Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1352580 | XP_003626337.1 | 94.702 | 151 | 4 | 1 | 1 | 151 | 1 | 147 | 4.22e-97 | 286 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1352580 | sp|Q8L9T7|AHP5_ARATH | 54.730 | 148 | 67 | 0 | 4 | 151 | 6 | 153 | 5.13e-56 | 175 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1352580 | A2Q3H8 | 94.702 | 151 | 4 | 1 | 1 | 151 | 1 | 147 | 2.02e-97 | 286 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007810 | Msa1352580 | -0.809201 | 2.126947e-50 | -8.615850e-47 |
| Msa0013270 | Msa1352580 | 0.807298 | 5.411049e-50 | -8.615850e-47 |
| Msa0022400 | Msa1352580 | 0.800584 | 1.345752e-48 | -8.615850e-47 |
| Msa0026250 | Msa1352580 | 0.803667 | 3.124345e-49 | -8.615850e-47 |
| Msa0029700 | Msa1352580 | 0.802897 | 4.510433e-49 | -8.615850e-47 |
| Msa0032130 | Msa1352580 | 0.800852 | 1.186704e-48 | -8.615850e-47 |
| Msa0032390 | Msa1352580 | 0.811815 | 5.795942e-51 | -8.615850e-47 |
| Msa0037660 | Msa1352580 | 0.808950 | 2.407434e-50 | -8.615850e-47 |
| Msa0038150 | Msa1352580 | -0.819177 | 1.331746e-52 | -8.615850e-47 |
| Msa0039750 | Msa1352580 | 0.802174 | 6.358266e-49 | -8.615850e-47 |
| Msa0044440 | Msa1352580 | 0.804109 | 2.529697e-49 | -8.615850e-47 |
| Msa0045620 | Msa1352580 | 0.817849 | 2.663422e-52 | -8.615850e-47 |
| Msa0045810 | Msa1352580 | 0.810210 | 1.290753e-50 | -8.615850e-47 |
| Msa0050530 | Msa1352580 | 0.823397 | 1.415857e-53 | -8.615850e-47 |
| Msa0056230 | Msa1352580 | -0.807819 | 4.195611e-50 | -8.615850e-47 |
| Msa0063190 | Msa1352580 | 0.801993 | 6.926873e-49 | -8.615850e-47 |
| Msa0063940 | Msa1352580 | 0.809084 | 2.253763e-50 | -8.615850e-47 |
| Msa0078160 | Msa1352580 | -0.805351 | 1.392421e-49 | -8.615850e-47 |
| Msa0079880 | Msa1352580 | 0.803345 | 3.644368e-49 | -8.615850e-47 |
| Msa0080030 | Msa1352580 | 0.805870 | 1.083340e-49 | -8.615850e-47 |
| Msa0080820 | Msa1352580 | 0.805132 | 1.547525e-49 | -8.615850e-47 |
| Msa0089540 | Msa1352580 | 0.817352 | 3.448276e-52 | -8.615850e-47 |
| Msa0092350 | Msa1352580 | 0.812302 | 4.539086e-51 | -8.615850e-47 |
| Msa0094560 | Msa1352580 | 0.813526 | 2.448342e-51 | -8.615850e-47 |
| Msa0100600 | Msa1352580 | 0.831269 | 1.836509e-55 | -8.615850e-47 |
| Msa0100890 | Msa1352580 | 0.820924 | 5.302937e-53 | -8.615850e-47 |
| Msa0101530 | Msa1352580 | 0.802419 | 5.661355e-49 | -8.615850e-47 |
| Msa0110240 | Msa1352580 | 0.817936 | 2.546566e-52 | -8.615850e-47 |
| Msa0118150 | Msa1352580 | 0.817734 | 2.828321e-52 | -8.615850e-47 |
| Msa0119290 | Msa1352580 | 0.801781 | 7.656257e-49 | -8.615850e-47 |
| Msa1352580 | Msa1352600 | -0.810485 | 1.126079e-50 | -8.615850e-47 |
| Msa1352580 | Msa1360070 | -0.802767 | 4.798098e-49 | -8.615850e-47 |
| Msa1352580 | Msa1362590 | 0.803666 | 3.126476e-49 | -8.615850e-47 |
| Msa1352580 | Msa1363010 | 0.805186 | 1.507582e-49 | -8.615850e-47 |
| Msa1352580 | Msa1363280 | -0.832744 | 7.936009e-56 | -8.615850e-47 |
| Msa1352580 | Msa1365130 | -0.802753 | 4.831696e-49 | -8.615850e-47 |
| Msa1352580 | Msa1365230 | 0.825799 | 3.848124e-54 | -8.615850e-47 |
| Msa1352580 | Msa1366140 | -0.839086 | 1.955246e-57 | -8.615850e-47 |
| Msa1352580 | Msa1367900 | -0.804759 | 1.851310e-49 | -8.615850e-47 |
| Msa1352580 | Msa1368170 | 0.808455 | 3.071107e-50 | -8.615850e-47 |
| Msa1352580 | Msa1371270 | 0.814595 | 1.422551e-51 | -8.615850e-47 |
| Msa1352580 | Msa1371800 | 0.823175 | 1.595475e-53 | -8.615850e-47 |
| Msa1352580 | Msa1376310 | 0.824333 | 8.543013e-54 | -8.615850e-47 |
| Msa1352580 | Msa1379940 | 0.871180 | 8.314492e-67 | -8.615850e-47 |
| Msa1352580 | Msa1385570 | 0.805789 | 1.126537e-49 | -8.615850e-47 |
| Msa1352580 | Msa1387450 | -0.823146 | 1.620834e-53 | -8.615850e-47 |
| Msa1352580 | Msa1395050 | 0.804983 | 1.661931e-49 | -8.615850e-47 |
| Msa1352580 | Msa1396200 | -0.806916 | 6.518643e-50 | -8.615850e-47 |
| Msa1352580 | Msa1398490 | 0.800537 | 1.375538e-48 | -8.615850e-47 |
| Msa1352580 | Msa1407810 | 0.807079 | 6.021525e-50 | -8.615850e-47 |
| Msa1352580 | Msa1413020 | 0.819710 | 1.006932e-52 | -8.615850e-47 |
| Msa1352580 | Msa1420830 | 0.820692 | 5.997575e-53 | -8.615850e-47 |
| Msa1352580 | Msa1422160 | -0.816069 | 6.685877e-52 | -8.615850e-47 |
| Msa1352580 | Msa1433360 | 0.815906 | 7.272403e-52 | -8.615850e-47 |
| Msa1352580 | Msa1434300 | 0.807369 | 5.227009e-50 | -8.615850e-47 |
| Msa1352580 | Msa1434700 | 0.806544 | 7.813479e-50 | -8.615850e-47 |
| Msa1352580 | Msa1437780 | 0.807854 | 4.123640e-50 | -8.615850e-47 |
| Msa1352580 | Msa1438510 | 0.838718 | 2.434131e-57 | -8.615850e-47 |
| Msa1352580 | Msa1445530 | 0.816956 | 4.232434e-52 | -8.615850e-47 |
| Msa1352580 | Msa1447900 | 0.808890 | 2.479330e-50 | -8.615850e-47 |
| Msa1352580 | Msa1450290 | 0.806947 | 6.423091e-50 | -8.615850e-47 |
| Msa1352580 | Msa1456040 | 0.809506 | 1.829243e-50 | -8.615850e-47 |
| Msa1352580 | Msa1461660 | 0.811390 | 7.171789e-51 | -8.615850e-47 |
| Msa1352580 | Msa1462210 | -0.804639 | 1.961201e-49 | -8.615850e-47 |
| Msa1352580 | Msa1462780 | 0.831423 | 1.683843e-55 | -8.615850e-47 |
| Msa0605350 | Msa1352580 | 0.827297 | 1.690870e-54 | -8.615850e-47 |
| Msa0605520 | Msa1352580 | 0.831518 | 1.594982e-55 | -8.615850e-47 |
| Msa0610690 | Msa1352580 | 0.829335 | 5.453370e-55 | -8.615850e-47 |
| Msa0612880 | Msa1352580 | -0.816051 | 6.750860e-52 | -8.615850e-47 |
| Msa0623310 | Msa1352580 | 0.833975 | 3.915623e-56 | -8.615850e-47 |
| Msa0626980 | Msa1352580 | 0.805581 | 1.245682e-49 | -8.615850e-47 |
| Msa0627360 | Msa1352580 | 0.800235 | 1.585072e-48 | -8.615850e-47 |
| Msa0630440 | Msa1352580 | 0.823603 | 1.267517e-53 | -8.615850e-47 |
| Msa0646260 | Msa1352580 | 0.824425 | 8.128332e-54 | -8.615850e-47 |
| Msa0658120 | Msa1352580 | 0.816666 | 4.916456e-52 | -8.615850e-47 |
| Msa0673940 | Msa1352580 | 0.837527 | 4.932661e-57 | -8.615850e-47 |
| Msa0685390 | Msa1352580 | -0.820655 | 6.114862e-53 | -8.615850e-47 |
| Msa0685610 | Msa1352580 | 0.840020 | 1.117884e-57 | -8.615850e-47 |
| Msa0689660 | Msa1352580 | 0.814109 | 1.821313e-51 | -8.615850e-47 |
| Msa0689830 | Msa1352580 | 0.814557 | 1.449883e-51 | -8.615850e-47 |
| Msa0702970 | Msa1352580 | 0.804911 | 1.720859e-49 | -8.615850e-47 |
| Msa0704690 | Msa1352580 | 0.838538 | 2.709454e-57 | -8.615850e-47 |
| Msa0706130 | Msa1352580 | -0.801688 | 8.001777e-49 | -8.615850e-47 |
| Msa0706690 | Msa1352580 | 0.819503 | 1.122609e-52 | -8.615850e-47 |
| Msa0707260 | Msa1352580 | 0.800769 | 1.233487e-48 | -8.615850e-47 |
| Msa0708020 | Msa1352580 | 0.803029 | 4.237097e-49 | -8.615850e-47 |
| Msa0733240 | Msa1352580 | -0.807683 | 4.485029e-50 | -8.615850e-47 |
| Msa0742370 | Msa1352580 | -0.804741 | 1.867149e-49 | -8.615850e-47 |
| Msa0751720 | Msa1352580 | 0.810778 | 9.732247e-51 | -8.615850e-47 |
| Msa0752780 | Msa1352580 | 0.814258 | 1.688262e-51 | -8.615850e-47 |
| Msa0756670 | Msa1352580 | -0.825977 | 3.492042e-54 | -8.615850e-47 |
| Msa0761830 | Msa1352580 | 0.834118 | 3.604779e-56 | -8.615850e-47 |
| Msa0774060 | Msa1352580 | 0.811364 | 7.264426e-51 | -8.615850e-47 |
| Msa0801320 | Msa1352580 | -0.814781 | 1.293728e-51 | -8.615850e-47 |
| Msa0804170 | Msa1352580 | 0.817029 | 4.075136e-52 | -8.615850e-47 |
| Msa0812020 | Msa1352580 | -0.812507 | 4.094609e-51 | -8.615850e-47 |
| Msa0827340 | Msa1352580 | -0.819271 | 1.268094e-52 | -8.615850e-47 |
| Msa0828350 | Msa1352580 | 0.801054 | 1.079222e-48 | -8.615850e-47 |
| Msa0831820 | Msa1352580 | 0.805272 | 1.446280e-49 | -8.615850e-47 |
| Msa0836060 | Msa1352580 | -0.810788 | 9.684663e-51 | -8.615850e-47 |
| Msa0121320 | Msa1352580 | 0.815508 | 8.920983e-52 | -8.615850e-47 |
| Msa0122170 | Msa1352580 | -0.804849 | 1.773242e-49 | -8.615850e-47 |
| Msa0124960 | Msa1352580 | 0.800542 | 1.372704e-48 | -8.615850e-47 |
| Msa0132080 | Msa1352580 | -0.811121 | 8.201915e-51 | -8.615850e-47 |
| Msa0147680 | Msa1352580 | 0.823325 | 1.471936e-53 | -8.615850e-47 |
| Msa0152190 | Msa1352580 | -0.812834 | 3.472803e-51 | -8.615850e-47 |
| Msa0164170 | Msa1352580 | 0.807504 | 4.895134e-50 | -8.615850e-47 |
| Msa0164470 | Msa1352580 | 0.802760 | 4.815403e-49 | -8.615850e-47 |
| Msa0165640 | Msa1352580 | 0.813436 | 2.562558e-51 | -8.615850e-47 |
| Msa0166180 | Msa1352580 | 0.803224 | 3.860963e-49 | -8.615850e-47 |
| Msa0168380 | Msa1352580 | 0.819055 | 1.419590e-52 | -8.615850e-47 |
| Msa0176220 | Msa1352580 | 0.806476 | 8.076009e-50 | -8.615850e-47 |
| Msa0185690 | Msa1352580 | 0.812911 | 3.340529e-51 | -8.615850e-47 |
| Msa0197170 | Msa1352580 | 0.803132 | 4.033447e-49 | -8.615850e-47 |
| Msa0206370 | Msa1352580 | 0.830566 | 2.732908e-55 | -8.615850e-47 |
| Msa0221460 | Msa1352580 | -0.825994 | 3.460832e-54 | -8.615850e-47 |
| Msa0235080 | Msa1352580 | 0.803169 | 3.962270e-49 | -8.615850e-47 |
| Msa1231560 | Msa1352580 | 0.800761 | 1.238167e-48 | -8.615850e-47 |
| Msa1242160 | Msa1352580 | 0.813519 | 2.456904e-51 | -8.615850e-47 |
| Msa1246830 | Msa1352580 | 0.804163 | 2.464306e-49 | -8.615850e-47 |
| Msa1250660 | Msa1352580 | 0.825242 | 5.216723e-54 | -8.615850e-47 |
| Msa1251410 | Msa1352580 | 0.848750 | 5.022368e-60 | -8.615850e-47 |
| Msa1253270 | Msa1352580 | 0.801379 | 9.259374e-49 | -8.615850e-47 |
| Msa1265570 | Msa1352580 | 0.826663 | 2.397347e-54 | -8.615850e-47 |
| Msa1266120 | Msa1352580 | -0.819010 | 1.453223e-52 | -8.615850e-47 |
| Msa1283930 | Msa1352580 | 0.814063 | 1.864450e-51 | -8.615850e-47 |
| Msa1283980 | Msa1352580 | 0.820106 | 8.172714e-53 | -8.615850e-47 |
| Msa1290090 | Msa1352580 | -0.800352 | 1.500205e-48 | -8.615850e-47 |
| Msa1297220 | Msa1352580 | -0.812805 | 3.524018e-51 | -8.615850e-47 |
| Msa1322960 | Msa1352580 | 0.825941 | 3.562260e-54 | -8.615850e-47 |
| Msa1322980 | Msa1352580 | 0.831238 | 1.869595e-55 | -8.615850e-47 |
| Msa1323260 | Msa1352580 | -0.807495 | 4.916941e-50 | -8.615850e-47 |
| Msa1328280 | Msa1352580 | 0.811518 | 6.726511e-51 | -8.615850e-47 |
| Msa1331570 | Msa1352580 | -0.824252 | 8.928948e-54 | -8.615850e-47 |
| Msa1334560 | Msa1352580 | 0.803521 | 3.350879e-49 | -8.615850e-47 |
| Msa1334670 | Msa1352580 | 0.824481 | 7.885542e-54 | -8.615850e-47 |
| Msa1343450 | Msa1352580 | -0.810994 | 8.740623e-51 | -8.615850e-47 |
| Msa1343460 | Msa1352580 | 0.818780 | 1.639062e-52 | -8.615850e-47 |
| Msa0364910 | Msa1352580 | -0.800769 | 1.233808e-48 | -8.615850e-47 |
| Msa0371350 | Msa1352580 | -0.814014 | 1.911662e-51 | -8.615850e-47 |
| Msa0372100 | Msa1352580 | 0.833824 | 4.272543e-56 | -8.615850e-47 |
| Msa0384590 | Msa1352580 | 0.831030 | 2.103174e-55 | -8.615850e-47 |
| Msa0388250 | Msa1352580 | 0.812982 | 3.223445e-51 | -8.615850e-47 |
| Msa0395300 | Msa1352580 | -0.812214 | 4.744263e-51 | -8.615850e-47 |
| Msa0401060 | Msa1352580 | 0.821339 | 4.256225e-53 | -8.615850e-47 |
| Msa0416210 | Msa1352580 | 0.854749 | 1.000350e-61 | -8.615850e-47 |
| Msa0419420 | Msa1352580 | -0.820667 | 6.076341e-53 | -8.615850e-47 |
| Msa0421220 | Msa1352580 | -0.822290 | 2.563975e-53 | -8.615850e-47 |
| Msa0427260 | Msa1352580 | -0.818562 | 1.837133e-52 | -8.615850e-47 |
| Msa0432200 | Msa1352580 | 0.813052 | 3.111474e-51 | -8.615850e-47 |
| Msa0432260 | Msa1352580 | -0.800145 | 1.653016e-48 | -8.615850e-47 |
| Msa0433630 | Msa1352580 | 0.806577 | 7.687049e-50 | -8.615850e-47 |
| Msa0434660 | Msa1352580 | 0.815734 | 7.944498e-52 | -8.615850e-47 |
| Msa0436440 | Msa1352580 | 0.863974 | 1.696441e-64 | -8.615850e-47 |
| Msa0447870 | Msa1352580 | 0.814992 | 1.161412e-51 | -8.615850e-47 |
| Msa0480900 | Msa1352580 | -0.813994 | 1.930756e-51 | -8.615850e-47 |
| Msa0987670 | Msa1352580 | 0.843723 | 1.175468e-58 | -8.615850e-47 |
| Msa1021560 | Msa1352580 | 0.815478 | 9.059230e-52 | -8.615850e-47 |
| Msa1022420 | Msa1352580 | 0.800375 | 1.484725e-48 | -8.615850e-47 |
| Msa1025440 | Msa1352580 | -0.805479 | 1.308528e-49 | -8.615850e-47 |
| Msa1026710 | Msa1352580 | 0.802149 | 6.434761e-49 | -8.615850e-47 |
| Msa1033430 | Msa1352580 | 0.832327 | 1.006799e-55 | -8.615850e-47 |
| Msa1038860 | Msa1352580 | 0.960856 | 4.938949e-119 | -8.615850e-47 |
| Msa1039440 | Msa1352580 | -0.805533 | 1.275080e-49 | -8.615850e-47 |
| Msa1041060 | Msa1352580 | 0.805659 | 1.199740e-49 | -8.615850e-47 |
| Msa1073050 | Msa1352580 | 0.836609 | 8.465311e-57 | -8.615850e-47 |
| Msa1078590 | Msa1352580 | -0.805830 | 1.104736e-49 | -8.615850e-47 |
| Msa1078760 | Msa1352580 | -0.807579 | 4.717865e-50 | -8.615850e-47 |
| Msa1085560 | Msa1352580 | 0.804414 | 2.184929e-49 | -8.615850e-47 |
| Msa1093190 | Msa1352580 | -0.800077 | 1.706825e-48 | -8.615850e-47 |
| Msa1094810 | Msa1352580 | 0.823075 | 1.683355e-53 | -8.615850e-47 |
| Msa0240590 | Msa1352580 | -0.843967 | 1.011616e-58 | -8.615850e-47 |
| Msa0244820 | Msa1352580 | -0.816890 | 4.379177e-52 | -8.615850e-47 |
| Msa0260980 | Msa1352580 | 0.833805 | 4.319554e-56 | -8.615850e-47 |
| Msa0264890 | Msa1352580 | 0.813538 | 2.433595e-51 | -8.615850e-47 |
| Msa0266140 | Msa1352580 | -0.805884 | 1.076096e-49 | -8.615850e-47 |
| Msa0267450 | Msa1352580 | -0.819356 | 1.212258e-52 | -8.615850e-47 |
| Msa0267510 | Msa1352580 | -0.820611 | 6.259436e-53 | -8.615850e-47 |
| Msa0269220 | Msa1352580 | -0.847172 | 1.367807e-59 | -8.615850e-47 |
| Msa0270730 | Msa1352580 | -0.800181 | 1.625879e-48 | -8.615850e-47 |
| Msa0272790 | Msa1352580 | 0.806538 | 7.836917e-50 | -8.615850e-47 |
| Msa0276800 | Msa1352580 | -0.802001 | 6.900821e-49 | -8.615850e-47 |
| Msa0279090 | Msa1352580 | -0.842933 | 1.910507e-58 | -8.615850e-47 |
| Msa0279810 | Msa1352580 | 0.804797 | 1.818039e-49 | -8.615850e-47 |
| Msa0290800 | Msa1352580 | 0.801250 | 9.840547e-49 | -8.615850e-47 |
| Msa0300470 | Msa1352580 | 0.803935 | 2.749230e-49 | -8.615850e-47 |
| Msa0300670 | Msa1352580 | -0.816673 | 4.899501e-52 | -8.615850e-47 |
| Msa0304060 | Msa1352580 | -0.805412 | 1.351911e-49 | -8.615850e-47 |
| Msa0307430 | Msa1352580 | 0.838759 | 2.375836e-57 | -8.615850e-47 |
| Msa0308750 | Msa1352580 | 0.812336 | 4.463672e-51 | -8.615850e-47 |
| Msa0316740 | Msa1352580 | 0.809986 | 1.442437e-50 | -8.615850e-47 |
| Msa0336430 | Msa1352580 | 0.813383 | 2.631652e-51 | -8.615850e-47 |
| Msa0336460 | Msa1352580 | 0.835715 | 1.427729e-56 | -8.615850e-47 |
| Msa0336520 | Msa1352580 | 0.816841 | 4.490760e-52 | -8.615850e-47 |
| Msa0337760 | Msa1352580 | -0.821029 | 5.017030e-53 | -8.615850e-47 |
| Msa0337970 | Msa1352580 | 0.804611 | 1.987545e-49 | -8.615850e-47 |
| Msa0354970 | Msa1352580 | -0.821562 | 3.780744e-53 | -8.615850e-47 |
| Msa0355080 | Msa1352580 | -0.826277 | 2.962693e-54 | -8.615850e-47 |
| Msa0356640 | Msa1352580 | 0.841010 | 6.157180e-58 | -8.615850e-47 |
| Msa0364030 | Msa1352580 | -0.800227 | 1.591078e-48 | -8.615850e-47 |
| Msa1127200 | Msa1352580 | 0.823150 | 1.617076e-53 | -8.615850e-47 |
| Msa1128810 | Msa1352580 | 0.867107 | 1.746385e-65 | -8.615850e-47 |
| Msa1129880 | Msa1352580 | -0.805982 | 1.026005e-49 | -8.615850e-47 |
| Msa1130770 | Msa1352580 | 0.818930 | 1.516021e-52 | -8.615850e-47 |
| Msa1136890 | Msa1352580 | -0.809827 | 1.560701e-50 | -8.615850e-47 |
| Msa1136970 | Msa1352580 | -0.821151 | 4.701543e-53 | -8.615850e-47 |
| Msa1146980 | Msa1352580 | 0.835629 | 1.501674e-56 | -8.615850e-47 |
| Msa1148930 | Msa1352580 | 0.804320 | 2.286110e-49 | -8.615850e-47 |
| Msa1165460 | Msa1352580 | 0.831536 | 1.579413e-55 | -8.615850e-47 |
| Msa1169590 | Msa1352580 | -0.800917 | 1.151007e-48 | -8.615850e-47 |
| Msa1186670 | Msa1352580 | 0.808723 | 2.692446e-50 | -8.615850e-47 |
| Msa1190350 | Msa1352580 | -0.813225 | 2.850214e-51 | -8.615850e-47 |
| Msa1191530 | Msa1352580 | -0.804839 | 1.781840e-49 | -8.615850e-47 |
| Msa1192360 | Msa1352580 | 0.818045 | 2.405897e-52 | -8.615850e-47 |
| Msa1196210 | Msa1352580 | -0.809812 | 1.572455e-50 | -8.615850e-47 |
| Msa1197720 | Msa1352580 | 0.856610 | 2.863455e-62 | -8.615850e-47 |
| Msa1200360 | Msa1352580 | 0.816478 | 5.416291e-52 | -8.615850e-47 |
| Msa1205270 | Msa1352580 | -0.820735 | 5.862895e-53 | -8.615850e-47 |
| Msa1217890 | Msa1352580 | 0.822220 | 2.661817e-53 | -8.615850e-47 |
| Msa1220580 | Msa1352580 | 0.800846 | 1.189911e-48 | -8.615850e-47 |
| Msa1220720 | Msa1352580 | 0.818373 | 2.028156e-52 | -8.615850e-47 |
| Msa0495620 | Msa1352580 | 0.839591 | 1.445730e-57 | -8.615850e-47 |
| Msa0513580 | Msa1352580 | -0.804969 | 1.673802e-49 | -8.615850e-47 |
| Msa0515760 | Msa1352580 | 0.807617 | 4.632202e-50 | -8.615850e-47 |
| Msa0521060 | Msa1352580 | 0.808734 | 2.677721e-50 | -8.615850e-47 |
| Msa0521510 | Msa1352580 | 0.820554 | 6.450329e-53 | -8.615850e-47 |
| Msa0522540 | Msa1352580 | 0.827101 | 1.884395e-54 | -8.615850e-47 |
| Msa0526150 | Msa1352580 | 0.880472 | 5.337277e-70 | -8.615850e-47 |
| Msa0526490 | Msa1352580 | -0.800246 | 1.576645e-48 | -8.615850e-47 |
| Msa0526500 | Msa1352580 | -0.828469 | 8.837120e-55 | -8.615850e-47 |
| Msa0530660 | Msa1352580 | 0.802622 | 5.140076e-49 | -8.615850e-47 |
| Msa0541880 | Msa1352580 | 0.845394 | 4.174026e-59 | -8.615850e-47 |
| Msa0541940 | Msa1352580 | 0.837501 | 5.008543e-57 | -8.615850e-47 |
| Msa0549870 | Msa1352580 | 0.842855 | 2.004147e-58 | -8.615850e-47 |
| Msa0566460 | Msa1352580 | 0.818083 | 2.358930e-52 | -8.615850e-47 |
| Msa0567330 | Msa1352580 | 0.815360 | 9.621801e-52 | -8.615850e-47 |
| Msa0569980 | Msa1352580 | -0.824076 | 9.817672e-54 | -8.615850e-47 |
| Msa0572360 | Msa1352580 | 0.871803 | 5.173218e-67 | -8.615850e-47 |
| Msa0575950 | Msa1352580 | 0.821074 | 4.898113e-53 | -8.615850e-47 |
| Msa0576320 | Msa1352580 | 0.810854 | 9.373044e-51 | -8.615850e-47 |
| Msa0579080 | Msa1352580 | 0.814779 | 1.294656e-51 | -8.615850e-47 |
| Msa0579160 | Msa1352580 | 0.804548 | 2.048724e-49 | -8.615850e-47 |
| Msa0579220 | Msa1352580 | 0.808937 | 2.422455e-50 | -8.615850e-47 |
| Msa0587180 | Msa1352580 | 0.834425 | 3.019451e-56 | -8.615850e-47 |
| Msa0590620 | Msa1352580 | -0.811020 | 8.625809e-51 | -8.615850e-47 |
| Msa0848670 | Msa1352580 | -0.820658 | 6.106701e-53 | -8.615850e-47 |
| Msa0852090 | Msa1352580 | -0.811872 | 5.632931e-51 | -8.615850e-47 |
| Msa0870020 | Msa1352580 | 0.825764 | 3.924053e-54 | -8.615850e-47 |
| Msa0871420 | Msa1352580 | 0.804392 | 2.208859e-49 | -8.615850e-47 |
| Msa0876630 | Msa1352580 | 0.805500 | 1.295382e-49 | -8.615850e-47 |
| Msa0880910 | Msa1352580 | 0.806941 | 6.442175e-50 | -8.615850e-47 |
| Msa0900830 | Msa1352580 | 0.816618 | 5.039292e-52 | -8.615850e-47 |
| Msa0904590 | Msa1352580 | 0.801643 | 8.173659e-49 | -8.615850e-47 |
| Msa0909260 | Msa1352580 | 0.825443 | 4.675746e-54 | -8.615850e-47 |
| Msa0921860 | Msa1352580 | 0.811082 | 8.363674e-51 | -8.615850e-47 |
| Msa0936630 | Msa1352580 | 0.815187 | 1.051112e-51 | -8.615850e-47 |
| Msa0941150 | Msa1352580 | -0.811128 | 8.174676e-51 | -8.615850e-47 |
| Msa0967070 | Msa1352580 | 0.806456 | 8.154772e-50 | -8.615850e-47 |
| Msa0967780 | Msa1352580 | 0.804859 | 1.764122e-49 | -8.615850e-47 |
| Msa0970040 | Msa1352580 | 0.810840 | 9.438127e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1352580 | MtrunA17_Chr7g0273321 | 94.702 | 151 | 4 | 1 | 1 | 151 | 1 | 147 | 3.88e-101 | 286 |
| Msa1352580 | MtrunA17_Chr1g0191351 | 65.517 | 145 | 49 | 1 | 1 | 145 | 1 | 144 | 4.91e-67 | 200 |
| Msa1352580 | MtrunA17_Chr2g0286781 | 61.224 | 147 | 56 | 1 | 4 | 150 | 3 | 148 | 1.06e-56 | 174 |
| Msa1352580 | MtrunA17_Chr1g0196361 | 50.350 | 143 | 70 | 1 | 6 | 148 | 3 | 144 | 5.08e-52 | 162 |
| Msa1352580 | MtrunA17_Chr2g0331021 | 44.030 | 134 | 74 | 1 | 8 | 141 | 7 | 139 | 7.25e-39 | 129 |
| Msa1352580 | MtrunA17_Chr2g0331011 | 44.030 | 134 | 74 | 1 | 8 | 141 | 7 | 139 | 9.72e-39 | 128 |
| Msa1352580 | MtrunA17_Chr2g0333131 | 44.776 | 134 | 73 | 1 | 18 | 150 | 20 | 153 | 3.05e-30 | 107 |
| Msa1352580 | MtrunA17_Chr4g0003251 | 46.324 | 136 | 72 | 1 | 16 | 150 | 6 | 141 | 1.37e-27 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1352580 | AT1G03430.1 | 54.730 | 148 | 67 | 0 | 4 | 151 | 6 | 153 | 5.22e-57 | 175 |
| Msa1352580 | AT5G39340.1 | 52.027 | 148 | 71 | 0 | 4 | 151 | 5 | 152 | 9.02e-55 | 169 |
| Msa1352580 | AT5G39340.4 | 52.027 | 148 | 71 | 0 | 4 | 151 | 38 | 185 | 3.28e-54 | 169 |
| Msa1352580 | AT3G29350.1 | 51.351 | 148 | 72 | 0 | 4 | 151 | 5 | 152 | 4.91e-54 | 167 |
| Msa1352580 | AT5G39340.2 | 52.027 | 148 | 71 | 0 | 4 | 151 | 54 | 201 | 7.85e-54 | 169 |
| Msa1352580 | AT5G39340.3 | 52.027 | 148 | 71 | 0 | 4 | 151 | 54 | 201 | 7.85e-54 | 169 |
| Msa1352580 | AT3G21510.1 | 58.503 | 147 | 60 | 1 | 4 | 150 | 3 | 148 | 2.62e-53 | 166 |
| Msa1352580 | AT1G03430.2 | 54.676 | 139 | 63 | 0 | 4 | 142 | 6 | 144 | 7.18e-51 | 160 |
| Msa1352580 | AT3G29350.2 | 55.455 | 110 | 49 | 0 | 4 | 113 | 5 | 114 | 1.00e-41 | 135 |
| Msa1352580 | AT3G16360.2 | 41.481 | 135 | 78 | 1 | 7 | 141 | 1 | 134 | 1.03e-38 | 129 |
| Msa1352580 | AT3G16360.1 | 41.667 | 120 | 69 | 1 | 21 | 140 | 9 | 127 | 1.38e-34 | 117 |
| Msa1352580 | AT1G80100.1 | 42.282 | 149 | 85 | 1 | 3 | 150 | 5 | 153 | 4.57e-24 | 91.7 |
| Msa1352580 | AT1G80100.3 | 41.176 | 136 | 80 | 0 | 3 | 138 | 5 | 140 | 5.73e-20 | 81.3 |
| Msa1352580 | AT4G04402.1 | 31.915 | 141 | 82 | 4 | 22 | 150 | 24 | 162 | 2.05e-18 | 77.4 |
| Msa1352580 | AT1G80100.2 | 38.255 | 149 | 69 | 3 | 3 | 150 | 5 | 131 | 1.52e-17 | 74.3 |
Find 47 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTGCTCCTTTGGTTAAAA+TGG | 0.107254 | tig0012617:+23735 | Msa1352580:three_prime_UTR |
| TTCAAACCAATTGAGAATTT+AGG | 0.240785 | tig0012617:-23639 | None:intergenic |
| CTGAATAACCCCTGCTCCTT+TGG | 0.270701 | tig0012617:+23726 | Msa1352580:three_prime_UTR |
| ACTATGCTTGGATAGAGATT+TGG | 0.335146 | tig0012617:-22321 | None:intergenic |
| TGGCTGCTTTGTATGCAAAT+TGG | 0.347766 | tig0012617:-23576 | None:intergenic |
| CAATTTGCAATTACTATGCT+TGG | 0.356276 | tig0012617:-22333 | None:intergenic |
| TTATCTTATTATAGATCATC+AGG | 0.357517 | tig0012617:+23846 | Msa1352580:three_prime_UTR |
| ACTTGTAGTGCCATCTTCAT+TGG | 0.367493 | tig0012617:-23815 | None:intergenic |
| TCAGTGCTACTCAATATCTT+AGG | 0.393453 | tig0012617:-22405 | None:intergenic |
| AGAGAAGCTTCTTAATCAAT+TGG | 0.405079 | tig0012617:+22688 | Msa1352580:CDS |
| TCCAGTCCTAAATTCTCAAT+TGG | 0.416974 | tig0012617:+23633 | Msa1352580:three_prime_UTR |
| CTTGAAGAGTGTCTCAAACT+TGG | 0.419955 | tig0012617:-23373 | None:intergenic |
| TTTATCTTTGCCAATGAAGA+TGG | 0.421249 | tig0012617:+23805 | Msa1352580:three_prime_UTR |
| AGTGGTCACTCTCTTCTTTG+AGG | 0.421547 | tig0012617:+22661 | Msa1352580:CDS |
| CCTTTGGTTAAAATGGAAGT+TGG | 0.423625 | tig0012617:+23742 | Msa1352580:three_prime_UTR |
| ACCACTTCAACAACAAAGTC+AGG | 0.424359 | tig0012617:-22644 | None:intergenic |
| CAAGTTTGAGACACTCTTCA+AGG | 0.437960 | tig0012617:+23374 | Msa1352580:CDS |
| TATCTTAGGAGGTATTCATT+TGG | 0.439660 | tig0012617:-22391 | None:intergenic |
| GCTGGTTAAATTGATCATCT+AGG | 0.442108 | tig0012617:-22595 | None:intergenic |
| TCCCTTATCATTCACTATCT+AGG | 0.448382 | tig0012617:-23533 | None:intergenic |
| GATTAGTATTCTTGAACAAC+CGG | 0.448984 | tig0012617:-23780 | None:intergenic |
| TTGGAATGTTTGATCTCTAC+CGG | 0.464830 | tig0012617:+23761 | Msa1352580:three_prime_UTR |
| CTCCTAGATAGTGAATGATA+AGG | 0.467785 | tig0012617:+23531 | Msa1352580:exon |
| CATCTTGAAGTAGTTGAAGC+TGG | 0.469279 | tig0012617:-22613 | None:intergenic |
| TGGAGCTGCTGCCTTTCAGC+TGG | 0.470844 | tig0012617:-22876 | None:intergenic |
| AGCTGAAAGGCAGCAGCTCC+AGG | 0.471527 | tig0012617:+22878 | Msa1352580:CDS |
| CCCTGACTTTGTTGTTGAAG+TGG | 0.477305 | tig0012617:+22643 | Msa1352580:CDS |
| CTTAGGAGGTATTCATTTGG+TGG | 0.477590 | tig0012617:-22388 | None:intergenic |
| GATATGGATGGATCACTGTC+TGG | 0.490786 | tig0012617:-23682 | None:intergenic |
| TAAATGTTACCTCTTGAAAG+AGG | 0.497593 | tig0012617:-22493 | None:intergenic |
| TCCTAGATAGTGAATGATAA+GGG | 0.511302 | tig0012617:+23532 | Msa1352580:exon |
| ATTAATCCCAAGCAGAGGCC+AGG | 0.527313 | tig0012617:+22813 | Msa1352580:intron |
| AAATCAAAACATGAGAAAAG+TGG | 0.529090 | tig0012617:-23596 | None:intergenic |
| GTACAATATATGGATATGGA+TGG | 0.539041 | tig0012617:-23694 | None:intergenic |
| TTAAAAGTTATCCACACAAG+AGG | 0.542011 | tig0012617:+22297 | None:intergenic |
| CAATTCTTCCCTCTTTCAAG+AGG | 0.543757 | tig0012617:+22484 | Msa1352580:CDS |
| ACCAATTGAGAATTTAGGAC+TGG | 0.547961 | tig0012617:-23634 | None:intergenic |
| AGAGATTTGGCCCTCTTGTG+TGG | 0.561039 | tig0012617:-22308 | None:intergenic |
| GGCTCAGTTGCAAAGACAGT+TGG | 0.573415 | tig0012617:+22454 | Msa1352580:CDS |
| GTGCTACTCAATATCTTAGG+AGG | 0.577462 | tig0012617:-22402 | None:intergenic |
| TATCTTATTATAGATCATCA+GGG | 0.580540 | tig0012617:+23847 | Msa1352580:three_prime_UTR |
| GCTCTTGTTCACCAGCTGAA+AGG | 0.590228 | tig0012617:+22865 | Msa1352580:CDS |
| AAATGTTACCTCTTGAAAGA+GGG | 0.594954 | tig0012617:-22492 | None:intergenic |
| AAGCTTGCAAGACATAAAGC+AGG | 0.597078 | tig0012617:+23332 | Msa1352580:CDS |
| GAGAACAACAATGTATAGTG+TGG | 0.639598 | tig0012617:+22433 | Msa1352580:exon |
| TAAAAGTTATCCACACAAGA+GGG | 0.650001 | tig0012617:+22298 | None:intergenic |
| CCACTTCAACAACAAAGTCA+GGG | 0.677112 | tig0012617:-22643 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTCTTTATTTTATGTATA+GGG | + | tig0012617:22748-22767 | Msa1352580:intron | 10.0% |
| !!! | AAAATAACATTGATTTTAAA+AGG | + | tig0012617:22836-22855 | Msa1352580:CDS | 10.0% |
| !!! | AAATAACATTGATTTTAAAA+GGG | + | tig0012617:22837-22856 | Msa1352580:CDS | 10.0% |
| !! | TAATTTAATACATATATGAA+GGG | - | tig0012617:23415-23434 | None:intergenic | 10.0% |
| !! | TTAATTTAATACATATATGA+AGG | - | tig0012617:23416-23435 | None:intergenic | 10.0% |
| !!! | TTTTCTTTATTTTATGTATA+GGG | + | tig0012617:22748-22767 | Msa1352580:intron | 10.0% |
| !!! | AAAATAACATTGATTTTAAA+AGG | + | tig0012617:22836-22855 | Msa1352580:CDS | 10.0% |
| !!! | AAATAACATTGATTTTAAAA+GGG | + | tig0012617:22837-22856 | Msa1352580:CDS | 10.0% |
| !! | TAATTTAATACATATATGAA+GGG | - | tig0012617:23415-23434 | None:intergenic | 10.0% |
| !! | TTAATTTAATACATATATGA+AGG | - | tig0012617:23416-23435 | None:intergenic | 10.0% |
| !!! | CTTTTCTTTATTTTATGTAT+AGG | + | tig0012617:22747-22766 | Msa1352580:intron | 15.0% |
| !! | TATAGAATTATACATTACTT+TGG | - | tig0012617:22775-22794 | None:intergenic | 15.0% |
| !!! | AGAAAAAATATACATGTTTT+TGG | + | tig0012617:23293-23312 | Msa1352580:intron | 15.0% |
| !!! | AATTAATCTTATCATTTTGA+GGG | + | tig0012617:23901-23920 | Msa1352580:three_prime_UTR | 15.0% |
| !!! | CTTTTCTTTATTTTATGTAT+AGG | + | tig0012617:22747-22766 | Msa1352580:intron | 15.0% |
| !! | TATAGAATTATACATTACTT+TGG | - | tig0012617:22775-22794 | None:intergenic | 15.0% |
| !!! | AGAAAAAATATACATGTTTT+TGG | + | tig0012617:23293-23312 | Msa1352580:intron | 15.0% |
| !!! | AATTAATCTTATCATTTTGA+GGG | + | tig0012617:23901-23920 | Msa1352580:three_prime_UTR | 15.0% |
| !! | AAGAAAAGATAGAAAGAAAA+TGG | - | tig0012617:22544-22563 | None:intergenic | 20.0% |
| !!! | TAAAATCAATGTTATTTTCC+TGG | - | tig0012617:22834-22853 | None:intergenic | 20.0% |
| !!! | TACTTTCTTATCTTGTTTTA+AGG | - | tig0012617:23059-23078 | None:intergenic | 20.0% |
| !!! | CAACTTGTATAATTTTGATA+AGG | + | tig0012617:23097-23116 | Msa1352580:intron | 20.0% |
| !!! | TTTTGTACAATATATGGATA+TGG | - | tig0012617:23701-23720 | None:intergenic | 20.0% |
| !!! | GTTTTCTTTTGTACAATATA+TGG | - | tig0012617:23707-23726 | None:intergenic | 20.0% |
| !! | TTATCTTATTATAGATCATC+AGG | + | tig0012617:23846-23865 | Msa1352580:three_prime_UTR | 20.0% |
| !! | TATCTTATTATAGATCATCA+GGG | + | tig0012617:23847-23866 | Msa1352580:three_prime_UTR | 20.0% |
| !!! | GAATTAATCTTATCATTTTG+AGG | + | tig0012617:23900-23919 | Msa1352580:three_prime_UTR | 20.0% |
| !!! | ATTAATCTTATCATTTTGAG+GGG | + | tig0012617:23902-23921 | Msa1352580:three_prime_UTR | 20.0% |
| !! | AAGAAAAGATAGAAAGAAAA+TGG | - | tig0012617:22544-22563 | None:intergenic | 20.0% |
| !!! | TAAAATCAATGTTATTTTCC+TGG | - | tig0012617:22834-22853 | None:intergenic | 20.0% |
| !!! | TACTTTCTTATCTTGTTTTA+AGG | - | tig0012617:23059-23078 | None:intergenic | 20.0% |
| !!! | CAACTTGTATAATTTTGATA+AGG | + | tig0012617:23097-23116 | Msa1352580:intron | 20.0% |
| !!! | TTTTGTACAATATATGGATA+TGG | - | tig0012617:23701-23720 | None:intergenic | 20.0% |
| !!! | GTTTTCTTTTGTACAATATA+TGG | - | tig0012617:23707-23726 | None:intergenic | 20.0% |
| !! | TTATCTTATTATAGATCATC+AGG | + | tig0012617:23846-23865 | Msa1352580:three_prime_UTR | 20.0% |
| !! | TATCTTATTATAGATCATCA+GGG | + | tig0012617:23847-23866 | Msa1352580:three_prime_UTR | 20.0% |
| !!! | GAATTAATCTTATCATTTTG+AGG | + | tig0012617:23900-23919 | Msa1352580:three_prime_UTR | 20.0% |
| !!! | ATTAATCTTATCATTTTGAG+GGG | + | tig0012617:23902-23921 | Msa1352580:three_prime_UTR | 20.0% |
| !! | TCTATCTTTTCTTTCATTTG+TGG | + | tig0012617:22551-22570 | Msa1352580:intron | 25.0% |
| ! | CAATTGGAAAAAGAAATGTA+AGG | + | tig0012617:22704-22723 | Msa1352580:intron | 25.0% |
| !!! | TAACATTGATTTTAAAAGGG+TGG | + | tig0012617:22840-22859 | Msa1352580:CDS | 25.0% |
| ! | CAAAAGTTCAATATATTACC+TGG | - | tig0012617:22899-22918 | None:intergenic | 25.0% |
| !! | CTTATCTTATTTCAAGAACA+AGG | - | tig0012617:23001-23020 | None:intergenic | 25.0% |
| ! | AAATCAAAACATGAGAAAAG+TGG | - | tig0012617:23599-23618 | None:intergenic | 25.0% |
| ! | TTCAAACCAATTGAGAATTT+AGG | - | tig0012617:23642-23661 | None:intergenic | 25.0% |
| !! | TCTATCTTTTCTTTCATTTG+TGG | + | tig0012617:22551-22570 | Msa1352580:intron | 25.0% |
| ! | CAATTGGAAAAAGAAATGTA+AGG | + | tig0012617:22704-22723 | Msa1352580:intron | 25.0% |
| !!! | TAACATTGATTTTAAAAGGG+TGG | + | tig0012617:22840-22859 | Msa1352580:CDS | 25.0% |
| ! | CAAAAGTTCAATATATTACC+TGG | - | tig0012617:22899-22918 | None:intergenic | 25.0% |
| !! | CTTATCTTATTTCAAGAACA+AGG | - | tig0012617:23001-23020 | None:intergenic | 25.0% |
| ! | AAATCAAAACATGAGAAAAG+TGG | - | tig0012617:23599-23618 | None:intergenic | 25.0% |
| ! | TTCAAACCAATTGAGAATTT+AGG | - | tig0012617:23642-23661 | None:intergenic | 25.0% |
| CAATTTGCAATTACTATGCT+TGG | - | tig0012617:22336-22355 | None:intergenic | 30.0% | |
| !! | TATCTTAGGAGGTATTCATT+TGG | - | tig0012617:22394-22413 | None:intergenic | 30.0% |
| AAATGTTACCTCTTGAAAGA+GGG | - | tig0012617:22495-22514 | None:intergenic | 30.0% | |
| TAAATGTTACCTCTTGAAAG+AGG | - | tig0012617:22496-22515 | None:intergenic | 30.0% | |
| ! | TTGTGGTGATATCTTTGAAA+AGG | + | tig0012617:22568-22587 | Msa1352580:intron | 30.0% |
| ! | TGTGGTGATATCTTTGAAAA+GGG | + | tig0012617:22569-22588 | Msa1352580:intron | 30.0% |
| AGAGAAGCTTCTTAATCAAT+TGG | + | tig0012617:22688-22707 | Msa1352580:CDS | 30.0% | |
| CTTATTTCAAGAACAAGGAA+AGG | - | tig0012617:22996-23015 | None:intergenic | 30.0% | |
| GTTATTGGAAAATACAGCAT+TGG | + | tig0012617:23127-23146 | Msa1352580:intron | 30.0% | |
| !!! | TATACATGTTTTTGGCATTC+AGG | + | tig0012617:23301-23320 | Msa1352580:intron | 30.0% |
| TCCTAGATAGTGAATGATAA+GGG | + | tig0012617:23532-23551 | Msa1352580:exon | 30.0% | |
| GTACAATATATGGATATGGA+TGG | - | tig0012617:23697-23716 | None:intergenic | 30.0% | |
| GATTAGTATTCTTGAACAAC+CGG | - | tig0012617:23783-23802 | None:intergenic | 30.0% | |
| TTTATCTTTGCCAATGAAGA+TGG | + | tig0012617:23805-23824 | Msa1352580:three_prime_UTR | 30.0% | |
| CAATTTGCAATTACTATGCT+TGG | - | tig0012617:22336-22355 | None:intergenic | 30.0% | |
| !! | TATCTTAGGAGGTATTCATT+TGG | - | tig0012617:22394-22413 | None:intergenic | 30.0% |
| AAATGTTACCTCTTGAAAGA+GGG | - | tig0012617:22495-22514 | None:intergenic | 30.0% | |
| TAAATGTTACCTCTTGAAAG+AGG | - | tig0012617:22496-22515 | None:intergenic | 30.0% | |
| ! | TTGTGGTGATATCTTTGAAA+AGG | + | tig0012617:22568-22587 | Msa1352580:intron | 30.0% |
| ! | TGTGGTGATATCTTTGAAAA+GGG | + | tig0012617:22569-22588 | Msa1352580:intron | 30.0% |
| AGAGAAGCTTCTTAATCAAT+TGG | + | tig0012617:22688-22707 | Msa1352580:CDS | 30.0% | |
| CTTATTTCAAGAACAAGGAA+AGG | - | tig0012617:22996-23015 | None:intergenic | 30.0% | |
| GTTATTGGAAAATACAGCAT+TGG | + | tig0012617:23127-23146 | Msa1352580:intron | 30.0% | |
| !!! | TATACATGTTTTTGGCATTC+AGG | + | tig0012617:23301-23320 | Msa1352580:intron | 30.0% |
| TCCTAGATAGTGAATGATAA+GGG | + | tig0012617:23532-23551 | Msa1352580:exon | 30.0% | |
| GTACAATATATGGATATGGA+TGG | - | tig0012617:23697-23716 | None:intergenic | 30.0% | |
| GATTAGTATTCTTGAACAAC+CGG | - | tig0012617:23783-23802 | None:intergenic | 30.0% | |
| TTTATCTTTGCCAATGAAGA+TGG | + | tig0012617:23805-23824 | Msa1352580:three_prime_UTR | 30.0% | |
| ACTATGCTTGGATAGAGATT+TGG | - | tig0012617:22324-22343 | None:intergenic | 35.0% | |
| ! | TCAGTGCTACTCAATATCTT+AGG | - | tig0012617:22408-22427 | None:intergenic | 35.0% |
| GAGAACAACAATGTATAGTG+TGG | + | tig0012617:22433-22452 | Msa1352580:exon | 35.0% | |
| GCTGGTTAAATTGATCATCT+AGG | - | tig0012617:22598-22617 | None:intergenic | 35.0% | |
| TTCTAATTAATCCCAAGCAG+AGG | + | tig0012617:22808-22827 | Msa1352580:intron | 35.0% | |
| TTGATGTGATTAAGTCAACG+AGG | - | tig0012617:22937-22956 | None:intergenic | 35.0% | |
| TGATAAGGTCGTTGAGTTAT+TGG | + | tig0012617:23112-23131 | Msa1352580:intron | 35.0% | |
| TGTGAGGAGAAAAACATAGA+AGG | + | tig0012617:23193-23212 | Msa1352580:CDS | 35.0% | |
| GTGAGGAGAAAAACATAGAA+GGG | + | tig0012617:23194-23213 | Msa1352580:CDS | 35.0% | |
| !! | CTCAAACTTGGTTTTCACTA+AGG | - | tig0012617:23364-23383 | None:intergenic | 35.0% |
| TTTGCTTCTGTGATTGTAGA+TGG | + | tig0012617:23478-23497 | Msa1352580:intron | 35.0% | |
| CTCCTAGATAGTGAATGATA+AGG | + | tig0012617:23531-23550 | Msa1352580:exon | 35.0% | |
| TCCCTTATCATTCACTATCT+AGG | - | tig0012617:23536-23555 | None:intergenic | 35.0% | |
| TCCAGTCCTAAATTCTCAAT+TGG | + | tig0012617:23633-23652 | Msa1352580:three_prime_UTR | 35.0% | |
| ! | ACCAATTGAGAATTTAGGAC+TGG | - | tig0012617:23637-23656 | None:intergenic | 35.0% |
| !! | CCAACTTCCATTTTAACCAA+AGG | - | tig0012617:23745-23764 | None:intergenic | 35.0% |
| CCTTTGGTTAAAATGGAAGT+TGG | + | tig0012617:23742-23761 | Msa1352580:three_prime_UTR | 35.0% | |
| TTGGAATGTTTGATCTCTAC+CGG | + | tig0012617:23761-23780 | Msa1352580:three_prime_UTR | 35.0% | |
| ACTATGCTTGGATAGAGATT+TGG | - | tig0012617:22324-22343 | None:intergenic | 35.0% | |
| ! | TCAGTGCTACTCAATATCTT+AGG | - | tig0012617:22408-22427 | None:intergenic | 35.0% |
| GAGAACAACAATGTATAGTG+TGG | + | tig0012617:22433-22452 | Msa1352580:exon | 35.0% | |
| GCTGGTTAAATTGATCATCT+AGG | - | tig0012617:22598-22617 | None:intergenic | 35.0% | |
| TTCTAATTAATCCCAAGCAG+AGG | + | tig0012617:22808-22827 | Msa1352580:intron | 35.0% | |
| TTGATGTGATTAAGTCAACG+AGG | - | tig0012617:22937-22956 | None:intergenic | 35.0% | |
| TGATAAGGTCGTTGAGTTAT+TGG | + | tig0012617:23112-23131 | Msa1352580:intron | 35.0% | |
| TGTGAGGAGAAAAACATAGA+AGG | + | tig0012617:23193-23212 | Msa1352580:CDS | 35.0% | |
| GTGAGGAGAAAAACATAGAA+GGG | + | tig0012617:23194-23213 | Msa1352580:CDS | 35.0% | |
| !! | CTCAAACTTGGTTTTCACTA+AGG | - | tig0012617:23364-23383 | None:intergenic | 35.0% |
| TTTGCTTCTGTGATTGTAGA+TGG | + | tig0012617:23478-23497 | Msa1352580:intron | 35.0% | |
| CTCCTAGATAGTGAATGATA+AGG | + | tig0012617:23531-23550 | Msa1352580:exon | 35.0% | |
| TCCCTTATCATTCACTATCT+AGG | - | tig0012617:23536-23555 | None:intergenic | 35.0% | |
| TCCAGTCCTAAATTCTCAAT+TGG | + | tig0012617:23633-23652 | Msa1352580:three_prime_UTR | 35.0% | |
| ! | ACCAATTGAGAATTTAGGAC+TGG | - | tig0012617:23637-23656 | None:intergenic | 35.0% |
| !! | CCAACTTCCATTTTAACCAA+AGG | - | tig0012617:23745-23764 | None:intergenic | 35.0% |
| CCTTTGGTTAAAATGGAAGT+TGG | + | tig0012617:23742-23761 | Msa1352580:three_prime_UTR | 35.0% | |
| TTGGAATGTTTGATCTCTAC+CGG | + | tig0012617:23761-23780 | Msa1352580:three_prime_UTR | 35.0% | |
| !! | CTTAGGAGGTATTCATTTGG+TGG | - | tig0012617:22391-22410 | None:intergenic | 40.0% |
| ! | GTGCTACTCAATATCTTAGG+AGG | - | tig0012617:22405-22424 | None:intergenic | 40.0% |
| CAATTCTTCCCTCTTTCAAG+AGG | + | tig0012617:22484-22503 | Msa1352580:CDS | 40.0% | |
| CATCTTGAAGTAGTTGAAGC+TGG | - | tig0012617:22616-22635 | None:intergenic | 40.0% | |
| CCACTTCAACAACAAAGTCA+GGG | - | tig0012617:22646-22665 | None:intergenic | 40.0% | |
| ACCACTTCAACAACAAAGTC+AGG | - | tig0012617:22647-22666 | None:intergenic | 40.0% | |
| TGTGATTAAGTCAACGAGGT+CGG | - | tig0012617:22933-22952 | None:intergenic | 40.0% | |
| TGCCTTCAAAAACTACTGTG+AGG | + | tig0012617:23177-23196 | Msa1352580:CDS | 40.0% | |
| ! | CTCCTCACAGTAGTTTTTGA+AGG | - | tig0012617:23182-23201 | None:intergenic | 40.0% |
| AAGCTTGCAAGACATAAAGC+AGG | + | tig0012617:23332-23351 | Msa1352580:CDS | 40.0% | |
| !! | CTTGAAGAGTGTCTCAAACT+TGG | - | tig0012617:23376-23395 | None:intergenic | 40.0% |
| ! | CAAGTTTGAGACACTCTTCA+AGG | + | tig0012617:23374-23393 | Msa1352580:CDS | 40.0% |
| TTGAGACACTCTTCAAGGTA+AGG | + | tig0012617:23379-23398 | Msa1352580:intron | 40.0% | |
| ! | TGGCTGCTTTGTATGCAAAT+TGG | - | tig0012617:23579-23598 | None:intergenic | 40.0% |
| !! | CATTTTAACCAAAGGAGCAG+GGG | - | tig0012617:23737-23756 | None:intergenic | 40.0% |
| !! | CCATTTTAACCAAAGGAGCA+GGG | - | tig0012617:23738-23757 | None:intergenic | 40.0% |
| !! | TCCATTTTAACCAAAGGAGC+AGG | - | tig0012617:23739-23758 | None:intergenic | 40.0% |
| ACTTGTAGTGCCATCTTCAT+TGG | - | tig0012617:23818-23837 | None:intergenic | 40.0% | |
| !! | CTTAGGAGGTATTCATTTGG+TGG | - | tig0012617:22391-22410 | None:intergenic | 40.0% |
| ! | GTGCTACTCAATATCTTAGG+AGG | - | tig0012617:22405-22424 | None:intergenic | 40.0% |
| CAATTCTTCCCTCTTTCAAG+AGG | + | tig0012617:22484-22503 | Msa1352580:CDS | 40.0% | |
| CATCTTGAAGTAGTTGAAGC+TGG | - | tig0012617:22616-22635 | None:intergenic | 40.0% | |
| CCACTTCAACAACAAAGTCA+GGG | - | tig0012617:22646-22665 | None:intergenic | 40.0% | |
| ACCACTTCAACAACAAAGTC+AGG | - | tig0012617:22647-22666 | None:intergenic | 40.0% | |
| TGTGATTAAGTCAACGAGGT+CGG | - | tig0012617:22933-22952 | None:intergenic | 40.0% | |
| TGCCTTCAAAAACTACTGTG+AGG | + | tig0012617:23177-23196 | Msa1352580:CDS | 40.0% | |
| ! | CTCCTCACAGTAGTTTTTGA+AGG | - | tig0012617:23182-23201 | None:intergenic | 40.0% |
| AAGCTTGCAAGACATAAAGC+AGG | + | tig0012617:23332-23351 | Msa1352580:CDS | 40.0% | |
| !! | CTTGAAGAGTGTCTCAAACT+TGG | - | tig0012617:23376-23395 | None:intergenic | 40.0% |
| ! | CAAGTTTGAGACACTCTTCA+AGG | + | tig0012617:23374-23393 | Msa1352580:CDS | 40.0% |
| TTGAGACACTCTTCAAGGTA+AGG | + | tig0012617:23379-23398 | Msa1352580:intron | 40.0% | |
| ! | TGGCTGCTTTGTATGCAAAT+TGG | - | tig0012617:23579-23598 | None:intergenic | 40.0% |
| !! | CATTTTAACCAAAGGAGCAG+GGG | - | tig0012617:23737-23756 | None:intergenic | 40.0% |
| !! | CCATTTTAACCAAAGGAGCA+GGG | - | tig0012617:23738-23757 | None:intergenic | 40.0% |
| !! | TCCATTTTAACCAAAGGAGC+AGG | - | tig0012617:23739-23758 | None:intergenic | 40.0% |
| ACTTGTAGTGCCATCTTCAT+TGG | - | tig0012617:23818-23837 | None:intergenic | 40.0% | |
| !! | CCCTGACTTTGTTGTTGAAG+TGG | + | tig0012617:22643-22662 | Msa1352580:CDS | 45.0% |
| AGTGGTCACTCTCTTCTTTG+AGG | + | tig0012617:22661-22680 | Msa1352580:CDS | 45.0% | |
| ! | TATTTTCCTGGCCTCTGCTT+GGG | - | tig0012617:22822-22841 | None:intergenic | 45.0% |
| ! | TTATTTTCCTGGCCTCTGCT+TGG | - | tig0012617:22823-22842 | None:intergenic | 45.0% |
| ! | AGCAGCAACTTTTTGCTGCA+GGG | + | tig0012617:23501-23520 | Msa1352580:CDS | 45.0% |
| GATATGGATGGATCACTGTC+TGG | - | tig0012617:23685-23704 | None:intergenic | 45.0% | |
| CCCTGCTCCTTTGGTTAAAA+TGG | + | tig0012617:23735-23754 | Msa1352580:three_prime_UTR | 45.0% | |
| !! | CCCTGACTTTGTTGTTGAAG+TGG | + | tig0012617:22643-22662 | Msa1352580:CDS | 45.0% |
| AGTGGTCACTCTCTTCTTTG+AGG | + | tig0012617:22661-22680 | Msa1352580:CDS | 45.0% | |
| ! | TATTTTCCTGGCCTCTGCTT+GGG | - | tig0012617:22822-22841 | None:intergenic | 45.0% |
| ! | TTATTTTCCTGGCCTCTGCT+TGG | - | tig0012617:22823-22842 | None:intergenic | 45.0% |
| ! | AGCAGCAACTTTTTGCTGCA+GGG | + | tig0012617:23501-23520 | Msa1352580:CDS | 45.0% |
| GATATGGATGGATCACTGTC+TGG | - | tig0012617:23685-23704 | None:intergenic | 45.0% | |
| CCCTGCTCCTTTGGTTAAAA+TGG | + | tig0012617:23735-23754 | Msa1352580:three_prime_UTR | 45.0% | |
| AGAGATTTGGCCCTCTTGTG+TGG | - | tig0012617:22311-22330 | None:intergenic | 50.0% | |
| GGCTCAGTTGCAAAGACAGT+TGG | + | tig0012617:22454-22473 | Msa1352580:CDS | 50.0% | |
| ATTAATCCCAAGCAGAGGCC+AGG | + | tig0012617:22813-22832 | Msa1352580:intron | 50.0% | |
| GCTCTTGTTCACCAGCTGAA+AGG | + | tig0012617:22865-22884 | Msa1352580:CDS | 50.0% | |
| ! | GAGCAGCAACTTTTTGCTGC+AGG | + | tig0012617:23500-23519 | Msa1352580:CDS | 50.0% |
| ! | GCAGCAACTTTTTGCTGCAG+GGG | + | tig0012617:23502-23521 | Msa1352580:CDS | 50.0% |
| ! | CAGCAACTTTTTGCTGCAGG+GGG | + | tig0012617:23503-23522 | Msa1352580:CDS | 50.0% |
| ! | ACTTTTTGCTGCAGGGGGTT+CGG | + | tig0012617:23508-23527 | Msa1352580:CDS | 50.0% |
| CTGAATAACCCCTGCTCCTT+TGG | + | tig0012617:23726-23745 | Msa1352580:three_prime_UTR | 50.0% | |
| AGAGATTTGGCCCTCTTGTG+TGG | - | tig0012617:22311-22330 | None:intergenic | 50.0% | |
| GGCTCAGTTGCAAAGACAGT+TGG | + | tig0012617:22454-22473 | Msa1352580:CDS | 50.0% | |
| ATTAATCCCAAGCAGAGGCC+AGG | + | tig0012617:22813-22832 | Msa1352580:intron | 50.0% | |
| GCTCTTGTTCACCAGCTGAA+AGG | + | tig0012617:22865-22884 | Msa1352580:CDS | 50.0% | |
| ! | GAGCAGCAACTTTTTGCTGC+AGG | + | tig0012617:23500-23519 | Msa1352580:CDS | 50.0% |
| ! | GCAGCAACTTTTTGCTGCAG+GGG | + | tig0012617:23502-23521 | Msa1352580:CDS | 50.0% |
| ! | CAGCAACTTTTTGCTGCAGG+GGG | + | tig0012617:23503-23522 | Msa1352580:CDS | 50.0% |
| ! | ACTTTTTGCTGCAGGGGGTT+CGG | + | tig0012617:23508-23527 | Msa1352580:CDS | 50.0% |
| CTGAATAACCCCTGCTCCTT+TGG | + | tig0012617:23726-23745 | Msa1352580:three_prime_UTR | 50.0% | |
| TGGAGCTGCTGCCTTTCAGC+TGG | - | tig0012617:22879-22898 | None:intergenic | 60.0% | |
| AGCTGAAAGGCAGCAGCTCC+AGG | + | tig0012617:22878-22897 | Msa1352580:CDS | 60.0% | |
| TGGAGCTGCTGCCTTTCAGC+TGG | - | tig0012617:22879-22898 | None:intergenic | 60.0% | |
| AGCTGAAAGGCAGCAGCTCC+AGG | + | tig0012617:22878-22897 | Msa1352580:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0012617 | gene | 22301 | 23952 | 22301 | ID=Msa1352580;Name=Msa1352580 |
| tig0012617 | mRNA | 22301 | 23952 | 22301 | ID=Msa1352580-mRNA-1;Parent=Msa1352580;Name=Msa1352580-mRNA-1;_AED=0.04;_eAED=0.04;_QI=142|1|1|1|1|1|6|411|151 |
| tig0012617 | exon | 22301 | 22505 | 22301 | ID=Msa1352580-mRNA-1:exon:8211;Parent=Msa1352580-mRNA-1 |
| tig0012617 | exon | 22590 | 22720 | 22590 | ID=Msa1352580-mRNA-1:exon:8212;Parent=Msa1352580-mRNA-1 |
| tig0012617 | exon | 22828 | 22899 | 22828 | ID=Msa1352580-mRNA-1:exon:8213;Parent=Msa1352580-mRNA-1 |
| tig0012617 | exon | 23144 | 23215 | 23144 | ID=Msa1352580-mRNA-1:exon:8214;Parent=Msa1352580-mRNA-1 |
| tig0012617 | exon | 23323 | 23395 | 23323 | ID=Msa1352580-mRNA-1:exon:8215;Parent=Msa1352580-mRNA-1 |
| tig0012617 | exon | 23497 | 23952 | 23497 | ID=Msa1352580-mRNA-1:exon:8216;Parent=Msa1352580-mRNA-1 |
| tig0012617 | five_prime_UTR | 22301 | 22442 | 22301 | ID=Msa1352580-mRNA-1:five_prime_utr;Parent=Msa1352580-mRNA-1 |
| tig0012617 | CDS | 22443 | 22505 | 22443 | ID=Msa1352580-mRNA-1:cds;Parent=Msa1352580-mRNA-1 |
| tig0012617 | CDS | 22590 | 22720 | 22590 | ID=Msa1352580-mRNA-1:cds;Parent=Msa1352580-mRNA-1 |
| tig0012617 | CDS | 22828 | 22899 | 22828 | ID=Msa1352580-mRNA-1:cds;Parent=Msa1352580-mRNA-1 |
| tig0012617 | CDS | 23144 | 23215 | 23144 | ID=Msa1352580-mRNA-1:cds;Parent=Msa1352580-mRNA-1 |
| tig0012617 | CDS | 23323 | 23395 | 23323 | ID=Msa1352580-mRNA-1:cds;Parent=Msa1352580-mRNA-1 |
| tig0012617 | CDS | 23497 | 23541 | 23497 | ID=Msa1352580-mRNA-1:cds;Parent=Msa1352580-mRNA-1 |
| tig0012617 | three_prime_UTR | 23542 | 23952 | 23542 | ID=Msa1352580-mRNA-1:three_prime_utr;Parent=Msa1352580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
