Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195080 | AAN10048.1 | 63.636 | 77 | 26 | 1 | 308 | 382 | 166 | 242 | 1.35e-21 | 106 |
| Msa0195080 | AAN10048.1 | 87.025 | 316 | 20 | 5 | 15 | 309 | 10 | 325 | 0.0 | 543 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195080 | sp|P36910|CHIE_BETVU | 48.013 | 302 | 129 | 8 | 1 | 283 | 1 | 293 | 7.22e-83 | 258 |
| Msa0195080 | sp|P36910|CHIE_BETVU | 40.517 | 116 | 62 | 3 | 289 | 404 | 156 | 264 | 1.78e-16 | 82.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195080 | Q8GTL6 | 63.636 | 77 | 26 | 1 | 308 | 382 | 166 | 242 | 6.46e-22 | 106 |
| Msa0195080 | Q8GTL6 | 87.025 | 316 | 20 | 5 | 15 | 309 | 10 | 325 | 0.0 | 543 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0195080 | Msa0195100 | 0.905979 | 2.418920e-80 | -8.615850e-47 |
| Msa0195080 | Msa0195110 | 0.858824 | 6.318773e-63 | -8.615850e-47 |
| Msa0195080 | Msa0202800 | 0.862822 | 3.860268e-64 | -8.615850e-47 |
| Msa0195080 | Msa0230320 | 0.883288 | 5.092089e-71 | -8.615850e-47 |
| Msa0195080 | Msa0245900 | 0.975989 | 5.638998e-141 | -8.615850e-47 |
| Msa0195080 | Msa0284480 | 0.895343 | 1.048484e-75 | -8.615850e-47 |
| Msa0195080 | Msa0308630 | 0.878449 | 2.784468e-69 | -8.615850e-47 |
| Msa0195080 | Msa0322530 | 0.860744 | 1.668292e-63 | -8.615850e-47 |
| Msa0195080 | Msa0322540 | 0.966131 | 1.636323e-125 | -8.615850e-47 |
| Msa0195080 | Msa0389770 | 0.871183 | 8.297817e-67 | -8.615850e-47 |
| Msa0195080 | Msa1423780 | 0.881374 | 2.530302e-70 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195080 | MtrunA17_Chr2g0300141 | 84.756 | 328 | 31 | 4 | 1 | 310 | 1 | 327 | 0.0 | 540 |
| Msa0195080 | MtrunA17_Chr2g0300141 | 68.000 | 75 | 22 | 1 | 310 | 382 | 173 | 247 | 7.62e-27 | 109 |
| Msa0195080 | MtrunA17_Chr2g0300081 | 82.727 | 330 | 36 | 5 | 1 | 310 | 1 | 329 | 0.0 | 526 |
| Msa0195080 | MtrunA17_Chr2g0300081 | 64.935 | 77 | 25 | 1 | 308 | 382 | 173 | 249 | 1.50e-25 | 105 |
| Msa0195080 | MtrunA17_Chr2g0300101 | 81.651 | 327 | 42 | 4 | 1 | 310 | 1 | 326 | 0.0 | 510 |
| Msa0195080 | MtrunA17_Chr2g0300101 | 65.333 | 75 | 24 | 1 | 310 | 382 | 173 | 247 | 3.21e-25 | 105 |
| Msa0195080 | MtrunA17_Chr2g0300051 | 74.085 | 328 | 62 | 6 | 1 | 310 | 1 | 323 | 1.41e-155 | 442 |
| Msa0195080 | MtrunA17_Chr2g0300051 | 66.667 | 75 | 23 | 1 | 310 | 382 | 170 | 244 | 5.54e-25 | 104 |
| Msa0195080 | MtrunA17_Chr2g0300181 | 55.287 | 331 | 126 | 5 | 1 | 310 | 1 | 330 | 2.78e-118 | 347 |
| Msa0195080 | MtrunA17_Chr2g0300181 | 55.556 | 72 | 30 | 1 | 310 | 379 | 175 | 246 | 6.92e-18 | 84.3 |
| Msa0195080 | MtrunA17_Chr5g0418461 | 53.737 | 281 | 103 | 9 | 23 | 283 | 21 | 294 | 2.02e-86 | 265 |
| Msa0195080 | MtrunA17_Chr5g0418461 | 37.755 | 98 | 57 | 3 | 308 | 404 | 169 | 263 | 1.05e-11 | 65.5 |
| Msa0195080 | MtrunA17_Chr1g0202241 | 49.505 | 303 | 126 | 10 | 1 | 283 | 1 | 296 | 8.10e-84 | 258 |
| Msa0195080 | MtrunA17_Chr1g0202241 | 43.529 | 85 | 46 | 1 | 298 | 382 | 161 | 243 | 6.51e-17 | 80.9 |
| Msa0195080 | MtrunA17_Chr7g0240891 | 47.855 | 303 | 128 | 10 | 5 | 283 | 2 | 298 | 3.92e-82 | 254 |
| Msa0195080 | MtrunA17_Chr7g0240891 | 39.362 | 94 | 53 | 3 | 312 | 404 | 177 | 267 | 2.85e-13 | 70.1 |
| Msa0195080 | MtrunA17_Chr1g0202261 | 50.554 | 271 | 109 | 7 | 21 | 270 | 19 | 285 | 6.74e-80 | 248 |
| Msa0195080 | MtrunA17_Chr1g0202261 | 42.553 | 94 | 49 | 3 | 312 | 404 | 177 | 266 | 2.62e-15 | 76.3 |
| Msa0195080 | MtrunA17_Chr1g0202231 | 48.658 | 298 | 124 | 10 | 4 | 280 | 6 | 295 | 8.63e-80 | 249 |
| Msa0195080 | MtrunA17_Chr1g0202231 | 43.333 | 90 | 49 | 1 | 293 | 382 | 158 | 245 | 3.72e-17 | 82.0 |
| Msa0195080 | MtrunA17_Chr7g0274861 | 47.423 | 291 | 114 | 8 | 11 | 283 | 6 | 275 | 1.75e-76 | 238 |
| Msa0195080 | MtrunA17_Chr7g0274861 | 41.489 | 94 | 51 | 3 | 312 | 404 | 154 | 244 | 7.00e-14 | 71.6 |
| Msa0195080 | MtrunA17_Chr2g0300161 | 72.254 | 173 | 34 | 3 | 1 | 159 | 1 | 173 | 1.36e-73 | 227 |
| Msa0195080 | MtrunA17_Chr2g0300171 | 79.310 | 145 | 24 | 2 | 171 | 310 | 1 | 144 | 1.42e-73 | 226 |
| Msa0195080 | MtrunA17_Chr2g0300171 | 68.750 | 64 | 18 | 1 | 321 | 382 | 1 | 64 | 6.07e-23 | 94.0 |
| Msa0195080 | MtrunA17_Chr7g0275231 | 46.128 | 297 | 131 | 9 | 11 | 283 | 12 | 303 | 3.76e-73 | 231 |
| Msa0195080 | MtrunA17_Chr7g0275231 | 40.278 | 72 | 41 | 1 | 298 | 369 | 166 | 235 | 6.27e-11 | 63.2 |
| Msa0195080 | MtrunA17_Chr2g0331781 | 47.079 | 291 | 123 | 8 | 7 | 269 | 13 | 300 | 2.19e-71 | 228 |
| Msa0195080 | MtrunA17_Chr2g0331781 | 29.545 | 176 | 109 | 4 | 230 | 404 | 121 | 282 | 5.85e-14 | 72.8 |
| Msa0195080 | MtrunA17_Chr1g0202281 | 45.725 | 269 | 119 | 8 | 21 | 269 | 36 | 297 | 3.78e-68 | 218 |
| Msa0195080 | MtrunA17_Chr1g0202281 | 40.278 | 72 | 40 | 2 | 312 | 382 | 189 | 258 | 6.49e-12 | 66.2 |
| Msa0195080 | MtrunA17_Chr8g0361941 | 46.099 | 282 | 124 | 9 | 24 | 283 | 23 | 298 | 4.80e-67 | 215 |
| Msa0195080 | MtrunA17_Chr8g0361941 | 42.105 | 95 | 49 | 4 | 312 | 404 | 177 | 267 | 8.13e-14 | 71.6 |
| Msa0195080 | MtrunA17_Chr2g0300151 | 55.921 | 152 | 53 | 3 | 1 | 139 | 1 | 151 | 6.22e-47 | 158 |
| Msa0195080 | MtrunA17_Chr6g0459141 | 48.182 | 110 | 50 | 3 | 22 | 125 | 22 | 130 | 2.13e-25 | 103 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195080 | AT5G24090.1 | 43.478 | 299 | 145 | 8 | 1 | 279 | 4 | 298 | 1.31e-74 | 235 |
| Msa0195080 | AT5G24090.1 | 43.056 | 72 | 38 | 2 | 312 | 382 | 181 | 250 | 2.75e-12 | 67.4 |
Find 86 sgRNAs with CRISPR-Local
Find 307 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGACACAGCTATCAAAAT+TGG | 0.209040 | 2_1:+11760025 | Msa0195080:CDS |
| CCCATGAACACGGTATTATT+TGG | 0.228231 | 2_1:-11757186 | None:intergenic |
| AACTTTCTTAGTGGTCAATT+TGG | 0.254606 | 2_1:+11755756 | Msa0195080:CDS |
| TTGGCTTTCCTAAATGTCTT+TGG | 0.269153 | 2_1:+11755540 | Msa0195080:CDS |
| CTTGACAAAGCTATCAAAAC+TGG | 0.277903 | 2_1:+11757045 | Msa0195080:CDS |
| TTCCTCCTCCAAAGACATTT+AGG | 0.281897 | 2_1:-11755548 | None:intergenic |
| ATAGTTGGAAGTTGGTTTAA+TGG | 0.284816 | 2_1:-11757286 | None:intergenic |
| GTCAAAATCAATACCATCTA+AGG | 0.296854 | 2_1:-11755796 | None:intergenic |
| CTTGGAAGTGTTACCTTAGA+TGG | 0.298818 | 2_1:+11755783 | Msa0195080:CDS |
| AAGGAGGTACAAATCTTTAC+TGG | 0.304361 | 2_1:+11755823 | Msa0195080:intron |
| ATTAAACCAACTTCCAACTA+TGG | 0.306183 | 2_1:+11757288 | Msa0195080:CDS |
| AACACAAAATGGATAGAAAA+AGG | 0.309689 | 2_1:+11755367 | None:intergenic |
| AGGTGCCATCTCCTAGGTTT+TGG | 0.325186 | 2_1:-11755476 | None:intergenic |
| ACCAGATGATCTCATTTCTA+AGG | 0.326123 | 2_1:+11757254 | Msa0195080:intron |
| GTGGTGGCATTGCCATCTAC+TGG | 0.335903 | 2_1:+11755451 | Msa0195080:CDS |
| ATAATCTGGCATAATACATT+TGG | 0.349220 | 2_1:-11759999 | None:intergenic |
| CTTTCGATCGGAGGTGCAAT+AGG | 0.351560 | 2_1:+11755675 | Msa0195080:CDS |
| CTCCATACTAACTTTCTTAG+TGG | 0.352431 | 2_1:+11755747 | Msa0195080:CDS |
| CATAAATCCTCCACACTTAC+GGG | 0.365978 | 2_1:-11760256 | None:intergenic |
| ATAAAACACTGTCAACAAAA+AGG | 0.366978 | 2_1:+11755639 | Msa0195080:CDS |
| TCTTAAAATCATGGAAAGAT+TGG | 0.373901 | 2_1:+11757148 | Msa0195080:CDS |
| ACCAAATAATACCGTGTTCA+TGG | 0.382839 | 2_1:+11757185 | Msa0195080:CDS |
| GTAATCTGGCATAAAACATT+GGG | 0.383173 | 2_1:-11757019 | None:intergenic |
| TAATTACAAGATTGTACTCT+TGG | 0.383216 | 2_1:+11755521 | Msa0195080:CDS |
| GACCACTAAGAAAGTTAGTA+TGG | 0.384451 | 2_1:-11755749 | None:intergenic |
| CTACATTGCTCTTTCAATCA+TGG | 0.388911 | 2_1:+11760119 | Msa0195080:CDS |
| CTATGGAGGAATTATGCTTT+GGG | 0.391332 | 2_1:+11757305 | Msa0195080:CDS |
| ACTATGGAGGAATTATGCTT+TGG | 0.402308 | 2_1:+11757304 | Msa0195080:CDS |
| CTACATTGCTCTTAAAATCA+TGG | 0.423108 | 2_1:+11757139 | Msa0195080:CDS |
| TCATAAATCCTCCACACTTA+CGG | 0.424053 | 2_1:-11760257 | None:intergenic |
| TGATTACAGCTATCAGATAA+AGG | 0.427454 | 2_1:+11757353 | Msa0195080:CDS |
| TAATCTGGCATAATACATTT+GGG | 0.435074 | 2_1:-11759998 | None:intergenic |
| TTAGAAATGAGATCATTTGA+TGG | 0.435572 | 2_1:-11760201 | None:intergenic |
| TGGTGGCATTGCCATCTACT+GGG | 0.446566 | 2_1:+11755452 | Msa0195080:CDS |
| GCTTTCCTAAATGTCTTTGG+AGG | 0.450110 | 2_1:+11755543 | Msa0195080:CDS |
| TGGGATAGATTTCATGATGT+TGG | 0.451538 | 2_1:+11757324 | Msa0195080:CDS |
| TCTTTCAATCATGGGATGCT+TGG | 0.452854 | 2_1:+11760128 | Msa0195080:CDS |
| GCTTGATCATATTGACATGA+AGG | 0.458306 | 2_1:-11760085 | None:intergenic |
| ACAATCTAAGACAACAAAAC+AGG | 0.458920 | 2_1:+11755868 | Msa0195080:CDS |
| AAGCATAATTCCTCCATAGT+TGG | 0.460777 | 2_1:-11757301 | None:intergenic |
| ATGTCAAGGTGCCATCTCCT+AGG | 0.479456 | 2_1:-11755482 | None:intergenic |
| TACATTGCTCTTTCAATCAT+GGG | 0.479487 | 2_1:+11760120 | Msa0195080:CDS |
| CAAGTTTCAGAGGCAATAGC+TGG | 0.480314 | 2_1:+11757411 | Msa0195080:CDS |
| CCACCACTAGGAGCTGCATT+AGG | 0.480850 | 2_1:-11757222 | None:intergenic |
| TTGCAGGTCATTGTGGTGAC+TGG | 0.481375 | 2_1:+11755589 | Msa0195080:intron |
| ATTTGATGGTATAAAGATGT+TGG | 0.481871 | 2_1:-11760187 | None:intergenic |
| ATTCCTCCATAGTTGGAAGT+TGG | 0.484513 | 2_1:-11757294 | None:intergenic |
| GCTGTGTCAAGGTAATAATC+TGG | 0.485515 | 2_1:-11760013 | None:intergenic |
| TTTGTTGTCTTAGATTGTCA+AGG | 0.485852 | 2_1:-11755863 | None:intergenic |
| GCTTTGTCAAGGTAGTAATC+TGG | 0.487955 | 2_1:-11757033 | None:intergenic |
| TTCCTAAATGTCTTTGGAGG+AGG | 0.495140 | 2_1:+11755546 | Msa0195080:CDS |
| TTTACTGGGATGACCTTGCT+AGG | 0.501225 | 2_1:+11755838 | Msa0195080:CDS |
| CCAAATAATACCGTGTTCAT+GGG | 0.512696 | 2_1:+11757186 | Msa0195080:CDS |
| AGTAATCTGGCATAAAACAT+TGG | 0.515532 | 2_1:-11757020 | None:intergenic |
| TTGGAAGTTGGTTTAATGGA+AGG | 0.522478 | 2_1:-11757282 | None:intergenic |
| CTTGATCATATTGACATGAA+GGG | 0.522737 | 2_1:-11760084 | None:intergenic |
| GGAGCTGCATTAGGTGCTGC+TGG | 0.526335 | 2_1:-11757213 | None:intergenic |
| TTATATCATATTGACATGGA+GGG | 0.540692 | 2_1:-11757104 | None:intergenic |
| TGAAGATGCTTTGATAGTGA+AGG | 0.540737 | 2_1:-11755427 | None:intergenic |
| GAAGATGCTTTGATAGTGAA+GGG | 0.554870 | 2_1:-11755426 | None:intergenic |
| AGTGGTCAATTTGGTCCACT+TGG | 0.566066 | 2_1:+11755765 | Msa0195080:CDS |
| TTACTGGGATGACCTTGCTA+GGG | 0.587273 | 2_1:+11755839 | Msa0195080:CDS |
| AGGAGGTACAAATCTTTACT+GGG | 0.587554 | 2_1:+11755824 | Msa0195080:intron |
| GATTGTCAAGGTCCCTAGCA+AGG | 0.595500 | 2_1:-11755851 | None:intergenic |
| TTTATATCATATTGACATGG+AGG | 0.598528 | 2_1:-11757105 | None:intergenic |
| ATCTACTGGGGCCAAAACCT+AGG | 0.601014 | 2_1:+11755465 | Msa0195080:CDS |
| TTGACATCAACATGTAACAC+TGG | 0.610391 | 2_1:+11755498 | Msa0195080:CDS |
| TGCTGGTAGTCCCATGAACA+CGG | 0.611631 | 2_1:-11757196 | None:intergenic |
| ATCAAAGCATCTTCAAGTGG+TGG | 0.612068 | 2_1:+11755435 | Msa0195080:CDS |
| TGGGGCCAAAACCTAGGAGA+TGG | 0.618215 | 2_1:+11755471 | Msa0195080:CDS |
| TTCTGGTGAGCTAAGAGTGT+AGG | 0.618334 | 2_1:-11755700 | None:intergenic |
| ACTTGTCATACCCGTAAGTG+TGG | 0.621407 | 2_1:+11760246 | Msa0195080:CDS |
| TTGACAAAGCTATCAAAACT+GGG | 0.637442 | 2_1:+11757046 | Msa0195080:CDS |
| AAACCAACTTCCAACTATGG+AGG | 0.642148 | 2_1:+11757291 | Msa0195080:CDS |
| ACTATCAAAGCATCTTCAAG+TGG | 0.643897 | 2_1:+11755432 | Msa0195080:CDS |
| TGGAACTTTGCAGGTCATTG+TGG | 0.646397 | 2_1:+11755582 | Msa0195080:intron |
| GCACCTAATGCAGCTCCTAG+TGG | 0.656531 | 2_1:+11757219 | Msa0195080:CDS |
| AGTGTTACATGTTGATGTCA+AGG | 0.656681 | 2_1:-11755496 | None:intergenic |
| TGTCATACCCGTAAGTGTGG+AGG | 0.657655 | 2_1:+11760249 | Msa0195080:CDS |
| GGTGGCATTGCCATCTACTG+GGG | 0.662894 | 2_1:+11755453 | Msa0195080:CDS |
| CCTAATGCAGCTCCTAGTGG+TGG | 0.665138 | 2_1:+11757222 | Msa0195080:CDS |
| CACTAAGAAAGTTAGTATGG+AGG | 0.672810 | 2_1:-11755746 | None:intergenic |
| TAATCTGGCATAAAACATTG+GGG | 0.688163 | 2_1:-11757018 | None:intergenic |
| GGTGGTATATAACCACCACT+AGG | 0.701616 | 2_1:-11757234 | None:intergenic |
| ATATTGTTAAGACTAACAGA+AGG | 0.710230 | 2_1:-11755401 | None:intergenic |
| TCTAAGGTAACACTTCCAAG+TGG | 0.714737 | 2_1:-11755780 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATATATTATAAAAAAATA+TGG | + | chr2_1:11759326-11759345 | Msa0195080:intron | 0.0% |
| !!! | TATTTTTCTTTGAAAAAATA+TGG | - | chr2_1:11756313-11756332 | None:intergenic | 10.0% |
| !! | TAATAATAATTAAACATTGA+AGG | - | chr2_1:11759536-11759555 | None:intergenic | 10.0% |
| !! | AAAATCTTAAATCTTAAATA+TGG | - | chr2_1:11759668-11759687 | None:intergenic | 10.0% |
| !!! | TTTTCAAAGAAAAATATGTA+TGG | + | chr2_1:11756317-11756336 | Msa0195080:intron | 15.0% |
| !!! | TATAAGAGAAAGTATAATAT+AGG | + | chr2_1:11756426-11756445 | Msa0195080:intron | 15.0% |
| !!! | TAATTTTGTTTTATTAACAG+TGG | + | chr2_1:11756725-11756744 | Msa0195080:intron | 15.0% |
| !!! | ACATAAAATCTTTTGAATTT+TGG | - | chr2_1:11758076-11758095 | None:intergenic | 15.0% |
| !! | TTTATATTAAGAAGAAAAAG+AGG | + | chr2_1:11758481-11758500 | Msa0195080:intron | 15.0% |
| !! | AAGTTGTCATATTTATTAAT+TGG | - | chr2_1:11758569-11758588 | None:intergenic | 15.0% |
| !! | ATAAAATCATGTTACATTAT+CGG | + | chr2_1:11758643-11758662 | Msa0195080:intron | 15.0% |
| !! | AAAAAAAAAACAGTGTTAAA+CGG | - | chr2_1:11758816-11758835 | None:intergenic | 15.0% |
| !!! | TTTTTTATAAAATTGGGATG+TGG | - | chr2_1:11756040-11756059 | None:intergenic | 20.0% |
| !! | AAAAAATATGGTTGTTCATT+AGG | - | chr2_1:11756301-11756320 | None:intergenic | 20.0% |
| !! | AAATATAATGTGAGTATAAG+AGG | + | chr2_1:11756372-11756391 | Msa0195080:intron | 20.0% |
| !! | ATATTCACATTATACACTTT+AGG | - | chr2_1:11756409-11756428 | None:intergenic | 20.0% |
| !! | GAATGATAAACATTATATGA+GGG | - | chr2_1:11756892-11756911 | None:intergenic | 20.0% |
| !! | TGAATGATAAACATTATATG+AGG | - | chr2_1:11756893-11756912 | None:intergenic | 20.0% |
| !!! | AAAGGTTGATTTGTTAATTA+GGG | - | chr2_1:11756964-11756983 | None:intergenic | 20.0% |
| !!! | AAAAGGTTGATTTGTTAATT+AGG | - | chr2_1:11756965-11756984 | None:intergenic | 20.0% |
| !!! | CTTTTTATATCATATTGACA+TGG | - | chr2_1:11757111-11757130 | None:intergenic | 20.0% |
| !! | GCGTAAAATATGATTTAATT+CGG | - | chr2_1:11757468-11757487 | None:intergenic | 20.0% |
| !! | ACTATATATATGTATGAGTA+TGG | + | chr2_1:11757495-11757514 | Msa0195080:intron | 20.0% |
| !! | ATTAAGAAAGAAAAATGATC+AGG | + | chr2_1:11757575-11757594 | Msa0195080:intron | 20.0% |
| !! | TAGGTACATAATATACATAA+AGG | - | chr2_1:11757620-11757639 | None:intergenic | 20.0% |
| !!! | TAAAATCTTTTGAATTTTGG+TGG | - | chr2_1:11758073-11758092 | None:intergenic | 20.0% |
| !!! | AAACAGATTGAGTTTTATTT+TGG | + | chr2_1:11758323-11758342 | Msa0195080:intron | 20.0% |
| !! | ATTGAATGCACAAAATTATA+TGG | + | chr2_1:11758911-11758930 | Msa0195080:intron | 20.0% |
| !! | TAAAGTAATTAAAGCTTAGT+TGG | + | chr2_1:11758991-11759010 | Msa0195080:intron | 20.0% |
| !! | TGGATATAAATTGTTTAATC+CGG | - | chr2_1:11759274-11759293 | None:intergenic | 20.0% |
| !! | TCAGTTCATCAATATTATAT+TGG | + | chr2_1:11759455-11759474 | Msa0195080:intron | 20.0% |
| !! | GTGTTTATGAGTAAAAAAAA+TGG | - | chr2_1:11759940-11759959 | None:intergenic | 20.0% |
| ! | ATATTGTTAAGACTAACAGA+AGG | - | chr2_1:11755404-11755423 | None:intergenic | 25.0% |
| ! | TAATTACAAGATTGTACTCT+TGG | + | chr2_1:11755521-11755540 | Msa0195080:CDS | 25.0% |
| !!! | TTGTTGACAGTGTTTTATTT+CGG | - | chr2_1:11755637-11755656 | None:intergenic | 25.0% |
| ! | ATAAAACACTGTCAACAAAA+AGG | + | chr2_1:11755639-11755658 | Msa0195080:CDS | 25.0% |
| ! | TTAGGATGTTAAATAAAACG+TGG | - | chr2_1:11756283-11756302 | None:intergenic | 25.0% |
| ! | CTAAACAAAAATTCCACTTT+AGG | - | chr2_1:11756489-11756508 | None:intergenic | 25.0% |
| !!! | CTAAAGTGGAATTTTTGTTT+AGG | + | chr2_1:11756487-11756506 | Msa0195080:intron | 25.0% |
| !! | TAGTTAGTGGTTTGAAATAA+GGG | + | chr2_1:11756757-11756776 | Msa0195080:intron | 25.0% |
| ! | TTATATCATATTGACATGGA+GGG | - | chr2_1:11757107-11757126 | None:intergenic | 25.0% |
| ! | TTTATATCATATTGACATGG+AGG | - | chr2_1:11757108-11757127 | None:intergenic | 25.0% |
| ! | TCTTAAAATCATGGAAAGAT+TGG | + | chr2_1:11757148-11757167 | Msa0195080:CDS | 25.0% |
| ! | TATGATTTAATTCGGAAACA+TGG | - | chr2_1:11757460-11757479 | None:intergenic | 25.0% |
| !!! | TTTGATTTTTAGTGCAACAA+AGG | + | chr2_1:11757940-11757959 | Msa0195080:intron | 25.0% |
| ! | ATGTAGAAAATAGGGATAAT+TGG | + | chr2_1:11758253-11758272 | Msa0195080:intron | 25.0% |
| ! | ACAATATACAAGAACAAGAA+TGG | + | chr2_1:11758789-11758808 | Msa0195080:intron | 25.0% |
| ! | AGTTTACATAGATGTTAAAC+CGG | + | chr2_1:11759252-11759271 | Msa0195080:intron | 25.0% |
| ! | ATAAAACAAATAGCTATCAG+TGG | + | chr2_1:11759572-11759591 | Msa0195080:intron | 25.0% |
| ! | TAAATCTTAAATATGGCTCA+TGG | - | chr2_1:11759661-11759680 | None:intergenic | 25.0% |
| !!! | GCGCGTTTTTTTTTTTTTTT+TGG | - | chr2_1:11759710-11759729 | None:intergenic | 25.0% |
| !!! | TTTTTAAAACTATGCTTCCT+AGG | + | chr2_1:11759882-11759901 | Msa0195080:intron | 25.0% |
| !!! | TTTTAAAACTATGCTTCCTA+GGG | + | chr2_1:11759883-11759902 | Msa0195080:intron | 25.0% |
| ! | ATGGGTGAAAATATAACTTT+CGG | + | chr2_1:11759913-11759932 | Msa0195080:intron | 25.0% |
| ! | TAATCTGGCATAATACATTT+GGG | - | chr2_1:11760001-11760020 | None:intergenic | 25.0% |
| ! | ATAATCTGGCATAATACATT+TGG | - | chr2_1:11760002-11760021 | None:intergenic | 25.0% |
| !! | ATTTGATGGTATAAAGATGT+TGG | - | chr2_1:11760190-11760209 | None:intergenic | 25.0% |
| ! | TTAGAAATGAGATCATTTGA+TGG | - | chr2_1:11760204-11760223 | None:intergenic | 25.0% |
| !!! | TGTTGACAGTGTTTTATTTC+GGG | - | chr2_1:11755636-11755655 | None:intergenic | 30.0% |
| ! | GTCAAAGTTTTACTTTCGAT+CGG | + | chr2_1:11755663-11755682 | Msa0195080:CDS | 30.0% |
| AACTTTCTTAGTGGTCAATT+TGG | + | chr2_1:11755756-11755775 | Msa0195080:CDS | 30.0% | |
| GTCAAAATCAATACCATCTA+AGG | - | chr2_1:11755799-11755818 | None:intergenic | 30.0% | |
| !!! | GGTATTGATTTTGACATTGA+AGG | + | chr2_1:11755804-11755823 | Msa0195080:intron | 30.0% |
| !! | ATTGATTTTGACATTGAAGG+AGG | + | chr2_1:11755807-11755826 | Msa0195080:intron | 30.0% |
| ! | TTTGTTGTCTTAGATTGTCA+AGG | - | chr2_1:11755866-11755885 | None:intergenic | 30.0% |
| ! | ACAATCTAAGACAACAAAAC+AGG | + | chr2_1:11755868-11755887 | Msa0195080:CDS | 30.0% |
| !! | TATAGTTTCAAGTTGTACAG+CGG | - | chr2_1:11755952-11755971 | None:intergenic | 30.0% |
| ATGACATAGAGATATCAGAA+AGG | - | chr2_1:11756143-11756162 | None:intergenic | 30.0% | |
| !! | AATGTTAACTTGTGCTCTTA+GGG | + | chr2_1:11756449-11756468 | Msa0195080:intron | 30.0% |
| TATGCTAACTTGAGTTCTTA+GGG | - | chr2_1:11756597-11756616 | None:intergenic | 30.0% | |
| TTATGCTAACTTGAGTTCTT+AGG | - | chr2_1:11756598-11756617 | None:intergenic | 30.0% | |
| AGAAATGTTCTACTTCTACT+AGG | - | chr2_1:11756655-11756674 | None:intergenic | 30.0% | |
| ! | GTAGTTAGTGGTTTGAAATA+AGG | + | chr2_1:11756756-11756775 | Msa0195080:intron | 30.0% |
| ! | AGTTAGTGGTTTGAAATAAG+GGG | + | chr2_1:11756758-11756777 | Msa0195080:intron | 30.0% |
| TTATATGAGGGCAATTTCTA+CGG | - | chr2_1:11756880-11756899 | None:intergenic | 30.0% | |
| TAATCTGGCATAAAACATTG+GGG | - | chr2_1:11757021-11757040 | None:intergenic | 30.0% | |
| GTAATCTGGCATAAAACATT+GGG | - | chr2_1:11757022-11757041 | None:intergenic | 30.0% | |
| AGTAATCTGGCATAAAACAT+TGG | - | chr2_1:11757023-11757042 | None:intergenic | 30.0% | |
| TTGACAAAGCTATCAAAACT+GGG | + | chr2_1:11757046-11757065 | Msa0195080:CDS | 30.0% | |
| CTACATTGCTCTTAAAATCA+TGG | + | chr2_1:11757139-11757158 | Msa0195080:CDS | 30.0% | |
| ! | ATAGTTGGAAGTTGGTTTAA+TGG | - | chr2_1:11757289-11757308 | None:intergenic | 30.0% |
| ATTAAACCAACTTCCAACTA+TGG | + | chr2_1:11757288-11757307 | Msa0195080:CDS | 30.0% | |
| TGATTACAGCTATCAGATAA+AGG | + | chr2_1:11757353-11757372 | Msa0195080:CDS | 30.0% | |
| !!! | TTTTAAGACACAAGTTTCAG+AGG | + | chr2_1:11757401-11757420 | Msa0195080:CDS | 30.0% |
| ATCTATAACCATCGTAAAGT+TGG | - | chr2_1:11757549-11757568 | None:intergenic | 30.0% | |
| ACTTCAAATTAGAAGTAACC+AGG | + | chr2_1:11758006-11758025 | Msa0195080:intron | 30.0% | |
| ! | TGCATGTAGAAAAGGTTTTA+TGG | + | chr2_1:11758105-11758124 | Msa0195080:intron | 30.0% |
| !! | ATGTAGAAAAGGTTTTATGG+CGG | + | chr2_1:11758108-11758127 | Msa0195080:intron | 30.0% |
| !! | TGCTTTCTGAAAGGATATTT+TGG | + | chr2_1:11758160-11758179 | Msa0195080:intron | 30.0% |
| !! | TTTCTGAAAGGATATTTTGG+AGG | + | chr2_1:11758163-11758182 | Msa0195080:intron | 30.0% |
| !! | TTCTGAAAGGATATTTTGGA+GGG | + | chr2_1:11758164-11758183 | Msa0195080:intron | 30.0% |
| CATTGTGGATGTAGAAAATA+GGG | + | chr2_1:11758245-11758264 | Msa0195080:intron | 30.0% | |
| AAAATAGGGATAATTGGAAG+TGG | + | chr2_1:11758259-11758278 | Msa0195080:intron | 30.0% | |
| !!! | CCTAGCATAGTTTTAAAACT+CGG | + | chr2_1:11759099-11759118 | Msa0195080:intron | 30.0% |
| !!! | GGAAGCATAGTTTTAAAAAC+CGG | - | chr2_1:11759881-11759900 | None:intergenic | 30.0% |
| ! | AAACACTGACTAACAATTAC+AGG | + | chr2_1:11759954-11759973 | Msa0195080:intron | 30.0% |
| CTTGATCATATTGACATGAA+GGG | - | chr2_1:11760087-11760106 | None:intergenic | 30.0% | |
| TACATTGCTCTTTCAATCAT+GGG | + | chr2_1:11760120-11760139 | Msa0195080:CDS | 30.0% | |
| ! | GCTACATATTATGTTTTCTG+TGG | + | chr2_1:11760160-11760179 | Msa0195080:CDS | 30.0% |
| !! | GAAGATGCTTTGATAGTGAA+GGG | - | chr2_1:11755429-11755448 | None:intergenic | 35.0% |
| !! | TGAAGATGCTTTGATAGTGA+AGG | - | chr2_1:11755430-11755449 | None:intergenic | 35.0% |
| ! | ACTATCAAAGCATCTTCAAG+TGG | + | chr2_1:11755432-11755451 | Msa0195080:CDS | 35.0% |
| AGTGTTACATGTTGATGTCA+AGG | - | chr2_1:11755499-11755518 | None:intergenic | 35.0% | |
| TTGACATCAACATGTAACAC+TGG | + | chr2_1:11755498-11755517 | Msa0195080:CDS | 35.0% | |
| ! | TTGGCTTTCCTAAATGTCTT+TGG | + | chr2_1:11755540-11755559 | Msa0195080:CDS | 35.0% |
| ! | AAAGTTTTACTTTCGATCGG+AGG | + | chr2_1:11755666-11755685 | Msa0195080:CDS | 35.0% |
| !!! | GCAACATTTTTAGCATCTTC+TGG | - | chr2_1:11755720-11755739 | None:intergenic | 35.0% |
| CACTAAGAAAGTTAGTATGG+AGG | - | chr2_1:11755749-11755768 | None:intergenic | 35.0% | |
| CTCCATACTAACTTTCTTAG+TGG | + | chr2_1:11755747-11755766 | Msa0195080:CDS | 35.0% | |
| GACCACTAAGAAAGTTAGTA+TGG | - | chr2_1:11755752-11755771 | None:intergenic | 35.0% | |
| ! | AAGGAGGTACAAATCTTTAC+TGG | + | chr2_1:11755823-11755842 | Msa0195080:intron | 35.0% |
| ! | AGGAGGTACAAATCTTTACT+GGG | + | chr2_1:11755824-11755843 | Msa0195080:intron | 35.0% |
| ! | AAGATGAAGAACCCTGTTTT+GGG | - | chr2_1:11756091-11756110 | None:intergenic | 35.0% |
| CTTATTCTTTACGCACACAA+AGG | - | chr2_1:11756205-11756224 | None:intergenic | 35.0% | |
| CTTTGTGTGCGTAAAGAATA+AGG | + | chr2_1:11756203-11756222 | Msa0195080:intron | 35.0% | |
| !! | GAATGTTAACTTGTGCTCTT+AGG | + | chr2_1:11756448-11756467 | Msa0195080:intron | 35.0% |
| ACATGTTAAGGAACCTAAAG+TGG | + | chr2_1:11756473-11756492 | Msa0195080:intron | 35.0% | |
| TAGGAGTAGAGTTTATGAAG+TGG | - | chr2_1:11756636-11756655 | None:intergenic | 35.0% | |
| GTGGTTAATAGAGTAGTTAG+TGG | + | chr2_1:11756744-11756763 | Msa0195080:intron | 35.0% | |
| ! | ATCAACCTTTTATCTCTTGC+AGG | + | chr2_1:11756974-11756993 | Msa0195080:intron | 35.0% |
| AAGTACCTGCAAGAGATAAA+AGG | - | chr2_1:11756982-11757001 | None:intergenic | 35.0% | |
| !!! | CAGTTTTGATAGCTTTGTCA+AGG | - | chr2_1:11757047-11757066 | None:intergenic | 35.0% |
| CTTGACAAAGCTATCAAAAC+TGG | + | chr2_1:11757045-11757064 | Msa0195080:CDS | 35.0% | |
| ACCAAATAATACCGTGTTCA+TGG | + | chr2_1:11757185-11757204 | Msa0195080:CDS | 35.0% | |
| CCAAATAATACCGTGTTCAT+GGG | + | chr2_1:11757186-11757205 | Msa0195080:CDS | 35.0% | |
| TTAGAAATGAGATCATCTGG+TGG | - | chr2_1:11757255-11757274 | None:intergenic | 35.0% | |
| ACCAGATGATCTCATTTCTA+AGG | + | chr2_1:11757254-11757273 | Msa0195080:intron | 35.0% | |
| ACCTTAGAAATGAGATCATC+TGG | - | chr2_1:11757258-11757277 | None:intergenic | 35.0% | |
| ! | TTGGAAGTTGGTTTAATGGA+AGG | - | chr2_1:11757285-11757304 | None:intergenic | 35.0% |
| AAGCATAATTCCTCCATAGT+TGG | - | chr2_1:11757304-11757323 | None:intergenic | 35.0% | |
| ACTATGGAGGAATTATGCTT+TGG | + | chr2_1:11757304-11757323 | Msa0195080:CDS | 35.0% | |
| CTATGGAGGAATTATGCTTT+GGG | + | chr2_1:11757305-11757324 | Msa0195080:CDS | 35.0% | |
| TGGGATAGATTTCATGATGT+TGG | + | chr2_1:11757324-11757343 | Msa0195080:CDS | 35.0% | |
| AAGGTTTACATGAAAACGTG+GGG | - | chr2_1:11757657-11757676 | None:intergenic | 35.0% | |
| CAAGGTTTACATGAAAACGT+GGG | - | chr2_1:11757658-11757677 | None:intergenic | 35.0% | |
| ! | CACGTTTTCATGTAAACCTT+GGG | + | chr2_1:11757657-11757676 | Msa0195080:intron | 35.0% |
| GTCTTCTCTTATGTATGTAC+TGG | + | chr2_1:11757689-11757708 | Msa0195080:intron | 35.0% | |
| GATCTGATGAAACATCACTA+CGG | + | chr2_1:11757899-11757918 | Msa0195080:intron | 35.0% | |
| ATCTGATGAAACATCACTAC+GGG | + | chr2_1:11757900-11757919 | Msa0195080:intron | 35.0% | |
| TTAGTGCAACAAAGGAAACA+TGG | + | chr2_1:11757948-11757967 | Msa0195080:intron | 35.0% | |
| ATCATCTTCACAAAAGAACC+TGG | - | chr2_1:11758027-11758046 | None:intergenic | 35.0% | |
| ! | AAACCTTTTCTACATGCATC+AGG | - | chr2_1:11758103-11758122 | None:intergenic | 35.0% |
| !! | TGTAGAAAAGGTTTTATGGC+GGG | + | chr2_1:11758109-11758128 | Msa0195080:intron | 35.0% |
| TTAGATGGATGCTTTCTGAA+AGG | + | chr2_1:11758151-11758170 | Msa0195080:intron | 35.0% | |
| ! | CCTATTTTCTACATCCACAA+TGG | - | chr2_1:11758247-11758266 | None:intergenic | 35.0% |
| CCATTGTGGATGTAGAAAAT+AGG | + | chr2_1:11758244-11758263 | Msa0195080:intron | 35.0% | |
| ! | GTTTTTGACACTATTGCATC+AGG | + | chr2_1:11758281-11758300 | Msa0195080:intron | 35.0% |
| !!! | CCGAGTTTTAAAACTATGCT+AGG | - | chr2_1:11759102-11759121 | None:intergenic | 35.0% |
| !!! | CATAGTTTTAAAACTCGGAC+CGG | + | chr2_1:11759104-11759123 | Msa0195080:intron | 35.0% |
| TTTAATCCGATTCAGTCATG+CGG | - | chr2_1:11759195-11759214 | None:intergenic | 35.0% | |
| ATGACTGAATCGGATTAAAC+CGG | + | chr2_1:11759196-11759215 | Msa0195080:intron | 35.0% | |
| !!! | CATAGTTTTAAAAACCGGCT+CGG | - | chr2_1:11759876-11759895 | None:intergenic | 35.0% |
| !! | CAATTTTGATAGCTGTGTCA+AGG | - | chr2_1:11760027-11760046 | None:intergenic | 35.0% |
| CTTGACACAGCTATCAAAAT+TGG | + | chr2_1:11760025-11760044 | Msa0195080:CDS | 35.0% | |
| GCTTGATCATATTGACATGA+AGG | - | chr2_1:11760088-11760107 | None:intergenic | 35.0% | |
| CTACATTGCTCTTTCAATCA+TGG | + | chr2_1:11760119-11760138 | Msa0195080:CDS | 35.0% | |
| !! | TGACAAGTTTTGTCAATGTG+AGG | - | chr2_1:11760234-11760253 | None:intergenic | 35.0% |
| TCATAAATCCTCCACACTTA+CGG | - | chr2_1:11760260-11760279 | None:intergenic | 35.0% | |
| ! | ATCAAAGCATCTTCAAGTGG+TGG | + | chr2_1:11755435-11755454 | Msa0195080:CDS | 40.0% |
| GCTTTCCTAAATGTCTTTGG+AGG | + | chr2_1:11755543-11755562 | Msa0195080:CDS | 40.0% | |
| ! | TTCCTAAATGTCTTTGGAGG+AGG | + | chr2_1:11755546-11755565 | Msa0195080:CDS | 40.0% |
| TTCCTCCTCCAAAGACATTT+AGG | - | chr2_1:11755551-11755570 | None:intergenic | 40.0% | |
| ! | TCTAAGGTAACACTTCCAAG+TGG | - | chr2_1:11755783-11755802 | None:intergenic | 40.0% |
| !! | CTTGGAAGTGTTACCTTAGA+TGG | + | chr2_1:11755783-11755802 | Msa0195080:CDS | 40.0% |
| ! | GAAGATGAAGAACCCTGTTT+TGG | - | chr2_1:11756092-11756111 | None:intergenic | 40.0% |
| GCGTAAAGAATAAGGTTGCT+TGG | + | chr2_1:11756211-11756230 | Msa0195080:intron | 40.0% | |
| AGACCAAAGAAACTGGCATA+TGG | + | chr2_1:11756235-11756254 | Msa0195080:intron | 40.0% | |
| AAGCCATATGCCAGTTTCTT+TGG | - | chr2_1:11756241-11756260 | None:intergenic | 40.0% | |
| AAAGAAACTGGCATATGGCT+TGG | + | chr2_1:11756240-11756259 | Msa0195080:intron | 40.0% | |
| AAGAAACTGGCATATGGCTT+GGG | + | chr2_1:11756241-11756260 | Msa0195080:intron | 40.0% | |
| AAAACGTGGTGTCTTGTCTT+TGG | - | chr2_1:11756269-11756288 | None:intergenic | 40.0% | |
| ! | CAGGTACTTTTACTTGTCTG+CGG | + | chr2_1:11756993-11757012 | Msa0195080:intron | 40.0% |
| GCTTTGTCAAGGTAGTAATC+TGG | - | chr2_1:11757036-11757055 | None:intergenic | 40.0% | |
| CCCATGAACACGGTATTATT+TGG | - | chr2_1:11757189-11757208 | None:intergenic | 40.0% | |
| AAACCAACTTCCAACTATGG+AGG | + | chr2_1:11757291-11757310 | Msa0195080:CDS | 40.0% | |
| ATTCCTCCATAGTTGGAAGT+TGG | - | chr2_1:11757297-11757316 | None:intergenic | 40.0% | |
| TGGGGAATCAAAGTGTAACT+AGG | - | chr2_1:11757639-11757658 | None:intergenic | 40.0% | |
| CCAAGGTTTACATGAAAACG+TGG | - | chr2_1:11757659-11757678 | None:intergenic | 40.0% | |
| ! | CCACGTTTTCATGTAAACCT+TGG | + | chr2_1:11757656-11757675 | Msa0195080:intron | 40.0% |
| TCTGATGAAACATCACTACG+GGG | + | chr2_1:11757901-11757920 | Msa0195080:intron | 40.0% | |
| AACAAAGGAAACATGGCAGT+TGG | + | chr2_1:11757955-11757974 | Msa0195080:intron | 40.0% | |
| AGTTGGTTGAAGGTAGTGAA+AGG | + | chr2_1:11757972-11757991 | Msa0195080:intron | 40.0% | |
| GTTGGTTGAAGGTAGTGAAA+GGG | + | chr2_1:11757973-11757992 | Msa0195080:intron | 40.0% | |
| TGGCGACTATGGAATTTGTA+TGG | - | chr2_1:11758053-11758072 | None:intergenic | 40.0% | |
| !!! | TTGAATTTTGGTGGCGACTA+TGG | - | chr2_1:11758064-11758083 | None:intergenic | 40.0% |
| TGTCCTGATGCATGTAGAAA+AGG | + | chr2_1:11758097-11758116 | Msa0195080:intron | 40.0% | |
| !! | AGGTCGTTGATTGGTTTAGA+TGG | + | chr2_1:11758136-11758155 | Msa0195080:intron | 40.0% |
| AGGGAAACTATTGTCTGTTG+TGG | + | chr2_1:11758183-11758202 | Msa0195080:intron | 40.0% | |
| TGTCATTGCTTATGCCATTG+TGG | + | chr2_1:11758230-11758249 | Msa0195080:intron | 40.0% | |
| ATCGAAGAACCTGTTACCTA+TGG | - | chr2_1:11759627-11759646 | None:intergenic | 40.0% | |
| GCTGTGTCAAGGTAATAATC+TGG | - | chr2_1:11760016-11760035 | None:intergenic | 40.0% | |
| TCTTTCAATCATGGGATGCT+TGG | + | chr2_1:11760128-11760147 | Msa0195080:CDS | 40.0% | |
| CATAAATCCTCCACACTTAC+GGG | - | chr2_1:11760259-11760278 | None:intergenic | 40.0% | |
| GACCTGCAAAGTTCCAACTT+GGG | - | chr2_1:11755578-11755597 | None:intergenic | 45.0% | |
| TGACCTGCAAAGTTCCAACT+TGG | - | chr2_1:11755579-11755598 | None:intergenic | 45.0% | |
| TGGAACTTTGCAGGTCATTG+TGG | + | chr2_1:11755582-11755601 | Msa0195080:intron | 45.0% | |
| !! | CGGGTTCGAGTTTTGTACAA+GGG | - | chr2_1:11755617-11755636 | None:intergenic | 45.0% |
| !! | TCGGGTTCGAGTTTTGTACA+AGG | - | chr2_1:11755618-11755637 | None:intergenic | 45.0% |
| ! | TTCTGGTGAGCTAAGAGTGT+AGG | - | chr2_1:11755703-11755722 | None:intergenic | 45.0% |
| AGTGGTCAATTTGGTCCACT+TGG | + | chr2_1:11755765-11755784 | Msa0195080:CDS | 45.0% | |
| TTTACTGGGATGACCTTGCT+AGG | + | chr2_1:11755838-11755857 | Msa0195080:CDS | 45.0% | |
| TTACTGGGATGACCTTGCTA+GGG | + | chr2_1:11755839-11755858 | Msa0195080:CDS | 45.0% | |
| !!! | GTTTTGGGATGTGGTCAAGA+AGG | - | chr2_1:11756076-11756095 | None:intergenic | 45.0% |
| TCTTGACCACATCCCAAAAC+AGG | + | chr2_1:11756076-11756095 | Msa0195080:intron | 45.0% | |
| CTTGACCACATCCCAAAACA+GGG | + | chr2_1:11756077-11756096 | Msa0195080:intron | 45.0% | |
| !!! | AAGAACCCTGTTTTGGGATG+TGG | - | chr2_1:11756085-11756104 | None:intergenic | 45.0% |
| GCTTGGTAGACCAAAGAAAC+TGG | + | chr2_1:11756228-11756247 | Msa0195080:intron | 45.0% | |
| TGCTCTTAGGGCACATGTTA+AGG | + | chr2_1:11756461-11756480 | Msa0195080:intron | 45.0% | |
| GGTGGTATATAACCACCACT+AGG | - | chr2_1:11757237-11757256 | None:intergenic | 45.0% | |
| CAAGTTTCAGAGGCAATAGC+TGG | + | chr2_1:11757411-11757430 | Msa0195080:CDS | 45.0% | |
| ! | CATCGTAAAGTTGGTCGTAC+AGG | - | chr2_1:11757540-11757559 | None:intergenic | 45.0% |
| CTGTACGACCAACTTTACGA+TGG | + | chr2_1:11757538-11757557 | Msa0195080:intron | 45.0% | |
| AGAAGACGCTTTGATTCCCA+AGG | - | chr2_1:11757676-11757695 | None:intergenic | 45.0% | |
| CACTACGGGGTTATACTTGA+TGG | + | chr2_1:11757914-11757933 | Msa0195080:intron | 45.0% | |
| GAAACATGGCAGTTGGTTGA+AGG | + | chr2_1:11757962-11757981 | Msa0195080:intron | 45.0% | |
| GGTAGTGAAAGGGAGTAGTA+TGG | + | chr2_1:11757983-11758002 | Msa0195080:intron | 45.0% | |
| !! | AAGGTTTTATGGCGGGATGT+AGG | + | chr2_1:11758116-11758135 | Msa0195080:intron | 45.0% |
| ACACTATTGCATCAGGAGCT+AGG | + | chr2_1:11758288-11758307 | Msa0195080:intron | 45.0% | |
| AAAATTTGCACCCCTGACCT+AGG | + | chr2_1:11758734-11758753 | Msa0195080:intron | 45.0% | |
| AAATTTGCACCCCTGACCTA+GGG | + | chr2_1:11758735-11758754 | Msa0195080:intron | 45.0% | |
| TGTCAAGATGCCTAACACAG+TGG | - | chr2_1:11758772-11758791 | None:intergenic | 45.0% | |
| GTTGAACCGCATGACTGAAT+CGG | + | chr2_1:11759186-11759205 | Msa0195080:intron | 45.0% | |
| TCGGATTAAACCGGATGACT+CGG | + | chr2_1:11759205-11759224 | Msa0195080:intron | 45.0% | |
| AGTCATACAACCGAGTCATC+CGG | - | chr2_1:11759218-11759237 | None:intergenic | 45.0% | |
| !! | GATGACTCGGTTGTATGACT+CGG | + | chr2_1:11759218-11759237 | Msa0195080:intron | 45.0% |
| AAGGATGCTATTCAACCGCT+GGG | - | chr2_1:11759598-11759617 | None:intergenic | 45.0% | |
| TGCATGGGCGATCCAATAAT+TGG | + | chr2_1:11759798-11759817 | Msa0195080:intron | 45.0% | |
| !! | GACTGGTTCGAGCCAATTAT+TGG | - | chr2_1:11759813-11759832 | None:intergenic | 45.0% |
| !!! | TTTTAAAAACCGGCTCGGAC+CGG | - | chr2_1:11759871-11759890 | None:intergenic | 45.0% |
| TGCTTCCTAGGGCTATATCA+TGG | + | chr2_1:11759894-11759913 | Msa0195080:intron | 45.0% | |
| GCTTCCTAGGGCTATATCAT+GGG | + | chr2_1:11759895-11759914 | Msa0195080:intron | 45.0% | |
| TTCACCCATGATATAGCCCT+AGG | - | chr2_1:11759902-11759921 | None:intergenic | 45.0% | |
| ACTTGTCATACCCGTAAGTG+TGG | + | chr2_1:11760246-11760265 | Msa0195080:CDS | 45.0% | |
| !!! | AATATCTTTTTTATAAAATT+GGG | - | chr2_1:11756046-11756065 | None:intergenic | 5.0% |
| !!! | AAATATCTTTTTTATAAAAT+TGG | - | chr2_1:11756047-11756066 | None:intergenic | 5.0% |
| !! | TAATAAATATTTAACATTTA+TGG | + | chr2_1:11756556-11756575 | Msa0195080:intron | 5.0% |
| !!! | AAAACATTTAATATTTTTAT+TGG | + | chr2_1:11758421-11758440 | Msa0195080:intron | 5.0% |
| !!! | AAACATTTAATATTTTTATT+GGG | + | chr2_1:11758422-11758441 | Msa0195080:intron | 5.0% |
| !! | ATTTATTATATTTATAGTTA+TGG | - | chr2_1:11759294-11759313 | None:intergenic | 5.0% |
| !!! | AATGTTTTATTTTTAATATT+AGG | - | chr2_1:11759436-11759455 | None:intergenic | 5.0% |
| TGGTGGCATTGCCATCTACT+GGG | + | chr2_1:11755452-11755471 | Msa0195080:CDS | 50.0% | |
| !! | TAGGTTTTGGCCCCAGTAGA+TGG | - | chr2_1:11755466-11755485 | None:intergenic | 50.0% |
| ATCTACTGGGGCCAAAACCT+AGG | + | chr2_1:11755465-11755484 | Msa0195080:CDS | 50.0% | |
| !! | AGGTGCCATCTCCTAGGTTT+TGG | - | chr2_1:11755479-11755498 | None:intergenic | 50.0% |
| ! | ATGTCAAGGTGCCATCTCCT+AGG | - | chr2_1:11755485-11755504 | None:intergenic | 50.0% |
| ! | GACCCAAGTTGGAACTTTGC+AGG | + | chr2_1:11755573-11755592 | Msa0195080:intron | 50.0% |
| TTGCAGGTCATTGTGGTGAC+TGG | + | chr2_1:11755589-11755608 | Msa0195080:intron | 50.0% | |
| ! | CTTTCGATCGGAGGTGCAAT+AGG | + | chr2_1:11755675-11755694 | Msa0195080:CDS | 50.0% |
| GATTGTCAAGGTCCCTAGCA+AGG | - | chr2_1:11755854-11755873 | None:intergenic | 50.0% | |
| AGGCACGTGCAACACAGATT+CGG | - | chr2_1:11756185-11756204 | None:intergenic | 50.0% | |
| TGCTGGTAGTCCCATGAACA+CGG | - | chr2_1:11757199-11757218 | None:intergenic | 50.0% | |
| ATATCCAGGACCCTAGGTCA+GGG | - | chr2_1:11758748-11758767 | None:intergenic | 50.0% | |
| CCTAACACAGTGGCATATCC+AGG | - | chr2_1:11758762-11758781 | None:intergenic | 50.0% | |
| CCTGGATATGCCACTGTGTT+AGG | + | chr2_1:11758759-11758778 | Msa0195080:intron | 50.0% | |
| TGAGTCAATGGTCGAACCAC+TGG | + | chr2_1:11759156-11759175 | Msa0195080:intron | 50.0% | |
| AATAGCTATCAGTGGCCCAG+CGG | + | chr2_1:11759580-11759599 | Msa0195080:intron | 50.0% | |
| CAAGGATGCTATTCAACCGC+TGG | - | chr2_1:11759599-11759618 | None:intergenic | 50.0% | |
| TAGCATCCTTGTGCTGCCAT+AGG | + | chr2_1:11759608-11759627 | Msa0195080:intron | 50.0% | |
| CTGTTACCTATGGCAGCACA+AGG | - | chr2_1:11759617-11759636 | None:intergenic | 50.0% | |
| CTTGTGCTGCCATAGGTAAC+AGG | + | chr2_1:11759615-11759634 | Msa0195080:intron | 50.0% | |
| ATATGGCTCATGGCTCACAC+AGG | - | chr2_1:11759651-11759670 | None:intergenic | 50.0% | |
| GGTACGGAAAACCAGGTCAA+AGG | - | chr2_1:11759739-11759758 | None:intergenic | 50.0% | |
| TCGAACTGGTACGGAAAACC+AGG | - | chr2_1:11759746-11759765 | None:intergenic | 50.0% | |
| TTCCGTACCAGTTCGACAAC+CGG | + | chr2_1:11759750-11759769 | Msa0195080:intron | 50.0% | |
| AACCGGTTGTCGAACTGGTA+CGG | - | chr2_1:11759755-11759774 | None:intergenic | 50.0% | |
| CATCAAACCGGTTGTCGAAC+TGG | - | chr2_1:11759760-11759779 | None:intergenic | 50.0% | |
| !! | CGACAACCGGTTTGATGACA+TGG | + | chr2_1:11759763-11759782 | Msa0195080:intron | 50.0% |
| !! | ACGGTGCCATGTCATCAAAC+CGG | - | chr2_1:11759772-11759791 | None:intergenic | 50.0% |
| ATGGCACCGTGTCAATTGCA+TGG | + | chr2_1:11759782-11759801 | Msa0195080:intron | 50.0% | |
| TGGCACCGTGTCAATTGCAT+GGG | + | chr2_1:11759783-11759802 | Msa0195080:intron | 50.0% | |
| GATCGCCCATGCAATTGACA+CGG | - | chr2_1:11759791-11759810 | None:intergenic | 50.0% | |
| TGTCATACCCGTAAGTGTGG+AGG | + | chr2_1:11760249-11760268 | Msa0195080:CDS | 50.0% | |
| GTGGTGGCATTGCCATCTAC+TGG | + | chr2_1:11755451-11755470 | Msa0195080:CDS | 55.0% | |
| GGTGGCATTGCCATCTACTG+GGG | + | chr2_1:11755453-11755472 | Msa0195080:CDS | 55.0% | |
| TGGGGCCAAAACCTAGGAGA+TGG | + | chr2_1:11755471-11755490 | Msa0195080:CDS | 55.0% | |
| GAGGAGGAAGAGACCCAAGT+TGG | + | chr2_1:11755562-11755581 | Msa0195080:intron | 55.0% | |
| GGCACGTGCAACACAGATTC+GGG | - | chr2_1:11756184-11756203 | None:intergenic | 55.0% | |
| GCACCTAATGCAGCTCCTAG+TGG | + | chr2_1:11757219-11757238 | Msa0195080:CDS | 55.0% | |
| CCACCACTAGGAGCTGCATT+AGG | - | chr2_1:11757225-11757244 | None:intergenic | 55.0% | |
| CCTAATGCAGCTCCTAGTGG+TGG | + | chr2_1:11757222-11757241 | Msa0195080:CDS | 55.0% | |
| GCGGGATGTAGGTCGTTGAT+TGG | + | chr2_1:11758127-11758146 | Msa0195080:intron | 55.0% | |
| TATCCAGGACCCTAGGTCAG+GGG | - | chr2_1:11758747-11758766 | None:intergenic | 55.0% | |
| CATATCCAGGACCCTAGGTC+AGG | - | chr2_1:11758749-11758768 | None:intergenic | 55.0% | |
| AGTGGCATATCCAGGACCCT+AGG | - | chr2_1:11758754-11758773 | None:intergenic | 55.0% | |
| !! | CCATTGACTCAGTGACCCAG+TGG | - | chr2_1:11759147-11759166 | None:intergenic | 55.0% |
| CCACTGGGTCACTGAGTCAA+TGG | + | chr2_1:11759144-11759163 | Msa0195080:intron | 55.0% | |
| TGGTCGAACCACTGGATCAC+TGG | + | chr2_1:11759164-11759183 | Msa0195080:intron | 55.0% | |
| CGGTTCAACCAGTGATCCAG+TGG | - | chr2_1:11759175-11759194 | None:intergenic | 55.0% | |
| GCTCGAACCAGTCATGTGTC+CGG | + | chr2_1:11759820-11759839 | Msa0195080:intron | 55.0% | |
| CCAGTCATGTGTCCGGTTCA+CGG | + | chr2_1:11759827-11759846 | Msa0195080:intron | 55.0% | |
| TCATGTGTCCGGTTCACGGT+CGG | + | chr2_1:11759831-11759850 | Msa0195080:intron | 55.0% | |
| ! | GGAGCTGCATTAGGTGCTGC+TGG | - | chr2_1:11757216-11757235 | None:intergenic | 60.0% |
| ! | ACTCGGACCGGTCATCGACT+CGG | + | chr2_1:11759116-11759135 | Msa0195080:intron | 60.0% |
| !! | ATCGACTCGGCAAGGCCACT+GGG | + | chr2_1:11759129-11759148 | Msa0195080:intron | 60.0% |
| CGCGCGTTTGACCTTTGACC+TGG | + | chr2_1:11759725-11759744 | Msa0195080:intron | 60.0% | |
| CCGTGAACCGGACACATGAC+TGG | - | chr2_1:11759830-11759849 | None:intergenic | 60.0% | |
| !! | GACCGGTCATCGACTCGGCA+AGG | + | chr2_1:11759121-11759140 | Msa0195080:intron | 65.0% |
| GGCCTTGCCGAGTCGATGAC+CGG | - | chr2_1:11759126-11759145 | None:intergenic | 65.0% | |
| !! | CATCGACTCGGCAAGGCCAC+TGG | + | chr2_1:11759128-11759147 | Msa0195080:intron | 65.0% |
| TGTCCGGTTCACGGTCGGAC+CGG | + | chr2_1:11759836-11759855 | Msa0195080:intron | 65.0% | |
| CAACCGGTCCGACCGTGAAC+CGG | - | chr2_1:11759842-11759861 | None:intergenic | 65.0% | |
| CACGGTCGGACCGGTTGAAC+CGG | + | chr2_1:11759845-11759864 | Msa0195080:intron | 65.0% | |
| !! | AAAAACCGGCTCGGACCGGC+CGG | - | chr2_1:11759867-11759886 | None:intergenic | 65.0% |
| GCACCCCTGACCTAGGGTCC+TGG | + | chr2_1:11758741-11758760 | Msa0195080:intron | 70.0% | |
| GTCGGACCGGTTGAACCGGC+CGG | + | chr2_1:11759849-11759868 | Msa0195080:intron | 70.0% | |
| ! | CTCGGACCGGCCGGTTCAAC+CGG | - | chr2_1:11759858-11759877 | None:intergenic | 70.0% |
| TTGAACCGGCCGGTCCGAGC+CGG | + | chr2_1:11759859-11759878 | Msa0195080:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 11755375 | 11760279 | 11755375 | ID=Msa0195080;Name=Msa0195080 |
| chr2_1 | mRNA | 11755375 | 11760279 | 11755375 | ID=Msa0195080-mRNA-1;Parent=Msa0195080;Name=Msa0195080-mRNA-1;_AED=0.08;_eAED=0.10;_QI=0|0|0|1|0.2|0|6|0|409 |
| chr2_1 | exon | 11755375 | 11755579 | 11755375 | ID=Msa0195080-mRNA-1:exon:5169;Parent=Msa0195080-mRNA-1 |
| chr2_1 | exon | 11755595 | 11755804 | 11755595 | ID=Msa0195080-mRNA-1:exon:5170;Parent=Msa0195080-mRNA-1 |
| chr2_1 | exon | 11755829 | 11755889 | 11755829 | ID=Msa0195080-mRNA-1:exon:5171;Parent=Msa0195080-mRNA-1 |
| chr2_1 | exon | 11756996 | 11757243 | 11756996 | ID=Msa0195080-mRNA-1:exon:5172;Parent=Msa0195080-mRNA-1 |
| chr2_1 | exon | 11757259 | 11757460 | 11757259 | ID=Msa0195080-mRNA-1:exon:5173;Parent=Msa0195080-mRNA-1 |
| chr2_1 | exon | 11759976 | 11760279 | 11759976 | ID=Msa0195080-mRNA-1:exon:5174;Parent=Msa0195080-mRNA-1 |
| chr2_1 | CDS | 11755375 | 11755579 | 11755375 | ID=Msa0195080-mRNA-1:cds;Parent=Msa0195080-mRNA-1 |
| chr2_1 | CDS | 11755595 | 11755804 | 11755595 | ID=Msa0195080-mRNA-1:cds;Parent=Msa0195080-mRNA-1 |
| chr2_1 | CDS | 11755829 | 11755889 | 11755829 | ID=Msa0195080-mRNA-1:cds;Parent=Msa0195080-mRNA-1 |
| chr2_1 | CDS | 11756996 | 11757243 | 11756996 | ID=Msa0195080-mRNA-1:cds;Parent=Msa0195080-mRNA-1 |
| chr2_1 | CDS | 11757259 | 11757460 | 11757259 | ID=Msa0195080-mRNA-1:cds;Parent=Msa0195080-mRNA-1 |
| chr2_1 | CDS | 11759976 | 11760279 | 11759976 | ID=Msa0195080-mRNA-1:cds;Parent=Msa0195080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
