AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0183380

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0183380 MtrunA17_Chr1g0211191 97.250 400 11 0 164 563 49 448 0.0 806
Msa0183380 MtrunA17_Chr8g0383661 51.400 607 206 18 1 561 1 564 1.56e-179 518
Msa0183380 MtrunA17_Chr3g0129451 60.280 428 131 8 161 559 192 609 1.12e-171 499
Msa0183380 MtrunA17_Chr7g0259641 23.485 264 174 8 148 403 556 799 1.57e-12 70.5
Msa0183380 MtrunA17_Chr7g0260761 24.066 241 163 8 171 403 570 798 1.20e-11 67.8
Msa0183380 MtrunA17_Chr6g0465751 29.801 151 88 3 196 345 36 169 2.35e-11 66.6
Msa0183380 MtrunA17_Chr4g0044541 26.036 169 106 3 186 352 35 186 5.17e-11 65.5
Msa0183380 MtrunA17_Chr1g0153181 25.146 171 110 2 176 345 23 176 5.27e-11 65.5
Msa0183380 MtrunA17_Chr1g0153871 28.333 180 119 6 186 362 191 363 6.66e-11 64.7
Msa0183380 MtrunA17_Chr4g0074711 29.121 182 117 7 186 362 168 342 8.91e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0183380 AT2G16940.1 55.479 584 214 11 1 563 1 559 0.0 538
Msa0183380 AT2G16940.2 54.006 624 210 13 1 563 1 608 0.0 536
Msa0183380 AT2G16940.3 54.369 618 206 15 1 563 1 597 0.0 532
Msa0183380 AT2G16940.5 68.949 409 108 6 164 563 20 418 0.0 527
Msa0183380 AT2G16940.4 68.949 409 108 6 164 563 20 418 0.0 527
Msa0183380 AT5G09880.1 52.500 560 224 12 1 556 1 522 4.60e-167 485
Msa0183380 AT4G27000.1 30.435 184 120 4 181 362 169 346 4.10e-14 75.1
Msa0183380 AT1G48920.1 29.609 179 114 6 185 356 297 470 1.43e-13 73.9
Msa0183380 AT5G54900.1 26.562 192 134 3 173 362 142 328 2.11e-13 72.4
Msa0183380 AT4G34110.1 28.994 169 101 3 186 352 37 188 7.76e-13 71.6
Msa0183380 AT4G19610.1 24.123 228 156 5 177 397 593 810 2.93e-12 70.1
Msa0183380 AT4G26650.2 29.341 167 112 4 175 336 2 167 6.16e-11 65.1
Msa0183380 AT4G26650.1 29.341 167 112 4 175 336 5 170 6.67e-11 65.1
Msa0183380 AT1G11650.2 25.140 179 127 3 186 362 156 329 9.38e-11 64.3

Find 182 sgRNAs with CRISPR-Local

Find 719 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAAATTTAGGCCCTTATTC+TGG 0.109164 1_4:+72278577 Msa0183380:CDS
AATGATCACTGCAAGCTTTA+TGG 0.131084 1_4:+72283039 Msa0183380:CDS
CAGCGAAGCAAAAGCATTTC+TGG 0.156469 1_4:+72273727 Msa0183380:CDS
TTGCCATACTTCACCTGTTT+TGG 0.165706 1_4:+72283387 Msa0183380:three_prime_UTR
AATGAAATATTCGAATTAAT+TGG 0.166060 1_4:-72273327 None:intergenic
AAGAACTGTGTTTGCTTATC+AGG 0.185609 1_4:+72276656 Msa0183380:CDS
ACAGTTCTTTGATCTCTTTC+AGG 0.242899 1_4:-72276642 None:intergenic
GCGAGATGTTCGGTTGATTA+TGG 0.243482 1_4:+72277270 Msa0183380:CDS
ATGACTTATAAGAAGTTAAA+AGG 0.246950 1_4:+72283343 Msa0183380:three_prime_UTR
CGCTATTTAGTTAGTTAGTT+AGG 0.249316 1_4:-72273185 None:intergenic
TTCCCATTGCTTGTAGATTA+AGG 0.251379 1_4:-72282516 None:intergenic
CCAAGAACTCATTTGCTATC+TGG 0.252789 1_4:-72283187 None:intergenic
TTCGTTACCATGGCACTTAT+TGG 0.263565 1_4:-72273117 None:intergenic
CTTTCAGGTCAACCTCTTCT+TGG 0.289755 1_4:+72278475 Msa0183380:CDS
TTGCAGTATGGTTGGTTTGC+TGG 0.290107 1_4:+72282468 Msa0183380:intron
GGAATCGATCCTCGTATAAC+TGG 0.293028 1_4:-72283165 None:intergenic
CCAGATAGCAAATGAGTTCT+TGG 0.294565 1_4:+72283187 Msa0183380:exon
GAAGCAGAATGCTCCAAGTT+TGG 0.294926 1_4:+72282815 Msa0183380:CDS
ATTGGGCATTGCAAAGGTTT+TGG 0.296396 1_4:+72278966 Msa0183380:CDS
CCCATGGCAATAGCGCTTTC+AGG 0.304225 1_4:+72278460 Msa0183380:CDS
TATTAGTTTGCAGGGGTATT+GGG 0.308807 1_4:+72283424 Msa0183380:three_prime_UTR
GAAATTTAGGCCCTTATTCT+GGG 0.320135 1_4:+72278578 Msa0183380:CDS
AGGAATGGCAAGGGACTTAA+AGG 0.323597 1_4:+72273810 Msa0183380:CDS
GGTTCAACATAGAAGTTCTA+AGG 0.324971 1_4:+72273570 Msa0183380:CDS
GTTTAACTTAGTTAGTCTTT+TGG 0.326486 1_4:+72273007 Msa0183380:five_prime_UTR
ACCATGGCACTTATTGGAAT+TGG 0.327748 1_4:-72273111 None:intergenic
TCTGTTGCTAACGGGCCTTC+TGG 0.328512 1_4:+72278556 Msa0183380:CDS
CCACCTGGCATTCCAACTCC+TGG 0.330402 1_4:-72282568 None:intergenic
CAGACGGCATAAAGAGAAAA+AGG 0.339356 1_4:+72276593 Msa0183380:intron
GAAGGAACTAGACTTTGATT+TGG 0.341411 1_4:+72282775 Msa0183380:intron
ATCATTCCACTACTTGATAA+TGG 0.346454 1_4:-72283214 None:intergenic
TTATTAGTTTGCAGGGGTAT+TGG 0.347532 1_4:+72283423 Msa0183380:three_prime_UTR
GTTTAGGTGTTTGAAGCATT+TGG 0.350751 1_4:+72278909 Msa0183380:intron
AAGCAGAATGCTCCAAGTTT+GGG 0.375980 1_4:+72282816 Msa0183380:CDS
CAAGAATTCGGCGGAAATAC+TGG 0.377273 1_4:+72281160 Msa0183380:CDS
GAAAGAGATAGAAGGAATCA+AGG 0.379739 1_4:+72273673 Msa0183380:CDS
AACGGGCCTTCTGGAAATTT+AGG 0.380199 1_4:+72278565 Msa0183380:CDS
AAGATCAGCTTCAGTAATAC+TGG 0.384484 1_4:-72278635 None:intergenic
GTTCTTCTCGTCGTCGTTCA+CGG 0.386174 1_4:+72273524 Msa0183380:CDS
CTGTGCACTTATTGCAGATT+GGG 0.394110 1_4:-72282984 None:intergenic
CAGATAGCAAATGAGTTCTT+GGG 0.394573 1_4:+72283188 Msa0183380:exon
CAAGAACTCATTTGCTATCT+GGG 0.400356 1_4:-72283186 None:intergenic
TCCGATGGCTTCACCATCAC+TGG 0.400948 1_4:-72278502 None:intergenic
TTATCAAGTAGTGGAATGAT+AGG 0.404159 1_4:+72283217 Msa0183380:three_prime_UTR
TTACATGGAAGATGGTTTGC+AGG 0.407022 1_4:+72283013 Msa0183380:CDS
TGCTCGGGAAGAGGCATTCA+AGG 0.409408 1_4:-72282335 None:intergenic
GTTAAAGAATATGTTTGATC+CGG 0.411016 1_4:+72282660 Msa0183380:CDS
TGCAGTATGGTTGGTTTGCT+GGG 0.416126 1_4:+72282469 Msa0183380:intron
TTGAATAGCCAGTTGGAGAT+TGG 0.425004 1_4:+72279719 Msa0183380:CDS
CACCTGGCATTCCAACTCCT+GGG 0.427701 1_4:-72282567 None:intergenic
ATGGGGATAGGAAGAGAGAC+AGG 0.428494 1_4:+72273596 Msa0183380:CDS
ATAGAAGTTCTAAGGGCAAT+GGG 0.429828 1_4:+72273578 Msa0183380:CDS
GCTATTTAGTTAGTTAGTTA+GGG 0.433648 1_4:-72273184 None:intergenic
ACGGTGAAGAGAAGCATAGA+AGG 0.435659 1_4:+72273626 Msa0183380:CDS
TCTCTTTCAGGATCAATCTC+AGG 0.446666 1_4:-72276630 None:intergenic
ACCCCAGGAGTTGGAATGCC+AGG 0.447356 1_4:+72282565 Msa0183380:CDS
TTCTATCTCTTTCAACATCC+CGG 0.447920 1_4:-72273663 None:intergenic
CAATGTCATCAAGAGGCATC+TGG 0.449507 1_4:-72278947 None:intergenic
ATTTCCAGGTGCGAGATGTT+CGG 0.451143 1_4:+72277260 Msa0183380:intron
TCAAGACGTTCTAAAGGTGT+TGG 0.457560 1_4:+72277301 Msa0183380:CDS
GTAAATAGAGATGGAGAAAG+AGG 0.459538 1_4:+72273790 Msa0183380:CDS
AGATGCCTCTTGATGACATT+GGG 0.460702 1_4:+72278949 Msa0183380:CDS
TCCTCCCACCAATCTCCAAC+TGG 0.461997 1_4:-72279727 None:intergenic
AATTCTGTTGTCAACAATAC+AGG 0.465091 1_4:+72282493 Msa0183380:CDS
ATAGAGAGATGAGTCGTGAC+AGG 0.465228 1_4:+72273767 Msa0183380:CDS
GACTTGTCAGCATTTGAACT+TGG 0.465269 1_4:-72282597 None:intergenic
GCTGTGCACTTATTGCAGAT+TGG 0.469463 1_4:-72282985 None:intergenic
TGCAAACCATCTTCCATGTA+AGG 0.469787 1_4:-72283011 None:intergenic
CAATCTGGAATGCAAGAATT+CGG 0.473861 1_4:+72281148 Msa0183380:CDS
CAAGACGTTCTAAAGGTGTT+GGG 0.475156 1_4:+72277302 Msa0183380:CDS
CTTATTCCCACCCCAGGAGT+TGG 0.477168 1_4:+72282556 Msa0183380:CDS
TCAGCTGTTACTGATCAATC+TGG 0.478932 1_4:+72281133 Msa0183380:CDS
CTACAGCATCTGTTGCTAAC+GGG 0.479490 1_4:+72278548 Msa0183380:CDS
GGCCTTAATCTACAAGCAAT+GGG 0.483020 1_4:+72282514 Msa0183380:CDS
AGCATTACTCATGCAGAAGT+TGG 0.485791 1_4:+72282354 Msa0183380:CDS
AAATCTTAAGTAGACAAATC+CGG 0.486003 1_4:-72282954 None:intergenic
ATCGGAAGCAGAAAAGAATC+TGG 0.487315 1_4:+72278519 Msa0183380:CDS
GCGCCGATTGTATCAATAGT+AGG 0.495158 1_4:-72282619 None:intergenic
AGTGCACAGCGGGCCTTACA+TGG 0.497162 1_4:+72282998 Msa0183380:CDS
CATGAGTAATGCTCGGGAAG+AGG 0.500452 1_4:-72282344 None:intergenic
ATCTGCAATAAGTGCACAGC+GGG 0.503256 1_4:+72282988 Msa0183380:CDS
TATGAGTTCTTCTCAAGGGC+TGG 0.503681 1_4:+72276796 Msa0183380:CDS
ACCTGAAAGCGCTATTGCCA+TGG 0.505680 1_4:-72278461 None:intergenic
ATGATGATGATGTTGATCAT+TGG 0.505715 1_4:+72273476 Msa0183380:CDS
CAAAATTCTGAACCTAAGAA+TGG 0.508101 1_4:+72273400 Msa0183380:CDS
AAATCAAAGTTCATGTGGGT+GGG 0.508587 1_4:-72283315 None:intergenic
AGGAACCAGATAGAGAAAAC+AGG 0.508947 1_4:+72273830 Msa0183380:CDS
AGGCCTTAATCTACAAGCAA+TGG 0.510829 1_4:+72282513 Msa0183380:CDS
GTTCTAAGGGCAATGGGGAT+AGG 0.513112 1_4:+72273584 Msa0183380:CDS
TTCACAGATTTCTCTTAAAG+CGG 0.516431 1_4:+72276759 Msa0183380:intron
AATAGCCAGTTGGAGATTGG+TGG 0.519548 1_4:+72279722 Msa0183380:CDS
AGCGGGCCTTACATGGAAGA+TGG 0.519802 1_4:+72283005 Msa0183380:CDS
AAAGAGATAGAAGGAATCAA+GGG 0.520589 1_4:+72273674 Msa0183380:CDS
ATTTCATTGTTCAACTGCGA+TGG 0.520752 1_4:+72273342 Msa0183380:exon
TGGCATTCCAACTCCTGGGG+TGG 0.521399 1_4:-72282563 None:intergenic
GAAGGGAGAGAGACAGAGAC+CGG 0.523936 1_4:+72273644 Msa0183380:CDS
TCTGTGAGCAGGAGGAGTGC+CGG 0.524448 1_4:+72282935 Msa0183380:intron
TGATGATGAAGGTGGTGGAT+TGG 0.525562 1_4:+72281192 Msa0183380:CDS
CCTGAAAGCGCTATTGCCAT+GGG 0.527636 1_4:-72278460 None:intergenic
AAATTTAGGCCCTTATTCTG+GGG 0.528621 1_4:+72278579 Msa0183380:CDS
AATCAAAGTTCATGTGGGTG+GGG 0.529269 1_4:-72283314 None:intergenic
TTTAACAATAAGCATTCACT+TGG 0.530647 1_4:-72282643 None:intergenic
CGCAATTCAAGACGTTCTAA+AGG 0.532669 1_4:+72277295 Msa0183380:CDS
AGTCCTACTATTGATACAAT+CGG 0.537828 1_4:+72282616 Msa0183380:CDS
AAGATAAATCAAAGTTCATG+TGG 0.539205 1_4:-72283320 None:intergenic
CATAGAAGTTCTAAGGGCAA+TGG 0.539953 1_4:+72273577 Msa0183380:CDS
GAATCGATCCTCGTATAACT+GGG 0.541805 1_4:-72283164 None:intergenic
GGGATGTTGAAAGAGATAGA+AGG 0.542287 1_4:+72273665 Msa0183380:CDS
GATGACATTGGGCATTGCAA+AGG 0.544112 1_4:+72278960 Msa0183380:CDS
TATGTTTGATCCGGAAAATG+AGG 0.544620 1_4:+72282669 Msa0183380:CDS
GAGTGAGAGTGAACGAGAGA+AGG 0.545249 1_4:+72273696 Msa0183380:CDS
TAGAGATGGAGAAAGAGGAA+TGG 0.545325 1_4:+72273795 Msa0183380:CDS
ACTTCTGCATGAGTAATGCT+CGG 0.546350 1_4:-72282351 None:intergenic
AATTTAGGCCCTTATTCTGG+GGG 0.547956 1_4:+72278580 Msa0183380:CDS
CGTGACAGGGTAAATAGAGA+TGG 0.549256 1_4:+72273781 Msa0183380:CDS
CCATGGTAACGAAAAGCATT+CGG 0.550728 1_4:+72273127 Msa0183380:five_prime_UTR
GTTCTTCTCAAGGGCTGGCA+AGG 0.552502 1_4:+72276801 Msa0183380:CDS
GGAGTTGGAATGCCAGGTGG+AGG 0.553313 1_4:+72282571 Msa0183380:CDS
GGCATTCCAACTCCTGGGGT+GGG 0.554138 1_4:-72282562 None:intergenic
CGTCGTTCACGGTCTAGAGA+TGG 0.557047 1_4:+72273535 Msa0183380:CDS
TTACTGAAGCTGATCTTCGT+AGG 0.557966 1_4:+72278641 Msa0183380:CDS
TCTTCTTGGTCAACCAGTGA+TGG 0.558447 1_4:+72278489 Msa0183380:CDS
CGATGTCATGTCTGTCCCCA+TGG 0.560163 1_4:+72278444 Msa0183380:CDS
CAGATGCCTCTTGATGACAT+TGG 0.560834 1_4:+72278948 Msa0183380:CDS
TAAATCAAAGTTCATGTGGG+TGG 0.564429 1_4:-72283316 None:intergenic
AAGCATTCAAAATCTAGAGA+TGG 0.565325 1_4:+72273502 Msa0183380:CDS
TCCAATTCCAATAAGTGCCA+TGG 0.567362 1_4:+72273110 Msa0183380:five_prime_UTR
GGGGTATATATAACATAACT+TGG 0.568317 1_4:-72283295 None:intergenic
GTAGCTCTTATTCCCACCCC+AGG 0.569618 1_4:+72282550 Msa0183380:CDS
GTTCAACATAGAAGTTCTAA+GGG 0.570581 1_4:+72273571 Msa0183380:CDS
CTTCTGCATGAGTAATGCTC+GGG 0.570793 1_4:-72282350 None:intergenic
CTTTAGAACGTCTTGAATTG+CGG 0.570798 1_4:-72277294 None:intergenic
ATCGCAGTGGCATTGCATCA+AGG 0.573059 1_4:+72282377 Msa0183380:CDS
TACTGAAGCTGATCTTCGTA+GGG 0.577585 1_4:+72278642 Msa0183380:CDS
CGTTTATGAGTTCTTCTCAA+GGG 0.577829 1_4:+72276792 Msa0183380:CDS
ATCAATGTAATTGCCGTCAG+AGG 0.581835 1_4:-72283489 None:intergenic
GATTGGTGGGAGGACAATCA+AGG 0.581844 1_4:+72279736 Msa0183380:CDS
ACCTGGCATTCCAACTCCTG+GGG 0.582546 1_4:-72282566 None:intergenic
TGAACTTGGAGACCTCCACC+TGG 0.583833 1_4:-72282583 None:intergenic
TCTACAGCATCTGTTGCTAA+CGG 0.585181 1_4:+72278547 Msa0183380:CDS
ATTGATGATGATGAAGGTGG+TGG 0.588755 1_4:+72281187 Msa0183380:CDS
CAATGCCCAATGTCATCAAG+AGG 0.592641 1_4:-72278954 None:intergenic
TAGAGATGGAGACAAGGAGA+AGG 0.593241 1_4:+72273549 Msa0183380:CDS
ACCAGTGATGGTGAAGCCAT+CGG 0.593462 1_4:+72278501 Msa0183380:CDS
AGTTCATAGTCGAAACTCAA+AGG 0.593538 1_4:+72273453 Msa0183380:CDS
TATCAAGTAGTGGAATGATA+GGG 0.596323 1_4:+72283218 Msa0183380:three_prime_UTR
ATAGCCAGTTGGAGATTGGT+GGG 0.598010 1_4:+72279723 Msa0183380:CDS
TTCTGAACCTAAGAATGGTG+TGG 0.599396 1_4:+72273405 Msa0183380:CDS
AGATAGCAAATGAGTTCTTG+GGG 0.603835 1_4:+72283189 Msa0183380:exon
CGGTGAAGAGAAGCATAGAA+GGG 0.604123 1_4:+72273627 Msa0183380:CDS
ATGGAGAAAGAGGAATGGCA+AGG 0.607009 1_4:+72273800 Msa0183380:CDS
GGTGCAAGAAGGCTCTATGT+TGG 0.610158 1_4:+72278601 Msa0183380:CDS
TAGAGAGATGAGTCGTGACA+GGG 0.610522 1_4:+72273768 Msa0183380:CDS
TGGAGAAAGAGGAATGGCAA+GGG 0.610630 1_4:+72273801 Msa0183380:CDS
ACGTTTATGAGTTCTTCTCA+AGG 0.612320 1_4:+72276791 Msa0183380:CDS
GGTGATATTGATGATGATGA+AGG 0.615807 1_4:+72281181 Msa0183380:CDS
CAATGTAATTCATCCTCTGA+CGG 0.619231 1_4:+72283476 Msa0183380:three_prime_UTR
GTGGGAATAAGAGCTACTGC+TGG 0.624602 1_4:-72282544 None:intergenic
CGTAATTGGTCTGTACTATG+TGG 0.626456 1_4:+72283524 Msa0183380:three_prime_UTR
AAGAGAGACAGGGATAGAGA+CGG 0.630880 1_4:+72273607 Msa0183380:CDS
ATCACTGGTTGACCAAGAAG+AGG 0.635615 1_4:-72278487 None:intergenic
AAGGGAGAGAGACAGAGACC+GGG 0.638082 1_4:+72273645 Msa0183380:CDS
AGATAAATCAAAGTTCATGT+GGG 0.645676 1_4:-72283319 None:intergenic
TTGTTGAATTGAATCAAACA+AGG 0.648364 1_4:-72273155 None:intergenic
TAAGGGCCTAAATTTCCAGA+AGG 0.648555 1_4:-72278571 None:intergenic
GAAGCAAAAGCATTTCTGGA+AGG 0.650865 1_4:+72273731 Msa0183380:CDS
TCAGAGCTTGAATAGCCAGT+TGG 0.660361 1_4:+72279712 Msa0183380:CDS
CCAGGAGTTGGAATGCCAGG+TGG 0.674750 1_4:+72282568 Msa0183380:CDS
ACGGTCTAGAGATGGAGACA+AGG 0.676875 1_4:+72273543 Msa0183380:CDS
GATGCAGACCTTGTTGAGCG+AGG 0.680245 1_4:-72273216 None:intergenic
GGTAACGAAAAGCATTCGGT+CGG 0.683585 1_4:+72273131 Msa0183380:five_prime_UTR
GATATTGATGATGATGAAGG+TGG 0.683755 1_4:+72281184 Msa0183380:CDS
GCCAGTTGGAGATTGGTGGG+AGG 0.684582 1_4:+72279726 Msa0183380:CDS
TCTGGAATGCAAGAATTCGG+CGG 0.689367 1_4:+72281151 Msa0183380:CDS
ATGCAGAAGTTGGATCGCAG+TGG 0.693345 1_4:+72282364 Msa0183380:CDS
TAGAAGTTCTAAGGGCAATG+GGG 0.702855 1_4:+72273579 Msa0183380:CDS
AATCGATCCTCGTATAACTG+GGG 0.710279 1_4:-72283163 None:intergenic
TGGGGATAGGAAGAGAGACA+GGG 0.717842 1_4:+72273597 Msa0183380:CDS
CTGAAAGCGCTATTGCCATG+GGG 0.726318 1_4:-72278459 None:intergenic
GATAGCAAATGAGTTCTTGG+GGG 0.731042 1_4:+72283190 Msa0183380:exon
GTAGGTTCCCCAGTTATACG+AGG 0.752635 1_4:+72283156 Msa0183380:intron
AATCTGCAATAAGTGCACAG+CGG 0.813207 1_4:+72282987 Msa0183380:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAACAAAAAAGTTATAT+GGG - chr1_4:72276187-72276206 None:intergenic 10.0%
!! ATAAAAACAAAAAAGTTATA+TGG - chr1_4:72276188-72276207 None:intergenic 10.0%
!!! TCTAATTTTGAAAATATTTT+CGG + chr1_4:72277351-72277370 Msa0183380:intron 10.0%
!!! AAATTGAGTATTTTTAATTA+AGG + chr1_4:72277808-72277827 Msa0183380:intron 10.0%
!! TTAATATATTTCTTCATTTA+TGG - chr1_4:72278082-72278101 None:intergenic 10.0%
!! TGAAGAAATATATTAATATT+AGG + chr1_4:72278086-72278105 Msa0183380:intron 10.0%
!! CTATTTAATAAATTAATGAA+AGG + chr1_4:72278365-72278384 Msa0183380:intron 10.0%
!! AAAAATTGATACAAATAATT+TGG - chr1_4:72279027-72279046 None:intergenic 10.0%
!! ATTTGATAAAAAAAATTAAG+AGG - chr1_4:72281252-72281271 None:intergenic 10.0%
!! TTCAAATTAATTTATGAAAA+GGG - chr1_4:72282263-72282282 None:intergenic 10.0%
!! ATTCAAATTAATTTATGAAA+AGG - chr1_4:72282264-72282283 None:intergenic 10.0%
!!! ATATCTATATGATTTTGATT+CGG + chr1_4:72273085-72273104 Msa0183380:five_prime_UTR 15.0%
!! AATTATATATAATCGTGTAA+TGG - chr1_4:72273273-72273292 None:intergenic 15.0%
!! AATGAAATATTCGAATTAAT+TGG - chr1_4:72273330-72273349 None:intergenic 15.0%
!! TAAAAGAATAAAACTTAAGT+GGG - chr1_4:72273864-72273883 None:intergenic 15.0%
!!! ACACAAAAATAACAATTTTT+TGG + chr1_4:72273889-72273908 Msa0183380:intron 15.0%
!! AGAAACATTAATAAATTTCA+AGG - chr1_4:72274238-72274257 None:intergenic 15.0%
!! GTTAAATAAATAATAAAGGA+TGG - chr1_4:72274542-72274561 None:intergenic 15.0%
!! AAAAACTAAAAACATAACAA+AGG - chr1_4:72274581-72274600 None:intergenic 15.0%
!! AAATTCAAATAACAAAAGAT+TGG - chr1_4:72274787-72274806 None:intergenic 15.0%
!!! AGTATATATAAGATTTTAAC+AGG + chr1_4:72276093-72276112 Msa0183380:intron 15.0%
!! ATCTTTGTATAACAAATTAT+TGG - chr1_4:72276489-72276508 None:intergenic 15.0%
!!! TTAAAGAATAAATGGTTTTT+TGG - chr1_4:72277212-72277231 None:intergenic 15.0%
!! CTTTAATTAACGTATTAAAA+TGG - chr1_4:72277432-72277451 None:intergenic 15.0%
!!! CATTTTAATACGTTAATTAA+AGG + chr1_4:72277430-72277449 Msa0183380:intron 15.0%
!!! TTTATTCTTTAATCCTTTTA+AGG + chr1_4:72278001-72278020 Msa0183380:intron 15.0%
!! ATTATGTTTAATTCCTTAAA+AGG - chr1_4:72278017-72278036 None:intergenic 15.0%
!!! TTTTATTGAATCATCATTTT+AGG + chr1_4:72278196-72278215 Msa0183380:intron 15.0%
!! GAAAATAAAGTACAAATATA+AGG - chr1_4:72278392-72278411 None:intergenic 15.0%
!! ATGCTAATCTAATAATATAT+TGG + chr1_4:72279589-72279608 Msa0183380:intron 15.0%
!! TGATAAAATTGTGTTATAAT+GGG + chr1_4:72280643-72280662 Msa0183380:intron 15.0%
!!! TTAAAAATTGGTACATTTTT+TGG + chr1_4:72282100-72282119 Msa0183380:intron 15.0%
!!! CAATTACATTGATTTTTTTA+TGG + chr1_4:72283499-72283518 Msa0183380:three_prime_UTR 15.0%
!!! AGATGATATGCAATTTTTTA+GGG - chr1_4:72273044-72273063 None:intergenic 20.0%
!!! AAGATGATATGCAATTTTTT+AGG - chr1_4:72273045-72273064 None:intergenic 20.0%
!! CTAAAAGAATAAAACTTAAG+TGG - chr1_4:72273865-72273884 None:intergenic 20.0%
!!! ACTAAGCTTTAATCTTATAT+CGG - chr1_4:72274094-72274113 None:intergenic 20.0%
!! TCTGAATGATATTTATGTTT+GGG + chr1_4:72274260-72274279 Msa0183380:intron 20.0%
!! ATAAATAATAAAGGATGGAA+GGG - chr1_4:72274537-72274556 None:intergenic 20.0%
!! AATAAATAATAAAGGATGGA+AGG - chr1_4:72274538-72274557 None:intergenic 20.0%
!!! TTTTAGTTTTTTTTTGCTAG+TGG + chr1_4:72274590-72274609 Msa0183380:intron 20.0%
!!! GTTGTTTACTTTTATATCAT+TGG + chr1_4:72274820-72274839 Msa0183380:intron 20.0%
!! ATAACTAATTATACACAACT+CGG - chr1_4:72275248-72275267 None:intergenic 20.0%
!! TAATTGATGTAAAAGTGAAA+AGG - chr1_4:72275718-72275737 None:intergenic 20.0%
!! AAAAAAAAGTAATGTTGCAA+TGG - chr1_4:72275831-72275850 None:intergenic 20.0%
!!! AAGACATTACTTTTCTTTTT+TGG + chr1_4:72275941-72275960 Msa0183380:intron 20.0%
!! AAAGAAAGTAAATGGAAATA+TGG - chr1_4:72276837-72276856 None:intergenic 20.0%
!! ATATTAGCAAAGAAAGTAAA+TGG - chr1_4:72276845-72276864 None:intergenic 20.0%
!!! ATGCATTTTTACTATTTATC+TGG + chr1_4:72277000-72277019 Msa0183380:intron 20.0%
!!! TTTTAATTAAGGAGAAAACT+TGG + chr1_4:72277819-72277838 Msa0183380:intron 20.0%
!! TATGGATTTAAGAAAATCAT+AGG + chr1_4:72277925-72277944 Msa0183380:intron 20.0%
!!! AAACTTATGTGTTTTTCATA+TGG - chr1_4:72277966-72277985 None:intergenic 20.0%
!! ATGATTGAATTTGTAATTCT+AGG - chr1_4:72278121-72278140 None:intergenic 20.0%
!! AATTGTACTCATGAATAAAA+TGG - chr1_4:72278251-72278270 None:intergenic 20.0%
!!! AATAATTAAAAGGAGCATAA+AGG - chr1_4:72278810-72278829 None:intergenic 20.0%
!! CAGACTTTCAAATAATTAAA+AGG - chr1_4:72278820-72278839 None:intergenic 20.0%
!!! CTTTTAATTATTTGAAAGTC+TGG + chr1_4:72278818-72278837 Msa0183380:intron 20.0%
!! TACAAATAATTTGGTCAAAA+AGG - chr1_4:72279018-72279037 None:intergenic 20.0%
!! ATTGACAACTAATCAATATA+AGG - chr1_4:72279066-72279085 None:intergenic 20.0%
!! CTTTCAATGAATTAAATTGA+GGG + chr1_4:72279103-72279122 Msa0183380:intron 20.0%
!! GAAAATAAAATCTTTGATGA+TGG + chr1_4:72279248-72279267 Msa0183380:intron 20.0%
!! GAAAATTGGATTTAGATAAA+TGG + chr1_4:72279328-72279347 Msa0183380:intron 20.0%
!!! TAATTTGTATCTTGATTTTG+TGG + chr1_4:72279910-72279929 Msa0183380:intron 20.0%
!!! TCTGATATTCAACATTATTT+TGG + chr1_4:72280023-72280042 Msa0183380:intron 20.0%
!!! CTGATATTCAACATTATTTT+GGG + chr1_4:72280024-72280043 Msa0183380:intron 20.0%
!!! TGATATTCAACATTATTTTG+GGG + chr1_4:72280025-72280044 Msa0183380:intron 20.0%
!!! ACCTGTATTTAATTTACATT+AGG + chr1_4:72280067-72280086 Msa0183380:intron 20.0%
!! AAGTGTAGTAATATTTACTA+TGG + chr1_4:72280147-72280166 Msa0183380:intron 20.0%
!! TTAGAAGAAAATAACTATCA+AGG + chr1_4:72280221-72280240 Msa0183380:intron 20.0%
!!! GTATTTTCCATTCTTTATAT+TGG - chr1_4:72280313-72280332 None:intergenic 20.0%
!! GTGATAAAATTGTGTTATAA+TGG + chr1_4:72280642-72280661 Msa0183380:intron 20.0%
!!! TATATTGTTATTTGTTAGCA+GGG - chr1_4:72280942-72280961 None:intergenic 20.0%
!!! TTATATTGTTATTTGTTAGC+AGG - chr1_4:72280943-72280962 None:intergenic 20.0%
!!! TATAAATTTTCAGAAACTGT+TGG + chr1_4:72280958-72280977 Msa0183380:intron 20.0%
!! GAATACTATGATGATATTAA+GGG + chr1_4:72280980-72280999 Msa0183380:intron 20.0%
!!! TATTTTTATTGGAGTAGTTT+AGG + chr1_4:72281391-72281410 Msa0183380:intron 20.0%
!! TTATCTTGAAAATTAATGCT+CGG + chr1_4:72281558-72281577 Msa0183380:intron 20.0%
!! TTATACATGTTTCAGAAAAA+TGG + chr1_4:72281587-72281606 Msa0183380:intron 20.0%
!!! TTTTTAAAGCTACAATTCTT+AGG - chr1_4:72281742-72281761 None:intergenic 20.0%
!! ATTTGGATACTTGTATATAT+TGG + chr1_4:72281909-72281928 Msa0183380:intron 20.0%
!! ATATCAAGATCATTGAAATT+TGG - chr1_4:72282024-72282043 None:intergenic 20.0%
!! TCAAAATATGAAAACCAAAA+TGG - chr1_4:72282414-72282433 None:intergenic 20.0%
!!! ATTAGACATAACAAAAGTAT+GGG - chr1_4:72282730-72282749 None:intergenic 20.0%
!! GTTATGTCTAATGATATTAT+TGG + chr1_4:72282738-72282757 Msa0183380:intron 20.0%
!! ATATACAGAAAATCAAACAA+AGG - chr1_4:72283089-72283108 None:intergenic 20.0%
!! TTAATGAATCTTGTATATGA+TGG + chr1_4:72283134-72283153 Msa0183380:intron 20.0%
!! ATGACTTATAAGAAGTTAAA+AGG + chr1_4:72283343-72283362 Msa0183380:three_prime_UTR 20.0%
!!! ATTTTTTTATGGATCGTAAT+TGG + chr1_4:72283510-72283529 Msa0183380:three_prime_UTR 20.0%
!!! GTTTAACTTAGTTAGTCTTT+TGG + chr1_4:72273007-72273026 Msa0183380:five_prime_UTR 25.0%
! TTGTTGAATTGAATCAAACA+AGG - chr1_4:72273158-72273177 None:intergenic 25.0%
! GCTATTTAGTTAGTTAGTTA+GGG - chr1_4:72273187-72273206 None:intergenic 25.0%
! TTAAGATGAAAGTGAAATGA+AGG - chr1_4:72273248-72273267 None:intergenic 25.0%
!! TCTAGAATCTATGAAGTATT+TGG - chr1_4:72273977-72273996 None:intergenic 25.0%
! AAGCTTAAGCTATTAAACAA+GGG - chr1_4:72274054-72274073 None:intergenic 25.0%
! AAAGCTTAAGCTATTAAACA+AGG - chr1_4:72274055-72274074 None:intergenic 25.0%
!! GTTTAATAGCTTAAGCTTTT+TGG + chr1_4:72274056-72274075 Msa0183380:intron 25.0%
! GTCTGAATGATATTTATGTT+TGG + chr1_4:72274259-72274278 Msa0183380:intron 25.0%
! GATCCATCCTTTATTATTTA+GGG + chr1_4:72274341-72274360 Msa0183380:intron 25.0%
! TAAATAATAAAGGATGGAAG+GGG - chr1_4:72274536-72274555 None:intergenic 25.0%
! AAAACATAAGTATGACCTTT+AGG - chr1_4:72274720-72274739 None:intergenic 25.0%
!!! TATGCATTTTAAGGTTGTAT+TGG + chr1_4:72274942-72274961 Msa0183380:intron 25.0%
! TGCAAATATGTTATTCTCTT+TGG + chr1_4:72275015-72275034 Msa0183380:intron 25.0%
! TATCTGTACAAAATTACAAG+CGG - chr1_4:72275058-72275077 None:intergenic 25.0%
! ACTGCATGTTTAAAAGAAAA+AGG - chr1_4:72275148-72275167 None:intergenic 25.0%
! TAACTAATTATACACAACTC+GGG - chr1_4:72275247-72275266 None:intergenic 25.0%
! TTATTAGTTATGCTGTTCAA+CGG + chr1_4:72275264-72275283 Msa0183380:intron 25.0%
! ATTAAGCAACTAAGTTCAAA+GGG - chr1_4:72275491-72275510 None:intergenic 25.0%
! AATTAAGCAACTAAGTTCAA+AGG - chr1_4:72275492-72275511 None:intergenic 25.0%
! AAAAGATACTAGAGTTTAGA+AGG + chr1_4:72275677-72275696 Msa0183380:intron 25.0%
! CATCTATTTAATCATGTCAT+TGG + chr1_4:72275997-72276016 Msa0183380:intron 25.0%
! AATCATGTGTTAATAGCAAT+TGG + chr1_4:72276222-72276241 Msa0183380:intron 25.0%
! GAATTTAAAAGAATCAAACC+TGG - chr1_4:72276287-72276306 None:intergenic 25.0%
! AATTCAAAACTATGTTACCT+GGG + chr1_4:72276323-72276342 Msa0183380:intron 25.0%
! TCTATGTTATTAGCAGAAAA+TGG + chr1_4:72276931-72276950 Msa0183380:intron 25.0%
! TTTCAAACCATATATTTCAG+AGG - chr1_4:72276972-72276991 None:intergenic 25.0%
!! TCTGAAATATATGGTTTGAA+AGG + chr1_4:72276971-72276990 Msa0183380:intron 25.0%
!!! GGTTTTTTGGATGATAAAAA+GGG - chr1_4:72277199-72277218 None:intergenic 25.0%
!!! TGGTTTTTTGGATGATAAAA+AGG - chr1_4:72277200-72277219 None:intergenic 25.0%
! GGTCAAAGTTAAAGAATAAA+TGG - chr1_4:72277220-72277239 None:intergenic 25.0%
!!! TCTATTACTGATTTATTTCC+AGG + chr1_4:72277246-72277265 Msa0183380:intron 25.0%
! GTAAGTCATATTCAATTGAA+AGG - chr1_4:72277386-72277405 None:intergenic 25.0%
! TCAATTGAATATGACTTACT+AGG + chr1_4:72277387-72277406 Msa0183380:intron 25.0%
! AATCCTACATATTTAGATCA+GGG - chr1_4:72277550-72277569 None:intergenic 25.0%
! AAATCCTACATATTTAGATC+AGG - chr1_4:72277551-72277570 None:intergenic 25.0%
! CATAAAGTAAATCATCACTT+TGG - chr1_4:72277691-72277710 None:intergenic 25.0%
!! ATATATATGAAAAGCACATG+AGG - chr1_4:72277853-72277872 None:intergenic 25.0%
!! AACTGAAAATACTCTTTTTG+TGG + chr1_4:72277880-72277899 Msa0183380:intron 25.0%
!! AACAAACTTTGGGAAATTTA+TGG + chr1_4:72277907-72277926 Msa0183380:intron 25.0%
! GTTTCTTACTAATAGAAAAG+AGG + chr1_4:72278141-72278160 Msa0183380:intron 25.0%
! AAAATGGAACTAAAATGACT+TGG - chr1_4:72278235-72278254 None:intergenic 25.0%
!! TTAGTTGTCAATATCTTTTG+TGG + chr1_4:72279074-72279093 Msa0183380:intron 25.0%
! GCTTTCAATGAATTAAATTG+AGG + chr1_4:72279102-72279121 Msa0183380:intron 25.0%
! ACATTCACGATAGAATATTA+TGG - chr1_4:72279174-72279193 None:intergenic 25.0%
! GCATTCATAAAGATTATGTA+AGG + chr1_4:72279222-72279241 Msa0183380:intron 25.0%
!! TTTTCTCTTGAGAAAATTGA+TGG + chr1_4:72279283-72279302 Msa0183380:intron 25.0%
! TAAATGGTATACAATTCTCA+TGG + chr1_4:72279344-72279363 Msa0183380:intron 25.0%
!! AGCTTTGATCATTAAAAAAG+TGG + chr1_4:72279453-72279472 Msa0183380:intron 25.0%
!! TGAAGTTTGAACTTGATTTT+TGG + chr1_4:72279485-72279504 Msa0183380:intron 25.0%
!! CTTATAGATTTGAGTTTAGT+TGG + chr1_4:72279772-72279791 Msa0183380:intron 25.0%
! AGCCTAATATTAGTAAAAGA+AGG - chr1_4:72279798-72279817 None:intergenic 25.0%
!!! GATATTCAACATTATTTTGG+GGG + chr1_4:72280026-72280045 Msa0183380:intron 25.0%
!!! ATATTCAACATTATTTTGGG+GGG + chr1_4:72280027-72280046 Msa0183380:intron 25.0%
! GCCTAATGTAAATTAAATAC+AGG - chr1_4:72280071-72280090 None:intergenic 25.0%
! TGATCTCAATATGATAGATT+TGG + chr1_4:72280190-72280209 Msa0183380:intron 25.0%
! AGAAAATAACTATCAAGGAA+AGG + chr1_4:72280226-72280245 Msa0183380:intron 25.0%
! TAAAGAATTGAAAGTAGCAA+AGG + chr1_4:72280280-72280299 Msa0183380:intron 25.0%
! AATCCTTCCAATATAAAGAA+TGG + chr1_4:72280303-72280322 Msa0183380:intron 25.0%
! TTTCCATTCTTTATATTGGA+AGG - chr1_4:72280309-72280328 None:intergenic 25.0%
!! TAACACAATTTTATCACAGA+AGG - chr1_4:72280639-72280658 None:intergenic 25.0%
! AATGGGAACAATTAAGAAAA+TGG + chr1_4:72280707-72280726 Msa0183380:intron 25.0%
! ATGGGAACAATTAAGAAAAT+GGG + chr1_4:72280708-72280727 Msa0183380:intron 25.0%
!! TAGTTTGTAGAGATTAGAAA+GGG - chr1_4:72280805-72280824 None:intergenic 25.0%
!!! TTAGTTTGTAGAGATTAGAA+AGG - chr1_4:72280806-72280825 None:intergenic 25.0%
!!! TCATGCTGAAAATTTTAGAA+GGG - chr1_4:72280880-72280899 None:intergenic 25.0%
!! ATCATGCTGAAAATTTTAGA+AGG - chr1_4:72280881-72280900 None:intergenic 25.0%
! GGAATACTATGATGATATTA+AGG + chr1_4:72280979-72280998 Msa0183380:intron 25.0%
! CATATCCTTTCTATTAGAAA+TGG + chr1_4:72281278-72281297 Msa0183380:intron 25.0%
!! ACCTTATTTCCATATTTAGT+TGG + chr1_4:72281455-72281474 Msa0183380:intron 25.0%
! ACCAACTAAATATGGAAATA+AGG - chr1_4:72281459-72281478 None:intergenic 25.0%
! GAAAATTACCAAGTATGTTT+GGG - chr1_4:72281797-72281816 None:intergenic 25.0%
! TGAAAATTACCAAGTATGTT+TGG - chr1_4:72281798-72281817 None:intergenic 25.0%
!! TCTTTACATGGTTTTCAATT+TGG + chr1_4:72281892-72281911 Msa0183380:intron 25.0%
!!! GGTTGTTTCTGTTTAAAAAT+TGG + chr1_4:72282088-72282107 Msa0183380:intron 25.0%
! AAGGACTGAAAATTTAAGAA+AGG - chr1_4:72282319-72282338 None:intergenic 25.0%
! TTTAACAATAAGCATTCACT+TGG - chr1_4:72282646-72282665 None:intergenic 25.0%
! GTTAAAGAATATGTTTGATC+CGG + chr1_4:72282660-72282679 Msa0183380:CDS 25.0%
!! TTAGACATAACAAAAGTATG+GGG - chr1_4:72282729-72282748 None:intergenic 25.0%
! CATTAGACATAACAAAAGTA+TGG - chr1_4:72282731-72282750 None:intergenic 25.0%
! AAATCTTAAGTAGACAAATC+CGG - chr1_4:72282957-72282976 None:intergenic 25.0%
!! ATTCATTAAACTTCTGGTTA+GGG - chr1_4:72283123-72283142 None:intergenic 25.0%
! TACAAGATTCATTAAACTTC+TGG - chr1_4:72283129-72283148 None:intergenic 25.0%
! AGATAAATCAAAGTTCATGT+GGG - chr1_4:72283322-72283341 None:intergenic 25.0%
! AAGATAAATCAAAGTTCATG+TGG - chr1_4:72283323-72283342 None:intergenic 25.0%
!!! TATTGGTTTTATTAGTTTGC+AGG + chr1_4:72283415-72283434 Msa0183380:three_prime_UTR 25.0%
!!! ATTGGTTTTATTAGTTTGCA+GGG + chr1_4:72283416-72283435 Msa0183380:three_prime_UTR 25.0%
CGCTATTTAGTTAGTTAGTT+AGG - chr1_4:72273188-72273207 None:intergenic 30.0%
GAAAGTGAAATGAAGGAAAA+TGG - chr1_4:72273241-72273260 None:intergenic 30.0%
CAAAATTCTGAACCTAAGAA+TGG + chr1_4:72273400-72273419 Msa0183380:CDS 30.0%
! ATGATGATGATGTTGATCAT+TGG + chr1_4:72273476-72273495 Msa0183380:CDS 30.0%
AAGCATTCAAAATCTAGAGA+TGG + chr1_4:72273502-72273521 Msa0183380:CDS 30.0%
! GTTCAACATAGAAGTTCTAA+GGG + chr1_4:72273571-72273590 Msa0183380:CDS 30.0%
AAAGAGATAGAAGGAATCAA+GGG + chr1_4:72273674-72273693 Msa0183380:CDS 30.0%
!! GATCTAGAATTTTGTCCTTA+TGG + chr1_4:72274164-72274183 Msa0183380:intron 30.0%
CGATCCATCCTTTATTATTT+AGG + chr1_4:72274340-72274359 Msa0183380:intron 30.0%
CTACCCTAAATAATAAAGGA+TGG - chr1_4:72274347-72274366 None:intergenic 30.0%
CTTGTTTGAAAAACAAGGTA+AGG - chr1_4:72274441-72274460 None:intergenic 30.0%
!!! TACCTTGTTTTTCAAACAAG+AGG + chr1_4:72274441-72274460 Msa0183380:intron 30.0%
AAATAATAAAGGATGGAAGG+GGG - chr1_4:72274535-72274554 None:intergenic 30.0%
!! GATTGGCTTAAACTTAAAGA+AGG - chr1_4:72274770-72274789 None:intergenic 30.0%
! AACTCGGTTTATGCATTTTA+AGG + chr1_4:72274933-72274952 Msa0183380:intron 30.0%
ATCTGTACAAAATTACAAGC+GGG - chr1_4:72275057-72275076 None:intergenic 30.0%
ATCTGACACCAATCATTATT+TGG + chr1_4:72275101-72275120 Msa0183380:intron 30.0%
GCATAAGTCCAAATAATGAT+TGG - chr1_4:72275112-72275131 None:intergenic 30.0%
! GAACATTGACCTTTAGATTT+TGG + chr1_4:72275307-72275326 Msa0183380:intron 30.0%
!! ACCTTTAGATTTTGGCAATT+GGG + chr1_4:72275315-72275334 Msa0183380:intron 30.0%
GCATTGAAATCTTAAGTCTT+GGG + chr1_4:72275342-72275361 Msa0183380:intron 30.0%
TTAAGCAACTAAGTTCAAAG+GGG - chr1_4:72275490-72275509 None:intergenic 30.0%
TAAATGCAGAAACAGAAACT+GGG - chr1_4:72275630-72275649 None:intergenic 30.0%
! TGTTTCTGCATTTAGTAGAT+TGG + chr1_4:72275636-72275655 Msa0183380:intron 30.0%
AAAGTGAAAAGGACACTAAT+TGG - chr1_4:72275707-72275726 None:intergenic 30.0%
!! TCACAATTTCTTTGAGACAA+TGG + chr1_4:72275740-72275759 Msa0183380:intron 30.0%
TGTGGGAAATGGTAATTAAA+GGG - chr1_4:72276260-72276279 None:intergenic 30.0%
TTGTGGGAAATGGTAATTAA+AGG - chr1_4:72276261-72276280 None:intergenic 30.0%
CAATTCAAAACTATGTTACC+TGG + chr1_4:72276322-72276341 Msa0183380:intron 30.0%
ATTCAAAACTATGTTACCTG+GGG + chr1_4:72276324-72276343 Msa0183380:intron 30.0%
TAAATTAACATGAAATCCCC+AGG - chr1_4:72276343-72276362 None:intergenic 30.0%
! TTTTCCCAACACAAATTTTC+AGG - chr1_4:72276452-72276471 None:intergenic 30.0%
AAATTTGTGTTGGGAAAACA+TGG + chr1_4:72276454-72276473 Msa0183380:intron 30.0%
ACAATTATAGTCCAAGTTGT+AGG - chr1_4:72276560-72276579 None:intergenic 30.0%
AAAGCTTTCAAGATTAGATC+TGG - chr1_4:72276739-72276758 None:intergenic 30.0%
TTCACAGATTTCTCTTAAAG+CGG + chr1_4:72276759-72276778 Msa0183380:intron 30.0%
ATTGAATTCTTTCGTTACTG+TGG + chr1_4:72276869-72276888 Msa0183380:intron 30.0%
CATATATTTCAGAGGTCAAA+AGG - chr1_4:72276964-72276983 None:intergenic 30.0%
!!! CTTTTGACCTCTGAAATATA+TGG + chr1_4:72276962-72276981 Msa0183380:intron 30.0%
CTATTTATCTGGTGAAACAT+TGG + chr1_4:72277011-72277030 Msa0183380:intron 30.0%
! ATTCTTTAACTTTGACCTTC+TGG + chr1_4:72277223-72277242 Msa0183380:intron 30.0%
TAAATCAGTAATAGACCAGA+AGG - chr1_4:72277241-72277260 None:intergenic 30.0%
AATCCCTGATCTAAATATGT+AGG + chr1_4:72277544-72277563 Msa0183380:intron 30.0%
! TGCAGTATTCTAAAAGTTGT+TGG + chr1_4:72277578-72277597 Msa0183380:intron 30.0%
TTTGTGGTTACAACAAACTT+TGG + chr1_4:72277896-72277915 Msa0183380:intron 30.0%
TTGTGGTTACAACAAACTTT+GGG + chr1_4:72277897-72277916 Msa0183380:intron 30.0%
TGCTGTTGATATCATTCATA+TGG + chr1_4:72278048-72278067 Msa0183380:intron 30.0%
ACATTGTGATGTCAATTTGA+TGG - chr1_4:72278327-72278346 None:intergenic 30.0%
!! TATGATTGATTCTCTAGAAC+TGG + chr1_4:72278713-72278732 Msa0183380:intron 30.0%
! TATTTGAAAGTCTGGAATGA+CGG + chr1_4:72278826-72278845 Msa0183380:intron 30.0%
CAACTAATTAGAAGCAATGA+TGG - chr1_4:72278864-72278883 None:intergenic 30.0%
! TTTTCCATGTTTGCTTGTTT+AGG + chr1_4:72278893-72278912 Msa0183380:intron 30.0%
TTGAAGCAAGTCTTGAAAAT+TGG + chr1_4:72279314-72279333 Msa0183380:intron 30.0%
! GGCCTTCTTTTACTAATATT+AGG + chr1_4:72279793-72279812 Msa0183380:intron 30.0%
!! TTTTGCAATTTTTTTCCCAC+AGG + chr1_4:72279992-72280011 Msa0183380:intron 30.0%
!!! TATTCAACATTATTTTGGGG+GGG + chr1_4:72280028-72280047 Msa0183380:intron 30.0%
TCTTGGATTACGTTATAATC+AGG + chr1_4:72280253-72280272 Msa0183380:intron 30.0%
! ACCCTTATTTAAAGTATGTC+TGG + chr1_4:72280350-72280369 Msa0183380:intron 30.0%
GCCAGACATACTTTAAATAA+GGG - chr1_4:72280354-72280373 None:intergenic 30.0%
AGCCAGACATACTTTAAATA+AGG - chr1_4:72280355-72280374 None:intergenic 30.0%
ATGGAATCATTTCCATGTAA+TGG - chr1_4:72280437-72280456 None:intergenic 30.0%
ATATGAAATAAGCACAGAGA+TGG - chr1_4:72280615-72280634 None:intergenic 30.0%
!! TGTGCTGAACATTTTTGAAA+TGG + chr1_4:72280689-72280708 Msa0183380:intron 30.0%
!!! GTGCTGAACATTTTTGAAAT+GGG + chr1_4:72280690-72280709 Msa0183380:intron 30.0%
!! AAAATGGGAACATTTTTGAG+AGG + chr1_4:72280723-72280742 Msa0183380:intron 30.0%
CTTATCTGTAACATGTGTAT+TGG + chr1_4:72280840-72280859 Msa0183380:intron 30.0%
!!! TCTATACGTGCTTTTGATTT+TGG + chr1_4:72281010-72281029 Msa0183380:intron 30.0%
TAAGGAGAAAAATAAGCAAC+AGG - chr1_4:72281109-72281128 None:intergenic 30.0%
!! TGTTGCTTATTTTTCTCCTT+AGG + chr1_4:72281108-72281127 Msa0183380:intron 30.0%
!! GGTCTAAAACAATTTTTCTG+AGG - chr1_4:72281231-72281250 None:intergenic 30.0%
GTGTACCATTTCTAATAGAA+AGG - chr1_4:72281286-72281305 None:intergenic 30.0%
CCAATAAAAATAGAGTAACC+AGG - chr1_4:72281383-72281402 None:intergenic 30.0%
!!! CCTGGTTACTCTATTTTTAT+TGG + chr1_4:72281380-72281399 Msa0183380:intron 30.0%
TTGAGAGAACCAACTAAATA+TGG - chr1_4:72281467-72281486 None:intergenic 30.0%
! TTTCAATTCTTTTCACCACA+CGG + chr1_4:72281681-72281700 Msa0183380:intron 30.0%
!!! TTCTTGTTTTCACGGAAAAT+GGG - chr1_4:72281719-72281738 None:intergenic 30.0%
!!! TTCTTAGGTTCTTGTTTTCA+CGG - chr1_4:72281727-72281746 None:intergenic 30.0%
!! TTACTCTGTTAGTCTTTACA+TGG + chr1_4:72281880-72281899 Msa0183380:intron 30.0%
GAAATGAACTAATGAAGCAT+AGG + chr1_4:72281947-72281966 Msa0183380:intron 30.0%
TTAAACAGAAACAACCATAC+AGG - chr1_4:72282084-72282103 None:intergenic 30.0%
AATTTATGAAAAGGGCAACT+TGG - chr1_4:72282255-72282274 None:intergenic 30.0%
ATATGAAAACCAAAATGGCA+GGG - chr1_4:72282409-72282428 None:intergenic 30.0%
AATATGAAAACCAAAATGGC+AGG - chr1_4:72282410-72282429 None:intergenic 30.0%
AATTCTGTTGTCAACAATAC+AGG + chr1_4:72282493-72282512 Msa0183380:CDS 30.0%
AGTCCTACTATTGATACAAT+CGG + chr1_4:72282616-72282635 Msa0183380:CDS 30.0%
!!! ATGTTTTAAGTTCCCAAACT+TGG - chr1_4:72282831-72282850 None:intergenic 30.0%
! TCATGATTTTGTAGTCTCAT+AGG - chr1_4:72282894-72282913 None:intergenic 30.0%
CTTTATGGTACACATATGAT+CGG + chr1_4:72283054-72283073 Msa0183380:intron 30.0%
! TTCATTAAACTTCTGGTTAG+GGG - chr1_4:72283122-72283141 None:intergenic 30.0%
! GATTCATTAAACTTCTGGTT+AGG - chr1_4:72283124-72283143 None:intergenic 30.0%
TGAATCTTGTATATGATGGT+AGG + chr1_4:72283138-72283157 Msa0183380:intron 30.0%
ATCATTCCACTACTTGATAA+TGG - chr1_4:72283217-72283236 None:intergenic 30.0%
! TTATCAAGTAGTGGAATGAT+AGG + chr1_4:72283217-72283236 Msa0183380:three_prime_UTR 30.0%
! TATCAAGTAGTGGAATGATA+GGG + chr1_4:72283218-72283237 Msa0183380:three_prime_UTR 30.0%
GGGGTATATATAACATAACT+TGG - chr1_4:72283298-72283317 None:intergenic 30.0%
!!! TTGGTTTTATTAGTTTGCAG+GGG + chr1_4:72283417-72283436 Msa0183380:three_prime_UTR 30.0%
!!! ACTTAGTTAGTCTTTTGGAG+AGG + chr1_4:72273012-72273031 Msa0183380:five_prime_UTR 35.0%
ATTTCATTGTTCAACTGCGA+TGG + chr1_4:72273342-72273361 Msa0183380:exon 35.0%
AGTTCATAGTCGAAACTCAA+AGG + chr1_4:72273453-72273472 Msa0183380:CDS 35.0%
GGTTCAACATAGAAGTTCTA+AGG + chr1_4:72273570-72273589 Msa0183380:CDS 35.0%
!! ATAGAAGTTCTAAGGGCAAT+GGG + chr1_4:72273578-72273597 Msa0183380:CDS 35.0%
TTCTATCTCTTTCAACATCC+CGG - chr1_4:72273666-72273685 None:intergenic 35.0%
GAAAGAGATAGAAGGAATCA+AGG + chr1_4:72273673-72273692 Msa0183380:CDS 35.0%
GTAAATAGAGATGGAGAAAG+AGG + chr1_4:72273790-72273809 Msa0183380:CDS 35.0%
! GAATACCTGTTTTCTCTATC+TGG - chr1_4:72273838-72273857 None:intergenic 35.0%
GGACAAAATTCTAGATCACT+TGG - chr1_4:72274161-72274180 None:intergenic 35.0%
GTTGTTAGACAATGACCATA+AGG - chr1_4:72274182-72274201 None:intergenic 35.0%
! CTTTATTATTTAGGGTAGCC+CGG + chr1_4:72274349-72274368 Msa0183380:intron 35.0%
ATTAAAGTTCCTGCATACAC+AGG + chr1_4:72274375-72274394 Msa0183380:intron 35.0%
TTAAAGTTCCTGCATACACA+GGG + chr1_4:72274376-72274395 Msa0183380:intron 35.0%
! AGCCTCTTGTTTGAAAAACA+AGG - chr1_4:72274446-72274465 None:intergenic 35.0%
ACAGATAACATGGTGAAAGT+GGG - chr1_4:72274634-72274653 None:intergenic 35.0%
TGTAGCATTCACAGATAACA+TGG - chr1_4:72274644-72274663 None:intergenic 35.0%
! TTGATGATCAGTTTGATTGC+AGG + chr1_4:72274690-72274709 Msa0183380:intron 35.0%
TTGATTGCAGGATATCCTAA+AGG + chr1_4:72274702-72274721 Msa0183380:intron 35.0%
! AATGAATTTTGAGCGATAGC+TGG + chr1_4:72274856-72274875 Msa0183380:intron 35.0%
! ATGAATTTTGAGCGATAGCT+GGG + chr1_4:72274857-72274876 Msa0183380:intron 35.0%
!!! TTCTGAACCCTTTTAGAACT+CGG + chr1_4:72274917-72274936 Msa0183380:intron 35.0%
!! GCATAAACCGAGTTCTAAAA+GGG - chr1_4:72274927-72274946 None:intergenic 35.0%
!! TGCATAAACCGAGTTCTAAA+AGG - chr1_4:72274928-72274947 None:intergenic 35.0%
!! ATAATGATTGGTGTCAGATC+AGG - chr1_4:72275100-72275119 None:intergenic 35.0%
!! GACCTTTAGATTTTGGCAAT+TGG + chr1_4:72275314-72275333 Msa0183380:intron 35.0%
AGACTTAAGATTTCAATGCC+TGG - chr1_4:72275341-72275360 None:intergenic 35.0%
! GGCATTGAAATCTTAAGTCT+TGG + chr1_4:72275341-72275360 Msa0183380:intron 35.0%
CTTCAAAACTTTCTTCCTTC+CGG + chr1_4:72275365-72275384 Msa0183380:intron 35.0%
CTTTCAGATTAGATGTACTC+CGG - chr1_4:72275387-72275406 None:intergenic 35.0%
AAGCATGCATTGCAATAGTT+TGG + chr1_4:72275404-72275423 Msa0183380:intron 35.0%
AGCATGCATTGCAATAGTTT+GGG + chr1_4:72275405-72275424 Msa0183380:intron 35.0%
TAAGCAACTAAGTTCAAAGG+GGG - chr1_4:72275489-72275508 None:intergenic 35.0%
GGGCAAAAACAATGTTCATT+TGG + chr1_4:72275592-72275611 Msa0183380:intron 35.0%
ATGTTCATTTGGCTACATGT+TGG + chr1_4:72275603-72275622 Msa0183380:intron 35.0%
CTAAATGCAGAAACAGAAAC+TGG - chr1_4:72275631-72275650 None:intergenic 35.0%
! ATATGTCCGTCTGTTGTTTA+TGG + chr1_4:72275790-72275809 Msa0183380:intron 35.0%
ATTGATGTGGTAATAGCCTT+TGG + chr1_4:72275881-72275900 Msa0183380:intron 35.0%
TCCAAGATTGTCAAAACCAA+AGG - chr1_4:72275900-72275919 None:intergenic 35.0%
TTATCGAAATCACAAGCACA+AGG - chr1_4:72276070-72276089 None:intergenic 35.0%
AATTTAACCTAGTTCCATGC+AGG + chr1_4:72276357-72276376 Msa0183380:intron 35.0%
GCTCTCATGTTGCAAATTTA+AGG + chr1_4:72276424-72276443 Msa0183380:intron 35.0%
AGGAACCTGAAAATTTGTGT+TGG + chr1_4:72276444-72276463 Msa0183380:intron 35.0%
GGAACCTGAAAATTTGTGTT+GGG + chr1_4:72276445-72276464 Msa0183380:intron 35.0%
TAGGAATACAAGCAAACCTT+TGG - chr1_4:72276541-72276560 None:intergenic 35.0%
TTGCTTGTATTCCTACAACT+TGG + chr1_4:72276546-72276565 Msa0183380:intron 35.0%
! TGTGTTTTGTATCTTGCAGA+CGG + chr1_4:72276577-72276596 Msa0183380:intron 35.0%
ACAGTTCTTTGATCTCTTTC+AGG - chr1_4:72276645-72276664 None:intergenic 35.0%
AAGAACTGTGTTTGCTTATC+AGG + chr1_4:72276656-72276675 Msa0183380:CDS 35.0%
TCAGGTATTCTTAGTACATC+TGG + chr1_4:72276674-72276693 Msa0183380:intron 35.0%
ACGTTTATGAGTTCTTCTCA+AGG + chr1_4:72276791-72276810 Msa0183380:CDS 35.0%
CGTTTATGAGTTCTTCTCAA+GGG + chr1_4:72276792-72276811 Msa0183380:CDS 35.0%
AATTCTTTCGTTACTGTGGT+TGG + chr1_4:72276873-72276892 Msa0183380:intron 35.0%
TTACACATCAATCAATCACC+TGG + chr1_4:72277095-72277114 Msa0183380:intron 35.0%
! ATTGTAGTTTTCCAAACACC+AGG - chr1_4:72277116-72277135 None:intergenic 35.0%
!! CTTTAGAACGTCTTGAATTG+CGG - chr1_4:72277297-72277316 None:intergenic 35.0%
TCAAATCTAACACAATGCCA+TGG + chr1_4:72277502-72277521 Msa0183380:intron 35.0%
TCACTGTACGTAGAAAACTT+TGG - chr1_4:72277646-72277665 None:intergenic 35.0%
!! AAATGACTTGGTAGTGCTAA+TGG - chr1_4:72278223-72278242 None:intergenic 35.0%
CAATATACCTGCAAATGTGA+AGG - chr1_4:72278417-72278436 None:intergenic 35.0%
GAAATTTAGGCCCTTATTCT+GGG + chr1_4:72278578-72278597 Msa0183380:CDS 35.0%
AAATTTAGGCCCTTATTCTG+GGG + chr1_4:72278579-72278598 Msa0183380:CDS 35.0%
AAGATCAGCTTCAGTAATAC+TGG - chr1_4:72278638-72278657 None:intergenic 35.0%
!!! CATCTTGTTTGTTTTGTCCT+TGG + chr1_4:72278671-72278690 Msa0183380:intron 35.0%
! TTTGTCCTTGGATAATTTGC+TGG + chr1_4:72278683-72278702 Msa0183380:intron 35.0%
CCACAATGCATCATATGATA+AGG - chr1_4:72278754-72278773 None:intergenic 35.0%
CCTTATCATATGATGCATTG+TGG + chr1_4:72278751-72278770 Msa0183380:intron 35.0%
AACACCTAAACAAGCAAACA+TGG - chr1_4:72278900-72278919 None:intergenic 35.0%
! GTTTAGGTGTTTGAAGCATT+TGG + chr1_4:72278909-72278928 Msa0183380:intron 35.0%
!! ATTGAGGGAGTACTTCAATT+TGG + chr1_4:72279118-72279137 Msa0183380:intron 35.0%
TACTCATGAATACTGCTACT+TGG + chr1_4:72279561-72279580 Msa0183380:intron 35.0%
GTCTATGTATGATATGCTCA+TGG + chr1_4:72279611-72279630 Msa0183380:intron 35.0%
!!! ATTTTTTGCATCTTCAAGGC+GGG - chr1_4:72279690-72279709 None:intergenic 35.0%
!!! CATTTTTTGCATCTTCAAGG+CGG - chr1_4:72279691-72279710 None:intergenic 35.0%
!!! GAGCATTTTTTGCATCTTCA+AGG - chr1_4:72279694-72279713 None:intergenic 35.0%
!!! ATTCAACATTATTTTGGGGG+GGG + chr1_4:72280029-72280048 Msa0183380:intron 35.0%
TTCCAAATCCTACACTATTC+TGG - chr1_4:72280114-72280133 None:intergenic 35.0%
! AATAGTGTAGGATTTGGAAC+TGG + chr1_4:72280115-72280134 Msa0183380:intron 35.0%
TATCAAGGAAAGGACATTCT+TGG + chr1_4:72280236-72280255 Msa0183380:intron 35.0%
! ATCATTTCCATGTAATGGAG+AGG - chr1_4:72280432-72280451 None:intergenic 35.0%
AAGATAGATGTGAGTGGAAA+AGG - chr1_4:72280763-72280782 None:intergenic 35.0%
GTAGAAAAGATAGATGTGAG+TGG - chr1_4:72280769-72280788 None:intergenic 35.0%
AGATTAGAAAGGGAAGAACA+GGG - chr1_4:72280795-72280814 None:intergenic 35.0%
ATCTGTAACATGTGTATTGG+TGG + chr1_4:72280843-72280862 Msa0183380:intron 35.0%
! TAACATGTGTATTGGTGGTT+TGG + chr1_4:72280848-72280867 Msa0183380:intron 35.0%
!!! TTTTGGCTTGAACTTGTTCT+CGG + chr1_4:72281027-72281046 Msa0183380:intron 35.0%
! ACATTTGTTACGTAGACTAG+AGG + chr1_4:72281068-72281087 Msa0183380:intron 35.0%
GTAGACTAGAGGATCTAAAT+TGG + chr1_4:72281079-72281098 Msa0183380:intron 35.0%
! CAATCTGGAATGCAAGAATT+CGG + chr1_4:72281148-72281167 Msa0183380:CDS 35.0%
!! GGTGATATTGATGATGATGA+AGG + chr1_4:72281181-72281200 Msa0183380:CDS 35.0%
!! GATATTGATGATGATGAAGG+TGG + chr1_4:72281184-72281203 Msa0183380:CDS 35.0%
!! GAATGTTTTGTTGCCAAATG+TGG - chr1_4:72281335-72281354 None:intergenic 35.0%
GTTGTACATGTGATTAAACC+TGG + chr1_4:72281362-72281381 Msa0183380:intron 35.0%
!!! GTTCTTGTTTTCACGGAAAA+TGG - chr1_4:72281720-72281739 None:intergenic 35.0%
TAATAAAACCCAACTGTCCA+AGG + chr1_4:72281819-72281838 Msa0183380:intron 35.0%
TATGAAAACCAAAATGGCAG+GGG - chr1_4:72282408-72282427 None:intergenic 35.0%
ACTGCAAAAAAAGTCACAGA+AGG - chr1_4:72282455-72282474 None:intergenic 35.0%
!!! CTGTGACTTTTTTTGCAGTA+TGG + chr1_4:72282456-72282475 Msa0183380:intron 35.0%
!!! GACTTTTTTTGCAGTATGGT+TGG + chr1_4:72282460-72282479 Msa0183380:intron 35.0%
TTCCCATTGCTTGTAGATTA+AGG - chr1_4:72282519-72282538 None:intergenic 35.0%
TATGTTTGATCCGGAAAATG+AGG + chr1_4:72282669-72282688 Msa0183380:CDS 35.0%
! AATTTAGCCACCTCATTTTC+CGG - chr1_4:72282682-72282701 None:intergenic 35.0%
CTAAATTGCTCTCCTATACT+TGG + chr1_4:72282695-72282714 Msa0183380:intron 35.0%
GAAGGAACTAGACTTTGATT+TGG + chr1_4:72282775-72282794 Msa0183380:intron 35.0%
!! GAATTATTGTTTCTGTGAGC+AGG + chr1_4:72282924-72282943 Msa0183380:intron 35.0%
AATGATCACTGCAAGCTTTA+TGG + chr1_4:72283039-72283058 Msa0183380:CDS 35.0%
!! CAAGAACTCATTTGCTATCT+GGG - chr1_4:72283189-72283208 None:intergenic 35.0%
CAGATAGCAAATGAGTTCTT+GGG + chr1_4:72283188-72283207 Msa0183380:exon 35.0%
AGATAGCAAATGAGTTCTTG+GGG + chr1_4:72283189-72283208 Msa0183380:exon 35.0%
AAATCAAAGTTCATGTGGGT+GGG - chr1_4:72283318-72283337 None:intergenic 35.0%
TAAATCAAAGTTCATGTGGG+TGG - chr1_4:72283319-72283338 None:intergenic 35.0%
!!! AGTTAAAAGGTGCTGCTTTT+AGG + chr1_4:72283356-72283375 Msa0183380:three_prime_UTR 35.0%
!! TTATTAGTTTGCAGGGGTAT+TGG + chr1_4:72283423-72283442 Msa0183380:three_prime_UTR 35.0%
!! TATTAGTTTGCAGGGGTATT+GGG + chr1_4:72283424-72283443 Msa0183380:three_prime_UTR 35.0%
CAATGTAATTCATCCTCTGA+CGG + chr1_4:72283476-72283495 Msa0183380:three_prime_UTR 35.0%
TCCAATTCCAATAAGTGCCA+TGG + chr1_4:72273110-72273129 Msa0183380:five_prime_UTR 40.0%
ACCATGGCACTTATTGGAAT+TGG - chr1_4:72273114-72273133 None:intergenic 40.0%
TTCGTTACCATGGCACTTAT+TGG - chr1_4:72273120-72273139 None:intergenic 40.0%
!! CCATGGTAACGAAAAGCATT+CGG + chr1_4:72273127-72273146 Msa0183380:five_prime_UTR 40.0%
TTCTGAACCTAAGAATGGTG+TGG + chr1_4:72273405-72273424 Msa0183380:CDS 40.0%
! GTCTTTTCCACACCATTCTT+AGG - chr1_4:72273415-72273434 None:intergenic 40.0%
!! CATAGAAGTTCTAAGGGCAA+TGG + chr1_4:72273577-72273596 Msa0183380:CDS 40.0%
!! TAGAAGTTCTAAGGGCAATG+GGG + chr1_4:72273579-72273598 Msa0183380:CDS 40.0%
GGGATGTTGAAAGAGATAGA+AGG + chr1_4:72273665-72273684 Msa0183380:CDS 40.0%
!! GAAGCAAAAGCATTTCTGGA+AGG + chr1_4:72273731-72273750 Msa0183380:CDS 40.0%
TAGAGATGGAGAAAGAGGAA+TGG + chr1_4:72273795-72273814 Msa0183380:CDS 40.0%
AGGAACCAGATAGAGAAAAC+AGG + chr1_4:72273830-72273849 Msa0183380:CDS 40.0%
! AAAGTGCTTCACGATGAACT+TGG - chr1_4:72274010-72274029 None:intergenic 40.0%
CAAGTTAGTTGCATGTCTTG+TGG + chr1_4:72274212-72274231 Msa0183380:intron 40.0%
CGGGCTACCCTAAATAATAA+AGG - chr1_4:72274351-72274370 None:intergenic 40.0%
ATGCAGGAACTTTAATGCAC+CGG - chr1_4:72274371-72274390 None:intergenic 40.0%
CGTACAATACACCAAATGGT+GGG - chr1_4:72274415-72274434 None:intergenic 40.0%
CACAGATAACATGGTGAAAG+TGG - chr1_4:72274635-72274654 None:intergenic 40.0%
TGTACAAAATTACAAGCGGG+TGG - chr1_4:72275054-72275073 None:intergenic 40.0%
!! CTTGCTTTTCATCTCTACTG+CGG + chr1_4:72275171-72275190 Msa0183380:intron 40.0%
!! TTGCTTTTCATCTCTACTGC+GGG + chr1_4:72275172-72275191 Msa0183380:intron 40.0%
GCCCAATTGCCAAAATCTAA+AGG - chr1_4:72275319-72275338 None:intergenic 40.0%
GCATGCATTGCAATAGTTTG+GGG + chr1_4:72275406-72275425 Msa0183380:intron 40.0%
CATGCATTGCAATAGTTTGG+GGG + chr1_4:72275407-72275426 Msa0183380:intron 40.0%
TTGTTCTGTTGCAGAAATGC+TGG + chr1_4:72275516-72275535 Msa0183380:intron 40.0%
AATTCTTCATCTGATGCCTG+TGG + chr1_4:72275571-72275590 Msa0183380:intron 40.0%
ATTCTTCATCTGATGCCTGT+GGG + chr1_4:72275572-72275591 Msa0183380:intron 40.0%
!!! TGAACATTGTTTTTGCCCAC+AGG - chr1_4:72275590-72275609 None:intergenic 40.0%
AAACAACAGACGGACATATG+AGG - chr1_4:72275789-72275808 None:intergenic 40.0%
TTACCACATCAATGACAGCT+AGG - chr1_4:72275874-72275893 None:intergenic 40.0%
!!! GCCTTTGGTTTTGACAATCT+TGG + chr1_4:72275896-72275915 Msa0183380:intron 40.0%
ATGATAAGAATCAGCACCAC+AGG - chr1_4:72275980-72275999 None:intergenic 40.0%
GAATCAAACCTGGAGATTGT+GGG - chr1_4:72276277-72276296 None:intergenic 40.0%
AGAATCAAACCTGGAGATTG+TGG - chr1_4:72276278-72276297 None:intergenic 40.0%
TCAAACCTAAACTGCTCCAA+AGG + chr1_4:72276522-72276541 Msa0183380:intron 40.0%
CAGACGGCATAAAGAGAAAA+AGG + chr1_4:72276593-72276612 Msa0183380:intron 40.0%
TCTCTTTCAGGATCAATCTC+AGG - chr1_4:72276633-72276652 None:intergenic 40.0%
TCAATCAATCACCTGGTGTT+TGG + chr1_4:72277102-72277121 Msa0183380:intron 40.0%
TGGAAAACTACAATCGCAAG+TGG + chr1_4:72277122-72277141 Msa0183380:intron 40.0%
CGCAATTCAAGACGTTCTAA+AGG + chr1_4:72277295-72277314 Msa0183380:CDS 40.0%
!! TCAAGACGTTCTAAAGGTGT+TGG + chr1_4:72277301-72277320 Msa0183380:CDS 40.0%
!! CAAGACGTTCTAAAGGTGTT+GGG + chr1_4:72277302-72277321 Msa0183380:CDS 40.0%
TATGACGCAGTAAATCTCCA+TGG - chr1_4:72277522-72277541 None:intergenic 40.0%
! CAACTCAGTGTAGCTTTTGT+TGG + chr1_4:72277607-72277626 Msa0183380:intron 40.0%
! TTTTCTGCCTTCACATTTGC+AGG + chr1_4:72278407-72278426 Msa0183380:intron 40.0%
! AGATTCTTTTCTGCTTCCGA+TGG - chr1_4:72278520-72278539 None:intergenic 40.0%
ATCGGAAGCAGAAAAGAATC+TGG + chr1_4:72278519-72278538 Msa0183380:CDS 40.0%
TCTACAGCATCTGTTGCTAA+CGG + chr1_4:72278547-72278566 Msa0183380:CDS 40.0%
TAAGGGCCTAAATTTCCAGA+AGG - chr1_4:72278574-72278593 None:intergenic 40.0%
GGAAATTTAGGCCCTTATTC+TGG + chr1_4:72278577-72278596 Msa0183380:CDS 40.0%
AATTTAGGCCCTTATTCTGG+GGG + chr1_4:72278580-72278599 Msa0183380:CDS 40.0%
TTACTGAAGCTGATCTTCGT+AGG + chr1_4:72278641-72278660 Msa0183380:CDS 40.0%
TACTGAAGCTGATCTTCGTA+GGG + chr1_4:72278642-72278661 Msa0183380:CDS 40.0%
CTAGAACTGGTAGACAGAAA+TGG + chr1_4:72278726-72278745 Msa0183380:intron 40.0%
TGTGGAGAGTAGAATGAGAT+AGG + chr1_4:72278769-72278788 Msa0183380:intron 40.0%
AGTAGAATGAGATAGGTTCC+TGG + chr1_4:72278776-72278795 Msa0183380:intron 40.0%
! AGATGCCTCTTGATGACATT+GGG + chr1_4:72278949-72278968 Msa0183380:CDS 40.0%
!! ATTGGGCATTGCAAAGGTTT+TGG + chr1_4:72278966-72278985 Msa0183380:CDS 40.0%
ATCGTTAACACCCCAATACT+CGG - chr1_4:72279150-72279169 None:intergenic 40.0%
TTCATAGCTCTCAAAGTAGC+TGG - chr1_4:72279413-72279432 None:intergenic 40.0%
TTGAATAGCCAGTTGGAGAT+TGG + chr1_4:72279719-72279738 Msa0183380:CDS 40.0%
! TATCAGATTCACTAGCCTGT+GGG - chr1_4:72280010-72280029 None:intergenic 40.0%
! ATATCAGATTCACTAGCCTG+TGG - chr1_4:72280011-72280030 None:intergenic 40.0%
!!! TTCAACATTATTTTGGGGGG+GGG + chr1_4:72280030-72280049 Msa0183380:intron 40.0%
TGTTTGTGCCAGAATAGTGT+AGG + chr1_4:72280103-72280122 Msa0183380:intron 40.0%
TGCCAGAATAGTGTAGGATT+TGG + chr1_4:72280109-72280128 Msa0183380:intron 40.0%
! GGATTTGGAACTGGAATATC+AGG + chr1_4:72280124-72280143 Msa0183380:intron 40.0%
! TGAGAGAATTTTCCGAGTGT+AGG - chr1_4:72280389-72280408 None:intergenic 40.0%
! TTTCCATGTAATGGAGAGGT+GGG - chr1_4:72280428-72280447 None:intergenic 40.0%
! ATTTCCATGTAATGGAGAGG+TGG - chr1_4:72280429-72280448 None:intergenic 40.0%
GGAATGGGAGAGAATATACA+GGG - chr1_4:72280509-72280528 None:intergenic 40.0%
AGGAATGGGAGAGAATATAC+AGG - chr1_4:72280510-72280529 None:intergenic 40.0%
AACAATGCACCAGGAAAAGT+GGG - chr1_4:72280567-72280586 None:intergenic 40.0%
TGCATTGTTCTCCTCATGTT+GGG + chr1_4:72280578-72280597 Msa0183380:intron 40.0%
GGGTCTATCACAATAACAGA+AGG + chr1_4:72280663-72280682 Msa0183380:intron 40.0%
!! GGGAACATTTTTGAGAGGAT+CGG + chr1_4:72280728-72280747 Msa0183380:intron 40.0%
GAGATTAGAAAGGGAAGAAC+AGG - chr1_4:72280796-72280815 None:intergenic 40.0%
TCAGTAACAGCTGATACCTA+AGG - chr1_4:72281127-72281146 None:intergenic 40.0%
TCAGCTGTTACTGATCAATC+TGG + chr1_4:72281133-72281152 Msa0183380:CDS 40.0%
!! ATTGATGATGATGAAGGTGG+TGG + chr1_4:72281187-72281206 Msa0183380:CDS 40.0%
TGGCTGTTACAATGCATTAG+GGG - chr1_4:72281315-72281334 None:intergenic 40.0%
GTGGCTGTTACAATGCATTA+GGG - chr1_4:72281316-72281335 None:intergenic 40.0%
TGTGGCTGTTACAATGCATT+AGG - chr1_4:72281317-72281336 None:intergenic 40.0%
TGCATTGTAACAGCCACATT+TGG + chr1_4:72281319-72281338 Msa0183380:intron 40.0%
! TTCTAAGAGTCTAACGTCTG+AGG + chr1_4:72281508-72281527 Msa0183380:intron 40.0%
ATGGTATACCTTGGACAGTT+GGG - chr1_4:72281830-72281849 None:intergenic 40.0%
AATGGTATACCTTGGACAGT+TGG - chr1_4:72281831-72281850 None:intergenic 40.0%
AGCAACTAAGTAAGCAACCA+GGG - chr1_4:72281859-72281878 None:intergenic 40.0%
TTGGTACTCGTTGAAAGAGA+AGG - chr1_4:72282005-72282024 None:intergenic 40.0%
! TTTTGTTAGCTGCACCTGTA+TGG + chr1_4:72282067-72282086 Msa0183380:intron 40.0%
AGAAAGGTCAGCTACAACAT+AGG - chr1_4:72282303-72282322 None:intergenic 40.0%
ACTTCTGCATGAGTAATGCT+CGG - chr1_4:72282354-72282373 None:intergenic 40.0%
AGCATTACTCATGCAGAAGT+TGG + chr1_4:72282354-72282373 Msa0183380:CDS 40.0%
ATGAAAACCAAAATGGCAGG+GGG - chr1_4:72282407-72282426 None:intergenic 40.0%
AGGCCTTAATCTACAAGCAA+TGG + chr1_4:72282513-72282532 Msa0183380:CDS 40.0%
GGCCTTAATCTACAAGCAAT+GGG + chr1_4:72282514-72282533 Msa0183380:CDS 40.0%
GACTTGTCAGCATTTGAACT+TGG - chr1_4:72282600-72282619 None:intergenic 40.0%
GGGGAAAACTTTCCAAGTAT+AGG - chr1_4:72282710-72282729 None:intergenic 40.0%
AAGCAGAATGCTCCAAGTTT+GGG + chr1_4:72282816-72282835 Msa0183380:CDS 40.0%
!! TTATTGTTTCTGTGAGCAGG+AGG + chr1_4:72282927-72282946 Msa0183380:intron 40.0%
CTGTGCACTTATTGCAGATT+GGG - chr1_4:72282987-72283006 None:intergenic 40.0%
AATCTGCAATAAGTGCACAG+CGG + chr1_4:72282987-72283006 Msa0183380:CDS 40.0%
TGCAAACCATCTTCCATGTA+AGG - chr1_4:72283014-72283033 None:intergenic 40.0%
! TTACATGGAAGATGGTTTGC+AGG + chr1_4:72283013-72283032 Msa0183380:CDS 40.0%
AATCGATCCTCGTATAACTG+GGG - chr1_4:72283166-72283185 None:intergenic 40.0%
GAATCGATCCTCGTATAACT+GGG - chr1_4:72283167-72283186 None:intergenic 40.0%
!! CCAAGAACTCATTTGCTATC+TGG - chr1_4:72283190-72283209 None:intergenic 40.0%
CCAGATAGCAAATGAGTTCT+TGG + chr1_4:72283187-72283206 Msa0183380:exon 40.0%
GATAGCAAATGAGTTCTTGG+GGG + chr1_4:72283190-72283209 Msa0183380:exon 40.0%
AATCAAAGTTCATGTGGGTG+GGG - chr1_4:72283317-72283336 None:intergenic 40.0%
! TTGCCATACTTCACCTGTTT+TGG + chr1_4:72283387-72283406 Msa0183380:three_prime_UTR 40.0%
! TGCCATACTTCACCTGTTTT+GGG + chr1_4:72283388-72283407 Msa0183380:three_prime_UTR 40.0%
ATCAATGTAATTGCCGTCAG+AGG - chr1_4:72283492-72283511 None:intergenic 40.0%
! CGTAATTGGTCTGTACTATG+TGG + chr1_4:72283524-72283543 Msa0183380:three_prime_UTR 40.0%
! CCGAATGCTTTTCGTTACCA+TGG - chr1_4:72273130-72273149 None:intergenic 45.0%
!! GGTAACGAAAAGCATTCGGT+CGG + chr1_4:72273131-72273150 Msa0183380:five_prime_UTR 45.0%
! TCTCTTTTCCTCGCTCAACA+AGG + chr1_4:72273208-72273227 Msa0183380:five_prime_UTR 45.0%
TAGAGATGGAGACAAGGAGA+AGG + chr1_4:72273549-72273568 Msa0183380:CDS 45.0%
AAGAGAGACAGGGATAGAGA+CGG + chr1_4:72273607-72273626 Msa0183380:CDS 45.0%
! ACGGTGAAGAGAAGCATAGA+AGG + chr1_4:72273626-72273645 Msa0183380:CDS 45.0%
! CGGTGAAGAGAAGCATAGAA+GGG + chr1_4:72273627-72273646 Msa0183380:CDS 45.0%
!! CAGCGAAGCAAAAGCATTTC+TGG + chr1_4:72273727-72273746 Msa0183380:CDS 45.0%
ATAGAGAGATGAGTCGTGAC+AGG + chr1_4:72273767-72273786 Msa0183380:CDS 45.0%
TAGAGAGATGAGTCGTGACA+GGG + chr1_4:72273768-72273787 Msa0183380:CDS 45.0%
CGTGACAGGGTAAATAGAGA+TGG + chr1_4:72273781-72273800 Msa0183380:CDS 45.0%
ATGGAGAAAGAGGAATGGCA+AGG + chr1_4:72273800-72273819 Msa0183380:CDS 45.0%
TGGAGAAAGAGGAATGGCAA+GGG + chr1_4:72273801-72273820 Msa0183380:CDS 45.0%
AGGAATGGCAAGGGACTTAA+AGG + chr1_4:72273810-72273829 Msa0183380:CDS 45.0%
TGCAGGAACTTTAATGCACC+GGG - chr1_4:72274370-72274389 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG - chr1_4:72274416-72274435 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG - chr1_4:72274419-72274438 None:intergenic 45.0%
GTTGTTGTCACGTGACTGAA+AGG - chr1_4:72274492-72274511 None:intergenic 45.0%
ACAACTTTACCGTTGTGCCA+AGG + chr1_4:72274507-72274526 Msa0183380:intron 45.0%
! GCATTTGGACCTTGGTAGTT+AGG + chr1_4:72274879-72274898 Msa0183380:intron 45.0%
! TTTGGACCTTGGTAGTTAGG+TGG + chr1_4:72274882-72274901 Msa0183380:intron 45.0%
CATATGCCACCTAACTACCA+AGG - chr1_4:72274891-72274910 None:intergenic 45.0%
CTACTGCGGGAATCATTGTA+TGG + chr1_4:72275185-72275204 Msa0183380:intron 45.0%
TTCAACGGTCTTGACTCTTG+AGG + chr1_4:72275279-72275298 Msa0183380:intron 45.0%
!! TAGATTTTGGCAATTGGGCC+AGG + chr1_4:72275320-72275339 Msa0183380:intron 45.0%
CAGATTAGATGTACTCCGGA+AGG - chr1_4:72275383-72275402 None:intergenic 45.0%
CATTGCAATAGTTTGGGGGT+GGG + chr1_4:72275411-72275430 Msa0183380:intron 45.0%
ATTGCAATAGTTTGGGGGTG+GGG + chr1_4:72275412-72275431 Msa0183380:intron 45.0%
TGTTGCAGAAATGCTGGTGA+GGG + chr1_4:72275522-72275541 Msa0183380:intron 45.0%
AAATGCTGGTGAGGGAGTAA+TGG + chr1_4:72275530-72275549 Msa0183380:intron 45.0%
AATGCTGGTGAGGGAGTAAT+GGG + chr1_4:72275531-72275550 Msa0183380:intron 45.0%
! GGCTAGCCATAAACAACAGA+CGG - chr1_4:72275799-72275818 None:intergenic 45.0%
! TAATGTTGCAATGGAGCACC+CGG - chr1_4:72275822-72275841 None:intergenic 45.0%
ATGGCAATTCAAGAGGGTGA+GGG - chr1_4:72276141-72276160 None:intergenic 45.0%
GGATGGATGGCAATTCAAGA+GGG - chr1_4:72276147-72276166 None:intergenic 45.0%
TGGATGGATGGCAATTCAAG+AGG - chr1_4:72276148-72276167 None:intergenic 45.0%
GAATTGCCATCCATCCAAGT+TGG + chr1_4:72276151-72276170 Msa0183380:intron 45.0%
AACAGCATTGCCAACTTGGA+TGG - chr1_4:72276164-72276183 None:intergenic 45.0%
TACCATTTCCCACAATCTCC+AGG + chr1_4:72276266-72276285 Msa0183380:intron 45.0%
AACCTGGAGATTGTGGGAAA+TGG - chr1_4:72276271-72276290 None:intergenic 45.0%
AGGCCACTGTCAAGTGAAAT+CGG + chr1_4:72276377-72276396 Msa0183380:intron 45.0%
!! GCAAACCTTTGGAGCAGTTT+AGG - chr1_4:72276530-72276549 None:intergenic 45.0%
TATGAGTTCTTCTCAAGGGC+TGG + chr1_4:72276796-72276815 Msa0183380:CDS 45.0%
!! ACTGTGGTTGGCATTGATCT+TGG + chr1_4:72276885-72276904 Msa0183380:intron 45.0%
ATTTCCAGGTGCGAGATGTT+CGG + chr1_4:72277260-72277279 Msa0183380:intron 45.0%
GCGAGATGTTCGGTTGATTA+TGG + chr1_4:72277270-72277289 Msa0183380:CDS 45.0%
! CTTTCAGGTCAACCTCTTCT+TGG + chr1_4:72278475-72278494 Msa0183380:CDS 45.0%
! ATCACTGGTTGACCAAGAAG+AGG - chr1_4:72278490-72278509 None:intergenic 45.0%
TCTTCTTGGTCAACCAGTGA+TGG + chr1_4:72278489-72278508 Msa0183380:CDS 45.0%
CTACAGCATCTGTTGCTAAC+GGG + chr1_4:72278548-72278567 Msa0183380:CDS 45.0%
! AACGGGCCTTCTGGAAATTT+AGG + chr1_4:72278565-72278584 Msa0183380:CDS 45.0%
TTCTTGCACCCCCAGAATAA+GGG - chr1_4:72278591-72278610 None:intergenic 45.0%
ATGCGCCAGCAAATTATCCA+AGG - chr1_4:72278691-72278710 None:intergenic 45.0%
!! CAATGTCATCAAGAGGCATC+TGG - chr1_4:72278950-72278969 None:intergenic 45.0%
! CAGATGCCTCTTGATGACAT+TGG + chr1_4:72278948-72278967 Msa0183380:CDS 45.0%
CAATGCCCAATGTCATCAAG+AGG - chr1_4:72278957-72278976 None:intergenic 45.0%
! GATGACATTGGGCATTGCAA+AGG + chr1_4:72278960-72278979 Msa0183380:CDS 45.0%
!!! CAAAGGTTTTGGCTTTGTGC+AGG + chr1_4:72278977-72278996 Msa0183380:CDS 45.0%
ATTTGGACCCAACCGAGTAT+TGG + chr1_4:72279135-72279154 Msa0183380:intron 45.0%
TTTGGACCCAACCGAGTATT+GGG + chr1_4:72279136-72279155 Msa0183380:intron 45.0%
TAACACCCCAATACTCGGTT+GGG - chr1_4:72279145-72279164 None:intergenic 45.0%
TTAACACCCCAATACTCGGT+TGG - chr1_4:72279146-72279165 None:intergenic 45.0%
TCAGAGCTTGAATAGCCAGT+TGG + chr1_4:72279712-72279731 Msa0183380:CDS 45.0%
AATAGCCAGTTGGAGATTGG+TGG + chr1_4:72279722-72279741 Msa0183380:CDS 45.0%
ATAGCCAGTTGGAGATTGGT+GGG + chr1_4:72279723-72279742 Msa0183380:CDS 45.0%
! AATTTTCCGAGTGTAGGCTG+GGG - chr1_4:72280383-72280402 None:intergenic 45.0%
! GAATTTTCCGAGTGTAGGCT+GGG - chr1_4:72280384-72280403 None:intergenic 45.0%
! AGAATTTTCCGAGTGTAGGC+TGG - chr1_4:72280385-72280404 None:intergenic 45.0%
! TTCCATGTAATGGAGAGGTG+GGG - chr1_4:72280427-72280446 None:intergenic 45.0%
! AGGTAGCAATTGGAGAGTGT+GGG - chr1_4:72280467-72280486 None:intergenic 45.0%
CAGAAAGGACAGGTAGCAAT+TGG - chr1_4:72280477-72280496 None:intergenic 45.0%
TGGGAGAGAATATACAGGGA+GGG - chr1_4:72280505-72280524 None:intergenic 45.0%
ATGGGAGAGAATATACAGGG+AGG - chr1_4:72280506-72280525 None:intergenic 45.0%
! GGAGGAAAAGGCATAGGAAT+GGG - chr1_4:72280524-72280543 None:intergenic 45.0%
! AGGAGGAAAAGGCATAGGAA+TGG - chr1_4:72280525-72280544 None:intergenic 45.0%
!! ACTTGTTAGCCCACTTTTCC+TGG + chr1_4:72280555-72280574 Msa0183380:intron 45.0%
GAACAATGCACCAGGAAAAG+TGG - chr1_4:72280568-72280587 None:intergenic 45.0%
GTGCATTGTTCTCCTCATGT+TGG + chr1_4:72280577-72280596 Msa0183380:intron 45.0%
AATAAGCACAGAGATGGTGC+TGG - chr1_4:72280609-72280628 None:intergenic 45.0%
! TTGAACTTGTTCTCGGCAAG+TGG + chr1_4:72281034-72281053 Msa0183380:intron 45.0%
! TCTGGAATGCAAGAATTCGG+CGG + chr1_4:72281151-72281170 Msa0183380:CDS 45.0%
CAAGAATTCGGCGGAAATAC+TGG + chr1_4:72281160-72281179 Msa0183380:CDS 45.0%
!! TGATGATGAAGGTGGTGGAT+TGG + chr1_4:72281192-72281211 Msa0183380:CDS 45.0%
TACAATGCATTAGGGGAGCT+CGG - chr1_4:72281308-72281327 None:intergenic 45.0%
! ACCAAGTATGTTTGGGACAG+CGG - chr1_4:72281790-72281809 None:intergenic 45.0%
GGGCAACTAATGGTATACCT+TGG - chr1_4:72281839-72281858 None:intergenic 45.0%
AGGTATACCATTAGTTGCCC+TGG + chr1_4:72281839-72281858 Msa0183380:intron 45.0%
TAAGCAACCAGGGCAACTAA+TGG - chr1_4:72281849-72281868 None:intergenic 45.0%
CAGCAACTAAGTAAGCAACC+AGG - chr1_4:72281860-72281879 None:intergenic 45.0%
! ATGAAGCACTCACCATCACA+GGG - chr1_4:72282228-72282247 None:intergenic 45.0%
! TATGAAGCACTCACCATCAC+AGG - chr1_4:72282229-72282248 None:intergenic 45.0%
CTTCTGCATGAGTAATGCTC+GGG - chr1_4:72282353-72282372 None:intergenic 45.0%
!! TTGCAGTATGGTTGGTTTGC+TGG + chr1_4:72282468-72282487 Msa0183380:intron 45.0%
!! TGCAGTATGGTTGGTTTGCT+GGG + chr1_4:72282469-72282488 Msa0183380:intron 45.0%
!! GCGCCGATTGTATCAATAGT+AGG - chr1_4:72282622-72282641 None:intergenic 45.0%
GTTTGATCCGGAAAATGAGG+TGG + chr1_4:72282672-72282691 Msa0183380:intron 45.0%
TTGGCATTGTGTGATGCAGA+AGG + chr1_4:72282757-72282776 Msa0183380:intron 45.0%
GAAGCAGAATGCTCCAAGTT+TGG + chr1_4:72282815-72282834 Msa0183380:CDS 45.0%
GCTGTGCACTTATTGCAGAT+TGG - chr1_4:72282988-72283007 None:intergenic 45.0%
ATCTGCAATAAGTGCACAGC+GGG + chr1_4:72282988-72283007 Msa0183380:CDS 45.0%
GGAATCGATCCTCGTATAAC+TGG - chr1_4:72283168-72283187 None:intergenic 45.0%
! GCCATACTTCACCTGTTTTG+GGG + chr1_4:72283389-72283408 Msa0183380:three_prime_UTR 45.0%
!! CCATACTTCACCTGTTTTGG+GGG + chr1_4:72283390-72283409 Msa0183380:three_prime_UTR 45.0%
!! CATACTTCACCTGTTTTGGG+GGG + chr1_4:72283391-72283410 Msa0183380:three_prime_UTR 45.0%
AACCAATATCCCCCCAAAAC+AGG - chr1_4:72283403-72283422 None:intergenic 45.0%
!! TTAAGTTAAATAAATAATAA+AGG - chr1_4:72274546-72274565 None:intergenic 5.0%
!!! TTTTTGTTTTTATTTATAAA+AGG + chr1_4:72276195-72276214 Msa0183380:intron 5.0%
!! TAAAGAATAAAATTTAATTA+AGG - chr1_4:72277992-72278011 None:intergenic 5.0%
!! TATAGAAATAAAATATAATT+TGG + chr1_4:72279200-72279219 Msa0183380:intron 5.0%
GTTCTTCTCGTCGTCGTTCA+CGG + chr1_4:72273524-72273543 Msa0183380:CDS 50.0%
ACGGTCTAGAGATGGAGACA+AGG + chr1_4:72273543-72273562 Msa0183380:CDS 50.0%
!! GTTCTAAGGGCAATGGGGAT+AGG + chr1_4:72273584-72273603 Msa0183380:CDS 50.0%
ATGGGGATAGGAAGAGAGAC+AGG + chr1_4:72273596-72273615 Msa0183380:CDS 50.0%
TGGGGATAGGAAGAGAGACA+GGG + chr1_4:72273597-72273616 Msa0183380:CDS 50.0%
GAGTGAGAGTGAACGAGAGA+AGG + chr1_4:72273696-72273715 Msa0183380:CDS 50.0%
TCACGTGACTGAAAGGTCAC+GGG - chr1_4:72274485-72274504 None:intergenic 50.0%
GTCACGTGACTGAAAGGTCA+CGG - chr1_4:72274486-72274505 None:intergenic 50.0%
TTGAGCGATAGCTGGGCATT+TGG + chr1_4:72274864-72274883 Msa0183380:intron 50.0%
ATAGCTGGGCATTTGGACCT+TGG + chr1_4:72274871-72274890 Msa0183380:intron 50.0%
CTGCGGGAATCATTGTATGG+TGG + chr1_4:72275188-72275207 Msa0183380:intron 50.0%
GCATTGCAATAGTTTGGGGG+TGG + chr1_4:72275410-72275429 Msa0183380:intron 50.0%
TTGCAATAGTTTGGGGGTGG+GGG + chr1_4:72275413-72275432 Msa0183380:intron 50.0%
GCAACTAAGTTCAAAGGGGG+AGG - chr1_4:72275486-72275505 None:intergenic 50.0%
CTGTTGCAGAAATGCTGGTG+AGG + chr1_4:72275521-72275540 Msa0183380:intron 50.0%
! CTGTTGTTTATGGCTAGCCC+CGG + chr1_4:72275800-72275819 Msa0183380:intron 50.0%
! TGTTGTTTATGGCTAGCCCC+GGG + chr1_4:72275801-72275820 Msa0183380:intron 50.0%
! AATGTTGCAATGGAGCACCC+GGG - chr1_4:72275821-72275840 None:intergenic 50.0%
GCACCTAGCTGTCATTGATG+TGG + chr1_4:72275868-72275887 Msa0183380:intron 50.0%
GATGGCAATTCAAGAGGGTG+AGG - chr1_4:72276142-72276161 None:intergenic 50.0%
GCATTGCCAACTTGGATGGA+TGG - chr1_4:72276160-72276179 None:intergenic 50.0%
TGGGAACAGCATTGCCAACT+TGG - chr1_4:72276168-72276187 None:intergenic 50.0%
GGCCACTGTCAAGTGAAATC+GGG + chr1_4:72276378-72276397 Msa0183380:intron 50.0%
AGCCCGATTTCACTTGACAG+TGG - chr1_4:72276383-72276402 None:intergenic 50.0%
!! CTGAAAGCGCTATTGCCATG+GGG - chr1_4:72278462-72278481 None:intergenic 50.0%
!! CCTGAAAGCGCTATTGCCAT+GGG - chr1_4:72278463-72278482 None:intergenic 50.0%
!! ACCTGAAAGCGCTATTGCCA+TGG - chr1_4:72278464-72278483 None:intergenic 50.0%
! ACCAGTGATGGTGAAGCCAT+CGG + chr1_4:72278501-72278520 Msa0183380:CDS 50.0%
CTTCTTGCACCCCCAGAATA+AGG - chr1_4:72278592-72278611 None:intergenic 50.0%
! CTTATTCTGGGGGTGCAAGA+AGG + chr1_4:72278590-72278609 Msa0183380:CDS 50.0%
GGTGCAAGAAGGCTCTATGT+TGG + chr1_4:72278601-72278620 Msa0183380:CDS 50.0%
!! AGCATAAAGGCACTCAGTCC+AGG - chr1_4:72278797-72278816 None:intergenic 50.0%
! TTGGACCCAACCGAGTATTG+GGG + chr1_4:72279137-72279156 Msa0183380:intron 50.0%
GATTGGTGGGAGGACAATCA+AGG + chr1_4:72279736-72279755 Msa0183380:CDS 50.0%
! GGTAGCAATTGGAGAGTGTG+GGG - chr1_4:72280466-72280485 None:intergenic 50.0%
CAGGTAGCAATTGGAGAGTG+TGG - chr1_4:72280468-72280487 None:intergenic 50.0%
GGAGAGAATATACAGGGAGG+GGG - chr1_4:72280503-72280522 None:intergenic 50.0%
GGGAGAGAATATACAGGGAG+GGG - chr1_4:72280504-72280523 None:intergenic 50.0%
! TGAGCAGGAGGAAAAGGCAT+AGG - chr1_4:72280530-72280549 None:intergenic 50.0%
CATGAGGAGAACAATGCACC+AGG - chr1_4:72280576-72280595 None:intergenic 50.0%
TGCTGGTGTAACCCAACATG+AGG - chr1_4:72280592-72280611 None:intergenic 50.0%
! AGTATGTTTGGGACAGCGGT+GGG - chr1_4:72281786-72281805 None:intergenic 50.0%
! AAGTATGTTTGGGACAGCGG+TGG - chr1_4:72281787-72281806 None:intergenic 50.0%
ACCGCTGTCCCAAACATACT+TGG + chr1_4:72281786-72281805 Msa0183380:intron 50.0%
CCATCACAGGGTCTAAGAGT+TGG - chr1_4:72282216-72282235 None:intergenic 50.0%
CCAACTCTTAGACCCTGTGA+TGG + chr1_4:72282213-72282232 Msa0183380:intron 50.0%
CATGAGTAATGCTCGGGAAG+AGG - chr1_4:72282347-72282366 None:intergenic 50.0%
ATGCAGAAGTTGGATCGCAG+TGG + chr1_4:72282364-72282383 Msa0183380:CDS 50.0%
ATCGCAGTGGCATTGCATCA+AGG + chr1_4:72282377-72282396 Msa0183380:CDS 50.0%
!! AGGTTTTCCCCCTGCCATTT+TGG + chr1_4:72282397-72282416 Msa0183380:intron 50.0%
GTGGGAATAAGAGCTACTGC+TGG - chr1_4:72282547-72282566 None:intergenic 50.0%
GTAGGTTCCCCAGTTATACG+AGG + chr1_4:72283156-72283175 Msa0183380:intron 50.0%
GGGGGTCCATTATCAAGTAG+TGG + chr1_4:72283208-72283227 Msa0183380:three_prime_UTR 50.0%
CCCCCAAAACAGGTGAAGTA+TGG - chr1_4:72283393-72283412 None:intergenic 50.0%
!!! CACCTGTTTTGGGGGGATAT+TGG + chr1_4:72283398-72283417 Msa0183380:three_prime_UTR 50.0%
GATGCAGACCTTGTTGAGCG+AGG - chr1_4:72273219-72273238 None:intergenic 55.0%
CGTCGTTCACGGTCTAGAGA+TGG + chr1_4:72273535-72273554 Msa0183380:CDS 55.0%
GAAGGGAGAGAGACAGAGAC+CGG + chr1_4:72273644-72273663 Msa0183380:CDS 55.0%
AAGGGAGAGAGACAGAGACC+GGG + chr1_4:72273645-72273664 Msa0183380:CDS 55.0%
TTCCTGCATACACAGGGTCC+AGG + chr1_4:72274382-72274401 Msa0183380:intron 55.0%
TTCCTGGACCCTGTGTATGC+AGG - chr1_4:72274387-72274406 None:intergenic 55.0%
TGCATACACAGGGTCCAGGA+AGG + chr1_4:72274386-72274405 Msa0183380:intron 55.0%
GCATACACAGGGTCCAGGAA+GGG + chr1_4:72274387-72274406 Msa0183380:intron 55.0%
CATACACAGGGTCCAGGAAG+GGG + chr1_4:72274388-72274407 Msa0183380:intron 55.0%
! ATGTTGCAATGGAGCACCCG+GGG - chr1_4:72275820-72275839 None:intergenic 55.0%
TGGTGTCTCATGCTGTCCTG+TGG + chr1_4:72275961-72275980 Msa0183380:intron 55.0%
ACAGTGGCCTGCATGGAACT+AGG - chr1_4:72276367-72276386 None:intergenic 55.0%
TCACTTGACAGTGGCCTGCA+TGG - chr1_4:72276374-72276393 None:intergenic 55.0%
! GTTCTTCTCAAGGGCTGGCA+AGG + chr1_4:72276801-72276820 Msa0183380:CDS 55.0%
TCAACCGAACATCTCGCACC+TGG - chr1_4:72277267-72277286 None:intergenic 55.0%
CGATGTCATGTCTGTCCCCA+TGG + chr1_4:72278444-72278463 Msa0183380:CDS 55.0%
CCCATGGCAATAGCGCTTTC+AGG + chr1_4:72278460-72278479 Msa0183380:CDS 55.0%
TCCGATGGCTTCACCATCAC+TGG - chr1_4:72278505-72278524 None:intergenic 55.0%
! TCTGTTGCTAACGGGCCTTC+TGG + chr1_4:72278556-72278575 Msa0183380:CDS 55.0%
TCCTCCCACCAATCTCCAAC+TGG - chr1_4:72279730-72279749 None:intergenic 55.0%
TTCTCTCCCCAGCCTACACT+CGG + chr1_4:72280374-72280393 Msa0183380:intron 55.0%
! TGTAATGGAGAGGTGGGGCT+TGG - chr1_4:72280422-72280441 None:intergenic 55.0%
AGCCCCACCTCTCCATTACA+TGG + chr1_4:72280422-72280441 Msa0183380:intron 55.0%
! GGAGAGTGTGGGGAGAGAAA+TGG - chr1_4:72280456-72280475 None:intergenic 55.0%
GAGGGGGTAACAGAAAGGAC+AGG - chr1_4:72280487-72280506 None:intergenic 55.0%
ACAGGGAGGGGGTAACAGAA+AGG - chr1_4:72280492-72280511 None:intergenic 55.0%
! GCCTTTTCCTCCTGCTCACA+CGG + chr1_4:72280532-72280551 Msa0183380:intron 55.0%
TCCGTGTGAGCAGGAGGAAA+AGG - chr1_4:72280536-72280555 None:intergenic 55.0%
AACAAGTCCGTGTGAGCAGG+AGG - chr1_4:72280542-72280561 None:intergenic 55.0%
GCTAACAAGTCCGTGTGAGC+AGG - chr1_4:72280545-72280564 None:intergenic 55.0%
!! TGCTCGGGAAGAGGCATTCA+AGG - chr1_4:72282338-72282357 None:intergenic 55.0%
GTAGCTCTTATTCCCACCCC+AGG + chr1_4:72282550-72282569 Msa0183380:CDS 55.0%
CTTATTCCCACCCCAGGAGT+TGG + chr1_4:72282556-72282575 Msa0183380:CDS 55.0%
ACCTGGCATTCCAACTCCTG+GGG - chr1_4:72282569-72282588 None:intergenic 55.0%
CACCTGGCATTCCAACTCCT+GGG - chr1_4:72282570-72282589 None:intergenic 55.0%
TGAACTTGGAGACCTCCACC+TGG - chr1_4:72282586-72282605 None:intergenic 55.0%
AGCGGGCCTTACATGGAAGA+TGG + chr1_4:72283005-72283024 Msa0183380:CDS 55.0%
! CAAATGGTGGGACCCCTTCC+TGG - chr1_4:72274403-72274422 None:intergenic 60.0%
CAGGAAGGGGTCCCACCATT+TGG + chr1_4:72274401-72274420 Msa0183380:intron 60.0%
AAGGGGGAGCCTTGGCACAA+CGG - chr1_4:72274519-72274538 None:intergenic 60.0%
AAGGATGGAAGGGGGAGCCT+TGG - chr1_4:72274527-72274546 None:intergenic 60.0%
GCCAGTTGGAGATTGGTGGG+AGG + chr1_4:72279726-72279745 Msa0183380:CDS 60.0%
! ATGGAGAGGTGGGGCTTGGT+CGG - chr1_4:72280418-72280437 None:intergenic 60.0%
! TTTGGGACAGCGGTGGGATG+AGG - chr1_4:72281780-72281799 None:intergenic 60.0%
GGCATTCCAACTCCTGGGGT+GGG - chr1_4:72282565-72282584 None:intergenic 60.0%
TGGCATTCCAACTCCTGGGG+TGG - chr1_4:72282566-72282585 None:intergenic 60.0%
ACCCCAGGAGTTGGAATGCC+AGG + chr1_4:72282565-72282584 Msa0183380:CDS 60.0%
CCACCTGGCATTCCAACTCC+TGG - chr1_4:72282571-72282590 None:intergenic 60.0%
CCAGGAGTTGGAATGCCAGG+TGG + chr1_4:72282568-72282587 Msa0183380:CDS 60.0%
GGAGTTGGAATGCCAGGTGG+AGG + chr1_4:72282571-72282590 Msa0183380:CDS 60.0%
! TCTGTGAGCAGGAGGAGTGC+CGG + chr1_4:72282935-72282954 Msa0183380:intron 60.0%
AGTGCACAGCGGGCCTTACA+TGG + chr1_4:72282998-72283017 Msa0183380:CDS 60.0%
! TGGAGAGGTGGGGCTTGGTC+GGG - chr1_4:72280417-72280436 None:intergenic 65.0%
GGGACACAAGACGTGCCGTG+TGG - chr1_4:72281699-72281718 None:intergenic 65.0%
! AGAGGTGGGGCTTGGTCGGG+TGG - chr1_4:72280414-72280433 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 72272993 72283550 72272993 ID=Msa0183380;Name=Msa0183380
chr1_4 mRNA 72272993 72283550 72272993 ID=Msa0183380-mRNA-1;Parent=Msa0183380;Name=Msa0183380-mRNA-1;_AED=0.20;_eAED=0.20;_QI=278|1|1|1|0.92|0.85|14|349|563
chr1_4 exon 72272993 72273229 72272993 ID=Msa0183380-mRNA-1:exon:24417;Parent=Msa0183380-mRNA-1
chr1_4 exon 72273320 72273851 72273320 ID=Msa0183380-mRNA-1:exon:24418;Parent=Msa0183380-mRNA-1
chr1_4 exon 72276596 72276677 72276596 ID=Msa0183380-mRNA-1:exon:24419;Parent=Msa0183380-mRNA-1
chr1_4 exon 72276766 72276822 72276766 ID=Msa0183380-mRNA-1:exon:24420;Parent=Msa0183380-mRNA-1
chr1_4 exon 72277268 72277323 72277268 ID=Msa0183380-mRNA-1:exon:24421;Parent=Msa0183380-mRNA-1
chr1_4 exon 72278429 72278663 72278429 ID=Msa0183380-mRNA-1:exon:24422;Parent=Msa0183380-mRNA-1
chr1_4 exon 72278915 72278998 72278915 ID=Msa0183380-mRNA-1:exon:24423;Parent=Msa0183380-mRNA-1
chr1_4 exon 72279683 72279757 72279683 ID=Msa0183380-mRNA-1:exon:24424;Parent=Msa0183380-mRNA-1
chr1_4 exon 72281130 72281213 72281130 ID=Msa0183380-mRNA-1:exon:24425;Parent=Msa0183380-mRNA-1
chr1_4 exon 72282334 72282398 72282334 ID=Msa0183380-mRNA-1:exon:24426;Parent=Msa0183380-mRNA-1
chr1_4 exon 72282474 72282690 72282474 ID=Msa0183380-mRNA-1:exon:24427;Parent=Msa0183380-mRNA-1
chr1_4 exon 72282776 72282864 72282776 ID=Msa0183380-mRNA-1:exon:24428;Parent=Msa0183380-mRNA-1
chr1_4 exon 72282946 72283060 72282946 ID=Msa0183380-mRNA-1:exon:24429;Parent=Msa0183380-mRNA-1
chr1_4 exon 72283160 72283550 72283160 ID=Msa0183380-mRNA-1:exon:24430;Parent=Msa0183380-mRNA-1
chr1_4 five_prime_UTR 72272993 72273229 72272993 ID=Msa0183380-mRNA-1:five_prime_utr;Parent=Msa0183380-mRNA-1
chr1_4 five_prime_UTR 72273320 72273360 72273320 ID=Msa0183380-mRNA-1:five_prime_utr;Parent=Msa0183380-mRNA-1
chr1_4 CDS 72273361 72273851 72273361 ID=Msa0183380-mRNA-1:cds;Parent=Msa0183380-mRNA-1
chr1_4 CDS 72276596 72276677 72276596 ID=Msa0183380-mRNA-1:cds;Parent=Msa0183380-mRNA-1
chr1_4 CDS 72276766 72276822 72276766 ID=Msa0183380-mRNA-1:cds;Parent=Msa0183380-mRNA-1
chr1_4 CDS 72277268 72277323 72277268 ID=Msa0183380-mRNA-1:cds;Parent=Msa0183380-mRNA-1
chr1_4 CDS 72278429 72278663 72278429 ID=Msa0183380-mRNA-1:cds;Parent=Msa0183380-mRNA-1
chr1_4 CDS 72278915 72278998 72278915 ID=Msa0183380-mRNA-1:cds;Parent=Msa0183380-mRNA-1
chr1_4 CDS 72279683 72279757 72279683 ID=Msa0183380-mRNA-1:cds;Parent=Msa0183380-mRNA-1
chr1_4 CDS 72281130 72281213 72281130 ID=Msa0183380-mRNA-1:cds;Parent=Msa0183380-mRNA-1
chr1_4 CDS 72282334 72282398 72282334 ID=Msa0183380-mRNA-1:cds;Parent=Msa0183380-mRNA-1
chr1_4 CDS 72282474 72282690 72282474 ID=Msa0183380-mRNA-1:cds;Parent=Msa0183380-mRNA-1
chr1_4 CDS 72282776 72282864 72282776 ID=Msa0183380-mRNA-1:cds;Parent=Msa0183380-mRNA-1
chr1_4 CDS 72282946 72283060 72282946 ID=Msa0183380-mRNA-1:cds;Parent=Msa0183380-mRNA-1
chr1_4 CDS 72283160 72283201 72283160 ID=Msa0183380-mRNA-1:cds;Parent=Msa0183380-mRNA-1
chr1_4 three_prime_UTR 72283202 72283550 72283202 ID=Msa0183380-mRNA-1:three_prime_utr;Parent=Msa0183380-mRNA-1
Gene Sequence

>Msa0183380

ATGGAATTTGATGAGTATGATTATTTAGAGAAAACTGTTCAAAATTCTGAACCTAAGAATGGTGTGGAAAAGACTGTGAAATCTGATGATAGAGTTCATAGTCGAAACTCAAAGGATGATGATGATGTTGATCATTGGTTCAAGCATTCAAAATCTAGAGATGGTTCTTCTCGTCGTCGTTCACGGTCTAGAGATGGAGACAAGGAGAAGGTTCAACATAGAAGTTCTAAGGGCAATGGGGATAGGAAGAGAGACAGGGATAGAGACGGTGAAGAGAAGCATAGAAGGGAGAGAGACAGAGACCGGGATGTTGAAAGAGATAGAAGGAATCAAGGGAGTGAGAGTGAACGAGAGAAGGAGCGCTCTCAGCGAAGCAAAAGCATTTCTGGAAGGCATGATAGCAGAGATAGAGAGATGAGTCGTGACAGGGTAAATAGAGATGGAGAAAGAGGAATGGCAAGGGACTTAAAGGAACCAGATAGAGAAAACAGACGGCATAAAGAGAAAAAGGAAGAAGCAGCAGAACCTGAGATTGATCCTGAAAGAGATCAAAGAACTGTGTTTGCTTATCAGATTTCTCTTAAAGCGGATGATAGAGACGTTTATGAGTTCTTCTCAAGGGCTGGCAAGGTGCGAGATGTTCGGTTGATTATGGACCGCAATTCAAGACGTTCTAAAGGTGTTGGGTATATTGAGTTCTACGATGTCATGTCTGTCCCCATGGCAATAGCGCTTTCAGGTCAACCTCTTCTTGGTCAACCAGTGATGGTGAAGCCATCGGAAGCAGAAAAGAATCTGGTTCAGTCTACAGCATCTGTTGCTAACGGGCCTTCTGGAAATTTAGGCCCTTATTCTGGGGGTGCAAGAAGGCTCTATGTTGGTAATCTGCATTCCAGTATTACTGAAGCTGATCTTCGTAGGGTGTTTGAAGCATTTGGTCAAGTTGAGCTAGTCCAGATGCCTCTTGATGACATTGGGCATTGCAAAGGTTTTGGCTTTGTGCAGTTTGCCCGCCTTGAAGATGCAAAAAATGCTCAGAGCTTGAATAGCCAGTTGGAGATTGGTGGGAGGACAATCAAGGTATCAGCTGTTACTGATCAATCTGGAATGCAAGAATTCGGCGGAAATACTGGTGATATTGATGATGATGAAGGTGGTGGATTGTCCTTGAATGCCTCTTCCCGAGCATTACTCATGCAGAAGTTGGATCGCAGTGGCATTGCATCAAGTATGGTTGGTTTGCTGGGAAATTCTGTTGTCAACAATACAGGCCTTAATCTACAAGCAATGGGAAACATACCAGCAGTAGCTCTTATTCCCACCCCAGGAGTTGGAATGCCAGGTGGAGGTCTCCAAGTTCAAATGCTGACAAGTCCTACTATTGATACAATCGGCGCTCCAAGTGAATGCTTATTGTTAAAGAATATGTTTGATCCGGAAAATGAGAAGGAACTAGACTTTGATTTGGATGTTAAAGAAGATGTTGAAGCAGAATGCTCCAAGTTTGGGAACTTAAAACATATATATGTTGATAAGAGGAGTGCCGGATTTGTCTACTTAAGATTTGAAAATACCCAATCTGCAATAAGTGCACAGCGGGCCTTACATGGAAGATGGTTTGCAGGAAAAATGATCACTGCAAGCTTTATGGTTCCCCAGTTATACGAGGATCGATTCCCAGATAGCAAATGA
Protein sequence

>Msa0183380

MEFDEYDYLEKTVQNSEPKNGVEKTVKSDDRVHSRNSKDDDDVDHWFKHSKSRDGSSRRRSRSRDGDKEKVQHRSSKGNGDRKRDRDRDGEEKHRRERDRDRDVERDRRNQGSESEREKERSQRSKSISGRHDSRDREMSRDRVNRDGERGMARDLKEPDRENRRHKEKKEEAAEPEIDPERDQRTVFAYQISLKADDRDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTASVANGPSGNLGPYSGGARRLYVGNLHSSITEADLRRVFEAFGQVELVQMPLDDIGHCKGFGFVQFARLEDAKNAQSLNSQLEIGGRTIKVSAVTDQSGMQEFGGNTGDIDDDEGGGLSLNASSRALLMQKLDRSGIASSMVGLLGNSVVNNTGLNLQAMGNIPAVALIPTPGVGMPGGGLQVQMLTSPTIDTIGAPSECLLLKNMFDPENEKELDFDLDVKEDVEAECSKFGNLKHIYVDKRSAGFVYLRFENTQSAISAQRALHGRWFAGKMITASFMVPQLYEDRFPDSK*