Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0664150 | XP_024638330.1 | 74.783 | 345 | 38 | 9 | 1 | 314 | 1 | 327 | 5.64e-151 | 436 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0664150 | sp|Q94AN4|AP2L1_ARATH | 43.840 | 349 | 133 | 10 | 3 | 313 | 20 | 343 | 4.88e-61 | 201 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0664150 | A0A396HYJ4 | 74.783 | 345 | 38 | 9 | 1 | 314 | 1 | 327 | 2.69e-151 | 436 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005890 | Msa0664150 | 0.820209 | 7.739779e-53 | -8.615850e-47 |
| Msa0075450 | Msa0664150 | 0.804127 | 2.507902e-49 | -8.615850e-47 |
| Msa0081520 | Msa0664150 | 0.828140 | 1.060800e-54 | -8.615850e-47 |
| Msa0093850 | Msa0664150 | 0.806956 | 6.393514e-50 | -8.615850e-47 |
| Msa0094780 | Msa0664150 | 0.810615 | 1.055530e-50 | -8.615850e-47 |
| Msa0106620 | Msa0664150 | 0.817123 | 3.882355e-52 | -8.615850e-47 |
| Msa0614000 | Msa0664150 | 0.807492 | 4.922657e-50 | -8.615850e-47 |
| Msa0624900 | Msa0664150 | 0.839917 | 1.189365e-57 | -8.615850e-47 |
| Msa0626450 | Msa0664150 | 0.848081 | 7.689873e-60 | -8.615850e-47 |
| Msa0626460 | Msa0664150 | 0.813053 | 3.109115e-51 | -8.615850e-47 |
| Msa0626490 | Msa0664150 | 0.846960 | 1.564332e-59 | -8.615850e-47 |
| Msa0638480 | Msa0664150 | 0.830268 | 3.231453e-55 | -8.615850e-47 |
| Msa0658640 | Msa0664150 | 0.814750 | 1.314371e-51 | -8.615850e-47 |
| Msa0663270 | Msa0664150 | 0.856295 | 3.543261e-62 | -8.615850e-47 |
| Msa0664090 | Msa0664150 | 0.915294 | 6.979792e-85 | -8.615850e-47 |
| Msa0664150 | Msa0664540 | 0.824480 | 7.888942e-54 | -8.615850e-47 |
| Msa0664150 | Msa0664600 | 0.850661 | 1.469955e-60 | -8.615850e-47 |
| Msa0664150 | Msa0697160 | 0.822199 | 2.691973e-53 | -8.615850e-47 |
| Msa0664150 | Msa0721080 | 0.823175 | 1.595956e-53 | -8.615850e-47 |
| Msa0664150 | Msa0727640 | 0.808412 | 3.137495e-50 | -8.615850e-47 |
| Msa0664150 | Msa0730930 | 0.811618 | 6.396358e-51 | -8.615850e-47 |
| Msa0664150 | Msa0768990 | 0.823297 | 1.494316e-53 | -8.615850e-47 |
| Msa0664150 | Msa0795870 | 0.845244 | 4.581856e-59 | -8.615850e-47 |
| Msa0664150 | Msa0797930 | 0.809646 | 1.706852e-50 | -8.615850e-47 |
| Msa0664150 | Msa0824450 | 0.817099 | 3.930308e-52 | -8.615850e-47 |
| Msa0664150 | Msa0830130 | 0.800723 | 1.261010e-48 | -8.615850e-47 |
| Msa0664150 | Msa0830460 | 0.803110 | 4.076817e-49 | -8.615850e-47 |
| Msa0664150 | Msa0833650 | 0.846742 | 1.794070e-59 | -8.615850e-47 |
| Msa0664150 | Msa0835960 | 0.828485 | 8.757354e-55 | -8.615850e-47 |
| Msa0664150 | Msa0861510 | 0.816128 | 6.485823e-52 | -8.615850e-47 |
| Msa0664150 | Msa0861600 | 0.820187 | 7.830288e-53 | -8.615850e-47 |
| Msa0664150 | Msa0871720 | 0.800002 | 1.767758e-48 | -8.615850e-47 |
| Msa0664150 | Msa0876930 | 0.803797 | 2.936654e-49 | -8.615850e-47 |
| Msa0664150 | Msa0881090 | 0.812565 | 3.976604e-51 | -8.615850e-47 |
| Msa0664150 | Msa0902510 | 0.801589 | 8.384205e-49 | -8.615850e-47 |
| Msa0664150 | Msa0903070 | 0.826907 | 2.096631e-54 | -8.615850e-47 |
| Msa0664150 | Msa0945110 | 0.804521 | 2.075957e-49 | -8.615850e-47 |
| Msa0664150 | Msa0979180 | 0.811679 | 6.206381e-51 | -8.615850e-47 |
| Msa0664150 | Msa1028280 | 0.824122 | 9.575584e-54 | -8.615850e-47 |
| Msa0664150 | Msa1044470 | 0.947578 | 5.115999e-106 | -8.615850e-47 |
| Msa0664150 | Msa1072940 | 0.804102 | 2.537409e-49 | -8.615850e-47 |
| Msa0664150 | Msa1103990 | 0.808593 | 2.869532e-50 | -8.615850e-47 |
| Msa0664150 | Msa1112380 | 0.804010 | 2.652343e-49 | -8.615850e-47 |
| Msa0664150 | Msa1113340 | 0.801909 | 7.206671e-49 | -8.615850e-47 |
| Msa0664150 | Msa1132840 | 0.850536 | 1.593509e-60 | -8.615850e-47 |
| Msa0664150 | Msa1145810 | 0.842210 | 2.970886e-58 | -8.615850e-47 |
| Msa0664150 | Msa1155170 | -0.810234 | 1.275407e-50 | -8.615850e-47 |
| Msa0664150 | Msa1157870 | 0.822662 | 2.101501e-53 | -8.615850e-47 |
| Msa0664150 | Msa1160920 | 0.812952 | 3.271433e-51 | -8.615850e-47 |
| Msa0664150 | Msa1186020 | 0.839735 | 1.326047e-57 | -8.615850e-47 |
| Msa0664150 | Msa1200890 | 0.833774 | 4.397403e-56 | -8.615850e-47 |
| Msa0664150 | Msa1208430 | 0.806554 | 7.775304e-50 | -8.615850e-47 |
| Msa0664150 | Msa1208950 | 0.803729 | 3.033224e-49 | -8.615850e-47 |
| Msa0664150 | Msa1217210 | 0.844445 | 7.529036e-59 | -8.615850e-47 |
| Msa0664150 | Msa1219000 | 0.816156 | 6.394783e-52 | -8.615850e-47 |
| Msa0664150 | Msa1222350 | 0.820381 | 7.067463e-53 | -8.615850e-47 |
| Msa0664150 | Msa1225860 | -0.803090 | 4.114606e-49 | -8.615850e-47 |
| Msa0664150 | Msa1226520 | 0.809336 | 1.990068e-50 | -8.615850e-47 |
| Msa0664150 | Msa1231820 | 0.802593 | 5.212324e-49 | -8.615850e-47 |
| Msa0664150 | Msa1267900 | 0.804554 | 2.042708e-49 | -8.615850e-47 |
| Msa0664150 | Msa1269480 | 0.804093 | 2.548684e-49 | -8.615850e-47 |
| Msa0664150 | Msa1277150 | 0.823075 | 1.683416e-53 | -8.615850e-47 |
| Msa0664150 | Msa1320670 | 0.821626 | 3.652553e-53 | -8.615850e-47 |
| Msa0664150 | Msa1332760 | 0.805784 | 1.129080e-49 | -8.615850e-47 |
| Msa0664150 | Msa1348090 | 0.803570 | 3.273319e-49 | -8.615850e-47 |
| Msa0664150 | Msa1356830 | 0.813459 | 2.532548e-51 | -8.615850e-47 |
| Msa0664150 | Msa1359690 | 0.811328 | 7.394970e-51 | -8.615850e-47 |
| Msa0664150 | Msa1369150 | 0.803539 | 3.321718e-49 | -8.615850e-47 |
| Msa0664150 | Msa1392580 | 0.829629 | 4.625447e-55 | -8.615850e-47 |
| Msa0664150 | Msa1397400 | 0.816870 | 4.424088e-52 | -8.615850e-47 |
| Msa0664150 | Msa1418240 | 0.809842 | 1.549039e-50 | -8.615850e-47 |
| Msa0664150 | Msa1420950 | 0.806317 | 8.723217e-50 | -8.615850e-47 |
| Msa0664150 | Msa1422420 | 0.809618 | 1.730813e-50 | -8.615850e-47 |
| Msa0664150 | Msa1427200 | 0.803812 | 2.915815e-49 | -8.615850e-47 |
| Msa0664150 | Msa1437940 | 0.806017 | 1.009038e-49 | -8.615850e-47 |
| Msa0664150 | Msa1440880 | 0.801818 | 7.526439e-49 | -8.615850e-47 |
| Msa0664150 | Msa1440960 | 0.838866 | 2.229653e-57 | -8.615850e-47 |
| Msa0664150 | Msa1446810 | 0.813196 | 2.892721e-51 | -8.615850e-47 |
| Msa0168500 | Msa0664150 | 0.803953 | 2.725371e-49 | -8.615850e-47 |
| Msa0173890 | Msa0664150 | 0.812318 | 4.504107e-51 | -8.615850e-47 |
| Msa0174450 | Msa0664150 | 0.820324 | 7.286498e-53 | -8.615850e-47 |
| Msa0176170 | Msa0664150 | 0.800904 | 1.157674e-48 | -8.615850e-47 |
| Msa0182190 | Msa0664150 | 0.812342 | 4.450142e-51 | -8.615850e-47 |
| Msa0225460 | Msa0664150 | 0.806174 | 9.351514e-50 | -8.615850e-47 |
| Msa0225680 | Msa0664150 | 0.814184 | 1.753569e-51 | -8.615850e-47 |
| Msa0225860 | Msa0664150 | 0.843722 | 1.176516e-58 | -8.615850e-47 |
| Msa0369790 | Msa0664150 | 0.822766 | 1.987719e-53 | -8.615850e-47 |
| Msa0378720 | Msa0664150 | 0.822359 | 2.470815e-53 | -8.615850e-47 |
| Msa0418190 | Msa0664150 | 0.807585 | 4.704055e-50 | -8.615850e-47 |
| Msa0428370 | Msa0664150 | 0.809000 | 2.348720e-50 | -8.615850e-47 |
| Msa0464000 | Msa0664150 | 0.819402 | 1.183388e-52 | -8.615850e-47 |
| Msa0474730 | Msa0664150 | 0.816996 | 4.146611e-52 | -8.615850e-47 |
| Msa0476650 | Msa0664150 | 0.824219 | 9.089534e-54 | -8.615850e-47 |
| Msa0260510 | Msa0664150 | 0.807467 | 4.984561e-50 | -8.615850e-47 |
| Msa0267110 | Msa0664150 | 0.806545 | 7.808978e-50 | -8.615850e-47 |
| Msa0279710 | Msa0664150 | 0.810400 | 1.174426e-50 | -8.615850e-47 |
| Msa0279850 | Msa0664150 | 0.824318 | 8.612448e-54 | -8.615850e-47 |
| Msa0287740 | Msa0664150 | 0.801124 | 1.044003e-48 | -8.615850e-47 |
| Msa0298470 | Msa0664150 | 0.821989 | 3.011341e-53 | -8.615850e-47 |
| Msa0300270 | Msa0664150 | 0.808599 | 2.861946e-50 | -8.615850e-47 |
| Msa0300320 | Msa0664150 | 0.830853 | 2.324470e-55 | -8.615850e-47 |
| Msa0307270 | Msa0664150 | 0.813636 | 2.314972e-51 | -8.615850e-47 |
| Msa0322900 | Msa0664150 | 0.816170 | 6.348397e-52 | -8.615850e-47 |
| Msa0330380 | Msa0664150 | 0.803542 | 3.316796e-49 | -8.615850e-47 |
| Msa0337700 | Msa0664150 | 0.808308 | 3.301444e-50 | -8.615850e-47 |
| Msa0339500 | Msa0664150 | 0.818807 | 1.616386e-52 | -8.615850e-47 |
| Msa0339650 | Msa0664150 | 0.810214 | 1.288028e-50 | -8.615850e-47 |
| Msa0340500 | Msa0664150 | 0.816704 | 4.821981e-52 | -8.615850e-47 |
| Msa0341690 | Msa0664150 | 0.822630 | 2.137259e-53 | -8.615850e-47 |
| Msa0361910 | Msa0664150 | 0.812469 | 4.174852e-51 | -8.615850e-47 |
| Msa0483100 | Msa0664150 | 0.821672 | 3.565209e-53 | -8.615850e-47 |
| Msa0484380 | Msa0664150 | 0.802179 | 6.341661e-49 | -8.615850e-47 |
| Msa0485240 | Msa0664150 | 0.805218 | 1.484205e-49 | -8.615850e-47 |
| Msa0509550 | Msa0664150 | 0.823589 | 1.276741e-53 | -8.615850e-47 |
| Msa0518030 | Msa0664150 | 0.804142 | 2.489947e-49 | -8.615850e-47 |
| Msa0527820 | Msa0664150 | 0.887236 | 1.704370e-72 | -8.615850e-47 |
| Msa0573850 | Msa0664150 | 0.825326 | 4.981324e-54 | -8.615850e-47 |
| Msa0580370 | Msa0664150 | 0.847424 | 1.166993e-59 | -8.615850e-47 |
| Msa0582480 | Msa0664150 | 0.907897 | 3.081399e-81 | -8.615850e-47 |
| Msa0583360 | Msa0664150 | -0.801918 | 7.178347e-49 | -8.615850e-47 |
| Msa0586220 | Msa0664150 | 0.906984 | 8.261639e-81 | -8.615850e-47 |
| Msa0590830 | Msa0664150 | 0.806180 | 9.324405e-50 | -8.615850e-47 |
| Msa0597790 | Msa0664150 | 0.803779 | 2.962350e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0664150 | MtrunA17_Chr4g0002011 | 74.783 | 345 | 38 | 9 | 1 | 314 | 1 | 327 | 5.19e-155 | 436 |
| Msa0664150 | MtrunA17_Chr4g0073521 | 44.974 | 378 | 118 | 14 | 1 | 314 | 1 | 352 | 8.34e-78 | 241 |
| Msa0664150 | MtrunA17_Chr8g0355191 | 39.721 | 287 | 126 | 9 | 2 | 277 | 28 | 278 | 8.17e-49 | 168 |
| Msa0664150 | MtrunA17_Chr7g0216601 | 46.667 | 210 | 73 | 7 | 3 | 200 | 48 | 230 | 7.87e-44 | 154 |
| Msa0664150 | MtrunA17_Chr8g0355181 | 48.571 | 210 | 78 | 7 | 1 | 200 | 29 | 218 | 2.73e-42 | 150 |
| Msa0664150 | MtrunA17_Chr6g0452911 | 50.286 | 175 | 52 | 5 | 45 | 200 | 75 | 233 | 3.84e-42 | 149 |
| Msa0664150 | MtrunA17_Chr4g0072291 | 47.647 | 170 | 63 | 3 | 45 | 203 | 173 | 327 | 6.25e-42 | 151 |
| Msa0664150 | MtrunA17_Chr2g0305821 | 62.602 | 123 | 26 | 3 | 23 | 128 | 32 | 151 | 8.33e-41 | 139 |
| Msa0664150 | MtrunA17_Chr4g0032631 | 40.496 | 242 | 104 | 6 | 26 | 255 | 162 | 375 | 5.63e-40 | 147 |
| Msa0664150 | MtrunA17_Chr8g0362541 | 51.813 | 193 | 78 | 6 | 17 | 200 | 59 | 245 | 6.64e-40 | 144 |
| Msa0664150 | MtrunA17_Chr7g0249621 | 43.062 | 209 | 82 | 5 | 13 | 203 | 238 | 427 | 1.94e-39 | 147 |
| Msa0664150 | MtrunA17_Chr1g0152161 | 49.390 | 164 | 60 | 4 | 45 | 200 | 326 | 474 | 2.69e-39 | 146 |
| Msa0664150 | MtrunA17_Chr2g0328971 | 44.086 | 186 | 77 | 4 | 26 | 203 | 166 | 332 | 3.64e-39 | 144 |
| Msa0664150 | MtrunA17_Chr3g0135161 | 47.305 | 167 | 65 | 4 | 45 | 203 | 324 | 475 | 1.27e-37 | 141 |
| Msa0664150 | MtrunA17_Chr8g0343851 | 45.509 | 167 | 68 | 3 | 45 | 203 | 262 | 413 | 1.77e-37 | 140 |
| Msa0664150 | MtrunA17_Chr4g0054351 | 46.784 | 171 | 55 | 5 | 45 | 199 | 324 | 474 | 2.21e-37 | 140 |
| Msa0664150 | MtrunA17_Chr5g0400871 | 46.784 | 171 | 63 | 5 | 45 | 203 | 263 | 417 | 2.43e-37 | 139 |
| Msa0664150 | MtrunA17_Chr5g0412151 | 43.750 | 192 | 72 | 5 | 26 | 203 | 223 | 392 | 3.26e-29 | 116 |
| Msa0664150 | MtrunA17_Chr8g0367311 | 47.826 | 138 | 54 | 3 | 65 | 200 | 26 | 147 | 4.32e-29 | 112 |
| Msa0664150 | MtrunA17_Chr7g0257361 | 52.212 | 113 | 40 | 2 | 26 | 128 | 56 | 164 | 6.02e-26 | 106 |
| Msa0664150 | MtrunA17_Chr4g0053181 | 39.791 | 191 | 99 | 3 | 45 | 234 | 187 | 362 | 6.15e-21 | 93.2 |
| Msa0664150 | MtrunA17_Chr2g0305831 | 37.430 | 179 | 63 | 7 | 172 | 308 | 29 | 200 | 1.60e-20 | 87.8 |
| Msa0664150 | MtrunA17_Chr7g0263581 | 35.556 | 225 | 119 | 6 | 45 | 267 | 150 | 350 | 2.69e-20 | 90.9 |
| Msa0664150 | MtrunA17_Chr5g0401891 | 39.227 | 181 | 94 | 3 | 45 | 225 | 163 | 327 | 1.81e-19 | 88.6 |
| Msa0664150 | MtrunA17_Chr4g0030191 | 37.895 | 190 | 99 | 4 | 45 | 233 | 142 | 313 | 6.53e-18 | 84.0 |
| Msa0664150 | MtrunA17_Chr2g0325911 | 34.574 | 188 | 89 | 3 | 45 | 231 | 145 | 299 | 1.03e-14 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0664150 | AT1G16060.1 | 43.840 | 349 | 133 | 10 | 3 | 313 | 20 | 343 | 4.96e-62 | 201 |
| Msa0664150 | AT1G79700.2 | 47.573 | 309 | 110 | 11 | 24 | 313 | 35 | 310 | 3.81e-58 | 189 |
| Msa0664150 | AT1G79700.1 | 46.104 | 308 | 106 | 9 | 24 | 313 | 35 | 300 | 1.18e-57 | 188 |
| Msa0664150 | AT5G57390.2 | 47.647 | 170 | 63 | 3 | 45 | 203 | 96 | 250 | 1.40e-41 | 149 |
| Msa0664150 | AT5G57390.1 | 47.647 | 170 | 63 | 3 | 45 | 203 | 214 | 368 | 4.87e-41 | 150 |
| Msa0664150 | AT1G16060.3 | 43.478 | 253 | 97 | 8 | 78 | 309 | 42 | 269 | 1.51e-39 | 140 |
| Msa0664150 | AT1G51190.1 | 40.952 | 210 | 87 | 5 | 12 | 203 | 165 | 355 | 1.18e-38 | 144 |
| Msa0664150 | AT1G79700.3 | 46.639 | 238 | 92 | 9 | 78 | 313 | 30 | 234 | 2.02e-38 | 136 |
| Msa0664150 | AT3G54320.1 | 48.148 | 216 | 77 | 7 | 4 | 204 | 36 | 231 | 2.06e-38 | 141 |
| Msa0664150 | AT1G79700.4 | 46.639 | 238 | 92 | 9 | 78 | 313 | 24 | 228 | 2.07e-38 | 136 |
| Msa0664150 | AT3G54320.3 | 48.148 | 216 | 77 | 7 | 4 | 204 | 36 | 231 | 2.08e-38 | 141 |
| Msa0664150 | AT5G17430.2 | 44.324 | 185 | 73 | 4 | 26 | 199 | 144 | 309 | 6.21e-38 | 141 |
| Msa0664150 | AT5G17430.1 | 44.324 | 185 | 73 | 4 | 26 | 199 | 206 | 371 | 6.66e-38 | 142 |
| Msa0664150 | AT1G72570.1 | 41.627 | 209 | 78 | 6 | 24 | 203 | 195 | 388 | 7.55e-38 | 139 |
| Msa0664150 | AT3G20840.1 | 41.270 | 189 | 81 | 4 | 26 | 203 | 177 | 346 | 5.95e-37 | 139 |
| Msa0664150 | AT4G37750.1 | 46.471 | 170 | 65 | 4 | 45 | 203 | 294 | 448 | 6.48e-36 | 136 |
| Msa0664150 | AT5G65510.4 | 42.130 | 216 | 87 | 7 | 3 | 203 | 146 | 338 | 4.20e-30 | 119 |
| Msa0664150 | AT5G65510.2 | 42.130 | 216 | 87 | 7 | 3 | 203 | 204 | 396 | 5.79e-30 | 119 |
| Msa0664150 | AT5G65510.1 | 42.130 | 216 | 87 | 7 | 3 | 203 | 204 | 396 | 5.79e-30 | 119 |
| Msa0664150 | AT5G65510.3 | 46.763 | 139 | 60 | 2 | 3 | 131 | 146 | 280 | 1.33e-28 | 112 |
| Msa0664150 | AT3G54320.4 | 51.250 | 160 | 54 | 5 | 66 | 217 | 41 | 184 | 2.39e-28 | 112 |
| Msa0664150 | AT3G54320.5 | 51.250 | 160 | 54 | 5 | 66 | 217 | 41 | 184 | 2.39e-28 | 112 |
| Msa0664150 | AT5G10510.2 | 43.158 | 190 | 73 | 7 | 26 | 203 | 226 | 392 | 3.28e-28 | 114 |
| Msa0664150 | AT5G10510.7 | 42.487 | 193 | 73 | 7 | 26 | 203 | 226 | 395 | 7.97e-28 | 113 |
| Msa0664150 | AT5G10510.5 | 42.487 | 193 | 73 | 7 | 26 | 203 | 226 | 395 | 7.97e-28 | 113 |
| Msa0664150 | AT5G10510.1 | 42.487 | 193 | 73 | 7 | 26 | 203 | 249 | 418 | 9.56e-28 | 113 |
| Msa0664150 | AT5G10510.6 | 42.487 | 193 | 73 | 7 | 26 | 203 | 264 | 433 | 9.84e-28 | 113 |
| Msa0664150 | AT5G10510.4 | 42.487 | 193 | 73 | 7 | 26 | 203 | 264 | 433 | 9.84e-28 | 113 |
| Msa0664150 | AT1G16060.2 | 41.304 | 230 | 89 | 8 | 101 | 309 | 1 | 205 | 1.96e-27 | 107 |
| Msa0664150 | AT1G16060.4 | 41.304 | 230 | 89 | 8 | 101 | 309 | 1 | 205 | 1.96e-27 | 107 |
| Msa0664150 | AT1G16060.6 | 41.304 | 230 | 89 | 8 | 101 | 309 | 1 | 205 | 1.96e-27 | 107 |
| Msa0664150 | AT1G16060.5 | 41.304 | 230 | 89 | 8 | 101 | 309 | 1 | 205 | 1.96e-27 | 107 |
| Msa0664150 | AT2G41710.4 | 51.327 | 113 | 41 | 2 | 26 | 128 | 66 | 174 | 6.80e-26 | 107 |
| Msa0664150 | AT2G41710.1 | 49.167 | 120 | 47 | 2 | 26 | 135 | 66 | 181 | 7.76e-26 | 106 |
| Msa0664150 | AT2G41710.3 | 52.475 | 101 | 38 | 1 | 45 | 135 | 116 | 216 | 2.74e-25 | 105 |
| Msa0664150 | AT5G10510.3 | 38.498 | 213 | 73 | 7 | 26 | 203 | 264 | 453 | 4.23e-25 | 105 |
| Msa0664150 | AT2G41710.2 | 47.200 | 125 | 47 | 3 | 26 | 135 | 66 | 186 | 1.33e-23 | 100 |
| Msa0664150 | AT2G28550.3 | 35.398 | 226 | 126 | 4 | 45 | 268 | 164 | 371 | 7.31e-22 | 95.9 |
| Msa0664150 | AT4G36920.1 | 38.710 | 186 | 97 | 3 | 45 | 228 | 142 | 312 | 6.05e-19 | 87.0 |
| Msa0664150 | AT4G36920.2 | 38.710 | 186 | 97 | 3 | 45 | 228 | 142 | 312 | 6.05e-19 | 87.0 |
| Msa0664150 | AT2G28550.1 | 32.743 | 226 | 117 | 3 | 45 | 268 | 164 | 356 | 7.20e-18 | 84.3 |
| Msa0664150 | AT5G67180.3 | 40.645 | 155 | 75 | 3 | 45 | 198 | 107 | 245 | 1.22e-17 | 81.6 |
| Msa0664150 | AT5G67180.2 | 40.645 | 155 | 75 | 3 | 45 | 198 | 107 | 245 | 1.31e-17 | 82.0 |
| Msa0664150 | AT5G67180.1 | 37.430 | 179 | 94 | 4 | 45 | 221 | 107 | 269 | 1.60e-17 | 82.4 |
| Msa0664150 | AT2G28550.5 | 30.570 | 193 | 99 | 3 | 78 | 268 | 31 | 190 | 1.28e-16 | 79.0 |
| Msa0664150 | AT2G39250.2 | 40.860 | 93 | 51 | 2 | 45 | 135 | 119 | 209 | 1.10e-14 | 72.8 |
| Msa0664150 | AT2G39250.1 | 40.860 | 93 | 51 | 2 | 45 | 135 | 119 | 209 | 1.11e-14 | 73.9 |
| Msa0664150 | AT3G54320.2 | 51.887 | 106 | 33 | 4 | 101 | 204 | 1 | 90 | 1.50e-12 | 67.4 |
| Msa0664150 | AT2G28550.4 | 45.263 | 95 | 52 | 0 | 45 | 139 | 164 | 258 | 1.76e-12 | 67.4 |
| Msa0664150 | AT1G16060.7 | 38.854 | 157 | 68 | 4 | 172 | 309 | 36 | 183 | 2.02e-12 | 65.5 |
| Msa0664150 | AT2G28550.2 | 45.263 | 95 | 52 | 0 | 45 | 139 | 164 | 258 | 2.15e-12 | 66.6 |
| Msa0664150 | AT2G28550.6 | 45.263 | 95 | 52 | 0 | 45 | 139 | 164 | 258 | 2.15e-12 | 66.6 |
| Msa0664150 | AT5G67180.4 | 44.211 | 95 | 53 | 0 | 45 | 139 | 107 | 201 | 2.91e-11 | 63.2 |
Find 63 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAACATGTCTTCGAATTT+TGG | 0.115041 | 4_4:+3184035 | None:intergenic |
| CTTTGTGGAGGTGAGTTTCT+TGG | 0.219994 | 4_4:+3190248 | None:intergenic |
| TATTTATACCTTGGAACTTA+TGG | 0.227175 | 4_4:-3186991 | Msa0664150:CDS |
| AATGATGATGACAACATATT+TGG | 0.301779 | 4_4:-3183885 | Msa0664150:CDS |
| AAAATTGTTTGAATATCTTC+TGG | 0.307325 | 4_4:+3183939 | None:intergenic |
| TTAATAACTAAACCTTCTTA+AGG | 0.317560 | 4_4:+3189251 | None:intergenic |
| GCTCGAATTGGCAGGGTCTT+CGG | 0.404820 | 4_4:-3187021 | Msa0664150:CDS |
| ATTTGTGGGATAAGAATTGC+TGG | 0.413847 | 4_4:-3190079 | Msa0664150:CDS |
| GGCAACAAATATTTATACCT+TGG | 0.417814 | 4_4:-3187000 | Msa0664150:CDS |
| ACTTGGCAGCATTGAAGTAC+TGG | 0.425678 | 4_4:-3189539 | Msa0664150:CDS |
| CTTCAATGCTGCCAAGTCAT+AGG | 0.425738 | 4_4:+3189545 | None:intergenic |
| CTATAAACTGAGCTTCTTTG+TGG | 0.430666 | 4_4:+3190233 | None:intergenic |
| AATATATTGGATCCTTAAGA+AGG | 0.444800 | 4_4:-3189263 | Msa0664150:intron |
| GATGGGAAGCTCGAATTGGC+AGG | 0.455003 | 4_4:-3187029 | Msa0664150:CDS |
| CAGTCAAAAGAAGAATATAT+TGG | 0.457176 | 4_4:-3189276 | Msa0664150:CDS |
| GTCGATATGAAGCTCATTTG+TGG | 0.470406 | 4_4:-3190094 | Msa0664150:CDS |
| TCGATATGAAGCTCATTTGT+GGG | 0.480300 | 4_4:-3190093 | Msa0664150:CDS |
| CGTGGAATGGTTGATTTGAC+AGG | 0.483312 | 4_4:+3183972 | None:intergenic |
| TTTCACCGCGGTGGTGGAAG+AGG | 0.486245 | 4_4:+3190289 | None:intergenic |
| ATTATCAAGAGGAGCTCAAA+GGG | 0.490116 | 4_4:-3189308 | Msa0664150:CDS |
| GGAAGATGGGAAGCTCGAAT+TGG | 0.493895 | 4_4:-3187033 | Msa0664150:CDS |
| GACACCACCACAATGGAAGA+TGG | 0.496318 | 4_4:-3187047 | Msa0664150:CDS |
| CTTGGCAGCATTGAAGTACT+GGG | 0.500070 | 4_4:-3189538 | Msa0664150:CDS |
| TGCTAGCAATAATCAAGAGC+TGG | 0.512163 | 4_4:-3184123 | Msa0664150:CDS |
| CTGGATCTTAATCAAGAACT+TGG | 0.515101 | 4_4:-3184104 | Msa0664150:CDS |
| TGCAGCACGTGCCTATGACT+TGG | 0.516501 | 4_4:-3189556 | Msa0664150:CDS |
| TTTACGTTTCACCGCGGTGG+TGG | 0.525503 | 4_4:+3190283 | None:intergenic |
| ATGGCAGCAATAGAGTATAG+AGG | 0.527216 | 4_4:-3184241 | Msa0664150:CDS |
| GAAAATTGAGAATTGTGTCT+TGG | 0.528761 | 4_4:+3189514 | None:intergenic |
| AATATTGTTATAGACATCGT+TGG | 0.529117 | 4_4:-3190120 | Msa0664150:intron |
| GTTAGAAAATTCATCGTCAT+CGG | 0.529129 | 4_4:-3184018 | Msa0664150:CDS |
| ATAAGATCAGTCGAAGATGC+TGG | 0.558029 | 4_4:+3184068 | None:intergenic |
| TGGAAATGTCCGACGTGGAA+TGG | 0.559065 | 4_4:+3183959 | None:intergenic |
| ATGGTTGATTTGACAGGCGG+TGG | 0.564133 | 4_4:+3183978 | None:intergenic |
| GATCTTAATCAAGAACTTGG+TGG | 0.566882 | 4_4:-3184101 | Msa0664150:CDS |
| TGAAAATCATATATAGTGAG+TGG | 0.570914 | 4_4:+3186963 | None:intergenic |
| TCAAGAGGAGCTCAAAGGGA+TGG | 0.574531 | 4_4:-3189304 | Msa0664150:CDS |
| GAGGAGCTCAAAGGGATGGA+AGG | 0.577439 | 4_4:-3189300 | Msa0664150:CDS |
| CTTCCCATCTTCCATTGTGG+TGG | 0.578979 | 4_4:+3187043 | None:intergenic |
| ACACCACCACAATGGAAGAT+GGG | 0.584570 | 4_4:-3187046 | Msa0664150:CDS |
| AATTATCAAGAGGAGCTCAA+AGG | 0.585976 | 4_4:-3189309 | Msa0664150:CDS |
| TGCTGCCATGTCATAAGCTG+TGG | 0.586967 | 4_4:+3184255 | None:intergenic |
| TTAGGTATCAAATTATCAAG+AGG | 0.587787 | 4_4:-3189319 | Msa0664150:intron |
| GAGCTTCCCATCTTCCATTG+TGG | 0.592861 | 4_4:+3187040 | None:intergenic |
| TTGTTATAGACATCGTTGGA+CGG | 0.600675 | 4_4:-3190116 | Msa0664150:intron |
| ACGTTTACGTTTCACCGCGG+TGG | 0.605690 | 4_4:+3190280 | None:intergenic |
| TGGAAGTACCATAAGTTCCA+AGG | 0.606508 | 4_4:+3186983 | None:intergenic |
| TGGCAGCAATAGAGTATAGA+GGG | 0.606682 | 4_4:-3184240 | Msa0664150:CDS |
| CTTAATCAAGAACTTGGTGG+TGG | 0.608278 | 4_4:-3184098 | Msa0664150:CDS |
| TAAACTGAGCTTCTTTGTGG+AGG | 0.608474 | 4_4:+3190236 | None:intergenic |
| ATCAGTCGAAGATGCTGGTG+TGG | 0.611842 | 4_4:+3184073 | None:intergenic |
| ACTAAGATCAAAGTTTGTAA+CGG | 0.614633 | 4_4:+3184210 | None:intergenic |
| TTCTTCCTCTTCCACCACCG+CGG | 0.640893 | 4_4:-3190294 | Msa0664150:CDS |
| ATGGGAAGCTCGAATTGGCA+GGG | 0.643491 | 4_4:-3187028 | Msa0664150:CDS |
| AGCAGCCACAGCTTATGACA+TGG | 0.655956 | 4_4:-3184260 | Msa0664150:CDS |
| ATGTTTAGACACCACCACAA+TGG | 0.660446 | 4_4:-3187054 | Msa0664150:intron |
| TCACAAAGCAAGAAAAGACA+AGG | 0.664452 | 4_4:-3190050 | Msa0664150:intron |
| GGAATGGTTGATTTGACAGG+CGG | 0.690559 | 4_4:+3183975 | None:intergenic |
| TCTTCTGGAAATGTCCGACG+TGG | 0.691543 | 4_4:+3183954 | None:intergenic |
| AGAGGAGTCTCAAAATACAG+AGG | 0.710309 | 4_4:-3188991 | Msa0664150:intron |
| TTGGCAGCATTGAAGTACTG+GGG | 0.726529 | 4_4:-3189537 | Msa0664150:CDS |
| TCAAATCAACCATTCCACGT+CGG | 0.751359 | 4_4:-3183968 | Msa0664150:CDS |
| TTTACGTTTACGTTTCACCG+CGG | 0.779773 | 4_4:+3190277 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATAAATATTAAAATACTAT+AGG | - | chr4_4:3186337-3186356 | Msa0664150:intron | 10.0% |
| !! | AACTAAATAGTAAAAAATAA+AGG | - | chr4_4:3186616-3186635 | Msa0664150:intron | 10.0% |
| !! | ACTAAATAGTAAAAAATAAA+GGG | - | chr4_4:3186617-3186636 | Msa0664150:intron | 10.0% |
| !!! | TTTAACATATTATGTTTTTA+GGG | - | chr4_4:3186783-3186802 | Msa0664150:intron | 10.0% |
| !!! | TTTTTTTATGACAAAAAAAT+GGG | - | chr4_4:3186984-3187003 | Msa0664150:CDS | 10.0% |
| !! | TTAATTAGATGAATTTAATA+CGG | + | chr4_4:3187379-3187398 | None:intergenic | 10.0% |
| !!! | AATATTTTATTAGAGTTTTT+TGG | + | chr4_4:3187692-3187711 | None:intergenic | 10.0% |
| !! | AATTAATTTACTTACTAATT+AGG | - | chr4_4:3189005-3189024 | Msa0664150:CDS | 10.0% |
| !!! | TGTTTTAAAAATTGTTGATT+TGG | - | chr4_4:3184347-3184366 | Msa0664150:intron | 15.0% |
| !! | AAAAAAATGAAGATATATGA+AGG | + | chr4_4:3184699-3184718 | None:intergenic | 15.0% |
| !!! | TTCATATATCTTCATTTTTT+TGG | - | chr4_4:3184698-3184717 | Msa0664150:intron | 15.0% |
| !! | ATGCATATAAATTTCATATA+TGG | + | chr4_4:3184769-3184788 | None:intergenic | 15.0% |
| !! | AATCCTTATATTAAATCTAA+TGG | - | chr4_4:3184996-3185015 | Msa0664150:intron | 15.0% |
| !!! | ATATTGTTTGATTCATTTTA+AGG | + | chr4_4:3185288-3185307 | None:intergenic | 15.0% |
| !! | AAATGAATCAAACAATATAT+TGG | - | chr4_4:3185290-3185309 | Msa0664150:intron | 15.0% |
| !!! | ATATTTTTGTTTTAAATGTG+AGG | - | chr4_4:3185314-3185333 | Msa0664150:intron | 15.0% |
| !! | TAAAAATATCAATTTCTGTT+TGG | + | chr4_4:3185630-3185649 | None:intergenic | 15.0% |
| !! | AAATTACAAAGATATCAATA+TGG | - | chr4_4:3185704-3185723 | Msa0664150:intron | 15.0% |
| !! | AATTACAAAGATATCAATAT+GGG | - | chr4_4:3185705-3185724 | Msa0664150:intron | 15.0% |
| !!! | ACATTTATATTCTTTTTTGA+AGG | - | chr4_4:3186176-3186195 | Msa0664150:intron | 15.0% |
| !!! | ATTTCTAAAAACATAAATAC+AGG | + | chr4_4:3186239-3186258 | None:intergenic | 15.0% |
| !!! | AATTCAAGTTCAATAAATAT+TGG | - | chr4_4:3186291-3186310 | Msa0664150:intron | 15.0% |
| !!! | ATAAATATTGGAATTTTAGT+TGG | - | chr4_4:3186303-3186322 | Msa0664150:intron | 15.0% |
| !!! | CTTTAACATATTATGTTTTT+AGG | - | chr4_4:3186782-3186801 | Msa0664150:intron | 15.0% |
| !! | AATTCAACATGAAATTTATT+TGG | + | chr4_4:3186917-3186936 | None:intergenic | 15.0% |
| !!! | CATTTTTTTGTCATAAAAAA+AGG | + | chr4_4:3186985-3187004 | None:intergenic | 15.0% |
| !!! | CTTTTTTTATGACAAAAAAA+TGG | - | chr4_4:3186983-3187002 | Msa0664150:CDS | 15.0% |
| !! | ATTACCAAAACAAAAATATA+TGG | + | chr4_4:3187054-3187073 | None:intergenic | 15.0% |
| !!! | TTTTGTTTTGGTAATTAAAT+TGG | - | chr4_4:3187059-3187078 | Msa0664150:intron | 15.0% |
| !! | TAATTAGATGAATTTAATAC+GGG | + | chr4_4:3187378-3187397 | None:intergenic | 15.0% |
| !!! | TGATTATGTATAATTGATTT+TGG | - | chr4_4:3187779-3187798 | Msa0664150:intron | 15.0% |
| !!! | CCTTAATTTTTTACTATATT+GGG | - | chr4_4:3188309-3188328 | Msa0664150:intron | 15.0% |
| !!! | ATCTATCTGTTTTTATTTAT+GGG | + | chr4_4:3188506-3188525 | None:intergenic | 15.0% |
| !!! | AATCTATCTGTTTTTATTTA+TGG | + | chr4_4:3188507-3188526 | None:intergenic | 15.0% |
| !! | TAAAAACTTATGCTATAATT+GGG | + | chr4_4:3188550-3188569 | None:intergenic | 15.0% |
| !! | ATAAAAACTTATGCTATAAT+TGG | + | chr4_4:3188551-3188570 | None:intergenic | 15.0% |
| !! | ATATATAAAAAAGAAATGGA+CGG | - | chr4_4:3189065-3189084 | Msa0664150:intron | 15.0% |
| !! | GTTATAGTTTGAAAATAAAA+TGG | + | chr4_4:3189320-3189339 | None:intergenic | 15.0% |
| !! | AAGTATGTATTAATTTATCT+CGG | - | chr4_4:3189705-3189724 | Msa0664150:intron | 15.0% |
| !!! | TTTTGTTATGTTGTTTTTGT+TGG | - | chr4_4:3184247-3184266 | Msa0664150:CDS | 20.0% |
| !!! | GATCAATAATTATTTTCGTT+AGG | + | chr4_4:3184451-3184470 | None:intergenic | 20.0% |
| !!! | TCAATTCTTAAAATGGATTT+TGG | + | chr4_4:3184509-3184528 | None:intergenic | 20.0% |
| !! | AGCAATATATCATCATTATT+TGG | - | chr4_4:3184721-3184740 | Msa0664150:intron | 20.0% |
| !! | TATCATCATTATTTGGTAAA+AGG | - | chr4_4:3184728-3184747 | Msa0664150:intron | 20.0% |
| !!! | TATATGTGTGTGTTTTATTT+TGG | - | chr4_4:3184827-3184846 | Msa0664150:intron | 20.0% |
| !! | TTAATAACTAAACCTTCTTA+AGG | + | chr4_4:3184923-3184942 | None:intergenic | 20.0% |
| !! | CAACCATTAGATTTAATATA+AGG | + | chr4_4:3185002-3185021 | None:intergenic | 20.0% |
| !! | CTTATATTAAATCTAATGGT+TGG | - | chr4_4:3185000-3185019 | Msa0664150:intron | 20.0% |
| !!! | ATACTGAATGACTTTTATTA+TGG | - | chr4_4:3185087-3185106 | Msa0664150:intron | 20.0% |
| !! | TTAAACAATCTATTTGTGAA+AGG | + | chr4_4:3185506-3185525 | None:intergenic | 20.0% |
| !!! | TTTCTTTTTAGAAAAGAAAG+AGG | - | chr4_4:3185659-3185678 | Msa0664150:intron | 20.0% |
| !!! | ATACTAAAAGTGTAAATTAG+AGG | + | chr4_4:3186037-3186056 | None:intergenic | 20.0% |
| !! | TACATCACACTAATTTATTA+AGG | + | chr4_4:3186555-3186574 | None:intergenic | 20.0% |
| !!! | TTTTATAAACCACTTTTTGT+AGG | + | chr4_4:3186586-3186605 | None:intergenic | 20.0% |
| !!! | GTTTTTATAGGTACTTATAT+AGG | - | chr4_4:3187255-3187274 | Msa0664150:intron | 20.0% |
| !! | TAGAACAAAAAAAGATACTA+TGG | - | chr4_4:3187420-3187439 | Msa0664150:intron | 20.0% |
| !! | AGTATAATTAATTATGCCAT+TGG | + | chr4_4:3187938-3187957 | None:intergenic | 20.0% |
| !!! | TACATATATCACTACTTTTT+TGG | + | chr4_4:3188003-3188022 | None:intergenic | 20.0% |
| !!! | TTCATTTTCTCTTTTCTTAT+TGG | - | chr4_4:3188053-3188072 | Msa0664150:intron | 20.0% |
| !!! | GCCTTAATTTTTTACTATAT+TGG | - | chr4_4:3188308-3188327 | Msa0664150:intron | 20.0% |
| !! | CCCAATATAGTAAAAAATTA+AGG | + | chr4_4:3188312-3188331 | None:intergenic | 20.0% |
| !!! | AATGCAAAATTGCTTTTTTT+GGG | + | chr4_4:3188373-3188392 | None:intergenic | 20.0% |
| !!! | AAAAAAAGCAATTTTGCATT+GGG | - | chr4_4:3188373-3188392 | Msa0664150:intron | 20.0% |
| !!! | TACTATTTTGTTATCTTTGT+AGG | + | chr4_4:3188728-3188747 | None:intergenic | 20.0% |
| !! | AAAGATAACAAAATAGTAGT+AGG | - | chr4_4:3188730-3188749 | Msa0664150:intron | 20.0% |
| !! | AATTAATTAATCTCAACATG+CGG | + | chr4_4:3188993-3189012 | None:intergenic | 20.0% |
| !! | CATTCTCTTGTATATAAAAT+TGG | + | chr4_4:3189100-3189119 | None:intergenic | 20.0% |
| !! | TTATAAATTGTAATAGTGAC+GGG | + | chr4_4:3189355-3189374 | None:intergenic | 20.0% |
| !! | CTTATAAATTGTAATAGTGA+CGG | + | chr4_4:3189356-3189375 | None:intergenic | 20.0% |
| !! | CATTCAATTAATGATGTATA+AGG | + | chr4_4:3189435-3189454 | None:intergenic | 20.0% |
| !! | ATAGTACAATTCATATTTGT+TGG | - | chr4_4:3189501-3189520 | Msa0664150:intron | 20.0% |
| !!! | ACTTTTTTTTTGACAAACTT+AGG | - | chr4_4:3189558-3189577 | Msa0664150:CDS | 20.0% |
| !!! | TAATCAATCAGTTATTTCTA+TGG | + | chr4_4:3189792-3189811 | None:intergenic | 20.0% |
| !! | AAAATTGTTTGAATATCTTC+TGG | + | chr4_4:3190235-3190254 | None:intergenic | 20.0% |
| ! | AATATTGTTATAGACATCGT+TGG | - | chr4_4:3184051-3184070 | Msa0664150:CDS | 25.0% |
| !!! | TCCATTTTAAGAATTGAAAG+TGG | - | chr4_4:3184512-3184531 | Msa0664150:intron | 25.0% |
| ! | TCCACTTTCAATTCTTAAAA+TGG | + | chr4_4:3184516-3184535 | None:intergenic | 25.0% |
| ! | ATATTTAATGACTGCAAAGT+TGG | - | chr4_4:3184556-3184575 | Msa0664150:intron | 25.0% |
| ! | TATTTAATGACTGCAAAGTT+GGG | - | chr4_4:3184557-3184576 | Msa0664150:intron | 25.0% |
| !!! | GTGTGTTTTATTTTGGTTTT+AGG | - | chr4_4:3184834-3184853 | Msa0664150:intron | 25.0% |
| ! | TTAGGTATCAAATTATCAAG+AGG | - | chr4_4:3184852-3184871 | Msa0664150:intron | 25.0% |
| !! | CAATATATTCTTCTTTTGAC+TGG | + | chr4_4:3184897-3184916 | None:intergenic | 25.0% |
| ! | CAGTCAAAAGAAGAATATAT+TGG | - | chr4_4:3184895-3184914 | Msa0664150:intron | 25.0% |
| ! | AATATATTGGATCCTTAAGA+AGG | - | chr4_4:3184908-3184927 | Msa0664150:intron | 25.0% |
| ! | TTGTGGAGAATCATATTATA+AGG | + | chr4_4:3184949-3184968 | None:intergenic | 25.0% |
| ! | TAGAAAAATTGTAGAGTTTG+TGG | + | chr4_4:3184966-3184985 | None:intergenic | 25.0% |
| ! | AAGTTGTTGAATTAATCTAG+TGG | + | chr4_4:3185046-3185065 | None:intergenic | 25.0% |
| ! | GATTAATTCAACAACTTTGA+TGG | - | chr4_4:3185049-3185068 | Msa0664150:intron | 25.0% |
| !! | TCATTTTGCAATGAAAATAG+TGG | + | chr4_4:3185218-3185237 | None:intergenic | 25.0% |
| ! | ACGATATACTCTCTTTAATT+TGG | - | chr4_4:3185426-3185445 | Msa0664150:intron | 25.0% |
| ! | GTGAAAGGTAATATCAAAAA+GGG | + | chr4_4:3185491-3185510 | None:intergenic | 25.0% |
| ! | TGTGAAAGGTAATATCAAAA+AGG | + | chr4_4:3185492-3185511 | None:intergenic | 25.0% |
| ! | AATTTCTGTTTGGAAATTGA+GGG | + | chr4_4:3185620-3185639 | None:intergenic | 25.0% |
| ! | CTAGTAAAAAATAAGCTAGT+TGG | - | chr4_4:3185750-3185769 | Msa0664150:intron | 25.0% |
| !! | ATATGAGAGTGATTTTTCTT+TGG | + | chr4_4:3185794-3185813 | None:intergenic | 25.0% |
| !! | ATAATAATTGACTTCACGAT+AGG | - | chr4_4:3185839-3185858 | Msa0664150:intron | 25.0% |
| ! | TAGTAATATGTTTATGGTTG+TGG | + | chr4_4:3185919-3185938 | None:intergenic | 25.0% |
| ! | AAATTTGTAGTGTTTATGTG+TGG | + | chr4_4:3185973-3185992 | None:intergenic | 25.0% |
| ! | TGAATTTGATCCATAAAACT+CGG | + | chr4_4:3186277-3186296 | None:intergenic | 25.0% |
| !!! | CCTTCATACTTATTAGTTTT+AGG | + | chr4_4:3186824-3186843 | None:intergenic | 25.0% |
| ! | CCTAAAACTAATAAGTATGA+AGG | - | chr4_4:3186821-3186840 | Msa0664150:intron | 25.0% |
| ! | AGTTATAGTAGTAACTCATA+AGG | + | chr4_4:3186848-3186867 | None:intergenic | 25.0% |
| !! | TTTTAGCATTTCTCAATACA+AGG | - | chr4_4:3186935-3186954 | Msa0664150:intron | 25.0% |
| ! | AATGTAAATGTCAATAGGAA+TGG | + | chr4_4:3187026-3187045 | None:intergenic | 25.0% |
| ! | CCAAAACAAAAATATATGGA+GGG | + | chr4_4:3187050-3187069 | None:intergenic | 25.0% |
| ! | ACCAAAACAAAAATATATGG+AGG | + | chr4_4:3187051-3187070 | None:intergenic | 25.0% |
| !!! | TGTTTTGGTAATTAAATTGG+TGG | - | chr4_4:3187062-3187081 | Msa0664150:intron | 25.0% |
| ! | TATTTATACCTTGGAACTTA+TGG | - | chr4_4:3187180-3187199 | Msa0664150:intron | 25.0% |
| ! | TGAAAATCATATATAGTGAG+TGG | + | chr4_4:3187211-3187230 | None:intergenic | 25.0% |
| ! | TATTAACACACCTTATTCTT+AGG | - | chr4_4:3187307-3187326 | Msa0664150:intron | 25.0% |
| !!! | ATGTCATTTTCATATGCATT+TGG | - | chr4_4:3187528-3187547 | Msa0664150:intron | 25.0% |
| ! | ACACAAAGTTACTATACTAA+AGG | - | chr4_4:3187714-3187733 | Msa0664150:intron | 25.0% |
| !! | TTTTTCTTTCTCTATTGCTT+TGG | + | chr4_4:3188080-3188099 | None:intergenic | 25.0% |
| ! | AAAGCAATAGAGAAAGAAAA+AGG | - | chr4_4:3188079-3188098 | Msa0664150:intron | 25.0% |
| !!! | GGATTAGAATTGATTTTGAA+AGG | + | chr4_4:3188180-3188199 | None:intergenic | 25.0% |
| !!! | TGTTTTGTTTCTCTTTTAGA+TGG | + | chr4_4:3188201-3188220 | None:intergenic | 25.0% |
| !!! | CAATGCAAAATTGCTTTTTT+TGG | + | chr4_4:3188374-3188393 | None:intergenic | 25.0% |
| !! | CAAAAAAAGCAATTTTGCAT+TGG | - | chr4_4:3188372-3188391 | Msa0664150:intron | 25.0% |
| ! | AATATGCAATCAAATCTAGT+TGG | - | chr4_4:3188769-3188788 | Msa0664150:intron | 25.0% |
| ! | TTTATTAAGCAGTTGAAGTT+TGG | + | chr4_4:3188810-3188829 | None:intergenic | 25.0% |
| !!! | TCAAAAAAAAGCTTTGAGTA+AGG | - | chr4_4:3188965-3188984 | Msa0664150:intron | 25.0% |
| !! | TATTGTCACTTAATATTGCA+AGG | - | chr4_4:3189234-3189253 | Msa0664150:intron | 25.0% |
| ! | TATAAATTGTAATAGTGACG+GGG | + | chr4_4:3189354-3189373 | None:intergenic | 25.0% |
| !! | ACTCTCTTGTTATATAATTG+AGG | - | chr4_4:3189653-3189672 | Msa0664150:intron | 25.0% |
| !! | CTCTCTTGTTATATAATTGA+GGG | - | chr4_4:3189654-3189673 | Msa0664150:intron | 25.0% |
| !!! | TTTTTTGTGTGTAGTAAATC+CGG | + | chr4_4:3189682-3189701 | None:intergenic | 25.0% |
| ! | ATCCATTTATGTTTGTGTTA+TGG | - | chr4_4:3189870-3189889 | Msa0664150:intron | 25.0% |
| ! | ACTAAGATCAAAGTTTGTAA+CGG | + | chr4_4:3189964-3189983 | None:intergenic | 25.0% |
| !! | AATGATGATGACAACATATT+TGG | - | chr4_4:3190286-3190305 | Msa0664150:CDS | 25.0% |
| ACAAAGAAGCTCAGTTTATA+GGG | - | chr4_4:3183940-3183959 | Msa0664150:CDS | 30.0% | |
| !!! | GTTTTTGTGTCCTCTAAAAT+TGG | - | chr4_4:3184018-3184037 | Msa0664150:CDS | 30.0% |
| ! | ATGAATGCTACCAATTTTAG+AGG | + | chr4_4:3184031-3184050 | None:intergenic | 30.0% |
| !!! | TATGTTGTTTTTGTTGGTGA+TGG | - | chr4_4:3184253-3184272 | Msa0664150:CDS | 30.0% |
| GACACAAATTAATCATACCT+AGG | + | chr4_4:3184303-3184322 | None:intergenic | 30.0% | |
| ATGTCAAATGAGTTTAGTGA+AGG | - | chr4_4:3184398-3184417 | Msa0664150:intron | 30.0% | |
| !!! | AAAGTTGGGTTTGTTTTGTT+AGG | - | chr4_4:3184571-3184590 | Msa0664150:intron | 30.0% |
| !!! | AAGTTGGGTTTGTTTTGTTA+GGG | - | chr4_4:3184572-3184591 | Msa0664150:intron | 30.0% |
| GAAAATTGAGAATTGTGTCT+TGG | + | chr4_4:3184660-3184679 | None:intergenic | 30.0% | |
| CAATTTCTGTTTGGAAATTG+AGG | + | chr4_4:3185621-3185640 | None:intergenic | 30.0% | |
| ! | TGTAATTTCCTTCCTTTTCT+AGG | + | chr4_4:3185692-3185711 | None:intergenic | 30.0% |
| !!! | GCTTATTTTTTACTAGTGAC+CGG | + | chr4_4:3185746-3185765 | None:intergenic | 30.0% |
| ! | GATTCGTAAATTGTTGACTA+TGG | + | chr4_4:3185889-3185908 | None:intergenic | 30.0% |
| GGTGGTTAGTAATATGTTTA+TGG | + | chr4_4:3185925-3185944 | None:intergenic | 30.0% | |
| GTTGTGGGTAATTTATAATC+AGG | + | chr4_4:3185946-3185965 | None:intergenic | 30.0% | |
| GAATTTGATCCATAAAACTC+GGG | + | chr4_4:3186276-3186295 | None:intergenic | 30.0% | |
| TAGTCAAAATGTGCTTAAGT+AGG | - | chr4_4:3186369-3186388 | Msa0664150:intron | 30.0% | |
| AGTCTCATAGTAGATTTGAA+TGG | - | chr4_4:3186512-3186531 | Msa0664150:intron | 30.0% | |
| ATCAAAGATCCTACAAAAAG+TGG | - | chr4_4:3186574-3186593 | Msa0664150:intron | 30.0% | |
| ATTTCTCAATACAAGGTAGT+TGG | - | chr4_4:3186942-3186961 | Msa0664150:intron | 30.0% | |
| AAAATGGGTAACTACCTTTA+TGG | - | chr4_4:3186999-3187018 | Msa0664150:CDS | 30.0% | |
| AGGGTAATGTAAATGTCAAT+AGG | + | chr4_4:3187031-3187050 | None:intergenic | 30.0% | |
| !! | CCCTCCATATATTTTTGTTT+TGG | - | chr4_4:3187047-3187066 | Msa0664150:CDS | 30.0% |
| GGCAACAAATATTTATACCT+TGG | - | chr4_4:3187171-3187190 | Msa0664150:intron | 30.0% | |
| GTGTGTTAATAGTAGTATGT+AGG | + | chr4_4:3187298-3187317 | None:intergenic | 30.0% | |
| TGACATGAAACCTAAGAATA+AGG | + | chr4_4:3187320-3187339 | None:intergenic | 30.0% | |
| !! | TTGGATTTGGAAGCATTTAT+AGG | - | chr4_4:3187601-3187620 | Msa0664150:intron | 30.0% |
| TTGGAAGTGGATAATTGATT+TGG | + | chr4_4:3187984-3188003 | None:intergenic | 30.0% | |
| !!! | TATCACTACTTTTTTGGAAG+TGG | + | chr4_4:3187997-3188016 | None:intergenic | 30.0% |
| GAGAGAAAGTTGTAATAAAG+TGG | - | chr4_4:3188135-3188154 | Msa0664150:intron | 30.0% | |
| GTTGTAATAAAGTGGTTGTA+CGG | - | chr4_4:3188143-3188162 | Msa0664150:intron | 30.0% | |
| !! | GTTGTTCTCTAAAGTTTGTT+GGG | + | chr4_4:3188286-3188305 | None:intergenic | 30.0% |
| !! | AGTTGTTCTCTAAAGTTTGT+TGG | + | chr4_4:3188287-3188306 | None:intergenic | 30.0% |
| AATAGATTCCCGAAATTTCA+GGG | + | chr4_4:3188644-3188663 | None:intergenic | 30.0% | |
| AAATAGATTCCCGAAATTTC+AGG | + | chr4_4:3188645-3188664 | None:intergenic | 30.0% | |
| AATTTCGGGAATCTATTTGA+CGG | - | chr4_4:3188647-3188666 | Msa0664150:intron | 30.0% | |
| !!! | CCATTTTGAAATGAAGTAGT+AGG | + | chr4_4:3188704-3188723 | None:intergenic | 30.0% |
| CCTACTACTTCATTTCAAAA+TGG | - | chr4_4:3188701-3188720 | Msa0664150:intron | 30.0% | |
| ATAGTAGTAGGATAATCCAA+AGG | - | chr4_4:3188742-3188761 | Msa0664150:intron | 30.0% | |
| !!! | TGATTGCATATTTTGACCTT+TGG | + | chr4_4:3188761-3188780 | None:intergenic | 30.0% |
| TAGTTTGAATGAAAGACCTA+GGG | + | chr4_4:3188872-3188891 | None:intergenic | 30.0% | |
| ! | TTAGTTTGAATGAAAGACCT+AGG | + | chr4_4:3188873-3188892 | None:intergenic | 30.0% |
| CATTCATTAAATGACGTATG+TGG | - | chr4_4:3189396-3189415 | Msa0664150:intron | 30.0% | |
| AAAGTCTAAGTAGACATGAA+AGG | + | chr4_4:3189543-3189562 | None:intergenic | 30.0% | |
| TGTTATATAATTGAGGGATC+CGG | - | chr4_4:3189660-3189679 | Msa0664150:intron | 30.0% | |
| CTCCATAACACAAACATAAA+TGG | + | chr4_4:3189875-3189894 | None:intergenic | 30.0% | |
| !!! | TATTGCTAGCATTTTGACTA+CGG | + | chr4_4:3190039-3190058 | None:intergenic | 30.0% |
| ! | TCTAACATGTCTTCGAATTT+TGG | + | chr4_4:3190139-3190158 | None:intergenic | 30.0% |
| GTTAGAAAATTCATCGTCAT+CGG | - | chr4_4:3190153-3190172 | Msa0664150:intron | 30.0% | |
| ! | CTGCACCAATTTTTCATTAT+GGG | - | chr4_4:3190326-3190345 | Msa0664150:CDS | 30.0% |
| TCAAGCCCATAATGAAAAAT+TGG | + | chr4_4:3190334-3190353 | None:intergenic | 30.0% | |
| CTATAAACTGAGCTTCTTTG+TGG | + | chr4_4:3183941-3183960 | None:intergenic | 35.0% | |
| CACAAAGAAGCTCAGTTTAT+AGG | - | chr4_4:3183939-3183958 | Msa0664150:CDS | 35.0% | |
| CAAAGAAGCTCAGTTTATAG+GGG | - | chr4_4:3183941-3183960 | Msa0664150:CDS | 35.0% | |
| TTGTTATAGACATCGTTGGA+CGG | - | chr4_4:3184055-3184074 | Msa0664150:CDS | 35.0% | |
| TCGATATGAAGCTCATTTGT+GGG | - | chr4_4:3184078-3184097 | Msa0664150:CDS | 35.0% | |
| ATTTGTGGGATAAGAATTGC+TGG | - | chr4_4:3184092-3184111 | Msa0664150:CDS | 35.0% | |
| TCACAAAGCAAGAAAAGACA+AGG | - | chr4_4:3184121-3184140 | Msa0664150:CDS | 35.0% | |
| AATCGATATGCAGTATACCT+AGG | - | chr4_4:3184283-3184302 | Msa0664150:intron | 35.0% | |
| ! | TTTGGCATTGAGAAACCAAA+TGG | - | chr4_4:3184365-3184384 | Msa0664150:intron | 35.0% |
| AGTTTAGTGAAGGTCGAATT+AGG | - | chr4_4:3184408-3184427 | Msa0664150:intron | 35.0% | |
| ! | TTTTCGTTAGGACTCGAATT+TGG | + | chr4_4:3184439-3184458 | None:intergenic | 35.0% |
| !!! | AGTTGGGTTTGTTTTGTTAG+GGG | - | chr4_4:3184573-3184592 | Msa0664150:intron | 35.0% |
| AATTATCAAGAGGAGCTCAA+AGG | - | chr4_4:3184862-3184881 | Msa0664150:intron | 35.0% | |
| ATTATCAAGAGGAGCTCAAA+GGG | - | chr4_4:3184863-3184882 | Msa0664150:intron | 35.0% | |
| ATTCAACAACTTTGATGGAG+AGG | - | chr4_4:3185054-3185073 | Msa0664150:intron | 35.0% | |
| TCGATTTACAGAAAAAGCAG+TGG | - | chr4_4:3185150-3185169 | Msa0664150:intron | 35.0% | |
| !! | AAAAGCAGTGGATTTTCTAG+AGG | - | chr4_4:3185162-3185181 | Msa0664150:intron | 35.0% |
| !!! | TTTTTTACTAGTGACCGGAT+GGG | + | chr4_4:3185741-3185760 | None:intergenic | 35.0% |
| !!! | ATTTTTTACTAGTGACCGGA+TGG | + | chr4_4:3185742-3185761 | None:intergenic | 35.0% |
| ! | TGATTTTTCTTTGGTCTCTG+TGG | + | chr4_4:3185785-3185804 | None:intergenic | 35.0% |
| ! | ATTGTTGACTATGGATTGAG+AGG | + | chr4_4:3185880-3185899 | None:intergenic | 35.0% |
| GTGGGTAATTTATAATCAGG+TGG | + | chr4_4:3185943-3185962 | None:intergenic | 35.0% | |
| GTGTAAATTAGAGGATGTGA+TGG | + | chr4_4:3186028-3186047 | None:intergenic | 35.0% | |
| TCAATAGGAATGGACCATAA+AGG | + | chr4_4:3187016-3187035 | None:intergenic | 35.0% | |
| TAATACGGGTCTTAATCACA+TGG | + | chr4_4:3187364-3187383 | None:intergenic | 35.0% | |
| GCGAGCAAACACATTTAATT+TGG | - | chr4_4:3187472-3187491 | Msa0664150:intron | 35.0% | |
| TGGCTTCACATATTTGGATT+TGG | - | chr4_4:3187588-3187607 | Msa0664150:intron | 35.0% | |
| ! | ACCAAACTAGTCTAGTTCAA+TGG | - | chr4_4:3188593-3188612 | Msa0664150:intron | 35.0% |
| ! | TCCATTGAACTAGACTAGTT+TGG | + | chr4_4:3188597-3188616 | None:intergenic | 35.0% |
| TGTATCTACCCCTGAAATTT+CGG | - | chr4_4:3188632-3188651 | Msa0664150:intron | 35.0% | |
| ATAGATTCCCGAAATTTCAG+GGG | + | chr4_4:3188643-3188662 | None:intergenic | 35.0% | |
| TGATATCATTCTTTCACCCT+AGG | - | chr4_4:3188853-3188872 | Msa0664150:intron | 35.0% | |
| ATTAATACGTCGTCATAGGT+GGG | + | chr4_4:3188904-3188923 | None:intergenic | 35.0% | |
| AATTAATACGTCGTCATAGG+TGG | + | chr4_4:3188905-3188924 | None:intergenic | 35.0% | |
| GTCAATTAATACGTCGTCAT+AGG | + | chr4_4:3188908-3188927 | None:intergenic | 35.0% | |
| CTTATGCAAGCTTATGAGTA+AGG | - | chr4_4:3188937-3188956 | Msa0664150:intron | 35.0% | |
| GCAAGGTTAAATTCCTTTCA+CGG | - | chr4_4:3189251-3189270 | Msa0664150:intron | 35.0% | |
| CAAGGTTAAATTCCTTTCAC+GGG | - | chr4_4:3189252-3189271 | Msa0664150:intron | 35.0% | |
| AAGGTTAAATTCCTTTCACG+GGG | - | chr4_4:3189253-3189272 | Msa0664150:intron | 35.0% | |
| CTGGATCTTAATCAAGAACT+TGG | - | chr4_4:3190067-3190086 | Msa0664150:CDS | 35.0% | |
| GATCTTAATCAAGAACTTGG+TGG | - | chr4_4:3190070-3190089 | Msa0664150:CDS | 35.0% | |
| ! | GCTGCACCAATTTTTCATTA+TGG | - | chr4_4:3190325-3190344 | Msa0664150:CDS | 35.0% |
| TTTACGTTTACGTTTCACCG+CGG | + | chr4_4:3183897-3183916 | None:intergenic | 40.0% | |
| TAAACTGAGCTTCTTTGTGG+AGG | + | chr4_4:3183938-3183957 | None:intergenic | 40.0% | |
| GTCGATATGAAGCTCATTTG+TGG | - | chr4_4:3184077-3184096 | Msa0664150:CDS | 40.0% | |
| !!! | GTTTTTGTTGGTGATGGCAA+TGG | - | chr4_4:3184259-3184278 | Msa0664150:CDS | 40.0% |
| GACATTTGAATCCAGCCATT+TGG | + | chr4_4:3184383-3184402 | None:intergenic | 40.0% | |
| TGAAAGTGGATAGTAGCTAG+TGG | - | chr4_4:3184526-3184545 | Msa0664150:intron | 40.0% | |
| GAAAGTGGATAGTAGCTAGT+GGG | - | chr4_4:3184527-3184546 | Msa0664150:intron | 40.0% | |
| AGAGGAGTCTCAAAATACAG+AGG | - | chr4_4:3185180-3185199 | Msa0664150:intron | 40.0% | |
| ! | CAAAATACAGAGGTGTAGCA+AGG | - | chr4_4:3185190-3185209 | Msa0664150:intron | 40.0% |
| ! | TTCCTTCCTTTTCTAGGCTT+AGG | + | chr4_4:3185686-3185705 | None:intergenic | 40.0% |
| TTTATGTGTGGCAGAGTTGT+GGG | + | chr4_4:3185961-3185980 | None:intergenic | 40.0% | |
| ! | GTATCTTTGCCCGAGTTTTA+TGG | - | chr4_4:3186264-3186283 | Msa0664150:intron | 40.0% |
| !! | ACAAGGTAGTTGGTGACAAA+TGG | - | chr4_4:3186952-3186971 | Msa0664150:CDS | 40.0% |
| !! | CAAGGTAGTTGGTGACAAAT+GGG | - | chr4_4:3186953-3186972 | Msa0664150:CDS | 40.0% |
| ATGTTTAGACACCACCACAA+TGG | - | chr4_4:3187117-3187136 | Msa0664150:intron | 40.0% | |
| !! | TGGAAGTACCATAAGTTCCA+AGG | + | chr4_4:3187191-3187210 | None:intergenic | 40.0% |
| ! | ATCATTTCTGCCCATTTTCG+TGG | - | chr4_4:3187554-3187573 | Msa0664150:intron | 40.0% |
| ACACCTTTGTCCACGAAAAT+GGG | + | chr4_4:3187567-3187586 | None:intergenic | 40.0% | |
| TACACCTTTGTCCACGAAAA+TGG | + | chr4_4:3187568-3187587 | None:intergenic | 40.0% | |
| !! | TTTTCGTGGACAAAGGTGTA+TGG | - | chr4_4:3187568-3187587 | Msa0664150:intron | 40.0% |
| GGTGTATGGCTTCACATATT+TGG | - | chr4_4:3187582-3187601 | Msa0664150:intron | 40.0% | |
| TACTCTTTCCATGTGTCATC+AGG | + | chr4_4:3187637-3187656 | None:intergenic | 40.0% | |
| !! | GAATTGCTTTTCCTCGTAGT+AGG | + | chr4_4:3187916-3187935 | None:intergenic | 40.0% |
| ACGAGGAAAAGCAATTCCAA+TGG | - | chr4_4:3187919-3187938 | Msa0664150:intron | 40.0% | |
| !! | TCATGTTAACTTGTGCCCTA+AGG | - | chr4_4:3188332-3188351 | Msa0664150:intron | 40.0% |
| !! | CATGTTAACTTGTGCCCTAA+GGG | - | chr4_4:3188333-3188352 | Msa0664150:intron | 40.0% |
| TTCCTTAACATGTGCCCTTA+GGG | + | chr4_4:3188350-3188369 | None:intergenic | 40.0% | |
| TTCTTAACATGTGCCCTTGA+GGG | - | chr4_4:3188464-3188483 | Msa0664150:intron | 40.0% | |
| !! | ATGTTAACTTGTGCCCTCAA+GGG | + | chr4_4:3188480-3188499 | None:intergenic | 40.0% |
| !! | AATGTTAACTTGTGCCCTCA+AGG | + | chr4_4:3188481-3188500 | None:intergenic | 40.0% |
| GTATCTACCCCTGAAATTTC+GGG | - | chr4_4:3188633-3188652 | Msa0664150:intron | 40.0% | |
| TCTTGATTGCATTTGAAGGC+AGG | + | chr4_4:3188675-3188694 | None:intergenic | 40.0% | |
| CCTCTCTTGATTGCATTTGA+AGG | + | chr4_4:3188679-3188698 | None:intergenic | 40.0% | |
| CCTTCAAATGCAATCAAGAG+AGG | - | chr4_4:3188676-3188695 | Msa0664150:intron | 40.0% | |
| ! | AATTGTAATAGTGACGGGGA+GGG | + | chr4_4:3189350-3189369 | None:intergenic | 40.0% |
| ! | AAATTGTAATAGTGACGGGG+AGG | + | chr4_4:3189351-3189370 | None:intergenic | 40.0% |
| GTCTAAGTAGACATGAAAGG+AGG | + | chr4_4:3189540-3189559 | None:intergenic | 40.0% | |
| ATGGCAGCAATAGAGTATAG+AGG | - | chr4_4:3189930-3189949 | Msa0664150:intron | 40.0% | |
| TGGCAGCAATAGAGTATAGA+GGG | - | chr4_4:3189931-3189950 | Msa0664150:intron | 40.0% | |
| ATCGTCGTTGTCTTGTGTTT+AGG | + | chr4_4:3190008-3190027 | None:intergenic | 40.0% | |
| TGCTAGCAATAATCAAGAGC+TGG | - | chr4_4:3190048-3190067 | Msa0664150:intron | 40.0% | |
| ! | CTTAATCAAGAACTTGGTGG+TGG | - | chr4_4:3190073-3190092 | Msa0664150:CDS | 40.0% |
| ATAAGATCAGTCGAAGATGC+TGG | + | chr4_4:3190106-3190125 | None:intergenic | 40.0% | |
| TCAAATCAACCATTCCACGT+CGG | - | chr4_4:3190203-3190222 | Msa0664150:intron | 40.0% | |
| CTTTGTGGAGGTGAGTTTCT+TGG | + | chr4_4:3183926-3183945 | None:intergenic | 45.0% | |
| !! | CAGTTTATAGGGGTGTCACA+AGG | - | chr4_4:3183951-3183970 | Msa0664150:CDS | 45.0% |
| GCATTGAGAAACCAAATGGC+TGG | - | chr4_4:3184369-3184388 | Msa0664150:intron | 45.0% | |
| CTTGTTTCGTAGTCGAACTG+AGG | - | chr4_4:3184479-3184498 | Msa0664150:intron | 45.0% | |
| CTTCAATGCTGCCAAGTCAT+AGG | + | chr4_4:3184629-3184648 | None:intergenic | 45.0% | |
| ! | ACTTGGCAGCATTGAAGTAC+TGG | - | chr4_4:3184632-3184651 | Msa0664150:intron | 45.0% |
| ! | CTTGGCAGCATTGAAGTACT+GGG | - | chr4_4:3184633-3184652 | Msa0664150:intron | 45.0% |
| !! | TTGGCAGCATTGAAGTACTG+GGG | - | chr4_4:3184634-3184653 | Msa0664150:intron | 45.0% |
| AGAGGACCTAAGCCTAGAAA+AGG | - | chr4_4:3185677-3185696 | Msa0664150:intron | 45.0% | |
| GACCTAAGCCTAGAAAAGGA+AGG | - | chr4_4:3185681-3185700 | Msa0664150:intron | 45.0% | |
| GTTTATGTGTGGCAGAGTTG+TGG | + | chr4_4:3185962-3185981 | None:intergenic | 45.0% | |
| ! | TTAGAGGATGTGATGGTGAG+TGG | + | chr4_4:3186021-3186040 | None:intergenic | 45.0% |
| ATTAACCCATGATACCCACG+TGG | - | chr4_4:3186401-3186420 | Msa0664150:intron | 45.0% | |
| TTATCAGTAGCAGACCACGT+GGG | + | chr4_4:3186418-3186437 | None:intergenic | 45.0% | |
| TTTATCAGTAGCAGACCACG+TGG | + | chr4_4:3186419-3186438 | None:intergenic | 45.0% | |
| ACACCACCACAATGGAAGAT+GGG | - | chr4_4:3187125-3187144 | Msa0664150:intron | 45.0% | |
| TCATGTGTCCTGATGACACA+TGG | - | chr4_4:3187626-3187645 | Msa0664150:intron | 45.0% | |
| AAGTTGCAAGTCCTACTACG+AGG | - | chr4_4:3187902-3187921 | Msa0664150:intron | 45.0% | |
| GTTCCTTAACATGTGCCCTT+AGG | + | chr4_4:3188351-3188370 | None:intergenic | 45.0% | |
| CTTCTTAACATGTGCCCTTG+AGG | - | chr4_4:3188463-3188482 | Msa0664150:intron | 45.0% | |
| TGAAATGCTAACCCCGTGAA+AGG | + | chr4_4:3189267-3189286 | None:intergenic | 45.0% | |
| !! | GGAATGGTTGATTTGACAGG+CGG | + | chr4_4:3190199-3190218 | None:intergenic | 45.0% |
| !! | CGTGGAATGGTTGATTTGAC+AGG | + | chr4_4:3190202-3190221 | None:intergenic | 45.0% |
| !!! | TTTTTTTATTTTGTTTTTAT+AGG | - | chr4_4:3187243-3187262 | Msa0664150:intron | 5.0% |
| !! | ATTTATATATAAAAAAGAAA+TGG | - | chr4_4:3189061-3189080 | Msa0664150:intron | 5.0% |
| TCAAGAGGAGCTCAAAGGGA+TGG | - | chr4_4:3184867-3184886 | Msa0664150:intron | 50.0% | |
| GACACCACCACAATGGAAGA+TGG | - | chr4_4:3187124-3187143 | Msa0664150:intron | 50.0% | |
| CTTCCCATCTTCCATTGTGG+TGG | + | chr4_4:3187131-3187150 | None:intergenic | 50.0% | |
| GAGCTTCCCATCTTCCATTG+TGG | + | chr4_4:3187134-3187153 | None:intergenic | 50.0% | |
| GGAAGATGGGAAGCTCGAAT+TGG | - | chr4_4:3187138-3187157 | Msa0664150:intron | 50.0% | |
| ATGGGAAGCTCGAATTGGCA+GGG | - | chr4_4:3187143-3187162 | Msa0664150:intron | 50.0% | |
| GTGTTTGCTCGCTCACTCTT+TGG | + | chr4_4:3187464-3187483 | None:intergenic | 50.0% | |
| ! | CTGCCCATTTTCGTGGACAA+AGG | - | chr4_4:3187561-3187580 | Msa0664150:intron | 50.0% |
| AGGTGCATTTAGTCGTGCAG+TGG | - | chr4_4:3187734-3187753 | Msa0664150:intron | 50.0% | |
| GGTGCATTTAGTCGTGCAGT+GGG | - | chr4_4:3187735-3187754 | Msa0664150:intron | 50.0% | |
| GTGCATTTAGTCGTGCAGTG+GGG | - | chr4_4:3187736-3187755 | Msa0664150:intron | 50.0% | |
| ! | TGCCCTAAGGGCACATGTTA+AGG | - | chr4_4:3188345-3188364 | Msa0664150:intron | 50.0% |
| ! | TACGTCGTCATAGGTGGGTT+TGG | + | chr4_4:3188899-3188918 | None:intergenic | 50.0% |
| AGCAGCCACAGCTTATGACA+TGG | - | chr4_4:3189911-3189930 | Msa0664150:intron | 50.0% | |
| TGCTGCCATGTCATAAGCTG+TGG | + | chr4_4:3189919-3189938 | None:intergenic | 50.0% | |
| ATCAGTCGAAGATGCTGGTG+TGG | + | chr4_4:3190101-3190120 | None:intergenic | 50.0% | |
| !! | ATGGTTGATTTGACAGGCGG+TGG | + | chr4_4:3190196-3190215 | None:intergenic | 50.0% |
| TGGAAATGTCCGACGTGGAA+TGG | + | chr4_4:3190215-3190234 | None:intergenic | 50.0% | |
| ! | TCTTCTGGAAATGTCCGACG+TGG | + | chr4_4:3190220-3190239 | None:intergenic | 50.0% |
| TTCTTCCTCTTCCACCACCG+CGG | - | chr4_4:3183877-3183896 | Msa0664150:CDS | 55.0% | |
| TTTACGTTTCACCGCGGTGG+TGG | + | chr4_4:3183891-3183910 | None:intergenic | 55.0% | |
| ACGTTTACGTTTCACCGCGG+TGG | + | chr4_4:3183894-3183913 | None:intergenic | 55.0% | |
| TGCAGCACGTGCCTATGACT+TGG | - | chr4_4:3184615-3184634 | Msa0664150:intron | 55.0% | |
| GAGGAGCTCAAAGGGATGGA+AGG | - | chr4_4:3184871-3184890 | Msa0664150:intron | 55.0% | |
| TGGGAGAAGCAACTCCCATC+CGG | - | chr4_4:3185724-3185743 | Msa0664150:intron | 55.0% | |
| ! | GGATGTGATGGTGAGTGGCT+TGG | + | chr4_4:3186016-3186035 | None:intergenic | 55.0% |
| GCAGACCACGTGGGTATCAT+GGG | + | chr4_4:3186409-3186428 | None:intergenic | 55.0% | |
| AGCAGACCACGTGGGTATCA+TGG | + | chr4_4:3186410-3186429 | None:intergenic | 55.0% | |
| GATGGGAAGCTCGAATTGGC+AGG | - | chr4_4:3187142-3187161 | Msa0664150:intron | 55.0% | |
| GCTCGAATTGGCAGGGTCTT+CGG | - | chr4_4:3187150-3187169 | Msa0664150:intron | 55.0% | |
| !! | TTTCACCGCGGTGGTGGAAG+AGG | + | chr4_4:3183885-3183904 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 3183833 | 3190360 | 3183833 | ID=Msa0664150;Name=Msa0664150 |
| chr4_4 | mRNA | 3183833 | 3190360 | 3183833 | ID=Msa0664150-mRNA-1;Parent=Msa0664150;Name=Msa0664150-mRNA-1;_AED=0.25;_eAED=0.25;_QI=0|0.25|0.22|1|0.37|0.44|9|0|314 |
| chr4_4 | exon | 3190241 | 3190360 | 3190241 | ID=Msa0664150-mRNA-1:exon:1032;Parent=Msa0664150-mRNA-1 |
| chr4_4 | exon | 3190051 | 3190129 | 3190051 | ID=Msa0664150-mRNA-1:exon:1031;Parent=Msa0664150-mRNA-1 |
| chr4_4 | exon | 3189512 | 3189582 | 3189512 | ID=Msa0664150-mRNA-1:exon:1030;Parent=Msa0664150-mRNA-1 |
| chr4_4 | exon | 3189264 | 3189337 | 3189264 | ID=Msa0664150-mRNA-1:exon:1029;Parent=Msa0664150-mRNA-1 |
| chr4_4 | exon | 3188992 | 3189032 | 3188992 | ID=Msa0664150-mRNA-1:exon:1028;Parent=Msa0664150-mRNA-1 |
| chr4_4 | exon | 3186952 | 3187068 | 3186952 | ID=Msa0664150-mRNA-1:exon:1027;Parent=Msa0664150-mRNA-1 |
| chr4_4 | exon | 3186917 | 3186928 | 3186917 | ID=Msa0664150-mRNA-1:exon:1026;Parent=Msa0664150-mRNA-1 |
| chr4_4 | exon | 3184209 | 3184295 | 3184209 | ID=Msa0664150-mRNA-1:exon:1025;Parent=Msa0664150-mRNA-1 |
| chr4_4 | exon | 3183833 | 3184176 | 3183833 | ID=Msa0664150-mRNA-1:exon:1024;Parent=Msa0664150-mRNA-1 |
| chr4_4 | CDS | 3190241 | 3190360 | 3190241 | ID=Msa0664150-mRNA-1:cds;Parent=Msa0664150-mRNA-1 |
| chr4_4 | CDS | 3190051 | 3190129 | 3190051 | ID=Msa0664150-mRNA-1:cds;Parent=Msa0664150-mRNA-1 |
| chr4_4 | CDS | 3189512 | 3189582 | 3189512 | ID=Msa0664150-mRNA-1:cds;Parent=Msa0664150-mRNA-1 |
| chr4_4 | CDS | 3189264 | 3189337 | 3189264 | ID=Msa0664150-mRNA-1:cds;Parent=Msa0664150-mRNA-1 |
| chr4_4 | CDS | 3188992 | 3189032 | 3188992 | ID=Msa0664150-mRNA-1:cds;Parent=Msa0664150-mRNA-1 |
| chr4_4 | CDS | 3186952 | 3187068 | 3186952 | ID=Msa0664150-mRNA-1:cds;Parent=Msa0664150-mRNA-1 |
| chr4_4 | CDS | 3186917 | 3186928 | 3186917 | ID=Msa0664150-mRNA-1:cds;Parent=Msa0664150-mRNA-1 |
| chr4_4 | CDS | 3184209 | 3184295 | 3184209 | ID=Msa0664150-mRNA-1:cds;Parent=Msa0664150-mRNA-1 |
| chr4_4 | CDS | 3183833 | 3184176 | 3183833 | ID=Msa0664150-mRNA-1:cds;Parent=Msa0664150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
