Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0176220 | sp|Q2RAK2|KPYC1_ORYSJ | 84.061 | 527 | 83 | 1 | 1 | 526 | 1 | 527 | 0.0 | 933 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0176220 | A0A072VP40 | 99.430 | 526 | 3 | 0 | 1 | 526 | 1 | 526 | 0.0 | 1080 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026250 | Msa0176220 | 0.817513 | 3.171007e-52 | -8.615850e-47 |
| Msa0035740 | Msa0176220 | 0.892790 | 1.146861e-74 | -8.615850e-47 |
| Msa0176220 | Msa0219280 | 0.801435 | 9.014590e-49 | -8.615850e-47 |
| Msa0176220 | Msa0227790 | 0.817742 | 2.816006e-52 | -8.615850e-47 |
| Msa0176220 | Msa0384590 | 0.819690 | 1.017444e-52 | -8.615850e-47 |
| Msa0176220 | Msa0434660 | 0.815082 | 1.109121e-51 | -8.615850e-47 |
| Msa0176220 | Msa0522540 | 0.820749 | 5.820173e-53 | -8.615850e-47 |
| Msa0176220 | Msa0541880 | 0.805391 | 1.365604e-49 | -8.615850e-47 |
| Msa0176220 | Msa0577860 | -0.800280 | 1.551765e-48 | -8.615850e-47 |
| Msa0176220 | Msa0958830 | 0.848268 | 6.829845e-60 | -8.615850e-47 |
| Msa0176220 | Msa0970040 | 0.835368 | 1.748198e-56 | -8.615850e-47 |
| Msa0176220 | Msa1026970 | 0.814652 | 1.381456e-51 | -8.615850e-47 |
| Msa0176220 | Msa1038860 | 0.814188 | 1.749157e-51 | -8.615850e-47 |
| Msa0176220 | Msa1111900 | 0.817024 | 4.087076e-52 | -8.615850e-47 |
| Msa0176220 | Msa1154310 | 0.810656 | 1.034316e-50 | -8.615850e-47 |
| Msa0176220 | Msa1197720 | 0.815485 | 9.025625e-52 | -8.615850e-47 |
| Msa0176220 | Msa1205990 | 0.835552 | 1.570357e-56 | -8.615850e-47 |
| Msa0176220 | Msa1251410 | 0.832274 | 1.037752e-55 | -8.615850e-47 |
| Msa0176220 | Msa1352580 | 0.806476 | 8.076009e-50 | -8.615850e-47 |
| Msa0176220 | Msa1396110 | 0.892377 | 1.679299e-74 | -8.615850e-47 |
| Msa0176220 | Msa1434300 | 0.833750 | 4.456739e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0176220 | MtrunA17_Chr1g0197911 | 99.430 | 526 | 3 | 0 | 1 | 526 | 1 | 526 | 0.0 | 1080 |
| Msa0176220 | MtrunA17_Chr7g0265591 | 81.594 | 527 | 96 | 1 | 1 | 526 | 1 | 527 | 0.0 | 920 |
| Msa0176220 | MtrunA17_Chr1g0179541 | 80.718 | 529 | 83 | 3 | 1 | 526 | 1 | 513 | 0.0 | 889 |
| Msa0176220 | MtrunA17_Chr6g0448901 | 43.030 | 495 | 269 | 7 | 30 | 521 | 22 | 506 | 5.91e-132 | 393 |
| Msa0176220 | MtrunA17_Chr7g0263711 | 41.942 | 515 | 281 | 9 | 14 | 525 | 1 | 500 | 5.81e-129 | 385 |
| Msa0176220 | MtrunA17_Chr4g0043311 | 41.683 | 499 | 278 | 7 | 30 | 525 | 9 | 497 | 6.51e-128 | 382 |
| Msa0176220 | MtrunA17_Chr4g0043301 | 41.553 | 515 | 283 | 9 | 14 | 525 | 1 | 500 | 2.71e-125 | 375 |
| Msa0176220 | MtrunA17_Chr5g0400361 | 30.000 | 410 | 255 | 12 | 30 | 430 | 79 | 465 | 2.08e-47 | 173 |
| Msa0176220 | MtrunA17_Chr1g0206791 | 26.761 | 497 | 319 | 12 | 30 | 513 | 18 | 482 | 8.13e-47 | 170 |
| Msa0176220 | MtrunA17_Chr6g0463101 | 28.081 | 495 | 313 | 15 | 21 | 511 | 99 | 554 | 9.17e-46 | 169 |
| Msa0176220 | MtrunA17_Chr1g0188101 | 26.547 | 501 | 310 | 12 | 30 | 508 | 91 | 555 | 1.25e-44 | 166 |
| Msa0176220 | MtrunA17_Chr1g0202291 | 27.778 | 486 | 309 | 15 | 30 | 511 | 105 | 552 | 2.96e-44 | 164 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0176220 | AT3G52990.1 | 81.594 | 527 | 96 | 1 | 1 | 526 | 1 | 527 | 0.0 | 913 |
| Msa0176220 | AT2G36580.1 | 80.645 | 527 | 101 | 1 | 1 | 526 | 1 | 527 | 0.0 | 898 |
| Msa0176220 | AT3G52990.2 | 82.278 | 474 | 83 | 1 | 54 | 526 | 1 | 474 | 0.0 | 832 |
| Msa0176220 | AT5G63680.3 | 43.030 | 495 | 269 | 7 | 30 | 521 | 22 | 506 | 5.81e-128 | 383 |
| Msa0176220 | AT5G63680.1 | 43.030 | 495 | 269 | 7 | 30 | 521 | 22 | 506 | 5.81e-128 | 383 |
| Msa0176220 | AT5G63680.2 | 43.030 | 495 | 269 | 7 | 30 | 521 | 22 | 506 | 5.81e-128 | 383 |
| Msa0176220 | AT5G08570.1 | 43.232 | 495 | 268 | 9 | 30 | 521 | 22 | 506 | 5.05e-127 | 381 |
| Msa0176220 | AT5G08570.2 | 43.232 | 495 | 268 | 9 | 30 | 521 | 22 | 506 | 5.05e-127 | 381 |
| Msa0176220 | AT5G08570.3 | 43.232 | 495 | 268 | 9 | 30 | 521 | 22 | 506 | 5.05e-127 | 381 |
| Msa0176220 | AT5G56350.1 | 42.742 | 496 | 271 | 8 | 30 | 522 | 10 | 495 | 1.48e-126 | 379 |
| Msa0176220 | AT4G26390.1 | 41.129 | 496 | 279 | 7 | 30 | 522 | 9 | 494 | 6.49e-122 | 367 |
| Msa0176220 | AT3G04050.1 | 40.637 | 502 | 283 | 8 | 30 | 525 | 18 | 510 | 6.61e-120 | 362 |
| Msa0176220 | AT3G55650.1 | 41.036 | 502 | 281 | 7 | 30 | 525 | 18 | 510 | 2.96e-117 | 355 |
| Msa0176220 | AT3G25960.1 | 40.882 | 499 | 273 | 8 | 30 | 525 | 18 | 497 | 9.48e-116 | 351 |
| Msa0176220 | AT3G55810.1 | 38.247 | 502 | 277 | 8 | 30 | 525 | 18 | 492 | 3.42e-103 | 319 |
| Msa0176220 | AT1G32440.1 | 30.569 | 422 | 266 | 11 | 30 | 448 | 101 | 498 | 2.58e-48 | 176 |
| Msa0176220 | AT5G52920.1 | 29.227 | 414 | 272 | 12 | 21 | 431 | 104 | 499 | 5.46e-43 | 161 |
| Msa0176220 | AT3G22960.1 | 25.852 | 499 | 314 | 13 | 30 | 508 | 119 | 581 | 2.28e-40 | 154 |
Find 131 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAGACATTGGAAAATTTA+AGG | 0.150763 | 1_4:-62482643 | Msa0176220:CDS |
| CATTGTCTCTCGTGGAAATT+TGG | 0.157630 | 1_4:-62480588 | Msa0176220:CDS |
| CTGCTTGAGGTCTTCAAATT+TGG | 0.167564 | 1_4:+62480825 | None:intergenic |
| GACATTCACCGGTGCATTTC+AGG | 0.196130 | 1_4:-62479122 | Msa0176220:CDS |
| CTGACGAGTCACCAACTTTC+TGG | 0.209286 | 1_4:+62478765 | None:intergenic |
| CTTGGGGCAGAGACCCTTAC+TGG | 0.238060 | 1_4:-62479992 | Msa0176220:CDS |
| AATGTCTCTTGGTGGTATTC+TGG | 0.238537 | 1_4:+62482656 | None:intergenic |
| ATCGGTAAATATCTGTTTAC+AGG | 0.257297 | 1_4:-62482114 | Msa0176220:CDS |
| GAAAGGCCGCTAAAATTTAC+TGG | 0.264525 | 1_4:+62482291 | None:intergenic |
| TGCTTCTTGAGGAACCTATT+AGG | 0.292663 | 1_4:-62484158 | Msa0176220:CDS |
| TTAGACCATGGCAAGGCTTT+TGG | 0.295423 | 1_4:-62478821 | Msa0176220:CDS |
| TTATTCACGACTTGTAATTC+TGG | 0.303358 | 1_4:+62482399 | None:intergenic |
| CATCACTGGTTAATTTGTTT+AGG | 0.303785 | 1_4:-62484231 | Msa0176220:five_prime_UTR |
| GTAGCTTCTTTGTTCTGATC+TGG | 0.328901 | 1_4:+62482327 | None:intergenic |
| CTGGTTAATTTGTTTAGGTT+TGG | 0.330385 | 1_4:-62484226 | Msa0176220:five_prime_UTR |
| ATTGTCTCTCGTGGAAATTT+GGG | 0.332252 | 1_4:-62480587 | Msa0176220:CDS |
| GTGTCTGCTTCAAGGGTAAT+TGG | 0.332260 | 1_4:+62482366 | None:intergenic |
| AGAGACATTGGAAAATTTAA+GGG | 0.372740 | 1_4:-62482642 | Msa0176220:CDS |
| AGGATGGAAGCCATCCTAAT+AGG | 0.392259 | 1_4:+62484144 | None:intergenic |
| ATCATCTGCTTCACCTCATC+TGG | 0.394382 | 1_4:-62479441 | Msa0176220:CDS |
| GTGCAGGCCGAATCGAATAC+TGG | 0.397044 | 1_4:-62478872 | Msa0176220:intron |
| TATTACATCACTCTAATTAG+TGG | 0.397173 | 1_4:+62478688 | None:intergenic |
| ACCACACGTGTGACAACAAC+GGG | 0.403478 | 1_4:+62480316 | None:intergenic |
| GATGGAGATACTGACAGGTT+TGG | 0.408779 | 1_4:+62484113 | None:intergenic |
| TCGAGCAGCCGTCAAGGTTA+AGG | 0.409040 | 1_4:-62479472 | Msa0176220:CDS |
| ATTGATTCCATGTGGCTCAT+AGG | 0.420729 | 1_4:+62479612 | None:intergenic |
| AAGTAGATACCGACCTTCTC+AGG | 0.423206 | 1_4:+62480551 | None:intergenic |
| GCAGTGATGCAATTCTCCTT+GGG | 0.424846 | 1_4:-62480009 | Msa0176220:CDS |
| GTCCAGCCCTTTGCTTCTTG+AGG | 0.431172 | 1_4:-62484169 | Msa0176220:CDS |
| TTGCACGGTTTGACTTCTCA+TGG | 0.446494 | 1_4:-62482685 | Msa0176220:CDS |
| CAAGTGATGTGTCTGCTTCA+AGG | 0.449834 | 1_4:+62482358 | None:intergenic |
| GGCAGTGATGCAATTCTCCT+TGG | 0.450255 | 1_4:-62480010 | Msa0176220:CDS |
| ACTGTAGAAATGGTTTCTAC+AGG | 0.450667 | 1_4:+62479962 | None:intergenic |
| AGTTGATTTGTCTTCAATTG+AGG | 0.452233 | 1_4:+62479151 | None:intergenic |
| TGCCTTGATGCAGGAATGTC+TGG | 0.452622 | 1_4:-62483221 | Msa0176220:intron |
| TAAGAAGACTGTCAAATATG+TGG | 0.458797 | 1_4:-62479640 | Msa0176220:CDS |
| GGCGAACATCTTCAGCGTGC+CGG | 0.459359 | 1_4:+62481043 | None:intergenic |
| AATAGTATCACCCTTCTTCA+CGG | 0.459621 | 1_4:+62482140 | None:intergenic |
| ATCAAATGAATCAATCTTGA+AGG | 0.460016 | 1_4:-62478849 | Msa0176220:CDS |
| GATTATGCAGGCCGTGAAGA+AGG | 0.462451 | 1_4:-62482151 | Msa0176220:intron |
| ATTTCTTTCTCCTTCATCAC+TGG | 0.462864 | 1_4:-62484245 | Msa0176220:five_prime_UTR |
| CGATGTTGCCAATGCAGTAT+TGG | 0.462920 | 1_4:-62480248 | Msa0176220:CDS |
| GCGAACATCTTCAGCGTGCC+GGG | 0.463044 | 1_4:+62481044 | None:intergenic |
| GTAGAAACCATTTCTACAGT+TGG | 0.470386 | 1_4:-62479959 | Msa0176220:CDS |
| TCTTCCTACTCTTACTGATA+AGG | 0.470694 | 1_4:-62481517 | Msa0176220:CDS |
| TGTCTGCTTCAAGGGTAATT+GGG | 0.470997 | 1_4:+62482367 | None:intergenic |
| TGCACGGTTTGACTTCTCAT+GGG | 0.475448 | 1_4:-62482684 | Msa0176220:CDS |
| ATTTGATCCAGTATTCGATT+CGG | 0.478935 | 1_4:+62478865 | None:intergenic |
| AACAGAAGCCTTAACCTTGA+CGG | 0.484642 | 1_4:+62479464 | None:intergenic |
| AACAAATTAACCAGTGATGA+AGG | 0.487622 | 1_4:+62484235 | None:intergenic |
| AAATTTGGAGATATATTCAC+GGG | 0.502345 | 1_4:+62480840 | None:intergenic |
| AAGTGATGTGTCTGCTTCAA+GGG | 0.505911 | 1_4:+62482359 | None:intergenic |
| TCACCGGTGCATTTCAGGCT+CGG | 0.507269 | 1_4:-62479117 | Msa0176220:CDS |
| TGTCGAGGATCCGCCAGCAT+AGG | 0.508898 | 1_4:+62479067 | None:intergenic |
| GAAGTGAAACAACTTCTGTA+TGG | 0.510806 | 1_4:-62482092 | Msa0176220:CDS |
| ACATTCCTGCATCAAGGCAT+CGG | 0.512212 | 1_4:+62483225 | None:intergenic |
| TTCCTCAAGAAGCAAAGGGC+TGG | 0.521311 | 1_4:+62484167 | None:intergenic |
| GTCGAGGATCCGCCAGCATA+GGG | 0.522821 | 1_4:+62479068 | None:intergenic |
| CATTCCTGCATCAAGGCATC+GGG | 0.523891 | 1_4:+62483226 | None:intergenic |
| ATTACCCGATGCCTTGATGC+AGG | 0.526566 | 1_4:-62483230 | Msa0176220:CDS |
| TCTTACTGATAAGGATAAAG+AGG | 0.526803 | 1_4:-62481508 | Msa0176220:intron |
| AAGAAGACTGTCAAATATGT+GGG | 0.528997 | 1_4:-62479639 | Msa0176220:CDS |
| CTACAGGGTATAATCCAGTA+AGG | 0.529033 | 1_4:+62479978 | None:intergenic |
| CTGCTTCACCTCATCTGGAA+GGG | 0.535094 | 1_4:-62479436 | Msa0176220:CDS |
| ATTTATAAGTGTAACATGGC+GGG | 0.535820 | 1_4:-62480343 | Msa0176220:CDS |
| CAAATTTGGAGATATATTCA+CGG | 0.536091 | 1_4:+62480839 | None:intergenic |
| TAGGTTCCTCAAGAAGCAAA+GGG | 0.537810 | 1_4:+62484163 | None:intergenic |
| CCTCATCTGGAAGGGCTGCA+AGG | 0.541301 | 1_4:-62479428 | Msa0176220:intron |
| ATTACCATCCAATACTGCAT+TGG | 0.545679 | 1_4:+62480240 | None:intergenic |
| TGACAGGTTTGGATGGCTCT+AGG | 0.546806 | 1_4:+62484124 | None:intergenic |
| TCTTGAGGAACCTATTAGGA+TGG | 0.548539 | 1_4:-62484154 | Msa0176220:CDS |
| ATAGGTTCCTCAAGAAGCAA+AGG | 0.550497 | 1_4:+62484162 | None:intergenic |
| AGAATACCACCAAGAGACAT+TGG | 0.551827 | 1_4:-62482654 | Msa0176220:CDS |
| TACCAGACATTCCTGCATCA+AGG | 0.552457 | 1_4:+62483219 | None:intergenic |
| AGGTTTGGATGGCTCTAGGA+TGG | 0.555270 | 1_4:+62484128 | None:intergenic |
| TTGAAGGTTGCTTTAGACCA+TGG | 0.555702 | 1_4:-62478833 | Msa0176220:CDS |
| TGCAAAGATCGAAAATGTAG+AGG | 0.564673 | 1_4:-62480791 | Msa0176220:intron |
| ATCATTCTTACAGGGTGTCG+AGG | 0.564881 | 1_4:+62479052 | None:intergenic |
| TCTGCTTCACCTCATCTGGA+AGG | 0.565181 | 1_4:-62479437 | Msa0176220:CDS |
| ACAGATATCACAGGCATGGT+TGG | 0.565703 | 1_4:+62479181 | None:intergenic |
| CTGTAGAAATGGTTTCTACA+GGG | 0.567154 | 1_4:+62479963 | None:intergenic |
| ATTATGCAGGCCGTGAAGAA+GGG | 0.567518 | 1_4:-62482150 | Msa0176220:intron |
| ATACAGGTCAGCGAGGTGAA+TGG | 0.567535 | 1_4:-62481624 | Msa0176220:intron |
| GATGGTATCATTGTCTCTCG+TGG | 0.568066 | 1_4:-62480596 | Msa0176220:CDS |
| AACTTAGGTAATACGCACAT+GGG | 0.571273 | 1_4:-62481103 | Msa0176220:intron |
| CAACTCCGATGGACATTCAC+CGG | 0.575309 | 1_4:-62479133 | Msa0176220:CDS |
| GTTGTTGTTTGCCAGAAAGT+TGG | 0.576382 | 1_4:-62478776 | Msa0176220:CDS |
| GATAGATCTCCCACCTGAGA+AGG | 0.576840 | 1_4:-62480564 | Msa0176220:intron |
| GAGATACTGACAGGTTTGGA+TGG | 0.577564 | 1_4:+62484117 | None:intergenic |
| TGAAGACAAATCAACTCCGA+TGG | 0.584693 | 1_4:-62479144 | Msa0176220:CDS |
| CCTTGCAGCCCTTCCAGATG+AGG | 0.586363 | 1_4:+62479428 | None:intergenic |
| TTATCCTTATCAGTAAGAGT+AGG | 0.591542 | 1_4:+62481513 | None:intergenic |
| TGATGCCAAAAGCCTTGCCA+TGG | 0.594137 | 1_4:+62478816 | None:intergenic |
| CTTACCATATGCCAGTTGCA+CGG | 0.596871 | 1_4:-62482700 | Msa0176220:intron |
| CAATACTGCATTGGCAACAT+CGG | 0.597566 | 1_4:+62480249 | None:intergenic |
| CGGCAGTCACTTATTGTGAG+AGG | 0.598163 | 1_4:-62479097 | Msa0176220:CDS |
| ACAGGTTCGAGCAGCCGTCA+AGG | 0.598249 | 1_4:-62479478 | Msa0176220:intron |
| CTTTCTGGCAAACAACAACT+CGG | 0.599279 | 1_4:+62478780 | None:intergenic |
| GCACGGTTTGACTTCTCATG+GGG | 0.608536 | 1_4:-62482683 | Msa0176220:CDS |
| AAGGTAGACTGACCTTTGAA+AGG | 0.609390 | 1_4:+62482274 | None:intergenic |
| GAGATATTGAGAGAAGCAGA+TGG | 0.612258 | 1_4:-62480614 | Msa0176220:CDS |
| TTGTCTCTCGTGGAAATTTG+GGG | 0.612945 | 1_4:-62480586 | Msa0176220:CDS |
| ATGCACCGGTGAATGTCCAT+CGG | 0.620402 | 1_4:+62479128 | None:intergenic |
| CTGCCGAGCCTGAAATGCAC+CGG | 0.620410 | 1_4:+62479114 | None:intergenic |
| GGTTGCTTTAGACCATGGCA+AGG | 0.624133 | 1_4:-62478828 | Msa0176220:CDS |
| TAGATACCGACCTTCTCAGG+TGG | 0.626269 | 1_4:+62480554 | None:intergenic |
| ACTTAGGTAATACGCACATG+GGG | 0.626722 | 1_4:-62481102 | Msa0176220:intron |
| GCCCGTTGTTGTCACACGTG+TGG | 0.628308 | 1_4:-62480317 | Msa0176220:CDS |
| TAACTTAGGTAATACGCACA+TGG | 0.628609 | 1_4:-62481104 | Msa0176220:intron |
| GACGACAGATATCACAGGCA+TGG | 0.630625 | 1_4:+62479177 | None:intergenic |
| CAGGTTATGCTAGATACTGT+AGG | 0.633111 | 1_4:-62482423 | Msa0176220:CDS |
| CAGTAAGGGTCTCTGCCCCA+AGG | 0.637264 | 1_4:+62479993 | None:intergenic |
| TACAGGGTATAATCCAGTAA+GGG | 0.637369 | 1_4:+62479979 | None:intergenic |
| GACCACACGTGTGACAACAA+CGG | 0.637756 | 1_4:+62480315 | None:intergenic |
| TCGGTTGCTTCAGCACGAGT+AGG | 0.643981 | 1_4:+62480268 | None:intergenic |
| AACAACTTCTGTATGGCTAG+AGG | 0.646199 | 1_4:-62482085 | Msa0176220:intron |
| TAATGAGAAATGTACTGCAG+AGG | 0.647825 | 1_4:+62479584 | None:intergenic |
| AGATACCGACCTTCTCAGGT+GGG | 0.649922 | 1_4:+62480555 | None:intergenic |
| CAAACAACAACTCGGTCATG+TGG | 0.652383 | 1_4:+62478788 | None:intergenic |
| CAGTGATGCAATTCTCCTTG+GGG | 0.653565 | 1_4:-62480008 | Msa0176220:CDS |
| ACTTCCTCTCATTATACACC+CGG | 0.654885 | 1_4:-62481062 | Msa0176220:CDS |
| GGGAGAGCCTATGAGCCACA+TGG | 0.657231 | 1_4:-62479619 | Msa0176220:CDS |
| TGCTATTTATAAGTGTAACA+TGG | 0.661564 | 1_4:-62480347 | Msa0176220:CDS |
| CGTGCCGGGTGTATAATGAG+AGG | 0.669231 | 1_4:+62481058 | None:intergenic |
| GTTGCCAATGCAGTATTGGA+TGG | 0.678151 | 1_4:-62480244 | Msa0176220:intron |
| TATTTATAAGTGTAACATGG+CGG | 0.681522 | 1_4:-62480344 | Msa0176220:CDS |
| CTTAGGTAATACGCACATGG+GGG | 0.693230 | 1_4:-62481101 | Msa0176220:intron |
| TTAGGTAATACGCACATGGG+GGG | 0.704480 | 1_4:-62481100 | Msa0176220:intron |
| GGAATGACGACAGATATCAC+AGG | 0.710120 | 1_4:+62479172 | None:intergenic |
| AGGAAGCTATTGATTCCATG+TGG | 0.726968 | 1_4:+62479604 | None:intergenic |
| TTTCACAATACAGGTCAGCG+AGG | 0.765838 | 1_4:-62481631 | Msa0176220:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTTGAAATAAATAAATAAA+TGG | + | chr1_4:62478774-62478793 | None:intergenic | 10.0% |
| !!! | GAAAATAGATTTTTTTTTTT+TGG | - | chr1_4:62481535-62481554 | Msa0176220:CDS | 10.0% |
| !! | AAAAATACAAATAAACAAAA+TGG | + | chr1_4:62482364-62482383 | None:intergenic | 10.0% |
| !!! | TTTATTTTTTTATGTTATGT+AGG | - | chr1_4:62483634-62483653 | Msa0176220:intron | 10.0% |
| !!! | ATATATATAAGTTGAATAAG+AGG | - | chr1_4:62479876-62479895 | Msa0176220:intron | 15.0% |
| !! | TAATTCAGTTATAACTTATA+AGG | - | chr1_4:62480911-62480930 | Msa0176220:intron | 15.0% |
| !! | AATTCAGTTATAACTTATAA+GGG | - | chr1_4:62480912-62480931 | Msa0176220:intron | 15.0% |
| !! | ATATTAATAAAGAAGTCTAA+TGG | + | chr1_4:62480981-62481000 | None:intergenic | 15.0% |
| !! | ATATTTGTAGTTAGATTTAT+AGG | - | chr1_4:62481107-62481126 | Msa0176220:intron | 15.0% |
| !! | AGTATGCAATAATAATAAAA+TGG | + | chr1_4:62481694-62481713 | None:intergenic | 15.0% |
| !!! | AATTTTTTGTCTTTTATATC+AGG | - | chr1_4:62482825-62482844 | Msa0176220:intron | 15.0% |
| !!! | ATGATTTTATCATTACATTA+TGG | - | chr1_4:62483105-62483124 | Msa0176220:intron | 15.0% |
| !!! | TGTGTTTGATGTTTTTTTTT+TGG | - | chr1_4:62478796-62478815 | Msa0176220:CDS | 20.0% |
| !!! | TTTGATGTTTTTTTTTTGGT+TGG | - | chr1_4:62478800-62478819 | Msa0176220:CDS | 20.0% |
| !!! | CTTTTCTTGATGTAAATAAT+TGG | - | chr1_4:62478833-62478852 | Msa0176220:CDS | 20.0% |
| !! | TGTAAATAATTGGTATTATG+AGG | - | chr1_4:62478843-62478862 | Msa0176220:CDS | 20.0% |
| !!! | AATAAATTGAAATCAGCTTT+TGG | - | chr1_4:62479216-62479235 | Msa0176220:intron | 20.0% |
| !! | ATGTAAGTAATTTACTCTTT+AGG | - | chr1_4:62479335-62479354 | Msa0176220:intron | 20.0% |
| !! | AACTATTATTCTTTGTGTTA+TGG | - | chr1_4:62479399-62479418 | Msa0176220:intron | 20.0% |
| !!! | GATTTAAGATACTAAAAGAA+AGG | - | chr1_4:62479436-62479455 | Msa0176220:CDS | 20.0% |
| !!! | CAATGAATGAAATGTTTTAA+TGG | + | chr1_4:62479668-62479687 | None:intergenic | 20.0% |
| !!! | TTTGTTCATAAGTTGATTAT+AGG | - | chr1_4:62479697-62479716 | Msa0176220:intron | 20.0% |
| !! | TCACAAGTAACAAAATTTAT+TGG | - | chr1_4:62479941-62479960 | Msa0176220:intron | 20.0% |
| !!! | ATTTTCTCCAAGTTATTTTT+TGG | - | chr1_4:62481055-62481074 | Msa0176220:CDS | 20.0% |
| !! | ACAAATATAAGAAGGAAATT+TGG | + | chr1_4:62481095-62481114 | None:intergenic | 20.0% |
| !! | ATCTAACTACAAATATAAGA+AGG | + | chr1_4:62481103-62481122 | None:intergenic | 20.0% |
| !! | TAACAAATGTAAAACTGATT+TGG | - | chr1_4:62481633-62481652 | Msa0176220:intron | 20.0% |
| !!! | TTCTTCTCTAAAATTCATAT+AGG | - | chr1_4:62482202-62482221 | Msa0176220:intron | 20.0% |
| !!! | TCTTCTCTAAAATTCATATA+GGG | - | chr1_4:62482203-62482222 | Msa0176220:intron | 20.0% |
| !!! | ATTTGTATTTTTTAGTGTCA+CGG | - | chr1_4:62482372-62482391 | Msa0176220:CDS | 20.0% |
| !! | AAATTCATACATACATATTC+AGG | + | chr1_4:62482464-62482483 | None:intergenic | 20.0% |
| !!! | TGAGAAGTCTTTTTAATAAA+GGG | + | chr1_4:62483468-62483487 | None:intergenic | 20.0% |
| !!! | ATGAGAAGTCTTTTTAATAA+AGG | + | chr1_4:62483469-62483488 | None:intergenic | 20.0% |
| !! | AAATACTGAAAAAAAGAAGA+AGG | + | chr1_4:62483527-62483546 | None:intergenic | 20.0% |
| !!! | TATTTATTTAGTTCCACATT+CGG | - | chr1_4:62483542-62483561 | Msa0176220:intron | 20.0% |
| !! | TACATTTAATCATTCTTACA+GGG | + | chr1_4:62483815-62483834 | None:intergenic | 20.0% |
| !! | TTACATTTAATCATTCTTAC+AGG | + | chr1_4:62483816-62483835 | None:intergenic | 20.0% |
| !!! | TCATATAGTGTTGTTATATA+TGG | - | chr1_4:62483838-62483857 | Msa0176220:intron | 20.0% |
| !!! | CATATAGTGTTGTTATATAT+GGG | - | chr1_4:62483839-62483858 | Msa0176220:intron | 20.0% |
| !!! | ATATAGTGTTGTTATATATG+GGG | - | chr1_4:62483840-62483859 | Msa0176220:intron | 20.0% |
| ! | AATAAATAAATGGAGAGAGA+TGG | + | chr1_4:62478764-62478783 | None:intergenic | 25.0% |
| ! | GTCTATTTATGATTAGAGAT+GGG | - | chr1_4:62479308-62479327 | Msa0176220:intron | 25.0% |
| ! | TCTATTTATGATTAGAGATG+GGG | - | chr1_4:62479309-62479328 | Msa0176220:intron | 25.0% |
| ! | CAAAACAAATGTGAAAAACA+AGG | + | chr1_4:62479367-62479386 | None:intergenic | 25.0% |
| !!! | CTTGTTTTTCACATTTGTTT+TGG | - | chr1_4:62479365-62479384 | Msa0176220:intron | 25.0% |
| ! | TGTGTTATGGAAATTAAGTA+TGG | - | chr1_4:62479412-62479431 | Msa0176220:intron | 25.0% |
| ! | AAAGAGACAGTTAAAAATGA+AGG | + | chr1_4:62479756-62479775 | None:intergenic | 25.0% |
| ! | AAGAGGATAAATGATATTAC+AGG | - | chr1_4:62479893-62479912 | Msa0176220:intron | 25.0% |
| ! | TGTAAATAACCTTAGCTAAA+TGG | - | chr1_4:62479984-62480003 | Msa0176220:CDS | 25.0% |
| ! | TCTTCTGTTATAATTTGGAT+TGG | - | chr1_4:62480080-62480099 | Msa0176220:intron | 25.0% |
| !! | TTAAATTTTCCAATGTCTCT+TGG | + | chr1_4:62480214-62480233 | None:intergenic | 25.0% |
| ! | AAGAGACATTGGAAAATTTA+AGG | - | chr1_4:62480213-62480232 | Msa0176220:intron | 25.0% |
| ! | AGAGACATTGGAAAATTTAA+GGG | - | chr1_4:62480214-62480233 | Msa0176220:intron | 25.0% |
| ! | GACATACTATTAAATGATTG+TGG | - | chr1_4:62480311-62480330 | Msa0176220:CDS | 25.0% |
| !!! | TGATTGTGGTTTTAATACAT+TGG | - | chr1_4:62480325-62480344 | Msa0176220:CDS | 25.0% |
| !! | GTAACAATATACATGCATTT+TGG | - | chr1_4:62480402-62480421 | Msa0176220:intron | 25.0% |
| !! | CTATTACCAGTAAATTTTAG+CGG | - | chr1_4:62480559-62480578 | Msa0176220:intron | 25.0% |
| !!! | AAGGGTGATACTATTTTTAT+CGG | - | chr1_4:62480724-62480743 | Msa0176220:intron | 25.0% |
| ! | ATAGGATCCAAAAAATAACT+TGG | + | chr1_4:62481065-62481084 | None:intergenic | 25.0% |
| ! | AAAATGACTTATCTTTCTGT+TGG | - | chr1_4:62481500-62481519 | Msa0176220:intron | 25.0% |
| ! | GTACACTTACATTTAATCTT+TGG | + | chr1_4:62481566-62481585 | None:intergenic | 25.0% |
| ! | TTAGTGAGTAAAATGTCAAA+AGG | + | chr1_4:62481735-62481754 | None:intergenic | 25.0% |
| !! | GCATTGTTTATGTTTTCTAA+TGG | + | chr1_4:62481976-62481995 | None:intergenic | 25.0% |
| ! | AAATTTGGAGATATATTCAC+GGG | + | chr1_4:62482019-62482038 | None:intergenic | 25.0% |
| ! | CAAATTTGGAGATATATTCA+CGG | + | chr1_4:62482020-62482039 | None:intergenic | 25.0% |
| ! | TTTATGATTGTGCTTAATTG+TGG | - | chr1_4:62482164-62482183 | Msa0176220:intron | 25.0% |
| !! | AATAAACAAAATGGAAGCAT+AGG | + | chr1_4:62482355-62482374 | None:intergenic | 25.0% |
| ! | TATGTATGTATGAATTTGAC+AGG | - | chr1_4:62482467-62482486 | Msa0176220:intron | 25.0% |
| !! | ACTTATAAATAGCAGCTTTT+TGG | + | chr1_4:62482503-62482522 | None:intergenic | 25.0% |
| !! | TGCTATTTATAAGTGTAACA+TGG | - | chr1_4:62482509-62482528 | Msa0176220:intron | 25.0% |
| ! | TATTTATAAGTGTAACATGG+CGG | - | chr1_4:62482512-62482531 | Msa0176220:intron | 25.0% |
| ! | ACAAAAAAGAACTTAGATGA+GGG | + | chr1_4:62482649-62482668 | None:intergenic | 25.0% |
| !! | AATTTTTCCAACTGTAGAAA+TGG | + | chr1_4:62482907-62482926 | None:intergenic | 25.0% |
| !!! | TTTTAATTGCGAAAAGTAGT+AGG | + | chr1_4:62482971-62482990 | None:intergenic | 25.0% |
| !!! | TAATTTGTTCAGATATTCTG+TGG | - | chr1_4:62483059-62483078 | Msa0176220:intron | 25.0% |
| ! | AACGATATTAAAACCTCAAT+CGG | - | chr1_4:62483877-62483896 | Msa0176220:intron | 25.0% |
| ! | ATCAAATGAATCAATCTTGA+AGG | - | chr1_4:62484007-62484026 | Msa0176220:intron | 25.0% |
| ! | TATTACATCACTCTAATTAG+TGG | + | chr1_4:62484171-62484190 | None:intergenic | 25.0% |
| !!! | TAAGTTTTTGAGTGACAAAA+TGG | - | chr1_4:62484203-62484222 | Msa0176220:five_prime_UTR | 25.0% |
| !!! | ACTATAGTTTTGAACTAGAA+CGG | - | chr1_4:62484262-62484281 | Msa0176220:five_prime_UTR | 25.0% |
| AACAAATTAACCAGTGATGA+AGG | + | chr1_4:62478624-62478643 | None:intergenic | 30.0% | |
| !! | CATCACTGGTTAATTTGTTT+AGG | - | chr1_4:62478625-62478644 | Msa0176220:three_prime_UTR | 30.0% |
| !! | CTGGTTAATTTGTTTAGGTT+TGG | - | chr1_4:62478630-62478649 | Msa0176220:three_prime_UTR | 30.0% |
| TTCAACTTGATCTACCATAA+TGG | + | chr1_4:62478909-62478928 | None:intergenic | 30.0% | |
| !!! | AAATGCTAGTGTAGTTTTGT+TGG | - | chr1_4:62478929-62478948 | Msa0176220:intron | 30.0% |
| TTCAAGATCAATCTATGTCA+AGG | + | chr1_4:62479022-62479041 | None:intergenic | 30.0% | |
| AGAATGACAATGCTTATGTT+TGG | + | chr1_4:62479158-62479177 | None:intergenic | 30.0% | |
| CCAAATAATAATGCAACAAC+TGG | + | chr1_4:62479246-62479265 | None:intergenic | 30.0% | |
| CCAGTTGTTGCATTATTATT+TGG | - | chr1_4:62479243-62479262 | Msa0176220:intron | 30.0% | |
| CGTCTATTTATGATTAGAGA+TGG | - | chr1_4:62479307-62479326 | Msa0176220:intron | 30.0% | |
| CTATTTATGATTAGAGATGG+GGG | - | chr1_4:62479310-62479329 | Msa0176220:intron | 30.0% | |
| ! | CCTATAATTTTTGTCATAGC+TGG | + | chr1_4:62479572-62479591 | None:intergenic | 30.0% |
| CCAGCTATGACAAAAATTAT+AGG | - | chr1_4:62479569-62479588 | Msa0176220:intron | 30.0% | |
| ACAAAAATTATAGGCACACT+TGG | - | chr1_4:62479578-62479597 | Msa0176220:intron | 30.0% | |
| ATAACCTTAGCTAAATGGAA+TGG | - | chr1_4:62479989-62480008 | Msa0176220:CDS | 30.0% | |
| GCTGTTCTTCTGTTATAATT+TGG | - | chr1_4:62480075-62480094 | Msa0176220:intron | 30.0% | |
| TGCACGTATGGAAAATAAAT+AGG | + | chr1_4:62480358-62480377 | None:intergenic | 30.0% | |
| !!! | ATGCATTTTGGTTCAATTAC+AGG | - | chr1_4:62480414-62480433 | Msa0176220:intron | 30.0% |
| TTATTCACGACTTGTAATTC+TGG | + | chr1_4:62480460-62480479 | None:intergenic | 30.0% | |
| TAAACATGTGATCCAACAAA+TGG | + | chr1_4:62480611-62480630 | None:intergenic | 30.0% | |
| ! | CATGGCTAATATGAAAGTAT+TGG | + | chr1_4:62480638-62480657 | None:intergenic | 30.0% |
| CATTGTAGTACACATTATCA+TGG | + | chr1_4:62480656-62480675 | None:intergenic | 30.0% | |
| GTGATTATCTCCTTTAACTA+AGG | - | chr1_4:62480675-62480694 | Msa0176220:intron | 30.0% | |
| ATCATGGATACCTTAGTTAA+AGG | + | chr1_4:62480688-62480707 | None:intergenic | 30.0% | |
| ATCGGTAAATATCTGTTTAC+AGG | - | chr1_4:62480742-62480761 | Msa0176220:intron | 30.0% | |
| CAGACATAGTTCAATCTTTA+AGG | - | chr1_4:62480799-62480818 | Msa0176220:CDS | 30.0% | |
| GTTATAACTGAATTACCCTA+AGG | + | chr1_4:62480906-62480925 | None:intergenic | 30.0% | |
| CTTGTTAAGTAGAAAGACTA+AGG | + | chr1_4:62481011-62481030 | None:intergenic | 30.0% | |
| AGGAAATTTGGTAGACTTAT+AGG | + | chr1_4:62481083-62481102 | None:intergenic | 30.0% | |
| !! | TAGGAAGCATTATATGAAAC+AGG | - | chr1_4:62481126-62481145 | Msa0176220:intron | 30.0% |
| ! | TTTTGTACTCTAAGTGTAAG+TGG | - | chr1_4:62481196-62481215 | Msa0176220:intron | 30.0% |
| TTATCCTTATCAGTAAGAGT+AGG | + | chr1_4:62481346-62481365 | None:intergenic | 30.0% | |
| TCTTACTGATAAGGATAAAG+AGG | - | chr1_4:62481348-62481367 | Msa0176220:intron | 30.0% | |
| GTAGTGAAATTGACATAATG+TGG | - | chr1_4:62481397-62481416 | Msa0176220:intron | 30.0% | |
| ! | TTTCTGTTGGTCTGTAAATA+TGG | - | chr1_4:62481513-62481532 | Msa0176220:CDS | 30.0% |
| AACTATTTACACAATTGACG+AGG | - | chr1_4:62481586-62481605 | Msa0176220:CDS | 30.0% | |
| TACCATTCGTGATTGTATAA+TGG | + | chr1_4:62481663-62481682 | None:intergenic | 30.0% | |
| ! | GACATTTTACTCACTAACTT+AGG | - | chr1_4:62481738-62481757 | Msa0176220:intron | 30.0% |
| AGCAGAAAGTCTATTGTTTA+GGG | + | chr1_4:62482107-62482126 | None:intergenic | 30.0% | |
| AAGCAGAAAGTCTATTGTTT+AGG | + | chr1_4:62482108-62482127 | None:intergenic | 30.0% | |
| ! | TAACATCAGATTTTTCTGAC+CGG | + | chr1_4:62482331-62482350 | None:intergenic | 30.0% |
| ATTTATAAGTGTAACATGGC+GGG | - | chr1_4:62482513-62482532 | Msa0176220:intron | 30.0% | |
| AAAAAAGAACTTAGATGAGG+GGG | + | chr1_4:62482647-62482666 | None:intergenic | 30.0% | |
| CAAAAAAGAACTTAGATGAG+GGG | + | chr1_4:62482648-62482667 | None:intergenic | 30.0% | |
| GACAAAAAAGAACTTAGATG+AGG | + | chr1_4:62482650-62482669 | None:intergenic | 30.0% | |
| TTTGTCGTATTTGAATAGTC+CGG | - | chr1_4:62482664-62482683 | Msa0176220:CDS | 30.0% | |
| !! | TAGTAGGAAGTGTTGTTTAA+AGG | + | chr1_4:62482955-62482974 | None:intergenic | 30.0% |
| GTATGACAAGAATACAAAAG+AGG | + | chr1_4:62483039-62483058 | None:intergenic | 30.0% | |
| TAAGAAGACTGTCAAATATG+TGG | - | chr1_4:62483216-62483235 | Msa0176220:intron | 30.0% | |
| AAGAAGACTGTCAAATATGT+GGG | - | chr1_4:62483217-62483236 | Msa0176220:intron | 30.0% | |
| TATTCTATTCACTTGCTCAA+AGG | - | chr1_4:62483299-62483318 | Msa0176220:CDS | 30.0% | |
| ATTCTATTCACTTGCTCAAA+GGG | - | chr1_4:62483300-62483319 | Msa0176220:intron | 30.0% | |
| ! | TTCTTTTTCCTGAAACATAC+AGG | - | chr1_4:62483360-62483379 | Msa0176220:intron | 30.0% |
| !! | AGTTGATTTGTCTTCAATTG+AGG | + | chr1_4:62483708-62483727 | None:intergenic | 30.0% |
| ACGATATTAAAACCTCAATC+GGG | - | chr1_4:62483878-62483897 | Msa0176220:intron | 30.0% | |
| ATTTGATCCAGTATTCGATT+CGG | + | chr1_4:62483994-62484013 | None:intergenic | 30.0% | |
| ATTTCTTTCTCCTTCATCAC+TGG | - | chr1_4:62478611-62478630 | Msa0176220:three_prime_UTR | 35.0% | |
| ! | TGTGTTGTTGTTGTCCATTA+TGG | - | chr1_4:62478892-62478911 | Msa0176220:intron | 35.0% |
| !!! | ACTTTTGAAGTGGTCCAAAT+TGG | + | chr1_4:62479131-62479150 | None:intergenic | 35.0% |
| !! | GTTTGGTTTCACTTTTGAAG+TGG | + | chr1_4:62479141-62479160 | None:intergenic | 35.0% |
| AAGTGCGGTAAATCTGATAA+AGG | + | chr1_4:62479727-62479746 | None:intergenic | 35.0% | |
| AAATGAAGGAGTGAAAAGTG+CGG | + | chr1_4:62479742-62479761 | None:intergenic | 35.0% | |
| ATTAAGACATGCAACTTGCA+AGG | + | chr1_4:62480107-62480126 | None:intergenic | 35.0% | |
| ! | AATTTTCCAATGTCTCTTGG+TGG | + | chr1_4:62480211-62480230 | None:intergenic | 35.0% |
| TACACTAATTACCCTTCAGA+AGG | + | chr1_4:62480385-62480404 | None:intergenic | 35.0% | |
| !! | AAATTTTAGCGGCCTTTCAA+AGG | - | chr1_4:62480570-62480589 | Msa0176220:CDS | 35.0% |
| ! | GTCTACCTTTTTCCATTTGT+TGG | - | chr1_4:62480596-62480615 | Msa0176220:CDS | 35.0% |
| GTGATCCAACAAATGGAAAA+AGG | + | chr1_4:62480604-62480623 | None:intergenic | 35.0% | |
| ! | TAAGGTATCCATGATTATGC+AGG | - | chr1_4:62480693-62480712 | Msa0176220:intron | 35.0% |
| AATAGTATCACCCTTCTTCA+CGG | + | chr1_4:62480719-62480738 | None:intergenic | 35.0% | |
| GAAGTGAAACAACTTCTGTA+TGG | - | chr1_4:62480764-62480783 | Msa0176220:intron | 35.0% | |
| ! | TACTTTTCTTTGACCTCCTT+AGG | - | chr1_4:62480887-62480906 | Msa0176220:intron | 35.0% |
| ! | ACTTTTCTTTGACCTCCTTA+GGG | - | chr1_4:62480888-62480907 | Msa0176220:intron | 35.0% |
| ATAACTGAATTACCCTAAGG+AGG | + | chr1_4:62480903-62480922 | None:intergenic | 35.0% | |
| TGGTATCTGTTTCACAATAC+AGG | - | chr1_4:62481216-62481235 | Msa0176220:intron | 35.0% | |
| TCTTCCTACTCTTACTGATA+AGG | - | chr1_4:62481339-62481358 | Msa0176220:intron | 35.0% | |
| GACCATTATACAATCACGAA+TGG | - | chr1_4:62481658-62481677 | Msa0176220:intron | 35.0% | |
| TAACTTAGGTAATACGCACA+TGG | - | chr1_4:62481752-62481771 | Msa0176220:intron | 35.0% | |
| AACTTAGGTAATACGCACAT+GGG | - | chr1_4:62481753-62481772 | Msa0176220:intron | 35.0% | |
| ! | GTTTATGTTTTCTAATGGCG+AGG | + | chr1_4:62481971-62481990 | None:intergenic | 35.0% |
| CAAAAATATGTGTCTGCTTG+AGG | + | chr1_4:62482047-62482066 | None:intergenic | 35.0% | |
| TGCAAAGATCGAAAATGTAG+AGG | - | chr1_4:62482065-62482084 | Msa0176220:intron | 35.0% | |
| ATTGTCTCTCGTGGAAATTT+GGG | - | chr1_4:62482269-62482288 | Msa0176220:intron | 35.0% | |
| TCAAACGTATACTAGAGAGA+CGG | + | chr1_4:62482434-62482453 | None:intergenic | 35.0% | |
| ATTACCATCCAATACTGCAT+TGG | + | chr1_4:62482619-62482638 | None:intergenic | 35.0% | |
| TCCGGTATGATCTAAGTTAT+GGG | - | chr1_4:62482682-62482701 | Msa0176220:CDS | 35.0% | |
| TACAGGGTATAATCCAGTAA+GGG | + | chr1_4:62482880-62482899 | None:intergenic | 35.0% | |
| CTGTAGAAATGGTTTCTACA+GGG | + | chr1_4:62482896-62482915 | None:intergenic | 35.0% | |
| ACTGTAGAAATGGTTTCTAC+AGG | + | chr1_4:62482897-62482916 | None:intergenic | 35.0% | |
| GTAGAAACCATTTCTACAGT+TGG | - | chr1_4:62482897-62482916 | Msa0176220:intron | 35.0% | |
| ! | TGTCACTTGTTAGTTATCTG+CGG | - | chr1_4:62483007-62483026 | Msa0176220:intron | 35.0% |
| TAATGAGAAATGTACTGCAG+AGG | + | chr1_4:62483275-62483294 | None:intergenic | 35.0% | |
| !! | ATTTTGGTATCTTGCTGACA+TGG | - | chr1_4:62483594-62483613 | Msa0176220:intron | 35.0% |
| ! | AGTGTTGTTATATATGGGGA+AGG | - | chr1_4:62483844-62483863 | Msa0176220:intron | 35.0% |
| ! | GTGTTGTTATATATGGGGAA+GGG | - | chr1_4:62483845-62483864 | Msa0176220:intron | 35.0% |
| !! | GAGGTTTTAATATCGTTCCT+TGG | + | chr1_4:62483874-62483893 | None:intergenic | 35.0% |
| ATTTGATCCAGTATTCGACT+CGG | + | chr1_4:62483919-62483938 | None:intergenic | 35.0% | |
| TAGGTTCCTCAAGAAGCAAA+GGG | + | chr1_4:62478696-62478715 | None:intergenic | 40.0% | |
| ATAGGTTCCTCAAGAAGCAA+AGG | + | chr1_4:62478697-62478716 | None:intergenic | 40.0% | |
| TGCTTCTTGAGGAACCTATT+AGG | - | chr1_4:62478698-62478717 | Msa0176220:three_prime_UTR | 40.0% | |
| TCTTGAGGAACCTATTAGGA+TGG | - | chr1_4:62478702-62478721 | Msa0176220:three_prime_UTR | 40.0% | |
| CTTGTCTTCTTCTGTGTGTT+TGG | - | chr1_4:62478991-62479010 | Msa0176220:intron | 40.0% | |
| ACCTTAGCTAAATGGAATGG+AGG | - | chr1_4:62479992-62480011 | Msa0176220:CDS | 40.0% | |
| CCTTAGCTAAATGGAATGGA+GGG | - | chr1_4:62479993-62480012 | Msa0176220:CDS | 40.0% | |
| CAACTGGCATATGGTAAGAA+AGG | + | chr1_4:62480154-62480173 | None:intergenic | 40.0% | |
| ! | AATGTCTCTTGGTGGTATTC+TGG | + | chr1_4:62480203-62480222 | None:intergenic | 40.0% |
| AGAATACCACCAAGAGACAT+TGG | - | chr1_4:62480202-62480221 | Msa0176220:intron | 40.0% | |
| AAGCACAAAAAAACTCTGCG+CGG | - | chr1_4:62480247-62480266 | Msa0176220:CDS | 40.0% | |
| !! | TCAGAAGGTATTTGCACGTA+TGG | + | chr1_4:62480370-62480389 | None:intergenic | 40.0% |
| TACGTGCAAATACCTTCTGA+AGG | - | chr1_4:62480370-62480389 | Msa0176220:CDS | 40.0% | |
| ACGTGCAAATACCTTCTGAA+GGG | - | chr1_4:62480371-62480390 | Msa0176220:intron | 40.0% | |
| CAGGTTATGCTAGATACTGT+AGG | - | chr1_4:62480433-62480452 | Msa0176220:intron | 40.0% | |
| TGTCTGCTTCAAGGGTAATT+GGG | + | chr1_4:62480492-62480511 | None:intergenic | 40.0% | |
| AAGTGATGTGTCTGCTTCAA+GGG | + | chr1_4:62480500-62480519 | None:intergenic | 40.0% | |
| GTAGCTTCTTTGTTCTGATC+TGG | + | chr1_4:62480532-62480551 | None:intergenic | 40.0% | |
| GAAAGGCCGCTAAAATTTAC+TGG | + | chr1_4:62480568-62480587 | None:intergenic | 40.0% | |
| AAGGTAGACTGACCTTTGAA+AGG | + | chr1_4:62480585-62480604 | None:intergenic | 40.0% | |
| AACAACTTCTGTATGGCTAG+AGG | - | chr1_4:62480771-62480790 | Msa0176220:intron | 40.0% | |
| AAAAACGATGCGACACTTTC+TGG | - | chr1_4:62481277-62481296 | Msa0176220:intron | 40.0% | |
| CATTGATGTAATCAAGCTGC+AGG | + | chr1_4:62481455-62481474 | None:intergenic | 40.0% | |
| ACTTAGGTAATACGCACATG+GGG | - | chr1_4:62481754-62481773 | Msa0176220:intron | 40.0% | |
| ACTTCCTCTCATTATACACC+CGG | - | chr1_4:62481794-62481813 | Msa0176220:intron | 40.0% | |
| TGAAGATGTTCGCCATGTAA+GGG | - | chr1_4:62481822-62481841 | Msa0176220:intron | 40.0% | |
| TAGCAGGTATATCCCTTACA+TGG | + | chr1_4:62481837-62481856 | None:intergenic | 40.0% | |
| GAGAGAACATAAAACGTAGC+AGG | + | chr1_4:62481853-62481872 | None:intergenic | 40.0% | |
| CTGCTTGAGGTCTTCAAATT+TGG | + | chr1_4:62482034-62482053 | None:intergenic | 40.0% | |
| TGTGAACTACAGCATTTGTC+TGG | + | chr1_4:62482140-62482159 | None:intergenic | 40.0% | |
| GAGATATTGAGAGAAGCAGA+TGG | - | chr1_4:62482242-62482261 | Msa0176220:intron | 40.0% | |
| CATTGTCTCTCGTGGAAATT+TGG | - | chr1_4:62482268-62482287 | Msa0176220:intron | 40.0% | |
| TTGTCTCTCGTGGAAATTTG+GGG | - | chr1_4:62482270-62482289 | Msa0176220:intron | 40.0% | |
| ! | CAATACTGCATTGGCAACAT+CGG | + | chr1_4:62482610-62482629 | None:intergenic | 40.0% |
| GTCCGGTATGATCTAAGTTA+TGG | - | chr1_4:62482681-62482700 | Msa0176220:CDS | 40.0% | |
| CCCCATAACTTAGATCATAC+CGG | + | chr1_4:62482686-62482705 | None:intergenic | 40.0% | |
| CCGGTATGATCTAAGTTATG+GGG | - | chr1_4:62482683-62482702 | Msa0176220:CDS | 40.0% | |
| CTACAGGGTATAATCCAGTA+AGG | + | chr1_4:62482881-62482900 | None:intergenic | 40.0% | |
| GCAGATAACTAACAAGTGAC+AGG | + | chr1_4:62483008-62483027 | None:intergenic | 40.0% | |
| ATTATTCTACTGCACTGTCC+AGG | - | chr1_4:62483162-62483181 | Msa0176220:intron | 40.0% | |
| GATTGTAAACTTTCTCTGCC+TGG | + | chr1_4:62483183-62483202 | None:intergenic | 40.0% | |
| ! | ATTGATTCCATGTGGCTCAT+AGG | + | chr1_4:62483247-62483266 | None:intergenic | 40.0% |
| !! | AGGAAGCTATTGATTCCATG+TGG | + | chr1_4:62483255-62483274 | None:intergenic | 40.0% |
| AACAGAAGCCTTAACCTTGA+CGG | + | chr1_4:62483395-62483414 | None:intergenic | 40.0% | |
| ATGACTGTCATATCCGAATG+TGG | + | chr1_4:62483558-62483577 | None:intergenic | 40.0% | |
| TGAAGACAAATCAACTCCGA+TGG | - | chr1_4:62483712-62483731 | Msa0176220:intron | 40.0% | |
| !!! | GAATTTGCCTTTTTTCGTGC+AGG | - | chr1_4:62483968-62483987 | Msa0176220:intron | 40.0% |
| ! | TTGAAGGTTGCTTTAGACCA+TGG | - | chr1_4:62484023-62484042 | Msa0176220:intron | 40.0% |
| ! | CTTTCTGGCAAACAACAACT+CGG | + | chr1_4:62484079-62484098 | None:intergenic | 40.0% |
| !! | GTTGTTGTTTGCCAGAAAGT+TGG | - | chr1_4:62484080-62484099 | Msa0176220:intron | 40.0% |
| AGGATGGAAGCCATCCTAAT+AGG | + | chr1_4:62478715-62478734 | None:intergenic | 45.0% | |
| GAGATACTGACAGGTTTGGA+TGG | + | chr1_4:62478742-62478761 | None:intergenic | 45.0% | |
| GATGGAGATACTGACAGGTT+TGG | + | chr1_4:62478746-62478765 | None:intergenic | 45.0% | |
| AGAGAGATGGAGATACTGAC+AGG | + | chr1_4:62478751-62478770 | None:intergenic | 45.0% | |
| CTACACCTCCAGAACCAATT+TGG | - | chr1_4:62479114-62479133 | Msa0176220:CDS | 45.0% | |
| ! | GAAGTGGTCCAAATTGGTTC+TGG | + | chr1_4:62479125-62479144 | None:intergenic | 45.0% |
| ACATTCCTGCATCAAGGCAT+CGG | + | chr1_4:62479634-62479653 | None:intergenic | 45.0% | |
| TACCAGACATTCCTGCATCA+AGG | + | chr1_4:62479640-62479659 | None:intergenic | 45.0% | |
| CCCTCCATTCCATTTAGCTA+AGG | + | chr1_4:62479996-62480015 | None:intergenic | 45.0% | |
| ATGGAGGGAGTAACACTTTG+TGG | - | chr1_4:62480008-62480027 | Msa0176220:CDS | 45.0% | |
| CTTACCATATGCCAGTTGCA+CGG | - | chr1_4:62480156-62480175 | Msa0176220:intron | 45.0% | |
| ! | TTGCACGGTTTGACTTCTCA+TGG | - | chr1_4:62480171-62480190 | Msa0176220:intron | 45.0% |
| ! | TGCACGGTTTGACTTCTCAT+GGG | - | chr1_4:62480172-62480191 | Msa0176220:intron | 45.0% |
| GTGTCTGCTTCAAGGGTAAT+TGG | + | chr1_4:62480493-62480512 | None:intergenic | 45.0% | |
| CAAGTGATGTGTCTGCTTCA+AGG | + | chr1_4:62480501-62480520 | None:intergenic | 45.0% | |
| ATTATGCAGGCCGTGAAGAA+GGG | - | chr1_4:62480706-62480725 | Msa0176220:intron | 45.0% | |
| TTTCACAATACAGGTCAGCG+AGG | - | chr1_4:62481225-62481244 | Msa0176220:intron | 45.0% | |
| CTTAGGTAATACGCACATGG+GGG | - | chr1_4:62481755-62481774 | Msa0176220:intron | 45.0% | |
| TTAGGTAATACGCACATGGG+GGG | - | chr1_4:62481756-62481775 | Msa0176220:intron | 45.0% | |
| CTGAAGATGTTCGCCATGTA+AGG | - | chr1_4:62481821-62481840 | Msa0176220:intron | 45.0% | |
| ! | TGCGTCCGATTTTCATTTGC+AGG | - | chr1_4:62481993-62482012 | Msa0176220:intron | 45.0% |
| ACGGGCCTGCAAATGAAAAT+CGG | + | chr1_4:62482001-62482020 | None:intergenic | 45.0% | |
| GATGGTATCATTGTCTCTCG+TGG | - | chr1_4:62482260-62482279 | Msa0176220:intron | 45.0% | |
| AAGTAGATACCGACCTTCTC+AGG | + | chr1_4:62482308-62482327 | None:intergenic | 45.0% | |
| AGAAGGTCGGTATCTACTTC+CGG | - | chr1_4:62482309-62482328 | Msa0176220:CDS | 45.0% | |
| AGACGGAGGAATGCTGTAAA+AGG | + | chr1_4:62482417-62482436 | None:intergenic | 45.0% | |
| AACGTATACTAGAGAGACGG+AGG | + | chr1_4:62482431-62482450 | None:intergenic | 45.0% | |
| CGATGTTGCCAATGCAGTAT+TGG | - | chr1_4:62482608-62482627 | Msa0176220:intron | 45.0% | |
| ! | GTTGCCAATGCAGTATTGGA+TGG | - | chr1_4:62482612-62482631 | Msa0176220:CDS | 45.0% |
| GCAGTGATGCAATTCTCCTT+GGG | - | chr1_4:62482847-62482866 | Msa0176220:intron | 45.0% | |
| CAGTGATGCAATTCTCCTTG+GGG | - | chr1_4:62482848-62482867 | Msa0176220:intron | 45.0% | |
| CTAACAAGTGACAGGATCAC+AGG | + | chr1_4:62483000-62483019 | None:intergenic | 45.0% | |
| TGCTCGAACCTGTATGTTTC+AGG | + | chr1_4:62483371-62483390 | None:intergenic | 45.0% | |
| ATCATCTGCTTCACCTCATC+TGG | - | chr1_4:62483415-62483434 | Msa0176220:intron | 45.0% | |
| ACAGATATCACAGGCATGGT+TGG | + | chr1_4:62483678-62483697 | None:intergenic | 45.0% | |
| GGAATGACGACAGATATCAC+AGG | + | chr1_4:62483687-62483706 | None:intergenic | 45.0% | |
| !! | ATCATTCTTACAGGGTGTCG+AGG | + | chr1_4:62483807-62483826 | None:intergenic | 45.0% |
| TATATGGGGAAGGGTAACCA+AGG | - | chr1_4:62483854-62483873 | Msa0176220:intron | 45.0% | |
| ! | TTAGACCATGGCAAGGCTTT+TGG | - | chr1_4:62484035-62484054 | Msa0176220:intron | 45.0% |
| CAAACAACAACTCGGTCATG+TGG | + | chr1_4:62484071-62484090 | None:intergenic | 45.0% | |
| TTCCTCAAGAAGCAAAGGGC+TGG | + | chr1_4:62478692-62478711 | None:intergenic | 50.0% | |
| !! | AGGTTTGGATGGCTCTAGGA+TGG | + | chr1_4:62478731-62478750 | None:intergenic | 50.0% |
| TGACAGGTTTGGATGGCTCT+AGG | + | chr1_4:62478735-62478754 | None:intergenic | 50.0% | |
| !! | GTGGTCCAAATTGGTTCTGG+AGG | + | chr1_4:62479122-62479141 | None:intergenic | 50.0% |
| ATTACCCGATGCCTTGATGC+AGG | - | chr1_4:62479626-62479645 | Msa0176220:CDS | 50.0% | |
| ! | CATTCCTGCATCAAGGCATC+GGG | + | chr1_4:62479633-62479652 | None:intergenic | 50.0% |
| TGCCTTGATGCAGGAATGTC+TGG | - | chr1_4:62479635-62479654 | Msa0176220:CDS | 50.0% | |
| CAAACCGTGCAACTGGCATA+TGG | + | chr1_4:62480163-62480182 | None:intergenic | 50.0% | |
| GAGAAGTCAAACCGTGCAAC+TGG | + | chr1_4:62480170-62480189 | None:intergenic | 50.0% | |
| ! | GCACGGTTTGACTTCTCATG+GGG | - | chr1_4:62480173-62480192 | Msa0176220:intron | 50.0% |
| CTTCACGGCCTGCATAATCA+TGG | + | chr1_4:62480704-62480723 | None:intergenic | 50.0% | |
| GATTATGCAGGCCGTGAAGA+AGG | - | chr1_4:62480705-62480724 | Msa0176220:intron | 50.0% | |
| ATACAGGTCAGCGAGGTGAA+TGG | - | chr1_4:62481232-62481251 | Msa0176220:intron | 50.0% | |
| GATAGATCTCCCACCTGAGA+AGG | - | chr1_4:62482292-62482311 | Msa0176220:CDS | 50.0% | |
| AGATACCGACCTTCTCAGGT+GGG | + | chr1_4:62482304-62482323 | None:intergenic | 50.0% | |
| TAGATACCGACCTTCTCAGG+TGG | + | chr1_4:62482305-62482324 | None:intergenic | 50.0% | |
| ACCACACGTGTGACAACAAC+GGG | + | chr1_4:62482543-62482562 | None:intergenic | 50.0% | |
| GACCACACGTGTGACAACAA+CGG | + | chr1_4:62482544-62482563 | None:intergenic | 50.0% | |
| GGCAGTGATGCAATTCTCCT+TGG | - | chr1_4:62482846-62482865 | Msa0176220:intron | 50.0% | |
| TCTGCTTCACCTCATCTGGA+AGG | - | chr1_4:62483419-62483438 | Msa0176220:intron | 50.0% | |
| CTGCTTCACCTCATCTGGAA+GGG | - | chr1_4:62483420-62483439 | Msa0176220:intron | 50.0% | |
| GACGACAGATATCACAGGCA+TGG | + | chr1_4:62483682-62483701 | None:intergenic | 50.0% | |
| CAACTCCGATGGACATTCAC+CGG | - | chr1_4:62483723-62483742 | Msa0176220:intron | 50.0% | |
| ! | ATGCACCGGTGAATGTCCAT+CGG | + | chr1_4:62483731-62483750 | None:intergenic | 50.0% |
| GACATTCACCGGTGCATTTC+AGG | - | chr1_4:62483734-62483753 | Msa0176220:intron | 50.0% | |
| CGGCAGTCACTTATTGTGAG+AGG | - | chr1_4:62483759-62483778 | Msa0176220:intron | 50.0% | |
| ! | GAGAGGTCTTTTCCCTATGC+TGG | - | chr1_4:62483776-62483795 | Msa0176220:intron | 50.0% |
| ! | AGGTCTTTTCCCTATGCTGG+CGG | - | chr1_4:62483779-62483798 | Msa0176220:intron | 50.0% |
| ! | GCACAGCATTTTCCCGATTG+AGG | + | chr1_4:62483893-62483912 | None:intergenic | 50.0% |
| CAATCGGGAAAATGCTGTGC+AGG | - | chr1_4:62483893-62483912 | Msa0176220:intron | 50.0% | |
| GATTCGGCCTGCACGAAAAA+AGG | + | chr1_4:62483978-62483997 | None:intergenic | 50.0% | |
| ! | GGTTGCTTTAGACCATGGCA+AGG | - | chr1_4:62484028-62484047 | Msa0176220:intron | 50.0% |
| TGATGCCAAAAGCCTTGCCA+TGG | + | chr1_4:62484043-62484062 | None:intergenic | 50.0% | |
| CTGACGAGTCACCAACTTTC+TGG | + | chr1_4:62484094-62484113 | None:intergenic | 50.0% | |
| GTCCAGCCCTTTGCTTCTTG+AGG | - | chr1_4:62478687-62478706 | Msa0176220:three_prime_UTR | 55.0% | |
| CGTGCCGGGTGTATAATGAG+AGG | + | chr1_4:62481801-62481820 | None:intergenic | 55.0% | |
| GATCTCCCACCTGAGAAGGT+CGG | - | chr1_4:62482296-62482315 | Msa0176220:CDS | 55.0% | |
| TCGGTTGCTTCAGCACGAGT+AGG | + | chr1_4:62482591-62482610 | None:intergenic | 55.0% | |
| TCGAGCAGCCGTCAAGGTTA+AGG | - | chr1_4:62483384-62483403 | Msa0176220:intron | 55.0% | |
| TCACCGGTGCATTTCAGGCT+CGG | - | chr1_4:62483739-62483758 | Msa0176220:intron | 55.0% | |
| GTGCAGGCCGAATCGAATAC+TGG | - | chr1_4:62483984-62484003 | Msa0176220:intron | 55.0% | |
| GCGAACATCTTCAGCGTGCC+GGG | + | chr1_4:62481815-62481834 | None:intergenic | 60.0% | |
| GGCGAACATCTTCAGCGTGC+CGG | + | chr1_4:62481816-62481835 | None:intergenic | 60.0% | |
| GCCCGTTGTTGTCACACGTG+TGG | - | chr1_4:62482539-62482558 | Msa0176220:intron | 60.0% | |
| CAGTAAGGGTCTCTGCCCCA+AGG | + | chr1_4:62482866-62482885 | None:intergenic | 60.0% | |
| CTTGGGGCAGAGACCCTTAC+TGG | - | chr1_4:62482864-62482883 | Msa0176220:intron | 60.0% | |
| GGGAGAGCCTATGAGCCACA+TGG | - | chr1_4:62483237-62483256 | Msa0176220:CDS | 60.0% | |
| ACAGGTTCGAGCAGCCGTCA+AGG | - | chr1_4:62483378-62483397 | Msa0176220:intron | 60.0% | |
| CCTTGCAGCCCTTCCAGATG+AGG | + | chr1_4:62483431-62483450 | None:intergenic | 60.0% | |
| CCTCATCTGGAAGGGCTGCA+AGG | - | chr1_4:62483428-62483447 | Msa0176220:intron | 60.0% | |
| CTGCCGAGCCTGAAATGCAC+CGG | + | chr1_4:62483745-62483764 | None:intergenic | 60.0% | |
| GTCGAGGATCCGCCAGCATA+GGG | + | chr1_4:62483791-62483810 | None:intergenic | 60.0% | |
| TGTCGAGGATCCGCCAGCAT+AGG | + | chr1_4:62483792-62483811 | None:intergenic | 60.0% | |
| GTGCAGGCCGAGTCGAATAC+TGG | - | chr1_4:62483909-62483928 | Msa0176220:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 62478591 | 62484287 | 62478591 | ID=Msa0176220;Name=Msa0176220 |
| chr1_4 | mRNA | 62478591 | 62484287 | 62478591 | ID=Msa0176220-mRNA-1;Parent=Msa0176220;Name=Msa0176220-mRNA-1;_AED=0.15;_eAED=0.15;_QI=91|1|1|1|0.85|0.93|15|145|526 |
| chr1_4 | exon | 62478591 | 62478888 | 62478591 | ID=Msa0176220-mRNA-1:exon:20107;Parent=Msa0176220-mRNA-1 |
| chr1_4 | exon | 62479063 | 62479222 | 62479063 | ID=Msa0176220-mRNA-1:exon:20106;Parent=Msa0176220-mRNA-1 |
| chr1_4 | exon | 62479429 | 62479496 | 62479429 | ID=Msa0176220-mRNA-1:exon:20105;Parent=Msa0176220-mRNA-1 |
| chr1_4 | exon | 62479599 | 62479694 | 62479599 | ID=Msa0176220-mRNA-1:exon:20104;Parent=Msa0176220-mRNA-1 |
| chr1_4 | exon | 62479943 | 62480031 | 62479943 | ID=Msa0176220-mRNA-1:exon:20103;Parent=Msa0176220-mRNA-1 |
| chr1_4 | exon | 62480245 | 62480389 | 62480245 | ID=Msa0176220-mRNA-1:exon:20102;Parent=Msa0176220-mRNA-1 |
| chr1_4 | exon | 62480565 | 62480654 | 62480565 | ID=Msa0176220-mRNA-1:exon:20101;Parent=Msa0176220-mRNA-1 |
| chr1_4 | exon | 62480792 | 62480863 | 62480792 | ID=Msa0176220-mRNA-1:exon:20100;Parent=Msa0176220-mRNA-1 |
| chr1_4 | exon | 62481041 | 62481118 | 62481041 | ID=Msa0176220-mRNA-1:exon:20099;Parent=Msa0176220-mRNA-1 |
| chr1_4 | exon | 62481509 | 62481640 | 62481509 | ID=Msa0176220-mRNA-1:exon:20098;Parent=Msa0176220-mRNA-1 |
| chr1_4 | exon | 62482086 | 62482163 | 62482086 | ID=Msa0176220-mRNA-1:exon:20097;Parent=Msa0176220-mRNA-1 |
| chr1_4 | exon | 62482287 | 62482442 | 62482287 | ID=Msa0176220-mRNA-1:exon:20096;Parent=Msa0176220-mRNA-1 |
| chr1_4 | exon | 62482610 | 62482707 | 62482610 | ID=Msa0176220-mRNA-1:exon:20095;Parent=Msa0176220-mRNA-1 |
| chr1_4 | exon | 62483222 | 62483318 | 62483222 | ID=Msa0176220-mRNA-1:exon:20094;Parent=Msa0176220-mRNA-1 |
| chr1_4 | exon | 62484128 | 62484287 | 62484128 | ID=Msa0176220-mRNA-1:exon:20093;Parent=Msa0176220-mRNA-1 |
| chr1_4 | five_prime_UTR | 62484197 | 62484287 | 62484197 | ID=Msa0176220-mRNA-1:five_prime_utr;Parent=Msa0176220-mRNA-1 |
| chr1_4 | CDS | 62484128 | 62484196 | 62484128 | ID=Msa0176220-mRNA-1:cds;Parent=Msa0176220-mRNA-1 |
| chr1_4 | CDS | 62483222 | 62483318 | 62483222 | ID=Msa0176220-mRNA-1:cds;Parent=Msa0176220-mRNA-1 |
| chr1_4 | CDS | 62482610 | 62482707 | 62482610 | ID=Msa0176220-mRNA-1:cds;Parent=Msa0176220-mRNA-1 |
| chr1_4 | CDS | 62482287 | 62482442 | 62482287 | ID=Msa0176220-mRNA-1:cds;Parent=Msa0176220-mRNA-1 |
| chr1_4 | CDS | 62482086 | 62482163 | 62482086 | ID=Msa0176220-mRNA-1:cds;Parent=Msa0176220-mRNA-1 |
| chr1_4 | CDS | 62481509 | 62481640 | 62481509 | ID=Msa0176220-mRNA-1:cds;Parent=Msa0176220-mRNA-1 |
| chr1_4 | CDS | 62481041 | 62481118 | 62481041 | ID=Msa0176220-mRNA-1:cds;Parent=Msa0176220-mRNA-1 |
| chr1_4 | CDS | 62480792 | 62480863 | 62480792 | ID=Msa0176220-mRNA-1:cds;Parent=Msa0176220-mRNA-1 |
| chr1_4 | CDS | 62480565 | 62480654 | 62480565 | ID=Msa0176220-mRNA-1:cds;Parent=Msa0176220-mRNA-1 |
| chr1_4 | CDS | 62480245 | 62480389 | 62480245 | ID=Msa0176220-mRNA-1:cds;Parent=Msa0176220-mRNA-1 |
| chr1_4 | CDS | 62479943 | 62480031 | 62479943 | ID=Msa0176220-mRNA-1:cds;Parent=Msa0176220-mRNA-1 |
| chr1_4 | CDS | 62479599 | 62479694 | 62479599 | ID=Msa0176220-mRNA-1:cds;Parent=Msa0176220-mRNA-1 |
| chr1_4 | CDS | 62479429 | 62479496 | 62479429 | ID=Msa0176220-mRNA-1:cds;Parent=Msa0176220-mRNA-1 |
| chr1_4 | CDS | 62479063 | 62479222 | 62479063 | ID=Msa0176220-mRNA-1:cds;Parent=Msa0176220-mRNA-1 |
| chr1_4 | CDS | 62478736 | 62478888 | 62478736 | ID=Msa0176220-mRNA-1:cds;Parent=Msa0176220-mRNA-1 |
| chr1_4 | three_prime_UTR | 62478591 | 62478735 | 62478591 | ID=Msa0176220-mRNA-1:three_prime_utr;Parent=Msa0176220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
