AlfalfaGEDB | Msa1438820

M. sativa cultivar zhongmu-4 / Msa1438820

KEGG: -
GO: GO:0003674 GO:0005488 GO:0030246
PFAM: PF14299.9

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1438820	XP_013457676.1	95.105	286	14	0	1	286	1	286	0.0	552

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1438820	sp\|Q9LN77\|P2A12_ARATH	68.030	269	82	3	16	282	25	291	6.17e-134	383

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1438820	A0A072UPT1	95.105	286	14	0	1	286	1	286	0.0	552

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0015100	Msa1438820	0.968301	1.753771e-128	-8.615850e-47
Msa0021490	Msa1438820	0.802793	4.740359e-49	-8.615850e-47
Msa0049770	Msa1438820	0.972481	7.760068e-135	-8.615850e-47
Msa0051200	Msa1438820	0.843133	1.689866e-58	-8.615850e-47
Msa0051460	Msa1438820	0.856474	3.140183e-62	-8.615850e-47
Msa0094940	Msa1438820	-0.814586	1.429083e-51	-8.615850e-47
Msa0101840	Msa1438820	0.846139	2.620605e-59	-8.615850e-47
Msa0111310	Msa1438820	0.805532	1.275815e-49	-8.615850e-47
Msa1370630	Msa1438820	0.829739	4.349914e-55	-8.615850e-47
Msa1371580	Msa1438820	0.814415	1.558729e-51	-8.615850e-47
Msa1375800	Msa1438820	0.805865	1.086126e-49	-8.615850e-47
Msa1377070	Msa1438820	0.845894	3.053848e-59	-8.615850e-47
Msa1379710	Msa1438820	0.815301	9.917506e-52	-8.615850e-47
Msa1424510	Msa1438820	0.802637	5.105158e-49	-8.615850e-47
Msa1438820	Msa1445250	0.808078	3.696183e-50	-8.615850e-47
Msa1438820	Msa1454860	0.813931	1.994012e-51	-8.615850e-47
Msa1438820	Msa1458550	0.835496	1.622497e-56	-8.615850e-47
Msa0607540	Msa1438820	0.810779	9.727721e-51	-8.615850e-47
Msa0610890	Msa1438820	0.815548	8.736149e-52	-8.615850e-47
Msa0640380	Msa1438820	0.872893	2.239832e-67	-8.615850e-47
Msa0641020	Msa1438820	0.814312	1.642965e-51	-8.615850e-47
Msa0647830	Msa1438820	0.822366	2.461917e-53	-8.615850e-47
Msa0650290	Msa1438820	0.804535	2.062088e-49	-8.615850e-47
Msa0663330	Msa1438820	0.809230	2.096558e-50	-8.615850e-47
Msa0664020	Msa1438820	0.806657	7.393742e-50	-8.615850e-47
Msa0678820	Msa1438820	0.865438	5.906440e-65	-8.615850e-47
Msa0690440	Msa1438820	0.811458	6.931907e-51	-8.615850e-47
Msa0718240	Msa1438820	0.804507	2.090057e-49	-8.615850e-47
Msa0722930	Msa1438820	0.846034	2.799077e-59	-8.615850e-47
Msa0723140	Msa1438820	0.856396	3.308978e-62	-8.615850e-47
Msa0724550	Msa1438820	0.816128	6.488014e-52	-8.615850e-47
Msa0724560	Msa1438820	0.808788	2.607029e-50	-8.615850e-47
Msa0765130	Msa1438820	0.815161	1.065004e-51	-8.615850e-47
Msa0828570	Msa1438820	0.807680	4.490933e-50	-8.615850e-47
Msa0143920	Msa1438820	0.856994	2.207528e-62	-8.615850e-47
Msa0178350	Msa1438820	0.820981	5.146122e-53	-8.615850e-47
Msa0178860	Msa1438820	-0.816301	5.934704e-52	-8.615850e-47
Msa0183380	Msa1438820	0.801548	8.547481e-49	-8.615850e-47
Msa0185640	Msa1438820	-0.828302	9.694140e-55	-8.615850e-47
Msa0198440	Msa1438820	0.805806	1.117140e-49	-8.615850e-47
Msa0226620	Msa1438820	-0.817483	3.221672e-52	-8.615850e-47
Msa1237260	Msa1438820	0.812179	4.830112e-51	-8.615850e-47
Msa1256540	Msa1438820	-0.819631	1.049468e-52	-8.615850e-47
Msa1258950	Msa1438820	0.840007	1.126724e-57	-8.615850e-47
Msa1296960	Msa1438820	-0.825605	4.280485e-54	-8.615850e-47
Msa1317710	Msa1438820	0.816598	5.091967e-52	-8.615850e-47
Msa1322190	Msa1438820	0.804640	1.960538e-49	-8.615850e-47
Msa1335970	Msa1438820	-0.810661	1.031594e-50	-8.615850e-47
Msa1340620	Msa1438820	0.816202	6.244786e-52	-8.615850e-47
Msa0366470	Msa1438820	0.808703	2.719246e-50	-8.615850e-47
Msa0379820	Msa1438820	0.809686	1.674088e-50	-8.615850e-47
Msa0427380	Msa1438820	-0.800227	1.590990e-48	-8.615850e-47
Msa0438050	Msa1438820	0.868841	4.837147e-66	-8.615850e-47
Msa0465680	Msa1438820	-0.807390	5.173867e-50	-8.615850e-47
Msa0982270	Msa1438820	0.802216	6.232990e-49	-8.615850e-47
Msa1000020	Msa1438820	0.821681	3.548537e-53	-8.615850e-47
Msa1054410	Msa1438820	0.852889	3.431390e-61	-8.615850e-47
Msa1079730	Msa1438820	-0.816209	6.223570e-52	-8.615850e-47
Msa1080790	Msa1438820	0.849085	4.055689e-60	-8.615850e-47
Msa1100480	Msa1438820	0.811541	6.648354e-51	-8.615850e-47
Msa0260270	Msa1438820	-0.814027	1.899165e-51	-8.615850e-47
Msa0278670	Msa1438820	0.808805	2.585297e-50	-8.615850e-47
Msa0295850	Msa1438820	0.805775	1.134377e-49	-8.615850e-47
Msa0327860	Msa1438820	0.800002	1.767831e-48	-8.615850e-47
Msa0334170	Msa1438820	0.807671	4.510173e-50	-8.615850e-47
Msa0342340	Msa1438820	-0.810401	1.174061e-50	-8.615850e-47
Msa1118930	Msa1438820	0.849186	3.800741e-60	-8.615850e-47
Msa1141250	Msa1438820	-0.839003	2.054235e-57	-8.615850e-47
Msa1148720	Msa1438820	0.819782	9.690952e-53	-8.615850e-47
Msa1148750	Msa1438820	0.817278	3.582608e-52	-8.615850e-47
Msa1168040	Msa1438820	-0.805167	1.521072e-49	-8.615850e-47
Msa1204980	Msa1438820	-0.825106	5.615250e-54	-8.615850e-47
Msa1205010	Msa1438820	-0.822286	2.569565e-53	-8.615850e-47
Msa1208180	Msa1438820	0.933592	1.483777e-95	-8.615850e-47
Msa1208340	Msa1438820	0.966822	1.946636e-126	-8.615850e-47
Msa1208710	Msa1438820	0.832983	6.922668e-56	-8.615850e-47
Msa0504410	Msa1438820	0.826584	2.504196e-54	-8.615850e-47
Msa0514130	Msa1438820	-0.805000	1.648906e-49	-8.615850e-47
Msa0527250	Msa1438820	0.814030	1.895999e-51	-8.615850e-47
Msa0540070	Msa1438820	0.800260	1.566766e-48	-8.615850e-47
Msa0543900	Msa1438820	0.870129	1.842532e-66	-8.615850e-47
Msa0553460	Msa1438820	0.829481	5.024469e-55	-8.615850e-47
Msa0599770	Msa1438820	0.866434	2.859924e-65	-8.615850e-47
Msa0843280	Msa1438820	0.850621	1.508539e-60	-8.615850e-47
Msa0848900	Msa1438820	0.811532	6.679441e-51	-8.615850e-47
Msa0919520	Msa1438820	0.811997	5.291691e-51	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1438820	MtrunA17_Chr4g0057281	95.105	286	14	0	1	286	1	286	0.0	552
Msa1438820	MtrunA17_Chr5g0397981	73.868	287	70	3	1	286	19	301	1.39e-158	443
Msa1438820	MtrunA17_Chr8g0350401	60.854	281	103	2	1	274	1	281	2.94e-126	361
Msa1438820	MtrunA17_Chr1g0203751	62.308	260	97	1	19	278	28	286	7.01e-121	347
Msa1438820	MtrunA17_Chr6g0472801	58.672	271	110	2	13	282	16	285	2.76e-117	338
Msa1438820	MtrunA17_Chr7g0265551	55.670	291	117	2	1	280	73	362	7.85e-113	330
Msa1438820	MtrunA17_Chr7g0272101	26.642	274	168	7	22	278	4	261	9.35e-29	110
Msa1438820	MtrunA17_Chr4g0010881	27.132	258	165	5	22	277	4	240	4.80e-27	105
Msa1438820	MtrunA17_Chr1g0192371	25.862	290	165	9	18	273	7	280	3.65e-22	93.2
Msa1438820	MtrunA17_Chr7g0272091	25.357	280	182	5	18	273	6	282	2.37e-21	91.3
Msa1438820	MtrunA17_Chr1g0189611	35.417	144	92	1	21	163	6	149	5.38e-21	89.7
Msa1438820	MtrunA17_Chr1g0189821	28.090	267	175	6	21	275	6	267	8.12e-21	89.4
Msa1438820	MtrunA17_Chr1g0189671	36.111	144	88	2	21	163	6	146	1.07e-20	89.4
Msa1438820	MtrunA17_Chr1g0189641	35.417	144	89	2	21	163	6	146	7.97e-20	87.0
Msa1438820	MtrunA17_Chr1g0189721	34.247	146	92	2	19	163	4	146	6.10e-19	84.3
Msa1438820	MtrunA17_Chr1g0189751	28.223	287	174	8	19	286	4	277	3.43e-18	82.8
Msa1438820	MtrunA17_Chr1g0203331	36.154	130	79	2	36	164	6	132	3.67e-18	81.6
Msa1438820	MtrunA17_Chr1g0189591	36.054	147	88	3	21	163	15	159	4.37e-18	82.4
Msa1438820	MtrunA17_Chr1g0203281	33.333	144	92	2	21	163	6	146	1.54e-17	80.5
Msa1438820	MtrunA17_Chr1g0189781	32.667	150	99	2	16	163	5	154	2.44e-17	80.1
Msa1438820	MtrunA17_Chr1g0189621	33.562	146	92	3	21	165	6	147	2.62e-17	79.7
Msa1438820	MtrunA17_Chr1g0189771	31.944	144	96	2	22	163	15	158	1.52e-15	73.2
Msa1438820	MtrunA17_Chr3g0097191	32.886	149	90	5	19	164	10	151	2.21e-15	74.3
Msa1438820	MtrunA17_Chr1g0190071	32.653	147	93	3	21	163	6	150	2.19e-14	71.6
Msa1438820	MtrunA17_Chr1g0189661	33.333	147	91	3	21	163	6	149	2.54e-13	68.9
Msa1438820	MtrunA17_Chr1g0189711	27.805	205	127	5	21	219	6	195	2.59e-12	65.9
Msa1438820	MtrunA17_Chr3g0095261	32.847	137	80	6	19	152	10	137	3.80e-12	65.5
Msa1438820	MtrunA17_Chr3g0078331	27.326	172	106	4	7	163	5	172	4.32e-11	62.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1438820	AT1G12710.1	68.030	269	82	3	16	282	25	291	6.27e-135	383
Msa1438820	AT3G61060.1	62.782	266	97	2	14	278	20	284	6.48e-127	363
Msa1438820	AT1G12710.2	58.842	311	82	4	16	282	25	333	3.21e-126	363
Msa1438820	AT3G61060.2	62.547	267	97	3	14	278	20	285	3.12e-125	359
Msa1438820	AT1G63090.1	65.769	260	86	2	16	274	23	280	1.20e-122	352
Msa1438820	AT5G52120.1	52.174	276	127	1	7	277	9	284	4.94e-104	305
Msa1438820	AT3G53000.1	54.104	268	110	3	17	273	19	284	1.07e-99	294
Msa1438820	AT2G02360.1	36.129	155	85	4	10	161	8	151	5.80e-25	101
Msa1438820	AT2G02340.1	31.429	175	113	3	5	176	22	192	9.88e-23	95.9
Msa1438820	AT2G02230.1	34.266	143	87	2	22	163	35	171	4.64e-21	91.7
Msa1438820	AT1G09155.1	24.735	283	184	6	22	277	3	283	2.98e-20	88.6
Msa1438820	AT2G02240.1	34.507	142	86	3	22	162	64	199	5.06e-20	88.6
Msa1438820	AT5G24560.1	28.276	145	97	2	21	164	5	143	5.98e-18	80.5
Msa1438820	AT2G02350.2	31.544	149	86	5	18	160	23	161	8.34e-18	82.0
Msa1438820	AT2G02250.1	27.875	287	165	12	17	283	44	308	8.86e-18	82.0
Msa1438820	AT1G80110.1	24.528	265	180	8	19	273	1	255	2.19e-17	80.1
Msa1438820	AT2G02310.1	25.651	269	176	8	21	275	47	305	3.98e-17	80.1
Msa1438820	AT1G56240.1	26.071	280	176	7	22	273	4	280	7.94e-16	76.3
Msa1438820	AT1G56250.1	24.232	293	165	6	22	273	4	280	1.32e-15	75.5
Msa1438820	AT2G02300.1	25.993	277	163	9	18	277	33	284	3.21e-14	71.6
Msa1438820	AT2G02320.1	24.746	295	181	12	4	275	24	300	8.34e-14	70.9

Find 77 sgRNAs with CRISPR-Local

Find 312 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATAACAGCTACACAGCTTTC+TGG	0.183101	tig0028644:+4128	None:intergenic
TTATTCTTCCGAATACATTT+AGG	0.199539	tig0028644:-2824	Msa1438820:CDS
GATAATTTGTTTAATTAGTA+TGG	0.212453	tig0028644:-2302	Msa1438820:three_prime_UTR
TTGAGCTGAGTTAAGGTTAA+TGG	0.240519	tig0028644:-4213	Msa1438820:exon
TTGATTCTTCAGTGGGAATA+TGG	0.245615	tig0028644:+3709	None:intergenic
ATCATAATTAGAGGGAAGTT+TGG	0.273067	tig0028644:+4013	None:intergenic
GCTAAAGGGTTGTCAATAAC+TGG	0.296742	tig0028644:-3756	Msa1438820:CDS
CTTCAAACCACCAGATTTGT+TGG	0.309545	tig0028644:+2891	None:intergenic
AATTCTCCTAAACTTGGTTT+TGG	0.321554	tig0028644:+4152	None:intergenic
TATTCTTCCGAATACATTTA+GGG	0.326850	tig0028644:-2823	Msa1438820:CDS
TATTATTATTGTAGAAAGTT+TGG	0.336627	tig0028644:-3818	Msa1438820:intron
GGGAAACCCGCCAAGAGATT+TGG	0.340849	tig0028644:-2803	Msa1438820:CDS
CCCGCTGTCACGTTCGCTTT+CGG	0.346082	tig0028644:-4380	Msa1438820:five_prime_UTR
CTATATGTTCCTGCTGGAAA+TGG	0.353545	tig0028644:+2848	None:intergenic
CGGGTTTCCCTAAATGTATT+CGG	0.356289	tig0028644:+2816	None:intergenic
TGAGCTGAGTTAAGGTTAAT+GGG	0.368335	tig0028644:-4212	Msa1438820:exon
AATTATAACATCATAATTAG+AGG	0.373488	tig0028644:+4004	None:intergenic
TAAAGTGTGTTTGTCTATAT+CGG	0.379273	tig0028644:-3778	Msa1438820:CDS
GTCCATAGTTGGAATCTAAC+AGG	0.395466	tig0028644:+2734	None:intergenic
AAGCTGTGTAGCTGTTATAA+TGG	0.396206	tig0028644:-4123	Msa1438820:CDS
TCATCACCAAAACCAAGTTT+AGG	0.402083	tig0028644:-4158	Msa1438820:CDS
TTGCGTATCTCCAACAAATC+TGG	0.415817	tig0028644:-2901	Msa1438820:CDS
GTTTGAATTGAGCTGAGTTA+AGG	0.418209	tig0028644:-4220	Msa1438820:five_prime_UTR
AGCCTGTTAGATTCCAACTA+TGG	0.436078	tig0028644:-2736	Msa1438820:CDS
GTTTCAAGTTTGTATATATG+TGG	0.438544	tig0028644:+4271	None:intergenic
TGGTAATAGCGCCATTTACC+TGG	0.441087	tig0028644:+2668	None:intergenic
TGCAACACAGAACATGTTCA+TGG	0.443142	tig0028644:-2770	Msa1438820:CDS
GGATTGATGATCGAAGATAT+TGG	0.446080	tig0028644:-3734	Msa1438820:CDS
CCGCCAAGAGATTTGGAAGA+AGG	0.447038	tig0028644:-2796	Msa1438820:CDS
AGCTGTTATAATGGAATACT+TGG	0.448318	tig0028644:-4114	Msa1438820:CDS
AACCCTTCTTCCAAATCTCT+TGG	0.453456	tig0028644:+2793	None:intergenic
CCTTCTCATTTGGGGAAAAG+AGG	0.454751	tig0028644:-3954	Msa1438820:CDS
AGCTTCAATACTTTCGATGA+AGG	0.456690	tig0028644:-3912	Msa1438820:CDS
CTATGCATGTATCAAAGATT+AGG	0.458711	tig0028644:-2456	Msa1438820:three_prime_UTR
CCTTCTTCCAAATCTCTTGG+CGG	0.463503	tig0028644:+2796	None:intergenic
TCTGGTAATTCTCCTAAACT+TGG	0.464696	tig0028644:+4146	None:intergenic
CACAGAACATGTTCATGGTT+GGG	0.465386	tig0028644:-2765	Msa1438820:CDS
TATATGTTCCTGCTGGAAAT+GGG	0.468372	tig0028644:+2849	None:intergenic
TGTTCTATCATAATCTTGTA+TGG	0.469913	tig0028644:-2277	Msa1438820:three_prime_UTR
CGCCAAGAGATTTGGAAGAA+GGG	0.472287	tig0028644:-2795	Msa1438820:CDS
TGTTTGTCTATATCGGCTAA+AGG	0.472662	tig0028644:-3771	Msa1438820:CDS
CTTCTTCCAAATCTCTTGGC+GGG	0.472849	tig0028644:+2797	None:intergenic
TCAGCTCAATTCAAACAACT+TGG	0.487550	tig0028644:+4227	None:intergenic
GTTTGTCTATATCGGCTAAA+GGG	0.489431	tig0028644:-3770	Msa1438820:CDS
CTTCTCATTTGGGGAAAAGA+GGG	0.492520	tig0028644:-3953	Msa1438820:CDS
AATAAGCTATATGTTCCTGC+TGG	0.503889	tig0028644:+2842	None:intergenic
AGTTTGGTTGGATAGAAGCA+TGG	0.503977	tig0028644:-3802	Msa1438820:CDS
ATTATTGTAGAAAGTTTGGT+TGG	0.506585	tig0028644:-3814	Msa1438820:intron
TTTGAACTACTCTTAACCTA+AGG	0.508950	tig0028644:-2498	Msa1438820:exon
TCTTACCTTGATTCTTCAGT+GGG	0.519553	tig0028644:+3702	None:intergenic
ACACAGAACATGTTCATGGT+TGG	0.524349	tig0028644:-2766	Msa1438820:CDS
GTATCCTAGTGAGTTTAGAA+AGG	0.524884	tig0028644:-2531	Msa1438820:CDS
GATCATCTGAAGTCCATAGT+TGG	0.529126	tig0028644:+2723	None:intergenic
CAGCTCAATTCAAACAACTT+GGG	0.533271	tig0028644:+4228	None:intergenic
ATTGAGTTCCCATTTCCAGC+AGG	0.540368	tig0028644:-2857	Msa1438820:CDS
GTTTGGTTGGATAGAAGCAT+GGG	0.542266	tig0028644:-3801	Msa1438820:CDS
ATTGATTGCACACACACTAA+AGG	0.551213	tig0028644:-2581	Msa1438820:CDS
CCGAAAGCGAACGTGACAGC+GGG	0.552491	tig0028644:+4380	None:intergenic
TTAACCTTTCTAAACTCACT+AGG	0.563266	tig0028644:+2527	None:intergenic
ATCTTACCTTGATTCTTCAG+TGG	0.563619	tig0028644:+3701	None:intergenic
ACAAATCTGGTGGTTTGAAG+TGG	0.565964	tig0028644:-2888	Msa1438820:CDS
ATCTTCAACCACAAAATCGC+CGG	0.570051	tig0028644:+2643	None:intergenic
CTAAAGGGTTGTCAATAACT+GGG	0.571485	tig0028644:-3755	Msa1438820:CDS
ATATTCCCACTGAAGAATCA+AGG	0.574725	tig0028644:-3707	Msa1438820:intron
AGAATATTGTATACTTGTGC+CGG	0.575065	tig0028644:-2251	None:intergenic
GCTGTCACGTTCGCTTTCGG+AGG	0.580011	tig0028644:-4377	Msa1438820:five_prime_UTR
ATTATAACATCATAATTAGA+GGG	0.581280	tig0028644:+4005	None:intergenic
CAACCACAAAATCGCCGGCA+TGG	0.585784	tig0028644:+2648	None:intergenic
GAAGCTAATTTGCAAATCTG+AGG	0.595553	tig0028644:+4086	None:intergenic
CGTATCTCCAACAAATCTGG+TGG	0.613155	tig0028644:-2898	Msa1438820:CDS
GCTAATTTGCAAATCTGAGG+AGG	0.616624	tig0028644:+4089	None:intergenic
AAATGGCGCTATTACCATGC+CGG	0.633820	tig0028644:-2662	Msa1438820:CDS
TACTTTCGATGAAGGAACCA+AGG	0.641635	tig0028644:-3904	Msa1438820:intron
GATTGCACACACACTAAAGG+TGG	0.653493	tig0028644:-2578	Msa1438820:CDS
AAGAAGCACCATGAAAAGCA+CGG	0.655921	tig0028644:+4057	None:intergenic
TCCGAAAGCGAACGTGACAG+CGG	0.658699	tig0028644:+4379	None:intergenic
ATCTGGTGGTTTGAAGTGGA+CGG	0.666571	tig0028644:-2884	Msa1438820:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATACTAAAATTAATTAAAAG+AGG	+	tig0028644:3262-3281	None:intergenic	10.0%
!!!	TATATTTTTATTTTTACCTT+AGG	+	tig0028644:4160-4179	None:intergenic	10.0%
!!	ATACTAAAATTAATTAAAAG+AGG	+	tig0028644:3262-3281	None:intergenic	10.0%
!!!	TATATTTTTATTTTTACCTT+AGG	+	tig0028644:4160-4179	None:intergenic	10.0%
!!	ATTATAACATCATAATTAGA+GGG	+	tig0028644:2637-2656	None:intergenic	15.0%
!!	AATTATAACATCATAATTAG+AGG	+	tig0028644:2638-2657	None:intergenic	15.0%
!!	ATAATTCAAAAAATCTTTGA+TGG	-	tig0028644:2652-2671	Msa1438820:CDS	15.0%
!!	TATTATTATTGTAGAAAGTT+TGG	-	tig0028644:2821-2840	Msa1438820:CDS	15.0%
!!!	TTGAATTGATTTTATTGATT+TGG	-	tig0028644:3134-3153	Msa1438820:intron	15.0%
!!!	TTGATTTTCTTTTATTATTC+TGG	-	tig0028644:3535-3554	Msa1438820:intron	15.0%
!!!	GATAATTTGTTTAATTAGTA+TGG	-	tig0028644:4337-4356	Msa1438820:five_prime_UTR	15.0%
!!	ATTATAACATCATAATTAGA+GGG	+	tig0028644:2637-2656	None:intergenic	15.0%
!!	AATTATAACATCATAATTAG+AGG	+	tig0028644:2638-2657	None:intergenic	15.0%
!!	ATAATTCAAAAAATCTTTGA+TGG	-	tig0028644:2652-2671	Msa1438820:CDS	15.0%
!!	TATTATTATTGTAGAAAGTT+TGG	-	tig0028644:2821-2840	Msa1438820:CDS	15.0%
!!!	TTGAATTGATTTTATTGATT+TGG	-	tig0028644:3134-3153	Msa1438820:intron	15.0%
!!!	TTGATTTTCTTTTATTATTC+TGG	-	tig0028644:3535-3554	Msa1438820:intron	15.0%
!!!	GATAATTTGTTTAATTAGTA+TGG	-	tig0028644:4337-4356	Msa1438820:five_prime_UTR	15.0%
!!!	TTTATGTTAATTTGTTACCT+TGG	+	tig0028644:2755-2774	None:intergenic	20.0%
!!!	TTATAGGTAGAATTGATTTT+GGG	-	tig0028644:3318-3337	Msa1438820:intron	20.0%
!!	GAAATTAAAAAGACATAACT+TGG	+	tig0028644:3617-3636	None:intergenic	20.0%
!!!	TTAGTTTGGAAATAAAGTTT+CGG	-	tig0028644:3672-3691	Msa1438820:intron	20.0%
!!!	ATAAAAAATAGGGTTCTTTT+AGG	-	tig0028644:4259-4278	Msa1438820:five_prime_UTR	20.0%
!!!	TTTATGTTAATTTGTTACCT+TGG	+	tig0028644:2755-2774	None:intergenic	20.0%
!!!	TTATAGGTAGAATTGATTTT+GGG	-	tig0028644:3318-3337	Msa1438820:intron	20.0%
!!	GAAATTAAAAAGACATAACT+TGG	+	tig0028644:3617-3636	None:intergenic	20.0%
!!!	TTAGTTTGGAAATAAAGTTT+CGG	-	tig0028644:3672-3691	Msa1438820:intron	20.0%
!!!	ATAAAAAATAGGGTTCTTTT+AGG	-	tig0028644:4259-4278	Msa1438820:five_prime_UTR	20.0%
!!!	GTTTCAAGTTTGTATATATG+TGG	+	tig0028644:2371-2390	None:intergenic	25.0%
!!!	AAAATCGTTGCTTTTGTATA+TGG	-	tig0028644:2773-2792	Msa1438820:CDS	25.0%
!	ATTATTGTAGAAAGTTTGGT+TGG	-	tig0028644:2825-2844	Msa1438820:CDS	25.0%
!	TAAAGTGTGTTTGTCTATAT+CGG	-	tig0028644:2861-2880	Msa1438820:CDS	25.0%
!!	TTTCATGTTCTAGTGTATTT+TGG	-	tig0028644:3056-3075	Msa1438820:intron	25.0%
!	TTTATGTTTGCATGCATTTA+CGG	-	tig0028644:3183-3202	Msa1438820:intron	25.0%
!	TTTACGGAAAAAATTATGCT+TGG	-	tig0028644:3199-3218	Msa1438820:intron	25.0%
!	AAAATTATGCTTGGAGAATT+TGG	-	tig0028644:3208-3227	Msa1438820:intron	25.0%
!!!	GTATTGATTCTTTGTTAACT+CGG	-	tig0028644:3278-3297	Msa1438820:intron	25.0%
!!!	CTTATAGGTAGAATTGATTT+TGG	-	tig0028644:3317-3336	Msa1438820:intron	25.0%
!!!	TATAGGTAGAATTGATTTTG+GGG	-	tig0028644:3319-3338	Msa1438820:intron	25.0%
!!	CTATTAGTGTTGAATTAGTT+TGG	-	tig0028644:3658-3677	Msa1438820:intron	25.0%
!	GCAAATGATAAAGATAACAT+TGG	+	tig0028644:3705-3724	None:intergenic	25.0%
!	TTATTCTTCCGAATACATTT+AGG	-	tig0028644:3815-3834	Msa1438820:intron	25.0%
!	TATTCTTCCGAATACATTTA+GGG	-	tig0028644:3816-3835	Msa1438820:intron	25.0%
!!	TTAGAATTTTGTAGAATCCA+AGG	-	tig0028644:4283-4302	Msa1438820:five_prime_UTR	25.0%
!!	TAGAATTTTGTAGAATCCAA+GGG	-	tig0028644:4284-4303	Msa1438820:five_prime_UTR	25.0%
!	TGTTCTATCATAATCTTGTA+TGG	-	tig0028644:4362-4381	Msa1438820:five_prime_UTR	25.0%
!!!	GTTTCAAGTTTGTATATATG+TGG	+	tig0028644:2371-2390	None:intergenic	25.0%
!!!	AAAATCGTTGCTTTTGTATA+TGG	-	tig0028644:2773-2792	Msa1438820:CDS	25.0%
!	ATTATTGTAGAAAGTTTGGT+TGG	-	tig0028644:2825-2844	Msa1438820:CDS	25.0%
!	TAAAGTGTGTTTGTCTATAT+CGG	-	tig0028644:2861-2880	Msa1438820:CDS	25.0%
!!	TTTCATGTTCTAGTGTATTT+TGG	-	tig0028644:3056-3075	Msa1438820:intron	25.0%
!	TTTATGTTTGCATGCATTTA+CGG	-	tig0028644:3183-3202	Msa1438820:intron	25.0%
!	TTTACGGAAAAAATTATGCT+TGG	-	tig0028644:3199-3218	Msa1438820:intron	25.0%
!	AAAATTATGCTTGGAGAATT+TGG	-	tig0028644:3208-3227	Msa1438820:intron	25.0%
!!!	GTATTGATTCTTTGTTAACT+CGG	-	tig0028644:3278-3297	Msa1438820:intron	25.0%
!!!	CTTATAGGTAGAATTGATTT+TGG	-	tig0028644:3317-3336	Msa1438820:intron	25.0%
!!!	TATAGGTAGAATTGATTTTG+GGG	-	tig0028644:3319-3338	Msa1438820:intron	25.0%
!!	CTATTAGTGTTGAATTAGTT+TGG	-	tig0028644:3658-3677	Msa1438820:intron	25.0%
!	GCAAATGATAAAGATAACAT+TGG	+	tig0028644:3705-3724	None:intergenic	25.0%
!	TTATTCTTCCGAATACATTT+AGG	-	tig0028644:3815-3834	Msa1438820:intron	25.0%
!	TATTCTTCCGAATACATTTA+GGG	-	tig0028644:3816-3835	Msa1438820:intron	25.0%
!!	TTAGAATTTTGTAGAATCCA+AGG	-	tig0028644:4283-4302	Msa1438820:five_prime_UTR	25.0%
!!	TAGAATTTTGTAGAATCCAA+GGG	-	tig0028644:4284-4303	Msa1438820:five_prime_UTR	25.0%
!	TGTTCTATCATAATCTTGTA+TGG	-	tig0028644:4362-4381	Msa1438820:five_prime_UTR	25.0%
!!!	TTTTGGTGATGATGATGATT+GGG	+	tig0028644:2473-2492	None:intergenic	30.0%
!	AATTCTCCTAAACTTGGTTT+TGG	+	tig0028644:2490-2509	None:intergenic	30.0%
!	AGCTGTTATAATGGAATACT+TGG	-	tig0028644:2525-2544	Msa1438820:CDS	30.0%
!!	TTCTTTGGCTGATTTTGTTT+GGG	-	tig0028644:2600-2619	Msa1438820:CDS	30.0%
	ATCATAATTAGAGGGAAGTT+TGG	+	tig0028644:2629-2648	None:intergenic	30.0%
!	TTCTTCTTTTCCTTCTCATT+TGG	-	tig0028644:2675-2694	Msa1438820:CDS	30.0%
!	TCTTCTTTTCCTTCTCATTT+GGG	-	tig0028644:2676-2695	Msa1438820:CDS	30.0%
	TGTGAACTATGAAGTTCAAA+GGG	-	tig0028644:2998-3017	Msa1438820:intron	30.0%
	AGCTAGAAATGATAGCTTAT+AGG	-	tig0028644:3302-3321	Msa1438820:intron	30.0%
	GACAGCAAATATGTTATGTT+TGG	+	tig0028644:3370-3389	None:intergenic	30.0%
!	TAACCAAAACTGATTCTAAG+AGG	-	tig0028644:3403-3422	Msa1438820:intron	30.0%
!!!	ATCCATTTTTTCCCATGTTT+AGG	-	tig0028644:3437-3456	Msa1438820:intron	30.0%
	AAAGCTAAGTATTTGACCTT+TGG	+	tig0028644:3464-3483	None:intergenic	30.0%
	GAAGAGAAAGATATTGATGA+AGG	-	tig0028644:3506-3525	Msa1438820:intron	30.0%
!!!	GAAACTAGACTTGCTAATTT+TGG	+	tig0028644:3639-3658	None:intergenic	30.0%
!!!	TCATCGCAATGTTTTTTGAA+AGG	-	tig0028644:3947-3966	Msa1438820:CDS	30.0%
	TTAACCTTTCTAAACTCACT+AGG	+	tig0028644:4115-4134	None:intergenic	30.0%
	TTTGAACTACTCTTAACCTA+AGG	-	tig0028644:4141-4160	Msa1438820:CDS	30.0%
	CTATGCATGTATCAAAGATT+AGG	-	tig0028644:4183-4202	Msa1438820:CDS	30.0%
!	AGAGAATCGAGTTTTCAATA+GGG	-	tig0028644:4211-4230	Msa1438820:exon	30.0%
!	GTTTTCAATAGGGTTCTTTT+AGG	-	tig0028644:4221-4240	Msa1438820:five_prime_UTR	30.0%
!	AGAATTTTGTAGAATCCAAG+GGG	-	tig0028644:4285-4304	Msa1438820:five_prime_UTR	30.0%
	AGAATATTGTATACTTGTGC+CGG	-	tig0028644:4388-4407	Msa1438820:five_prime_UTR	30.0%
!!!	TTTTGGTGATGATGATGATT+GGG	+	tig0028644:2473-2492	None:intergenic	30.0%
!	AATTCTCCTAAACTTGGTTT+TGG	+	tig0028644:2490-2509	None:intergenic	30.0%
!	AGCTGTTATAATGGAATACT+TGG	-	tig0028644:2525-2544	Msa1438820:CDS	30.0%
!!	TTCTTTGGCTGATTTTGTTT+GGG	-	tig0028644:2600-2619	Msa1438820:CDS	30.0%
	ATCATAATTAGAGGGAAGTT+TGG	+	tig0028644:2629-2648	None:intergenic	30.0%
!	TTCTTCTTTTCCTTCTCATT+TGG	-	tig0028644:2675-2694	Msa1438820:CDS	30.0%
!	TCTTCTTTTCCTTCTCATTT+GGG	-	tig0028644:2676-2695	Msa1438820:CDS	30.0%
	TGTGAACTATGAAGTTCAAA+GGG	-	tig0028644:2998-3017	Msa1438820:intron	30.0%
	AGCTAGAAATGATAGCTTAT+AGG	-	tig0028644:3302-3321	Msa1438820:intron	30.0%
	GACAGCAAATATGTTATGTT+TGG	+	tig0028644:3370-3389	None:intergenic	30.0%
!	TAACCAAAACTGATTCTAAG+AGG	-	tig0028644:3403-3422	Msa1438820:intron	30.0%
!!!	ATCCATTTTTTCCCATGTTT+AGG	-	tig0028644:3437-3456	Msa1438820:intron	30.0%
	AAAGCTAAGTATTTGACCTT+TGG	+	tig0028644:3464-3483	None:intergenic	30.0%
	GAAGAGAAAGATATTGATGA+AGG	-	tig0028644:3506-3525	Msa1438820:intron	30.0%
!!!	GAAACTAGACTTGCTAATTT+TGG	+	tig0028644:3639-3658	None:intergenic	30.0%
!!!	TCATCGCAATGTTTTTTGAA+AGG	-	tig0028644:3947-3966	Msa1438820:CDS	30.0%
	TTAACCTTTCTAAACTCACT+AGG	+	tig0028644:4115-4134	None:intergenic	30.0%
	TTTGAACTACTCTTAACCTA+AGG	-	tig0028644:4141-4160	Msa1438820:CDS	30.0%
	CTATGCATGTATCAAAGATT+AGG	-	tig0028644:4183-4202	Msa1438820:CDS	30.0%
!	AGAGAATCGAGTTTTCAATA+GGG	-	tig0028644:4211-4230	Msa1438820:exon	30.0%
!	GTTTTCAATAGGGTTCTTTT+AGG	-	tig0028644:4221-4240	Msa1438820:five_prime_UTR	30.0%
!	AGAATTTTGTAGAATCCAAG+GGG	-	tig0028644:4285-4304	Msa1438820:five_prime_UTR	30.0%
	CAGCTCAATTCAAACAACTT+GGG	+	tig0028644:2414-2433	None:intergenic	35.0%
	TCAGCTCAATTCAAACAACT+TGG	+	tig0028644:2415-2434	None:intergenic	35.0%
	GTTTGAATTGAGCTGAGTTA+AGG	-	tig0028644:2419-2438	Msa1438820:three_prime_UTR	35.0%
	TTGAGCTGAGTTAAGGTTAA+TGG	-	tig0028644:2426-2445	Msa1438820:three_prime_UTR	35.0%
	TGAGCTGAGTTAAGGTTAAT+GGG	-	tig0028644:2427-2446	Msa1438820:three_prime_UTR	35.0%
!!!	GTTTTGGTGATGATGATGAT+TGG	+	tig0028644:2474-2493	None:intergenic	35.0%
	TCATCACCAAAACCAAGTTT+AGG	-	tig0028644:2481-2500	Msa1438820:three_prime_UTR	35.0%
	TCTGGTAATTCTCCTAAACT+TGG	+	tig0028644:2496-2515	None:intergenic	35.0%
	AAGCTGTGTAGCTGTTATAA+TGG	-	tig0028644:2516-2535	Msa1438820:CDS	35.0%
!	GAAGCTAATTTGCAAATCTG+AGG	+	tig0028644:2556-2575	None:intergenic	35.0%
!!	CTTCTTTGGCTGATTTTGTT+TGG	-	tig0028644:2599-2618	Msa1438820:CDS	35.0%
!	CTTCTTTTCCTTCTCATTTG+GGG	-	tig0028644:2677-2696	Msa1438820:CDS	35.0%
	AGCTTCAATACTTTCGATGA+AGG	-	tig0028644:2727-2746	Msa1438820:CDS	35.0%
!	TGTTTGTCTATATCGGCTAA+AGG	-	tig0028644:2868-2887	Msa1438820:CDS	35.0%
!	GTTTGTCTATATCGGCTAAA+GGG	-	tig0028644:2869-2888	Msa1438820:CDS	35.0%
	CTAAAGGGTTGTCAATAACT+GGG	-	tig0028644:2884-2903	Msa1438820:CDS	35.0%
!	GGATTGATGATCGAAGATAT+TGG	-	tig0028644:2905-2924	Msa1438820:CDS	35.0%
	TTGATTCTTCAGTGGGAATA+TGG	+	tig0028644:2933-2952	None:intergenic	35.0%
	ATATTCCCACTGAAGAATCA+AGG	-	tig0028644:2932-2951	Msa1438820:intron	35.0%
	TCTTACCTTGATTCTTCAGT+GGG	+	tig0028644:2940-2959	None:intergenic	35.0%
	ATCTTACCTTGATTCTTCAG+TGG	+	tig0028644:2941-2960	None:intergenic	35.0%
	GTGTGAACTATGAAGTTCAA+AGG	-	tig0028644:2997-3016	Msa1438820:intron	35.0%
	GTGAACTATGAAGTTCAAAG+GGG	-	tig0028644:2999-3018	Msa1438820:intron	35.0%
!!!	GTTCTAGTGTATTTTGGTCT+TGG	-	tig0028644:3062-3081	Msa1438820:intron	35.0%
!!	TTTGGTCTTGGAAATTCTGT+TGG	-	tig0028644:3074-3093	Msa1438820:intron	35.0%
!	GAAATTCTGTTGGCGATTTT+CGG	-	tig0028644:3084-3103	Msa1438820:intron	35.0%
!	AAATTCTGTTGGCGATTTTC+GGG	-	tig0028644:3085-3104	Msa1438820:intron	35.0%
	GACCTAAACATGGGAAAAAA+TGG	+	tig0028644:3442-3461	None:intergenic	35.0%
	TATATGTTCCTGCTGGAAAT+GGG	+	tig0028644:3793-3812	None:intergenic	35.0%
	AATAAGCTATATGTTCCTGC+TGG	+	tig0028644:3800-3819	None:intergenic	35.0%
!!!	CAATGTTTTTTGAAAGGTCC+AGG	-	tig0028644:3953-3972	Msa1438820:CDS	35.0%
!!	TTTTGAAAGGTCCAGGTAAA+TGG	-	tig0028644:3960-3979	Msa1438820:CDS	35.0%
	ATTGATTGCACACACACTAA+AGG	-	tig0028644:4058-4077	Msa1438820:CDS	35.0%
	GTATCCTAGTGAGTTTAGAA+AGG	-	tig0028644:4108-4127	Msa1438820:CDS	35.0%
!	CAGAGAATCGAGTTTTCAAT+AGG	-	tig0028644:4210-4229	Msa1438820:exon	35.0%
!	GAATTTTGTAGAATCCAAGG+GGG	-	tig0028644:4286-4305	Msa1438820:five_prime_UTR	35.0%
!	AATTTTGTAGAATCCAAGGG+GGG	-	tig0028644:4287-4306	Msa1438820:five_prime_UTR	35.0%
	CAGCTCAATTCAAACAACTT+GGG	+	tig0028644:2414-2433	None:intergenic	35.0%
	TCAGCTCAATTCAAACAACT+TGG	+	tig0028644:2415-2434	None:intergenic	35.0%
	GTTTGAATTGAGCTGAGTTA+AGG	-	tig0028644:2419-2438	Msa1438820:three_prime_UTR	35.0%
	TTGAGCTGAGTTAAGGTTAA+TGG	-	tig0028644:2426-2445	Msa1438820:three_prime_UTR	35.0%
	TGAGCTGAGTTAAGGTTAAT+GGG	-	tig0028644:2427-2446	Msa1438820:three_prime_UTR	35.0%
!!!	GTTTTGGTGATGATGATGAT+TGG	+	tig0028644:2474-2493	None:intergenic	35.0%
	TCATCACCAAAACCAAGTTT+AGG	-	tig0028644:2481-2500	Msa1438820:three_prime_UTR	35.0%
	TCTGGTAATTCTCCTAAACT+TGG	+	tig0028644:2496-2515	None:intergenic	35.0%
	AAGCTGTGTAGCTGTTATAA+TGG	-	tig0028644:2516-2535	Msa1438820:CDS	35.0%
!	GAAGCTAATTTGCAAATCTG+AGG	+	tig0028644:2556-2575	None:intergenic	35.0%
!!	CTTCTTTGGCTGATTTTGTT+TGG	-	tig0028644:2599-2618	Msa1438820:CDS	35.0%
!	CTTCTTTTCCTTCTCATTTG+GGG	-	tig0028644:2677-2696	Msa1438820:CDS	35.0%
	AGCTTCAATACTTTCGATGA+AGG	-	tig0028644:2727-2746	Msa1438820:CDS	35.0%
!	TGTTTGTCTATATCGGCTAA+AGG	-	tig0028644:2868-2887	Msa1438820:CDS	35.0%
!	GTTTGTCTATATCGGCTAAA+GGG	-	tig0028644:2869-2888	Msa1438820:CDS	35.0%
	CTAAAGGGTTGTCAATAACT+GGG	-	tig0028644:2884-2903	Msa1438820:CDS	35.0%
!	GGATTGATGATCGAAGATAT+TGG	-	tig0028644:2905-2924	Msa1438820:CDS	35.0%
	TTGATTCTTCAGTGGGAATA+TGG	+	tig0028644:2933-2952	None:intergenic	35.0%
	ATATTCCCACTGAAGAATCA+AGG	-	tig0028644:2932-2951	Msa1438820:intron	35.0%
	TCTTACCTTGATTCTTCAGT+GGG	+	tig0028644:2940-2959	None:intergenic	35.0%
	ATCTTACCTTGATTCTTCAG+TGG	+	tig0028644:2941-2960	None:intergenic	35.0%
	GTGTGAACTATGAAGTTCAA+AGG	-	tig0028644:2997-3016	Msa1438820:intron	35.0%
	GTGAACTATGAAGTTCAAAG+GGG	-	tig0028644:2999-3018	Msa1438820:intron	35.0%
!!!	GTTCTAGTGTATTTTGGTCT+TGG	-	tig0028644:3062-3081	Msa1438820:intron	35.0%
!!	TTTGGTCTTGGAAATTCTGT+TGG	-	tig0028644:3074-3093	Msa1438820:intron	35.0%
!	GAAATTCTGTTGGCGATTTT+CGG	-	tig0028644:3084-3103	Msa1438820:intron	35.0%
!	AAATTCTGTTGGCGATTTTC+GGG	-	tig0028644:3085-3104	Msa1438820:intron	35.0%
	GACCTAAACATGGGAAAAAA+TGG	+	tig0028644:3442-3461	None:intergenic	35.0%
	TATATGTTCCTGCTGGAAAT+GGG	+	tig0028644:3793-3812	None:intergenic	35.0%
	AATAAGCTATATGTTCCTGC+TGG	+	tig0028644:3800-3819	None:intergenic	35.0%
!!!	CAATGTTTTTTGAAAGGTCC+AGG	-	tig0028644:3953-3972	Msa1438820:CDS	35.0%
!!	TTTTGAAAGGTCCAGGTAAA+TGG	-	tig0028644:3960-3979	Msa1438820:CDS	35.0%
	ATTGATTGCACACACACTAA+AGG	-	tig0028644:4058-4077	Msa1438820:CDS	35.0%
	GTATCCTAGTGAGTTTAGAA+AGG	-	tig0028644:4108-4127	Msa1438820:CDS	35.0%
!	CAGAGAATCGAGTTTTCAAT+AGG	-	tig0028644:4210-4229	Msa1438820:exon	35.0%
!	GAATTTTGTAGAATCCAAGG+GGG	-	tig0028644:4286-4305	Msa1438820:five_prime_UTR	35.0%
!	AATTTTGTAGAATCCAAGGG+GGG	-	tig0028644:4287-4306	Msa1438820:five_prime_UTR	35.0%
	ATAACAGCTACACAGCTTTC+TGG	+	tig0028644:2514-2533	None:intergenic	40.0%
!	GCTAATTTGCAAATCTGAGG+AGG	+	tig0028644:2553-2572	None:intergenic	40.0%
!!	AAGAAGCACCATGAAAAGCA+CGG	+	tig0028644:2585-2604	None:intergenic	40.0%
!	TGCTTTTCATGGTGCTTCTT+TGG	-	tig0028644:2585-2604	Msa1438820:CDS	40.0%
	CTTCTCATTTGGGGAAAAGA+GGG	-	tig0028644:2686-2705	Msa1438820:CDS	40.0%
	TACTTTCGATGAAGGAACCA+AGG	-	tig0028644:2735-2754	Msa1438820:CDS	40.0%
	AGTTTGGTTGGATAGAAGCA+TGG	-	tig0028644:2837-2856	Msa1438820:CDS	40.0%
!	GTTTGGTTGGATAGAAGCAT+GGG	-	tig0028644:2838-2857	Msa1438820:CDS	40.0%
	GCTAAAGGGTTGTCAATAAC+TGG	-	tig0028644:2883-2902	Msa1438820:CDS	40.0%
!!	GCTAGAATCATTTCTGAGGT+TGG	-	tig0028644:3341-3360	Msa1438820:intron	40.0%
!	GGACCTCTTAGAATCAGTTT+TGG	+	tig0028644:3409-3428	None:intergenic	40.0%
!	ACTGATTCTAAGAGGTCCAA+AGG	-	tig0028644:3411-3430	Msa1438820:intron	40.0%
	GGAAAAAATGGATCCACCTT+TGG	+	tig0028644:3430-3449	None:intergenic	40.0%
	TTTCCCATGTTTAGGTCCAA+AGG	-	tig0028644:3445-3464	Msa1438820:intron	40.0%
	TGACCTTTGGACCTAAACAT+GGG	+	tig0028644:3451-3470	None:intergenic	40.0%
	TTGACCTTTGGACCTAAACA+TGG	+	tig0028644:3452-3471	None:intergenic	40.0%
	TTGCGTATCTCCAACAAATC+TGG	-	tig0028644:3738-3757	Msa1438820:CDS	40.0%
	CTTCAAACCACCAGATTTGT+TGG	+	tig0028644:3751-3770	None:intergenic	40.0%
	ACAAATCTGGTGGTTTGAAG+TGG	-	tig0028644:3751-3770	Msa1438820:CDS	40.0%
	CTATATGTTCCTGCTGGAAA+TGG	+	tig0028644:3794-3813	None:intergenic	40.0%
	CGGGTTTCCCTAAATGTATT+CGG	+	tig0028644:3826-3845	None:intergenic	40.0%
	AACCCTTCTTCCAAATCTCT+TGG	+	tig0028644:3849-3868	None:intergenic	40.0%
	TGCAACACAGAACATGTTCA+TGG	-	tig0028644:3869-3888	Msa1438820:intron	40.0%
	ACACAGAACATGTTCATGGT+TGG	-	tig0028644:3873-3892	Msa1438820:intron	40.0%
	CACAGAACATGTTCATGGTT+GGG	-	tig0028644:3874-3893	Msa1438820:intron	40.0%
	AGCCTGTTAGATTCCAACTA+TGG	-	tig0028644:3903-3922	Msa1438820:intron	40.0%
	GTCCATAGTTGGAATCTAAC+AGG	+	tig0028644:3908-3927	None:intergenic	40.0%
!	GATCATCTGAAGTCCATAGT+TGG	+	tig0028644:3919-3938	None:intergenic	40.0%
	ATCTTCAACCACAAAATCGC+CGG	+	tig0028644:3999-4018	None:intergenic	40.0%
!	ATTTTGTAGAATCCAAGGGG+GGG	-	tig0028644:4288-4307	Msa1438820:five_prime_UTR	40.0%
	ATAACAGCTACACAGCTTTC+TGG	+	tig0028644:2514-2533	None:intergenic	40.0%
!	GCTAATTTGCAAATCTGAGG+AGG	+	tig0028644:2553-2572	None:intergenic	40.0%
!!	AAGAAGCACCATGAAAAGCA+CGG	+	tig0028644:2585-2604	None:intergenic	40.0%
!	TGCTTTTCATGGTGCTTCTT+TGG	-	tig0028644:2585-2604	Msa1438820:CDS	40.0%
	CTTCTCATTTGGGGAAAAGA+GGG	-	tig0028644:2686-2705	Msa1438820:CDS	40.0%
	TACTTTCGATGAAGGAACCA+AGG	-	tig0028644:2735-2754	Msa1438820:CDS	40.0%
	AGTTTGGTTGGATAGAAGCA+TGG	-	tig0028644:2837-2856	Msa1438820:CDS	40.0%
!	GTTTGGTTGGATAGAAGCAT+GGG	-	tig0028644:2838-2857	Msa1438820:CDS	40.0%
	GCTAAAGGGTTGTCAATAAC+TGG	-	tig0028644:2883-2902	Msa1438820:CDS	40.0%
!!	GCTAGAATCATTTCTGAGGT+TGG	-	tig0028644:3341-3360	Msa1438820:intron	40.0%
!	GGACCTCTTAGAATCAGTTT+TGG	+	tig0028644:3409-3428	None:intergenic	40.0%
!	ACTGATTCTAAGAGGTCCAA+AGG	-	tig0028644:3411-3430	Msa1438820:intron	40.0%
	GGAAAAAATGGATCCACCTT+TGG	+	tig0028644:3430-3449	None:intergenic	40.0%
	TTTCCCATGTTTAGGTCCAA+AGG	-	tig0028644:3445-3464	Msa1438820:intron	40.0%
	TGACCTTTGGACCTAAACAT+GGG	+	tig0028644:3451-3470	None:intergenic	40.0%
	TTGACCTTTGGACCTAAACA+TGG	+	tig0028644:3452-3471	None:intergenic	40.0%
	TTGCGTATCTCCAACAAATC+TGG	-	tig0028644:3738-3757	Msa1438820:CDS	40.0%
	CTTCAAACCACCAGATTTGT+TGG	+	tig0028644:3751-3770	None:intergenic	40.0%
	ACAAATCTGGTGGTTTGAAG+TGG	-	tig0028644:3751-3770	Msa1438820:CDS	40.0%
	CTATATGTTCCTGCTGGAAA+TGG	+	tig0028644:3794-3813	None:intergenic	40.0%
	CGGGTTTCCCTAAATGTATT+CGG	+	tig0028644:3826-3845	None:intergenic	40.0%
	AACCCTTCTTCCAAATCTCT+TGG	+	tig0028644:3849-3868	None:intergenic	40.0%
	TGCAACACAGAACATGTTCA+TGG	-	tig0028644:3869-3888	Msa1438820:intron	40.0%
	ACACAGAACATGTTCATGGT+TGG	-	tig0028644:3873-3892	Msa1438820:intron	40.0%
	CACAGAACATGTTCATGGTT+GGG	-	tig0028644:3874-3893	Msa1438820:intron	40.0%
	AGCCTGTTAGATTCCAACTA+TGG	-	tig0028644:3903-3922	Msa1438820:intron	40.0%
	GTCCATAGTTGGAATCTAAC+AGG	+	tig0028644:3908-3927	None:intergenic	40.0%
!	GATCATCTGAAGTCCATAGT+TGG	+	tig0028644:3919-3938	None:intergenic	40.0%
	ATCTTCAACCACAAAATCGC+CGG	+	tig0028644:3999-4018	None:intergenic	40.0%
!	ATTTTGTAGAATCCAAGGGG+GGG	-	tig0028644:4288-4307	Msa1438820:five_prime_UTR	40.0%
!	TCTCTCAACCGTGCTTTTCA+TGG	-	tig0028644:2574-2593	Msa1438820:CDS	45.0%
!	CCTCTTTTCCCCAAATGAGA+AGG	+	tig0028644:2688-2707	None:intergenic	45.0%
	CCTTCTCATTTGGGGAAAAG+AGG	-	tig0028644:2685-2704	Msa1438820:CDS	45.0%
	TGGGGCTAGAATCATTTCTG+AGG	-	tig0028644:3337-3356	Msa1438820:intron	45.0%
!	GATTCTAAGAGGTCCAAAGG+TGG	-	tig0028644:3414-3433	Msa1438820:intron	45.0%
	CGTATCTCCAACAAATCTGG+TGG	-	tig0028644:3741-3760	Msa1438820:CDS	45.0%
!	ATCTGGTGGTTTGAAGTGGA+CGG	-	tig0028644:3755-3774	Msa1438820:CDS	45.0%
	ATTGAGTTCCCATTTCCAGC+AGG	-	tig0028644:3782-3801	Msa1438820:CDS	45.0%
	CTTCTTCCAAATCTCTTGGC+GGG	+	tig0028644:3845-3864	None:intergenic	45.0%
	CCTTCTTCCAAATCTCTTGG+CGG	+	tig0028644:3846-3865	None:intergenic	45.0%
	CGCCAAGAGATTTGGAAGAA+GGG	-	tig0028644:3844-3863	Msa1438820:intron	45.0%
	TGGTAATAGCGCCATTTACC+TGG	+	tig0028644:3974-3993	None:intergenic	45.0%
	AAATGGCGCTATTACCATGC+CGG	-	tig0028644:3977-3996	Msa1438820:CDS	45.0%
!	GGCGATTTTGTGGTTGAAGA+TGG	-	tig0028644:3998-4017	Msa1438820:CDS	45.0%
	GATTGCACACACACTAAAGG+TGG	-	tig0028644:4061-4080	Msa1438820:CDS	45.0%
	ACATATATACATCCCCCCCT+TGG	+	tig0028644:4303-4322	None:intergenic	45.0%
!	TCTCTCAACCGTGCTTTTCA+TGG	-	tig0028644:2574-2593	Msa1438820:CDS	45.0%
!	CCTCTTTTCCCCAAATGAGA+AGG	+	tig0028644:2688-2707	None:intergenic	45.0%
	CCTTCTCATTTGGGGAAAAG+AGG	-	tig0028644:2685-2704	Msa1438820:CDS	45.0%
	TGGGGCTAGAATCATTTCTG+AGG	-	tig0028644:3337-3356	Msa1438820:intron	45.0%
!	GATTCTAAGAGGTCCAAAGG+TGG	-	tig0028644:3414-3433	Msa1438820:intron	45.0%
	CGTATCTCCAACAAATCTGG+TGG	-	tig0028644:3741-3760	Msa1438820:CDS	45.0%
!	ATCTGGTGGTTTGAAGTGGA+CGG	-	tig0028644:3755-3774	Msa1438820:CDS	45.0%
	ATTGAGTTCCCATTTCCAGC+AGG	-	tig0028644:3782-3801	Msa1438820:CDS	45.0%
	CTTCTTCCAAATCTCTTGGC+GGG	+	tig0028644:3845-3864	None:intergenic	45.0%
	CCTTCTTCCAAATCTCTTGG+CGG	+	tig0028644:3846-3865	None:intergenic	45.0%
	CGCCAAGAGATTTGGAAGAA+GGG	-	tig0028644:3844-3863	Msa1438820:intron	45.0%
	TGGTAATAGCGCCATTTACC+TGG	+	tig0028644:3974-3993	None:intergenic	45.0%
	AAATGGCGCTATTACCATGC+CGG	-	tig0028644:3977-3996	Msa1438820:CDS	45.0%
!	GGCGATTTTGTGGTTGAAGA+TGG	-	tig0028644:3998-4017	Msa1438820:CDS	45.0%
	GATTGCACACACACTAAAGG+TGG	-	tig0028644:4061-4080	Msa1438820:CDS	45.0%
	ACATATATACATCCCCCCCT+TGG	+	tig0028644:4303-4322	None:intergenic	45.0%
!!	TTCAAAAAAAAATAAAAAAT+AGG	-	tig0028644:4248-4267	Msa1438820:five_prime_UTR	5.0%
!!	TCAAAAAAAAATAAAAAATA+GGG	-	tig0028644:4249-4268	Msa1438820:five_prime_UTR	5.0%
!!	TTCAAAAAAAAATAAAAAAT+AGG	-	tig0028644:4248-4267	Msa1438820:five_prime_UTR	5.0%
!!	TCAAAAAAAAATAAAAAATA+GGG	-	tig0028644:4249-4268	Msa1438820:five_prime_UTR	5.0%
!!!	GTTGGCGATTTTCGGGTTTG+CGG	-	tig0028644:3092-3111	Msa1438820:intron	50.0%
	TAACTTGGCGTCATGATCCC+CGG	+	tig0028644:3602-3621	None:intergenic	50.0%
	CCGCCAAGAGATTTGGAAGA+AGG	-	tig0028644:3843-3862	Msa1438820:intron	50.0%
!	TTACCATGCCGGCGATTTTG+TGG	-	tig0028644:3988-4007	Msa1438820:CDS	50.0%
!!!	GTTGGCGATTTTCGGGTTTG+CGG	-	tig0028644:3092-3111	Msa1438820:intron	50.0%
	TAACTTGGCGTCATGATCCC+CGG	+	tig0028644:3602-3621	None:intergenic	50.0%
	CCGCCAAGAGATTTGGAAGA+AGG	-	tig0028644:3843-3862	Msa1438820:intron	50.0%
!	TTACCATGCCGGCGATTTTG+TGG	-	tig0028644:3988-4007	Msa1438820:CDS	50.0%
	TCCGAAAGCGAACGTGACAG+CGG	+	tig0028644:2263-2282	None:intergenic	55.0%
	TGTCGCAACTGGGATCGCAA+TGG	+	tig0028644:3572-3591	None:intergenic	55.0%
	CGGTACTAGCTGTCGCAACT+GGG	+	tig0028644:3582-3601	None:intergenic	55.0%
	CCAGTTGCGACAGCTAGTAC+CGG	-	tig0028644:3580-3599	Msa1438820:intron	55.0%
	CAGTTGCGACAGCTAGTACC+GGG	-	tig0028644:3581-3600	Msa1438820:intron	55.0%
	AGTTGCGACAGCTAGTACCG+GGG	-	tig0028644:3582-3601	Msa1438820:intron	55.0%
	GGGAAACCCGCCAAGAGATT+TGG	-	tig0028644:3836-3855	Msa1438820:intron	55.0%
	CAACCACAAAATCGCCGGCA+TGG	+	tig0028644:3994-4013	None:intergenic	55.0%
	ACGTGACAGCGGGATATGAC+CGG	+	tig0028644:2252-2271	None:intergenic	55.0%
	TCCGAAAGCGAACGTGACAG+CGG	+	tig0028644:2263-2282	None:intergenic	55.0%
	TGTCGCAACTGGGATCGCAA+TGG	+	tig0028644:3572-3591	None:intergenic	55.0%
	CGGTACTAGCTGTCGCAACT+GGG	+	tig0028644:3582-3601	None:intergenic	55.0%
	CCAGTTGCGACAGCTAGTAC+CGG	-	tig0028644:3580-3599	Msa1438820:intron	55.0%
	CAGTTGCGACAGCTAGTACC+GGG	-	tig0028644:3581-3600	Msa1438820:intron	55.0%
	AGTTGCGACAGCTAGTACCG+GGG	-	tig0028644:3582-3601	Msa1438820:intron	55.0%
	GGGAAACCCGCCAAGAGATT+TGG	-	tig0028644:3836-3855	Msa1438820:intron	55.0%
	CAACCACAAAATCGCCGGCA+TGG	+	tig0028644:3994-4013	None:intergenic	55.0%
	CCGAAAGCGAACGTGACAGC+GGG	+	tig0028644:2262-2281	None:intergenic	60.0%
	CCCGCTGTCACGTTCGCTTT+CGG	-	tig0028644:2259-2278	Msa1438820:three_prime_UTR	60.0%
	GCTGTCACGTTCGCTTTCGG+AGG	-	tig0028644:2262-2281	Msa1438820:three_prime_UTR	60.0%
	CCGGTACTAGCTGTCGCAAC+TGG	+	tig0028644:3583-3602	None:intergenic	60.0%
	CCGAAAGCGAACGTGACAGC+GGG	+	tig0028644:2262-2281	None:intergenic	60.0%
	CCCGCTGTCACGTTCGCTTT+CGG	-	tig0028644:2259-2278	Msa1438820:three_prime_UTR	60.0%
	GCTGTCACGTTCGCTTTCGG+AGG	-	tig0028644:2262-2281	Msa1438820:three_prime_UTR	60.0%
	CCGGTACTAGCTGTCGCAAC+TGG	+	tig0028644:3583-3602	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
tig0028644	gene	2252	4409	2252	ID=Msa1438820;Name=Msa1438820
tig0028644	mRNA	2252	4409	2252	ID=Msa1438820-mRNA-1;Parent=Msa1438820;Name=Msa1438820-mRNA-1;_AED=0.20;_eAED=0.20;_QI=193\|1\|1\|1\|1\|1\|3\|253\|286
tig0028644	exon	2252	2934	2252	ID=Msa1438820-mRNA-1:exon:11481;Parent=Msa1438820-mRNA-1
tig0028644	exon	3708	3826	3708	ID=Msa1438820-mRNA-1:exon:11480;Parent=Msa1438820-mRNA-1
tig0028644	exon	3905	4409	3905	ID=Msa1438820-mRNA-1:exon:11479;Parent=Msa1438820-mRNA-1
tig0028644	five_prime_UTR	4217	4409	4217	ID=Msa1438820-mRNA-1:five_prime_utr;Parent=Msa1438820-mRNA-1
tig0028644	CDS	3905	4216	3905	ID=Msa1438820-mRNA-1:cds;Parent=Msa1438820-mRNA-1
tig0028644	CDS	3708	3826	3708	ID=Msa1438820-mRNA-1:cds;Parent=Msa1438820-mRNA-1
tig0028644	CDS	2505	2934	2505	ID=Msa1438820-mRNA-1:cds;Parent=Msa1438820-mRNA-1
tig0028644	three_prime_UTR	2252	2504	2252	ID=Msa1438820-mRNA-1:three_prime_utr;Parent=Msa1438820-mRNA-1

Gene Sequence

>Msa1438820

ATGGGTATCTTGTTCTCAGTTTCATCCCAATCATCATCATCACCAAAACCAAGTTTAGGAGAATTACCAGAAAGCTGTGTAGCTGTTATAATGGAATACTTGGATCCTCCTCAGATTTGCAAATTAGCTTCTCTCAACCGTGCTTTTCATGGTGCTTCTTTGGCTGATTTTGTTTGGGAATCCAAACTTCCCTCTAATTATGATGTTATAATTCAAAAAATCTTTGATGGTTCTTCTTTTCCTTCTCATTTGGGGAAAAGAGGGATTTATTCAAGACTTTGTAGCTTCAATACTTTCGATGAAGGAACCAAGAAAGTTTGGTTGGATAGAAGCATGGGTAAAGTGTGTTTGTCTATATCGGCTAAAGGGTTGTCAATAACTGGGATTGATGATCGAAGATATTGGAACCATATTCCCACTGAAGAATCAAGATTCAATAATGTTGCGTATCTCCAACAAATCTGGTGGTTTGAAGTGGACGGTGAAATTGAGTTCCCATTTCCAGCAGGAACATATAGCTTATTCTTCCGAATACATTTAGGGAAACCCGCCAAGAGATTTGGAAGAAGGGTTTGCAACACAGAACATGTTCATGGTTGGGATGTAAAGCCTGTTAGATTCCAACTATGGACTTCAGATGATCAATATGATTCATCGCAATGTTTTTTGAAAGGTCCAGGTAAATGGCGCTATTACCATGCCGGCGATTTTGTGGTTGAAGATGGTAATGTATCAACAAAAGTAAAATTCTCTCTGACTCAAATTGATTGCACACACACTAAAGGTGGTCTCTGTTTAGATTCTGTGTTTGTGTATCCTAGTGAGTTTAGAAAGGTTAAAGAATTTTTGAACTACTCTTAA

Protein sequence

>Msa1438820

MGILFSVSSQSSSSPKPSLGELPESCVAVIMEYLDPPQICKLASLNRAFHGASLADFVWESKLPSNYDVIIQKIFDGSSFPSHLGKRGIYSRLCSFNTFDEGTKKVWLDRSMGKVCLSISAKGLSITGIDDRRYWNHIPTEESRFNNVAYLQQIWWFEVDGEIEFPFPAGTYSLFFRIHLGKPAKRFGRRVCNTEHVHGWDVKPVRFQLWTSDDQYDSSQCFLKGPGKWRYYHAGDFVVEDGNVSTKVKFSLTQIDCTHTKGGLCLDSVFVYPSEFRKVKEFLNYS*