
!! CAACGGGCTGCGGCAAGAAA+AGG - chr1_4:52509295-52509314 Msa0169290:CDS 60.0%
!! GTGTTGGTGGTTTGCGGCGG+TGG + chr1_4:52497523-52497542 None:intergenic 65.0%
CTGCGCCACATGCTCATCCC+TGG - chr1_4:52497617-52497636 Msa0169290:CDS 65.0%
GCGGTCCAGGGATGAGCATG+TGG + chr1_4:52497625-52497644 None:intergenic 65.0%
ATCCCTGGACCGCATCGCAC+AGG - chr1_4:52497632-52497651 Msa0169290:CDS 65.0%
GTTCCTGTGCGATGCGGTCC+AGG + chr1_4:52497638-52497657 None:intergenic 65.0%
GGCAAGGGACGGCTGTAGCA+AGG - chr1_4:52498739-52498758 Msa0169290:intron 65.0%
GGGGGGTTGGGTAGCTCAAC+TGG + chr1_4:52506978-52506997 None:intergenic 65.0%
GGCGAAGATCAGGCTGGCGA+TGG - chr1_4:52507126-52507145 Msa0169290:intron 65.0%
GTAGGCTGCGATGCGTGTGG+GGG - chr1_4:52507247-52507266 Msa0169290:intron 65.0%
ACAGCAGAGCCTGGTAGGGC+TGG - chr1_4:52509148-52509167 Msa0169290:CDS 65.0%
! CAGAGCCTGGTAGGGCTGGT+AGG - chr1_4:52509152-52509171 Msa0169290:CDS 65.0%
GAGTCGTCGGCCACAGCAAC+GGG - chr1_4:52509279-52509298 Msa0169290:CDS 65.0%
!! TCGGCCACAGCAACGGGCTG+CGG - chr1_4:52509285-52509304 Msa0169290:CDS 70.0%
CTTGCCGCAGCCCGTTGCTG+TGG + chr1_4:52509292-52509311 None:intergenic 70.0%
GGCTGCGATGCGTGTGGGGG+AGG - chr1_4:52507250-52507269 Msa0169290:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 52497432 52509593 52497432 ID=Msa0169290;Name=Msa0169290
chr1_4 mRNA 52497432 52509593 52497432 ID=Msa0169290-mRNA-1;Parent=Msa0169290;Name=Msa0169290-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.87|0.88|1|1|1|17|152|1255
chr1_4 exon 52497432 52498175 52497432 ID=Msa0169290-mRNA-1:exon:15631;Parent=Msa0169290-mRNA-1
chr1_4 exon 52498434 52498577 52498434 ID=Msa0169290-mRNA-1:exon:15630;Parent=Msa0169290-mRNA-1
chr1_4 exon 52499042 52499121 52499042 ID=Msa0169290-mRNA-1:exon:15629;Parent=Msa0169290-mRNA-1
chr1_4 exon 52501371 52501499 52501371 ID=Msa0169290-mRNA-1:exon:15628;Parent=Msa0169290-mRNA-1
chr1_4 exon 52501595 52501756 52501595 ID=Msa0169290-mRNA-1:exon:15627;Parent=Msa0169290-mRNA-1
chr1_4 exon 52501909 52502022 52501909 ID=Msa0169290-mRNA-1:exon:15626;Parent=Msa0169290-mRNA-1
chr1_4 exon 52502857 52502922 52502857 ID=Msa0169290-mRNA-1:exon:15625;Parent=Msa0169290-mRNA-1
chr1_4 exon 52503023 52503199 52503023 ID=Msa0169290-mRNA-1:exon:15624;Parent=Msa0169290-mRNA-1
chr1_4 exon 52503357 52503410 52503357 ID=Msa0169290-mRNA-1:exon:15623;Parent=Msa0169290-mRNA-1
chr1_4 exon 52503507 52503600 52503507 ID=Msa0169290-mRNA-1:exon:15622;Parent=Msa0169290-mRNA-1
chr1_4 exon 52503753 52503922 52503753 ID=Msa0169290-mRNA-1:exon:15621;Parent=Msa0169290-mRNA-1
chr1_4 exon 52504643 52505032 52504643 ID=Msa0169290-mRNA-1:exon:15620;Parent=Msa0169290-mRNA-1
chr1_4 exon 52505110 52505319 52505110 ID=Msa0169290-mRNA-1:exon:15619;Parent=Msa0169290-mRNA-1
chr1_4 exon 52506060 52506151 52506060 ID=Msa0169290-mRNA-1:exon:15618;Parent=Msa0169290-mRNA-1
chr1_4 exon 52507320 52507571 52507320 ID=Msa0169290-mRNA-1:exon:15617;Parent=Msa0169290-mRNA-1
chr1_4 exon 52507662 52508236 52507662 ID=Msa0169290-mRNA-1:exon:15616;Parent=Msa0169290-mRNA-1
chr1_4 exon 52509127 52509593 52509127 ID=Msa0169290-mRNA-1:exon:15615;Parent=Msa0169290-mRNA-1
chr1_4 CDS 52509127 52509593 52509127 ID=Msa0169290-mRNA-1:cds;Parent=Msa0169290-mRNA-1
chr1_4 CDS 52507662 52508236 52507662 ID=Msa0169290-mRNA-1:cds;Parent=Msa0169290-mRNA-1
chr1_4 CDS 52507320 52507571 52507320 ID=Msa0169290-mRNA-1:cds;Parent=Msa0169290-mRNA-1
chr1_4 CDS 52506060 52506151 52506060 ID=Msa0169290-mRNA-1:cds;Parent=Msa0169290-mRNA-1
chr1_4 CDS 52505110 52505319 52505110 ID=Msa0169290-mRNA-1:cds;Parent=Msa0169290-mRNA-1
chr1_4 CDS 52504643 52505032 52504643 ID=Msa0169290-mRNA-1:cds;Parent=Msa0169290-mRNA-1
chr1_4 CDS 52503753 52503922 52503753 ID=Msa0169290-mRNA-1:cds;Parent=Msa0169290-mRNA-1
chr1_4 CDS 52503507 52503600 52503507 ID=Msa0169290-mRNA-1:cds;Parent=Msa0169290-mRNA-1
chr1_4 CDS 52503357 52503410 52503357 ID=Msa0169290-mRNA-1:cds;Parent=Msa0169290-mRNA-1
chr1_4 CDS 52503023 52503199 52503023 ID=Msa0169290-mRNA-1:cds;Parent=Msa0169290-mRNA-1
chr1_4 CDS 52502857 52502922 52502857 ID=Msa0169290-mRNA-1:cds;Parent=Msa0169290-mRNA-1
chr1_4 CDS 52501909 52502022 52501909 ID=Msa0169290-mRNA-1:cds;Parent=Msa0169290-mRNA-1
chr1_4 CDS 52501595 52501756 52501595 ID=Msa0169290-mRNA-1:cds;Parent=Msa0169290-mRNA-1
chr1_4 CDS 52501371 52501499 52501371 ID=Msa0169290-mRNA-1:cds;Parent=Msa0169290-mRNA-1
chr1_4 CDS 52499042 52499121 52499042 ID=Msa0169290-mRNA-1:cds;Parent=Msa0169290-mRNA-1
chr1_4 CDS 52498434 52498577 52498434 ID=Msa0169290-mRNA-1:cds;Parent=Msa0169290-mRNA-1
chr1_4 CDS 52497584 52498175 52497584 ID=Msa0169290-mRNA-1:cds;Parent=Msa0169290-mRNA-1
chr1_4 three_prime_UTR 52497432 52497583 52497432 ID=Msa0169290-mRNA-1:three_prime_utr;Parent=Msa0169290-mRNA-1
Gene Sequence

>Msa0169290

ATGGAAGAAGTCGAAATGGAGGAATCAACATTCAGCAACGAATCCAACGATGATATATGCAATTCAATTCTCTCTCGTTTCTCAAACTCCACCGCCGCAAACCACCAACACCTCTGTGCCGTCATCGGTGCAATGTCACAGGAACTCAAAGATCACAACCTCTCTTCTTCACCTGTCGCATACTTCTGCGCCACATGCTCATCCCTGGACCGCATCGCACAGGAACCTAATCCCCCTATCCACCTCATCGACGCACTTTTAACAATTCTCTCGATTGTTATCGTTAAAGTTCCCGTTGCTGTGTTGAAGGAGAAGAGAGAGTTTCTATCGGAGCTTGTTGCGAAAGTTGTTATGTTGCCATCGAGTTTGGAGAGTGGTGTTGTTCATGGATTGAAATGTGTTTCACATTTGTTGATTCATAGGGATAGTGTTCATTGGTCTGATGTATCGACATTGTTCAATTTCTTACTGGTTCTCTTCCAACAGGTAAGAAGGCAATCTCATTTGTGTCTCCGCAATGTCTTGATAAACTTTCAAAATTCTTCGCTATTAGCATCTGCAAGTGAAGGGGTCAAAAACCTACTTGAAAGGTTTCTACTGCTGGCCGGTGGAGCAAATGCAAATGATGATGATGGAACTAAGGGAGCAAATGAAAACGATGGTGATGGAACTAAGGGAGCCCAACAAGTTTTGTATATTCTTGATGCCTTGAAAGAATGCCTTCCTTTCTTGTCTCTAAAATACAAGACCAACATTCTTAACCACTTCAAAACTCTTTTAAATATGGGTCAACCCCTAGTCACAAGGCGCATAACGGATGGTTTAAATTTTCTCTGTCTTAACCCAACATCGGAAGTTTCCCCCGAAGCACTACTTGAGGTGTTATGCACATTATCATATCTTTCTACCTCATCAACTGAGATTTCTGGAGATGGTATGACATTTACTGCTCGCTTGCTTGATGCTGGAATGAAGAAAGTTTTTTCTCTAAACAGGCAAATGTGTGTAATTAAGCTTCCTAGTGTCTTTAATGATCTCAAAGATATTTTGGCATCTGAACATGAAGAGGCCATACTTGCAGCCACAGAGGCACTCAAGAGCATGATCAACTATTGCATTGATGAAAGTTTGATTAAACAGGGAGTGGATCAGATAACTTTGGATGAATCAAGGATGTCAGGACCAACCATTATTGAGAAAATTTGTGTAACTCTTGAGAGCCTACTTGATTATCACTATGCTGCTTCTTGGGATAGAGTATTTGAAGTTGTTTCCTCTATGTTTCACAAATTAGGAAGTAACTCTCCTTACTTTATGAGAGGTATACTCAAAAACATGGAAGATATGCAGCAGCTGCCTGATGAAAATTTTCCCTTTAGGAAACAGCTTCATGCGTGCCTTGGGTCAGCTCTTGTTGCAATGGGACCCGAAACTTTTTTATCCCTTATACCATTAAATTTGGAAGCTGAAGATTTATCCGTCTCAAATAAATGGCTTTTTCCAATTCTAAAACAGTATATTGTTGGTGTGCGTCTAAAATATTTTACAGAGGAAATTTTGCCTATGATTGAACGAGCAAGGGAGAAGGCTCAAAAGCTTGAGAAGCAAGAACTGATGAAAGCAGACACACTTGTTTACTCTTTGTGGTCTTTGCTGCCTTCATTTTGTAACTATCCTTCAGACACAGCTAAAAGTTTCAAGGATCTTGAAAAACATTTACGTAGTAAACTAAAAGAAGAACCTAATATTCGTGGAATAATATGCACTAGTTTGCAGCTTCTGATTAGACAAAACAAGAACATTCAGGATTCAAATGATAAGGATTATAGTAGGCAAGATATGGCCAAAGAACAAGTCTTGTATAATTACTCGCAACAGGTTGCAACAGAAAATTTGAGGGCACTGGAGATATCTGCCAATAATTTGTTGAAAGATCTGTCAGACGTGTTCCTGAAATCTACAAAAGATGATGGTGGTTGTTTGCAGGGTACAATCGGTGATATTGCTTCTATAGCAGACAAAAAAGTTGTGCAAAACTTATTTAAGAAGAAAATGTCGGATCTCTTAAAATGCACTCAAAATGCCAACAAAGTAGACGATTCAGAAAGCTCTATGCAGATTGATACACCAAATGACGTGTCTCAATCAGTTCTCAGGGCGCGGCTTCTTGATTTCGCAGCTTCATTGTTGCCTGGATTAGATGCGAAAGATATTGATTTATTATTTCAAGTAATAAAGCCAGCATTGCAGGATGTTGGTGTCATGCAGAAGAAGGCATACAAAGTTCTTTTGATCATGCTCAAGAGCTCAGACAGTTTTGTTTCATCGAAGCTTGAGGTTCTGCTTGGGCTTATGGTTGAAATTCTTCCTTGCCATTCTTCTGCCAAACGCCATAGACTTGATTGCCTTTATTTATTGATAGTCCATGTCTTGAAGTCAGAGGCATTCAAAGACGAGTTCCTTTACTTATTAAAATCAAAGGATGAGTCGATGGCGATGGCCTGGCCAGAAGTTTTCCTCACTGAGATAATACTGGCTCTAAAGGAGGCTAATAAAAAAACCAGGAACAGGGCTTATGAAATTCTGGTCGAAATTGCCCATGCACTTGTAGACGAGGAGAGAGGTGGGAACAGAAATAACCTCTATCAATTTTTTATCATGGTTGCTCGCGGCCTTGTTGGGAAAACTCCACATATGATAAGTGCAACAGTCAAAGGTTTAGCTCGCTTGGCTTATGAGTTCTCTGATCTTGTTTTAACTGCTTTTGATTTGCTTCCATCCACATTTGTCCTGCTGGAAAAAAAGAACAAAGAGATTACCAAGGCCAATCTTGGTTTATTAAAGGTTTTAGTAGCCAAATCACAAGCAGAAGGATTGCAAATGCATCTGAGGAGCGTGGTTGAGTGTTTGTTTAAGTGGCAAGATGATGCCAAAAATCATTTTAAAGCAAAGATCAAGGAACGGAAAGAGAGGAACCGAGGTGCTAAATCTGAAGAAACTAGGTCTCATGTTTCAAAAGCAACTACATCCAGGCAAAGTAGACGGAACCATATGGATATTTTTTCAGATTTTGATAGAGACAGCGCCGGTAGTGATGCAGAATACCTGAACGGCAAGACAATTTTTAGCGGGGGCAAATCTTCCACGCATCTCAAATCAGCAGTGTCTTCATTTGGGTCCAAGATGAGACTAAAAAACAATATTCCTGAGCACTTATCTGACGAATCAGATGACGAGCCACTTGATTTGCTTGACCGGCAGAAAGTAAGGTCTGCTCTTAGATCTGAGAATCTCAAAAGGAAGTCAAGGTCAGACGATGATGAGGTGGAGGTAGATTCTGAAGGACGTTTGATCATCCGTGAGGAAGGGGAACAAACGAAGAAAAAACCAGCTGATTCAGACTATGATGCTAGGAGTGAGCCTGATAGTCATTTGTCTGCAAGGTCCGGAACTAAAGGCCAGAAGCGAAGAAGAACAGCAGAGCCTGGTAGGGCTGGTAGGGCTTACACTGGGAAGGAATATGCTAGCAGAAAAGCTGGTGGAGATATTAAGAGGAAGGATAAGCTTGAACCTTATGCATATTGGCCACTTGATCGGAAAATGATGAGTCGTCGGCCACAGCAACGGGCTGCGGCAAGAAAAGGTATGGCAACTGTGGTAAATATGACAAAAAGGCTTGAAGGCAAGAGTGTCTCTGGCATGCTTTCTATGAAGAGTATGAAACTAAAAAGAACTCAAAAGAAAGGCAGGAAGCAAAAGAAAATGTAG
Protein sequence

>Msa0169290

MEEVEMEESTFSNESNDDICNSILSRFSNSTAANHQHLCAVIGAMSQELKDHNLSSSPVAYFCATCSSLDRIAQEPNPPIHLIDALLTILSIVIVKVPVAVLKEKREFLSELVAKVVMLPSSLESGVVHGLKCVSHLLIHRDSVHWSDVSTLFNFLLVLFQQVRRQSHLCLRNVLINFQNSSLLASASEGVKNLLERFLLLAGGANANDDDGTKGANENDGDGTKGAQQVLYILDALKECLPFLSLKYKTNILNHFKTLLNMGQPLVTRRITDGLNFLCLNPTSEVSPEALLEVLCTLSYLSTSSTEISGDGMTFTARLLDAGMKKVFSLNRQMCVIKLPSVFNDLKDILASEHEEAILAATEALKSMINYCIDESLIKQGVDQITLDESRMSGPTIIEKICVTLESLLDYHYAASWDRVFEVVSSMFHKLGSNSPYFMRGILKNMEDMQQLPDENFPFRKQLHACLGSALVAMGPETFLSLIPLNLEAEDLSVSNKWLFPILKQYIVGVRLKYFTEEILPMIERAREKAQKLEKQELMKADTLVYSLWSLLPSFCNYPSDTAKSFKDLEKHLRSKLKEEPNIRGIICTSLQLLIRQNKNIQDSNDKDYSRQDMAKEQVLYNYSQQVATENLRALEISANNLLKDLSDVFLKSTKDDGGCLQGTIGDIASIADKKVVQNLFKKKMSDLLKCTQNANKVDDSESSMQIDTPNDVSQSVLRARLLDFAASLLPGLDAKDIDLLFQVIKPALQDVGVMQKKAYKVLLIMLKSSDSFVSSKLEVLLGLMVEILPCHSSAKRHRLDCLYLLIVHVLKSEAFKDEFLYLLKSKDESMAMAWPEVFLTEIILALKEANKKTRNRAYEILVEIAHALVDEERGGNRNNLYQFFIMVARGLVGKTPHMISATVKGLARLAYEFSDLVLTAFDLLPSTFVLLEKKNKEITKANLGLLKVLVAKSQAEGLQMHLRSVVECLFKWQDDAKNHFKAKIKERKERNRGAKSEETRSHVSKATTSRQSRRNHMDIFSDFDRDSAGSDAEYLNGKTIFSGGKSSTHLKSAVSSFGSKMRLKNNIPEHLSDESDDEPLDLLDRQKVRSALRSENLKRKSRSDDDEVEVDSEGRLIIREEGEQTKKKPADSDYDARSEPDSHLSARSGTKGQKRRRTAEPGRAGRAYTGKEYASRKAGGDIKRKDKLEPYAYWPLDRKMMSRRPQQRAAARKGMATVVNMTKRLEGKSVSGMLSMKSMKLKRTQKKGRKQKKM*