Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0202800 | XP_013463481.1 | 84.337 | 332 | 46 | 4 | 1 | 329 | 1 | 329 | 0.0 | 552 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0202800 | sp|P36910|CHIE_BETVU | 49.836 | 305 | 136 | 8 | 1 | 300 | 1 | 293 | 5.30e-91 | 276 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0202800 | A0A072V7A7 | 84.337 | 332 | 46 | 4 | 1 | 329 | 1 | 329 | 0.0 | 552 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026450 | Msa0202800 | 0.810429 | 1.157859e-50 | -8.615850e-47 |
| Msa0028620 | Msa0202800 | 0.813023 | 3.157414e-51 | -8.615850e-47 |
| Msa0029850 | Msa0202800 | 0.803377 | 3.589180e-49 | -8.615850e-47 |
| Msa0032080 | Msa0202800 | 0.805483 | 1.306202e-49 | -8.615850e-47 |
| Msa0046560 | Msa0202800 | 0.815005 | 1.153789e-51 | -8.615850e-47 |
| Msa0053860 | Msa0202800 | 0.820757 | 5.794671e-53 | -8.615850e-47 |
| Msa0072720 | Msa0202800 | 0.806344 | 8.608229e-50 | -8.615850e-47 |
| Msa0079070 | Msa0202800 | 0.803707 | 3.066351e-49 | -8.615850e-47 |
| Msa0079130 | Msa0202800 | 0.803389 | 3.568072e-49 | -8.615850e-47 |
| Msa0104670 | Msa0202800 | 0.811439 | 6.998705e-51 | -8.615850e-47 |
| Msa0124320 | Msa0202800 | 0.821398 | 4.124743e-53 | -8.615850e-47 |
| Msa0125050 | Msa0202800 | 0.802033 | 6.797591e-49 | -8.615850e-47 |
| Msa0126790 | Msa0202800 | 0.814610 | 1.411692e-51 | -8.615850e-47 |
| Msa0131770 | Msa0202800 | 0.810547 | 1.092067e-50 | -8.615850e-47 |
| Msa0145260 | Msa0202800 | 0.806959 | 6.384216e-50 | -8.615850e-47 |
| Msa0160960 | Msa0202800 | 0.815980 | 6.999153e-52 | -8.615850e-47 |
| Msa0169820 | Msa0202800 | 0.805756 | 1.144541e-49 | -8.615850e-47 |
| Msa0171870 | Msa0202800 | 0.814403 | 1.567945e-51 | -8.615850e-47 |
| Msa0172080 | Msa0202800 | 0.802713 | 4.922707e-49 | -8.615850e-47 |
| Msa0173800 | Msa0202800 | 0.807209 | 5.653573e-50 | -8.615850e-47 |
| Msa0186950 | Msa0202800 | 0.810576 | 1.076257e-50 | -8.615850e-47 |
| Msa0187830 | Msa0202800 | 0.804858 | 1.765475e-49 | -8.615850e-47 |
| Msa0195080 | Msa0202800 | 0.862822 | 3.860268e-64 | -8.615850e-47 |
| Msa0195100 | Msa0202800 | 0.952469 | 2.263837e-110 | -8.615850e-47 |
| Msa0195110 | Msa0202800 | 0.868918 | 4.568264e-66 | -8.615850e-47 |
| Msa0202800 | Msa0204840 | 0.802352 | 5.843814e-49 | -8.615850e-47 |
| Msa0202800 | Msa0218370 | 0.804418 | 2.180747e-49 | -8.615850e-47 |
| Msa0202800 | Msa0223340 | 0.814035 | 1.890799e-51 | -8.615850e-47 |
| Msa0202800 | Msa0230320 | 0.960877 | 4.676595e-119 | -8.615850e-47 |
| Msa0202800 | Msa0234090 | 0.818216 | 2.201153e-52 | -8.615850e-47 |
| Msa0202800 | Msa0236420 | 0.805357 | 1.388374e-49 | -8.615850e-47 |
| Msa0202800 | Msa0241140 | 0.815288 | 9.981382e-52 | -8.615850e-47 |
| Msa0202800 | Msa0245900 | 0.857578 | 1.483449e-62 | -8.615850e-47 |
| Msa0202800 | Msa0259210 | 0.814781 | 1.293431e-51 | -8.615850e-47 |
| Msa0202800 | Msa0270960 | 0.803734 | 3.026344e-49 | -8.615850e-47 |
| Msa0202800 | Msa0271770 | 0.814221 | 1.720500e-51 | -8.615850e-47 |
| Msa0202800 | Msa0284480 | 0.847043 | 1.483760e-59 | -8.615850e-47 |
| Msa0202800 | Msa0287870 | 0.824361 | 8.414255e-54 | -8.615850e-47 |
| Msa0202800 | Msa0290870 | 0.820757 | 5.793393e-53 | -8.615850e-47 |
| Msa0202800 | Msa0307540 | 0.803580 | 3.257298e-49 | -8.615850e-47 |
| Msa0202800 | Msa0308630 | 0.961545 | 7.934600e-120 | -8.615850e-47 |
| Msa0202800 | Msa0309980 | 0.804175 | 2.450292e-49 | -8.615850e-47 |
| Msa0202800 | Msa0317970 | 0.804490 | 2.107234e-49 | -8.615850e-47 |
| Msa0202800 | Msa0322530 | 0.850568 | 1.561358e-60 | -8.615850e-47 |
| Msa0202800 | Msa0322540 | 0.861774 | 8.100255e-64 | -8.615850e-47 |
| Msa0202800 | Msa0336310 | 0.812931 | 3.307280e-51 | -8.615850e-47 |
| Msa0202800 | Msa0336320 | 0.829189 | 5.917237e-55 | -8.615850e-47 |
| Msa0202800 | Msa0343850 | 0.819589 | 1.072634e-52 | -8.615850e-47 |
| Msa0202800 | Msa0363790 | 0.818891 | 1.547406e-52 | -8.615850e-47 |
| Msa0202800 | Msa0366210 | 0.800565 | 1.357793e-48 | -8.615850e-47 |
| Msa0202800 | Msa0367870 | 0.813352 | 2.672950e-51 | -8.615850e-47 |
| Msa0202800 | Msa0376910 | 0.806124 | 9.580526e-50 | -8.615850e-47 |
| Msa0202800 | Msa0381610 | -0.811310 | 7.465286e-51 | -8.615850e-47 |
| Msa0202800 | Msa0382370 | 0.818760 | 1.656726e-52 | -8.615850e-47 |
| Msa0202800 | Msa0389770 | 0.980028 | 2.775212e-149 | -8.615850e-47 |
| Msa0202800 | Msa0393430 | 0.816794 | 4.602060e-52 | -8.615850e-47 |
| Msa0202800 | Msa0394470 | 0.800706 | 1.270649e-48 | -8.615850e-47 |
| Msa0202800 | Msa0395980 | 0.805990 | 1.022215e-49 | -8.615850e-47 |
| Msa0202800 | Msa0414140 | 0.801237 | 9.897838e-49 | -8.615850e-47 |
| Msa0202800 | Msa0417330 | 0.803485 | 3.408030e-49 | -8.615850e-47 |
| Msa0202800 | Msa0432160 | 0.838978 | 2.085722e-57 | -8.615850e-47 |
| Msa0202800 | Msa0432670 | 0.823544 | 1.308036e-53 | -8.615850e-47 |
| Msa0202800 | Msa0455760 | 0.803003 | 4.288726e-49 | -8.615850e-47 |
| Msa0202800 | Msa0460590 | 0.821674 | 3.560903e-53 | -8.615850e-47 |
| Msa0202800 | Msa0471900 | 0.819146 | 1.353420e-52 | -8.615850e-47 |
| Msa0202800 | Msa0476680 | 0.840886 | 6.636334e-58 | -8.615850e-47 |
| Msa0202800 | Msa0482940 | 0.805049 | 1.610414e-49 | -8.615850e-47 |
| Msa0202800 | Msa0486690 | 0.802283 | 6.037275e-49 | -8.615850e-47 |
| Msa0202800 | Msa0491000 | 0.809411 | 1.917720e-50 | -8.615850e-47 |
| Msa0202800 | Msa0521010 | 0.840698 | 7.434844e-58 | -8.615850e-47 |
| Msa0202800 | Msa0526070 | -0.806633 | 7.482659e-50 | -8.615850e-47 |
| Msa0202800 | Msa0542290 | 0.805785 | 1.129032e-49 | -8.615850e-47 |
| Msa0202800 | Msa0545850 | 0.809039 | 2.304240e-50 | -8.615850e-47 |
| Msa0202800 | Msa0559500 | 0.807725 | 4.392170e-50 | -8.615850e-47 |
| Msa0202800 | Msa0566350 | 0.801377 | 9.268921e-49 | -8.615850e-47 |
| Msa0202800 | Msa0566750 | 0.802654 | 5.062837e-49 | -8.615850e-47 |
| Msa0202800 | Msa0613110 | 0.812259 | 4.639097e-51 | -8.615850e-47 |
| Msa0202800 | Msa0622170 | -0.808390 | 3.170847e-50 | -8.615850e-47 |
| Msa0202800 | Msa0623070 | 0.800648 | 1.305713e-48 | -8.615850e-47 |
| Msa0202800 | Msa0636500 | 0.832514 | 9.052596e-56 | -8.615850e-47 |
| Msa0202800 | Msa0653660 | 0.800674 | 1.290158e-48 | -8.615850e-47 |
| Msa0202800 | Msa0667740 | 0.822573 | 2.203385e-53 | -8.615850e-47 |
| Msa0202800 | Msa0676180 | 0.802151 | 6.426625e-49 | -8.615850e-47 |
| Msa0202800 | Msa0680660 | 0.812756 | 3.612211e-51 | -8.615850e-47 |
| Msa0202800 | Msa0696850 | 0.803321 | 3.686912e-49 | -8.615850e-47 |
| Msa0202800 | Msa0703780 | 0.807069 | 6.052590e-50 | -8.615850e-47 |
| Msa0202800 | Msa0709270 | 0.834248 | 3.345823e-56 | -8.615850e-47 |
| Msa0202800 | Msa0711150 | 0.802594 | 5.209754e-49 | -8.615850e-47 |
| Msa0202800 | Msa0721280 | 0.812523 | 4.061248e-51 | -8.615850e-47 |
| Msa0202800 | Msa0738030 | 0.802536 | 5.355164e-49 | -8.615850e-47 |
| Msa0202800 | Msa0743870 | 0.806688 | 7.283195e-50 | -8.615850e-47 |
| Msa0202800 | Msa0743930 | 0.802217 | 6.230018e-49 | -8.615850e-47 |
| Msa0202800 | Msa0753370 | 0.800846 | 1.189933e-48 | -8.615850e-47 |
| Msa0202800 | Msa0756380 | 0.827215 | 1.769565e-54 | -8.615850e-47 |
| Msa0202800 | Msa0759490 | 0.800333 | 1.514153e-48 | -8.615850e-47 |
| Msa0202800 | Msa0763890 | 0.813976 | 1.948387e-51 | -8.615850e-47 |
| Msa0202800 | Msa0763920 | 0.817536 | 3.134345e-52 | -8.615850e-47 |
| Msa0202800 | Msa0783690 | 0.802964 | 4.368480e-49 | -8.615850e-47 |
| Msa0202800 | Msa0784480 | 0.811978 | 5.340652e-51 | -8.615850e-47 |
| Msa0202800 | Msa0797770 | 0.821188 | 4.611910e-53 | -8.615850e-47 |
| Msa0202800 | Msa0810270 | 0.810711 | 1.006452e-50 | -8.615850e-47 |
| Msa0202800 | Msa0813000 | 0.803726 | 3.038047e-49 | -8.615850e-47 |
| Msa0202800 | Msa0817460 | 0.828771 | 7.470316e-55 | -8.615850e-47 |
| Msa0202800 | Msa0818060 | 0.804700 | 1.905172e-49 | -8.615850e-47 |
| Msa0202800 | Msa0818890 | 0.809193 | 2.135797e-50 | -8.615850e-47 |
| Msa0202800 | Msa0831130 | 0.838588 | 2.630418e-57 | -8.615850e-47 |
| Msa0202800 | Msa0831850 | 0.800463 | 1.424478e-48 | -8.615850e-47 |
| Msa0202800 | Msa0832340 | 0.821223 | 4.525915e-53 | -8.615850e-47 |
| Msa0202800 | Msa0832600 | 0.819503 | 1.122149e-52 | -8.615850e-47 |
| Msa0202800 | Msa0835230 | 0.824618 | 7.320702e-54 | -8.615850e-47 |
| Msa0202800 | Msa0844490 | 0.824548 | 7.603783e-54 | -8.615850e-47 |
| Msa0202800 | Msa0853520 | 0.829265 | 5.669000e-55 | -8.615850e-47 |
| Msa0202800 | Msa0855870 | 0.829075 | 6.305256e-55 | -8.615850e-47 |
| Msa0202800 | Msa0859070 | 0.822754 | 2.000165e-53 | -8.615850e-47 |
| Msa0202800 | Msa0870380 | 0.824338 | 8.518825e-54 | -8.615850e-47 |
| Msa0202800 | Msa0894710 | 0.826179 | 3.126121e-54 | -8.615850e-47 |
| Msa0202800 | Msa0899970 | 0.816927 | 4.296762e-52 | -8.615850e-47 |
| Msa0202800 | Msa0902830 | 0.803823 | 2.899847e-49 | -8.615850e-47 |
| Msa0202800 | Msa0921420 | 0.823182 | 1.589382e-53 | -8.615850e-47 |
| Msa0202800 | Msa0933760 | 0.801815 | 7.536206e-49 | -8.615850e-47 |
| Msa0202800 | Msa0934140 | 0.804396 | 2.204099e-49 | -8.615850e-47 |
| Msa0202800 | Msa0936060 | 0.800725 | 1.259572e-48 | -8.615850e-47 |
| Msa0202800 | Msa0936390 | 0.803411 | 3.530849e-49 | -8.615850e-47 |
| Msa0202800 | Msa0960390 | 0.823361 | 1.443665e-53 | -8.615850e-47 |
| Msa0202800 | Msa0965080 | 0.822305 | 2.544008e-53 | -8.615850e-47 |
| Msa0202800 | Msa0965290 | 0.823317 | 1.478215e-53 | -8.615850e-47 |
| Msa0202800 | Msa0972960 | 0.823172 | 1.597991e-53 | -8.615850e-47 |
| Msa0202800 | Msa0986510 | 0.820578 | 6.369218e-53 | -8.615850e-47 |
| Msa0202800 | Msa0994910 | 0.816189 | 6.286297e-52 | -8.615850e-47 |
| Msa0202800 | Msa0999680 | 0.823213 | 1.563365e-53 | -8.615850e-47 |
| Msa0202800 | Msa1002960 | 0.804530 | 2.067306e-49 | -8.615850e-47 |
| Msa0202800 | Msa1006010 | -0.823475 | 1.357722e-53 | -8.615850e-47 |
| Msa0202800 | Msa1019000 | 0.803810 | 2.918963e-49 | -8.615850e-47 |
| Msa0202800 | Msa1019150 | 0.815600 | 8.509033e-52 | -8.615850e-47 |
| Msa0202800 | Msa1026480 | 0.807321 | 5.351202e-50 | -8.615850e-47 |
| Msa0202800 | Msa1034500 | 0.817894 | 2.601666e-52 | -8.615850e-47 |
| Msa0202800 | Msa1036610 | 0.817260 | 3.615367e-52 | -8.615850e-47 |
| Msa0202800 | Msa1039710 | -0.810796 | 9.646892e-51 | -8.615850e-47 |
| Msa0202800 | Msa1040980 | 0.826665 | 2.395204e-54 | -8.615850e-47 |
| Msa0202800 | Msa1043760 | 0.826857 | 2.155047e-54 | -8.615850e-47 |
| Msa0202800 | Msa1063420 | 0.812974 | 3.235371e-51 | -8.615850e-47 |
| Msa0202800 | Msa1079430 | 0.813958 | 1.966137e-51 | -8.615850e-47 |
| Msa0202800 | Msa1100130 | -0.822273 | 2.587334e-53 | -8.615850e-47 |
| Msa0202800 | Msa1121490 | 0.801182 | 1.015940e-48 | -8.615850e-47 |
| Msa0202800 | Msa1122150 | 0.802697 | 4.961423e-49 | -8.615850e-47 |
| Msa0202800 | Msa1127380 | 0.821418 | 4.081031e-53 | -8.615850e-47 |
| Msa0202800 | Msa1132470 | 0.804120 | 2.515668e-49 | -8.615850e-47 |
| Msa0202800 | Msa1147740 | 0.817287 | 3.565677e-52 | -8.615850e-47 |
| Msa0202800 | Msa1177560 | 0.837861 | 4.047621e-57 | -8.615850e-47 |
| Msa0202800 | Msa1188180 | 0.808650 | 2.790918e-50 | -8.615850e-47 |
| Msa0202800 | Msa1212050 | 0.814517 | 1.479772e-51 | -8.615850e-47 |
| Msa0202800 | Msa1212130 | 0.820989 | 5.124700e-53 | -8.615850e-47 |
| Msa0202800 | Msa1226460 | 0.833122 | 6.392420e-56 | -8.615850e-47 |
| Msa0202800 | Msa1242300 | 0.808907 | 2.459231e-50 | -8.615850e-47 |
| Msa0202800 | Msa1243870 | 0.822063 | 2.894734e-53 | -8.615850e-47 |
| Msa0202800 | Msa1246360 | 0.800014 | 1.758207e-48 | -8.615850e-47 |
| Msa0202800 | Msa1259860 | 0.827010 | 1.981257e-54 | -8.615850e-47 |
| Msa0202800 | Msa1270660 | 0.808837 | 2.545238e-50 | -8.615850e-47 |
| Msa0202800 | Msa1270730 | 0.812079 | 5.076600e-51 | -8.615850e-47 |
| Msa0202800 | Msa1271130 | 0.827631 | 1.406186e-54 | -8.615850e-47 |
| Msa0202800 | Msa1284900 | 0.816554 | 5.209834e-52 | -8.615850e-47 |
| Msa0202800 | Msa1285550 | 0.812504 | 4.101264e-51 | -8.615850e-47 |
| Msa0202800 | Msa1286800 | 0.810197 | 1.299085e-50 | -8.615850e-47 |
| Msa0202800 | Msa1304890 | -0.801054 | 1.079173e-48 | -8.615850e-47 |
| Msa0202800 | Msa1305810 | 0.802616 | 5.156195e-49 | -8.615850e-47 |
| Msa0202800 | Msa1315420 | 0.852293 | 5.076284e-61 | -8.615850e-47 |
| Msa0202800 | Msa1330630 | 0.801614 | 8.286329e-49 | -8.615850e-47 |
| Msa0202800 | Msa1332050 | 0.801506 | 8.720044e-49 | -8.615850e-47 |
| Msa0202800 | Msa1335230 | 0.825103 | 5.626249e-54 | -8.615850e-47 |
| Msa0202800 | Msa1351740 | 0.801008 | 1.102522e-48 | -8.615850e-47 |
| Msa0202800 | Msa1355450 | 0.805356 | 1.389002e-49 | -8.615850e-47 |
| Msa0202800 | Msa1357890 | 0.812279 | 4.593423e-51 | -8.615850e-47 |
| Msa0202800 | Msa1358070 | 0.827034 | 1.955306e-54 | -8.615850e-47 |
| Msa0202800 | Msa1369920 | -0.817684 | 2.901981e-52 | -8.615850e-47 |
| Msa0202800 | Msa1370590 | 0.800139 | 1.658265e-48 | -8.615850e-47 |
| Msa0202800 | Msa1378410 | 0.803499 | 3.385753e-49 | -8.615850e-47 |
| Msa0202800 | Msa1384100 | 0.802224 | 6.208702e-49 | -8.615850e-47 |
| Msa0202800 | Msa1386890 | 0.824940 | 6.147591e-54 | -8.615850e-47 |
| Msa0202800 | Msa1390690 | 0.809340 | 1.986390e-50 | -8.615850e-47 |
| Msa0202800 | Msa1390700 | 0.829849 | 4.088419e-55 | -8.615850e-47 |
| Msa0202800 | Msa1392210 | 0.800022 | 1.751438e-48 | -8.615850e-47 |
| Msa0202800 | Msa1392900 | 0.804509 | 2.087552e-49 | -8.615850e-47 |
| Msa0202800 | Msa1392910 | 0.824492 | 7.839368e-54 | -8.615850e-47 |
| Msa0202800 | Msa1394310 | 0.800987 | 1.113598e-48 | -8.615850e-47 |
| Msa0202800 | Msa1397120 | 0.805726 | 1.161648e-49 | -8.615850e-47 |
| Msa0202800 | Msa1397740 | 0.801268 | 9.755528e-49 | -8.615850e-47 |
| Msa0202800 | Msa1398090 | 0.821786 | 3.355185e-53 | -8.615850e-47 |
| Msa0202800 | Msa1400930 | 0.803913 | 2.778577e-49 | -8.615850e-47 |
| Msa0202800 | Msa1401460 | 0.807869 | 4.093268e-50 | -8.615850e-47 |
| Msa0202800 | Msa1403890 | 0.802086 | 6.629427e-49 | -8.615850e-47 |
| Msa0202800 | Msa1410630 | 0.809709 | 1.655170e-50 | -8.615850e-47 |
| Msa0202800 | Msa1411050 | 0.808228 | 3.432798e-50 | -8.615850e-47 |
| Msa0202800 | Msa1419690 | 0.811745 | 6.003536e-51 | -8.615850e-47 |
| Msa0202800 | Msa1423780 | 0.945833 | 1.452817e-104 | -8.615850e-47 |
| Msa0202800 | Msa1435270 | 0.805008 | 1.642699e-49 | -8.615850e-47 |
| Msa0202800 | Msa1437730 | 0.825703 | 4.057296e-54 | -8.615850e-47 |
| Msa0202800 | Msa1442920 | 0.824082 | 9.784543e-54 | -8.615850e-47 |
| Msa0202800 | Msa1444120 | 0.807619 | 4.625970e-50 | -8.615850e-47 |
| Msa0202800 | Msa1446080 | 0.802587 | 5.227328e-49 | -8.615850e-47 |
| Msa0202800 | Msa1448560 | 0.811141 | 8.122721e-51 | -8.615850e-47 |
| Msa0202800 | Msa1449260 | 0.804028 | 2.628836e-49 | -8.615850e-47 |
| Msa0202800 | Msa1456230 | 0.844825 | 5.948121e-59 | -8.615850e-47 |
| Msa0202800 | Msa1458340 | 0.822115 | 2.814352e-53 | -8.615850e-47 |
| Msa0202800 | Msa1458680 | 0.825525 | 4.470572e-54 | -8.615850e-47 |
| Msa0202800 | Msa1465570 | 0.812465 | 4.182958e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0202800 | MtrunA17_Chr2g0300141 | 84.337 | 332 | 46 | 4 | 1 | 329 | 1 | 329 | 0.0 | 552 |
| Msa0202800 | MtrunA17_Chr2g0300081 | 82.036 | 334 | 52 | 5 | 1 | 329 | 1 | 331 | 0.0 | 535 |
| Msa0202800 | MtrunA17_Chr2g0300101 | 81.325 | 332 | 55 | 6 | 1 | 329 | 1 | 328 | 0.0 | 513 |
| Msa0202800 | MtrunA17_Chr2g0300051 | 82.121 | 330 | 53 | 5 | 1 | 329 | 1 | 325 | 0.0 | 502 |
| Msa0202800 | MtrunA17_Chr2g0300181 | 57.738 | 336 | 131 | 7 | 1 | 329 | 1 | 332 | 7.87e-130 | 374 |
| Msa0202800 | MtrunA17_Chr5g0418461 | 52.843 | 299 | 125 | 8 | 10 | 300 | 4 | 294 | 3.78e-97 | 289 |
| Msa0202800 | MtrunA17_Chr1g0202241 | 51.803 | 305 | 133 | 8 | 1 | 300 | 1 | 296 | 4.55e-97 | 289 |
| Msa0202800 | MtrunA17_Chr7g0240891 | 49.013 | 304 | 140 | 8 | 5 | 300 | 2 | 298 | 4.98e-94 | 281 |
| Msa0202800 | MtrunA17_Chr1g0202231 | 49.315 | 292 | 137 | 6 | 11 | 297 | 10 | 295 | 3.69e-91 | 275 |
| Msa0202800 | MtrunA17_Chr1g0202261 | 52.030 | 271 | 119 | 7 | 23 | 287 | 20 | 285 | 4.83e-87 | 263 |
| Msa0202800 | MtrunA17_Chr2g0300171 | 82.993 | 147 | 24 | 1 | 183 | 329 | 1 | 146 | 1.72e-84 | 251 |
| Msa0202800 | MtrunA17_Chr7g0275231 | 46.104 | 308 | 149 | 9 | 2 | 300 | 4 | 303 | 1.05e-81 | 250 |
| Msa0202800 | MtrunA17_Chr8g0361941 | 46.667 | 300 | 146 | 9 | 8 | 300 | 6 | 298 | 3.99e-80 | 246 |
| Msa0202800 | MtrunA17_Chr7g0274861 | 44.746 | 295 | 130 | 7 | 11 | 300 | 9 | 275 | 1.27e-79 | 244 |
| Msa0202800 | MtrunA17_Chr1g0202281 | 47.388 | 268 | 128 | 7 | 24 | 286 | 38 | 297 | 3.03e-78 | 241 |
| Msa0202800 | MtrunA17_Chr2g0331781 | 46.075 | 293 | 140 | 8 | 7 | 286 | 13 | 300 | 1.84e-77 | 241 |
| Msa0202800 | MtrunA17_Chr2g0300161 | 69.540 | 174 | 49 | 2 | 1 | 171 | 1 | 173 | 1.95e-73 | 224 |
| Msa0202800 | MtrunA17_Chr2g0300151 | 53.548 | 155 | 58 | 4 | 1 | 144 | 1 | 152 | 2.97e-45 | 151 |
| Msa0202800 | MtrunA17_Chr6g0459141 | 43.636 | 110 | 56 | 2 | 24 | 129 | 23 | 130 | 1.46e-23 | 97.1 |
| Msa0202800 | MtrunA17_Chr6g0459141 | 45.238 | 84 | 43 | 3 | 218 | 300 | 150 | 231 | 1.69e-14 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0202800 | AT5G24090.1 | 46.205 | 303 | 153 | 7 | 3 | 300 | 5 | 302 | 3.25e-89 | 269 |
Find 69 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGCTTTCCTCAATGTCTT+TGG | 0.217357 | 2_1:-25415472 | Msa0202800:CDS |
| ATAAAACACTGTCAAGAAAA+AGG | 0.225882 | 2_1:-25415370 | Msa0202800:CDS |
| CCCATGAAAACGGTATTATT+TGG | 0.251275 | 2_1:+25412890 | None:intergenic |
| AACTTTCTTAGTGGTCAATT+TGG | 0.254606 | 2_1:-25415262 | Msa0202800:CDS |
| ATAGTTGGAAGTTGGTTTAA+TGG | 0.284816 | 2_1:+25412790 | None:intergenic |
| TTACTTTCCCTCAGAGCATT+AGG | 0.302991 | 2_1:-25415337 | Msa0202800:CDS |
| AAGGAGGTACAAATCTTTAC+TGG | 0.304361 | 2_1:-25415195 | Msa0202800:CDS |
| ATTAAACCAACTTCCAACTA+TGG | 0.306183 | 2_1:-25412788 | Msa0202800:CDS |
| GTTAAAATCAACACCATCTA+AGG | 0.310593 | 2_1:+25415222 | None:intergenic |
| ACCAGATGATCTCATTTCTA+AGG | 0.326123 | 2_1:-25412822 | Msa0202800:CDS |
| ATGGTGGCATTGCCGTCTAC+TGG | 0.329897 | 2_1:-25415561 | Msa0202800:CDS |
| CTTGGAAGTGTTACCTTAGA+TGG | 0.333989 | 2_1:-25415235 | Msa0202800:CDS |
| CTCTATACTAACTTTCTTAG+TGG | 0.345832 | 2_1:-25415271 | Msa0202800:CDS |
| AGCACAAAATGGATACAAAA+AGG | 0.354708 | 2_1:-25415648 | None:intergenic |
| TAATTTCGAGATTGTACTCT+TGG | 0.374143 | 2_1:-25415491 | Msa0202800:CDS |
| CTTGACAAAGCTATCAAAAC+TGG | 0.380969 | 2_1:-25413031 | Msa0202800:CDS |
| CTATGGAGGAATTATGCTTT+GGG | 0.391332 | 2_1:-25412771 | Msa0202800:CDS |
| GTAATCTGGCATATAACATT+GGG | 0.392231 | 2_1:+25413057 | None:intergenic |
| ACTATGGAGGAATTATGCTT+TGG | 0.402308 | 2_1:-25412772 | Msa0202800:CDS |
| TGGTGGCATTGCCGTCTACT+GGG | 0.405455 | 2_1:-25415560 | Msa0202800:CDS |
| GCTTTCCTCAATGTCTTTGG+AGG | 0.413044 | 2_1:-25415469 | Msa0202800:CDS |
| TGATTTGCAAAGTTCAAACT+TGG | 0.417925 | 2_1:+25415436 | None:intergenic |
| TAGCTTCTTCTGGTGAGCTA+AGG | 0.426254 | 2_1:+25415311 | None:intergenic |
| TGATTACAGCTATCAGATAA+AGG | 0.427044 | 2_1:-25412723 | Msa0202800:CDS |
| CTACATTGCTCTTAAAATCA+TGG | 0.429928 | 2_1:-25412937 | Msa0202800:CDS |
| ACCTTAGAAATGAGATCATC+TGG | 0.432094 | 2_1:+25412821 | None:intergenic |
| TTCCTCAATGTCTTTGGAGG+AGG | 0.446588 | 2_1:-25415466 | Msa0202800:CDS |
| AGCTTCTTCTGGTGAGCTAA+GGG | 0.448193 | 2_1:+25415312 | None:intergenic |
| TGGGATAGATTTCATGATGT+TGG | 0.451538 | 2_1:-25412752 | Msa0202800:CDS |
| ACAATCTAAGACAACAAAAC+AGG | 0.458920 | 2_1:-25415150 | Msa0202800:intron |
| AAGCATAATTCCTCCATAGT+TGG | 0.460777 | 2_1:+25412775 | None:intergenic |
| TCTTAAAATCATGGAATGCT+TGG | 0.464778 | 2_1:-25412928 | Msa0202800:CDS |
| CAAGTTTCAGAGGCAATAGC+TGG | 0.480314 | 2_1:-25412665 | Msa0202800:CDS |
| ATTCCTCCATAGTTGGAAGT+TGG | 0.484513 | 2_1:+25412782 | None:intergenic |
| TTTGTTGTCTTAGATTGTCA+AGG | 0.485852 | 2_1:+25415155 | None:intergenic |
| GCTTTGTCAAGGTAGTAATC+TGG | 0.487955 | 2_1:+25413043 | None:intergenic |
| TTTACTGGGATGACCTTGCT+AGG | 0.501225 | 2_1:-25415180 | Msa0202800:CDS |
| TTGGAAGTTGGTTTAATGGA+AGG | 0.522478 | 2_1:+25412794 | None:intergenic |
| AGTAATCTGGCATATAACAT+TGG | 0.524590 | 2_1:+25413056 | None:intergenic |
| GGAGCTGCATCAGGTGATGC+TGG | 0.526731 | 2_1:+25412863 | None:intergenic |
| CACTAAGAAAGTTAGTATAG+AGG | 0.529347 | 2_1:+25415272 | None:intergenic |
| TGCTGGTAGTCCCATGAAAA+CGG | 0.529775 | 2_1:+25412880 | None:intergenic |
| CCACCACTAGGAGCTGCATC+AGG | 0.548590 | 2_1:+25412854 | None:intergenic |
| GATTTGCAAAGTTCAAACTT+GGG | 0.564533 | 2_1:+25415437 | None:intergenic |
| AGTGGTCAATTTGGTCCACT+TGG | 0.566066 | 2_1:-25415253 | Msa0202800:CDS |
| AAGGGCTCCTAATGCTCTGA+GGG | 0.572834 | 2_1:+25415330 | None:intergenic |
| TATGATTTAATTCGTAAACA+TGG | 0.576145 | 2_1:+25412619 | None:intergenic |
| TTGAACTTTGCAAATCATTG+TGG | 0.576615 | 2_1:-25415430 | Msa0202800:CDS |
| TTCCTCCTCCAAAGACATTG+AGG | 0.584718 | 2_1:+25415464 | None:intergenic |
| TGATGATGCTTTGATAGTGA+AGG | 0.585896 | 2_1:+25415588 | None:intergenic |
| TTACTGGGATGACCTTGCTA+GGG | 0.587273 | 2_1:-25415179 | Msa0202800:CDS |
| AGGAGGTACAAATCTTTACT+GGG | 0.587554 | 2_1:-25415194 | Msa0202800:CDS |
| TGGGGCCAAAACGTAAAAGA+AGG | 0.591748 | 2_1:-25415541 | Msa0202800:CDS |
| GATTGTCAAGGTCCCTAGCA+AGG | 0.595500 | 2_1:+25415167 | None:intergenic |
| ATATTGTCAAGACTAACAAA+AGG | 0.600315 | 2_1:+25415614 | None:intergenic |
| ATCAAAGCATCATCAAGTGA+TGG | 0.610130 | 2_1:-25415580 | Msa0202800:CDS |
| TTGACATCAACATGTGACAC+TGG | 0.615620 | 2_1:-25415514 | Msa0202800:CDS |
| GATGATGCTTTGATAGTGAA+GGG | 0.636457 | 2_1:+25415589 | None:intergenic |
| AAACCAACTTCCAACTATGG+AGG | 0.642148 | 2_1:-25412785 | Msa0202800:CDS |
| AAAGCATCATCAAGTGATGG+TGG | 0.646449 | 2_1:-25415577 | Msa0202800:CDS |
| TCACCTGATGCAGCTCCTAG+TGG | 0.649095 | 2_1:-25412857 | Msa0202800:CDS |
| TAAGGGCTCCTAATGCTCTG+AGG | 0.652053 | 2_1:+25415329 | None:intergenic |
| CCTGATGCAGCTCCTAGTGG+TGG | 0.652514 | 2_1:-25412854 | Msa0202800:CDS |
| GGTGGCATTGCCGTCTACTG+GGG | 0.654303 | 2_1:-25415559 | Msa0202800:CDS |
| AGTGTCACATGTTGATGTCA+AGG | 0.656681 | 2_1:+25415516 | None:intergenic |
| TAATCTGGCATATAACATTG+GGG | 0.697221 | 2_1:+25413058 | None:intergenic |
| GGTGGTATATAACCACCACT+AGG | 0.701616 | 2_1:+25412842 | None:intergenic |
| TCTAAGGTAACACTTCCAAG+TGG | 0.714737 | 2_1:+25415238 | None:intergenic |
| TTAGAAATGAGATCATCTGG+TGG | 0.728954 | 2_1:+25412824 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTCTTTGAAAAAATA+TGG | + | chr2_1:25413596-25413615 | None:intergenic | 10.0% |
| !! | AATATGAGAAAATATAATAT+AGG | - | chr2_1:25413703-25413722 | Msa0202800:intron | 10.0% |
| !! | TAATAAATATTTACCATTTA+TGG | - | chr2_1:25414818-25414837 | Msa0202800:intron | 10.0% |
| !!! | TTTTCAAAGAAAAATATGTA+TGG | - | chr2_1:25413600-25413619 | Msa0202800:intron | 15.0% |
| !!! | TATCCATTCTAAAATTATTA+TGG | + | chr2_1:25414027-25414046 | None:intergenic | 15.0% |
| !! | TACTTATGTTACAAATATTT+GGG | + | chr2_1:25414271-25414290 | None:intergenic | 15.0% |
| !! | ATACTTATGTTACAAATATT+TGG | + | chr2_1:25414272-25414291 | None:intergenic | 15.0% |
| !!! | TTAATTTATTGATTTATGAC+AGG | + | chr2_1:25414941-25414960 | None:intergenic | 15.0% |
| !!! | GAAATGATGTTTTTTTTTAT+GGG | + | chr2_1:25415023-25415042 | None:intergenic | 15.0% |
| !!! | TGAAATGATGTTTTTTTTTA+TGG | + | chr2_1:25415024-25415043 | None:intergenic | 15.0% |
| !!! | TTTTTTTTATCATATTGACA+TGG | + | chr2_1:25415300-25415319 | None:intergenic | 15.0% |
| !!! | TAGTACTTTTTTTTTGAATC+GGG | + | chr2_1:25413191-25413210 | None:intergenic | 20.0% |
| !!! | CTAGTACTTTTTTTTTGAAT+CGG | + | chr2_1:25413192-25413211 | None:intergenic | 20.0% |
| !!! | TTTTTTATAAAATTGGGATG+TGG | + | chr2_1:25413321-25413340 | None:intergenic | 20.0% |
| !! | TAAAGAAATATATCATGACA+TGG | + | chr2_1:25413440-25413459 | None:intergenic | 20.0% |
| !! | AAAAAATATGGTTGTTCATT+AGG | + | chr2_1:25413584-25413603 | None:intergenic | 20.0% |
| !! | AAATATAATGTGAGTATAAG+AGG | - | chr2_1:25413651-25413670 | Msa0202800:intron | 20.0% |
| !! | ATATTCACATTATACACTTT+AGG | + | chr2_1:25413688-25413707 | None:intergenic | 20.0% |
| !!! | TGCTTACTTTTATTTATGTT+TGG | + | chr2_1:25413864-25413883 | None:intergenic | 20.0% |
| !! | TAGAATGGATATAGTAAAAA+AGG | - | chr2_1:25414036-25414055 | Msa0202800:intron | 20.0% |
| !! | AGTATTATATGAACTAGTAT+TGG | - | chr2_1:25414097-25414116 | Msa0202800:intron | 20.0% |
| !!! | ACTTTTTTTTTAGGGAAATA+CGG | + | chr2_1:25414298-25414317 | None:intergenic | 20.0% |
| !!! | CGGAAAATACTTTTTTTTTA+GGG | + | chr2_1:25414306-25414325 | None:intergenic | 20.0% |
| !!! | ACGGAAAATACTTTTTTTTT+AGG | + | chr2_1:25414307-25414326 | None:intergenic | 20.0% |
| !!! | TTTAACTTAAGAAAGTAGAA+TGG | - | chr2_1:25414463-25414482 | Msa0202800:intron | 20.0% |
| !! | AGCATAATGCTATAATATAT+TGG | - | chr2_1:25414873-25414892 | Msa0202800:intron | 20.0% |
| !! | GCATAATGCTATAATATATT+GGG | - | chr2_1:25414874-25414893 | Msa0202800:intron | 20.0% |
| !! | ATCTTTAAATTAAAGTGTAC+CGG | - | chr2_1:25414911-25414930 | Msa0202800:intron | 20.0% |
| !!! | AAAGGTTGATTTGTTAATTA+GGG | + | chr2_1:25415120-25415139 | None:intergenic | 20.0% |
| !!! | AAAAGGTTGATTTGTTAATT+AGG | + | chr2_1:25415121-25415140 | None:intergenic | 20.0% |
| !!! | AGATTTTTTTTTTTTGAGAG+AGG | + | chr2_1:25415158-25415177 | None:intergenic | 20.0% |
| !! | AAAAAAAAAAAATCTCTTGC+AGG | - | chr2_1:25415163-25415182 | Msa0202800:CDS | 20.0% |
| ! | ATATTGTCAAGACTAACAAA+AGG | + | chr2_1:25412654-25412673 | None:intergenic | 25.0% |
| !!! | TTCTTGACAGTGTTTTATTT+CGG | + | chr2_1:25412893-25412912 | None:intergenic | 25.0% |
| ! | ATAAAACACTGTCAAGAAAA+AGG | - | chr2_1:25412895-25412914 | Msa0202800:CDS | 25.0% |
| ! | TAAAACACTGTCAAGAAAAA+GGG | - | chr2_1:25412896-25412915 | Msa0202800:CDS | 25.0% |
| ! | TTAGGATGTTAAATAAAACG+TGG | + | chr2_1:25413566-25413585 | None:intergenic | 25.0% |
| !!! | GCTCCATAATAATTTTAGAA+TGG | - | chr2_1:25414021-25414040 | Msa0202800:intron | 25.0% |
| !! | TTATATGAACTAGTATTGGA+TGG | - | chr2_1:25414101-25414120 | Msa0202800:intron | 25.0% |
| !! | CAAAAATTTTCACTTGTCTT+CGG | + | chr2_1:25414506-25414525 | None:intergenic | 25.0% |
| ! | TGCAAATAAACGGATATAAT+TGG | - | chr2_1:25414637-25414656 | Msa0202800:intron | 25.0% |
| !! | GTTGAAATTTTACAATCTCA+GGG | - | chr2_1:25414659-25414678 | Msa0202800:intron | 25.0% |
| !! | TTGAAATTTTACAATCTCAG+GGG | - | chr2_1:25414660-25414679 | Msa0202800:intron | 25.0% |
| ! | TAATATATTGGGAGTTTCTA+CGG | - | chr2_1:25414885-25414904 | Msa0202800:intron | 25.0% |
| !! | TTTTATCATATTGACATGGA+GGG | + | chr2_1:25415296-25415315 | None:intergenic | 25.0% |
| !! | TTTTTATCATATTGACATGG+AGG | + | chr2_1:25415297-25415316 | None:intergenic | 25.0% |
| TAATTTCGAGATTGTACTCT+TGG | - | chr2_1:25412774-25412793 | Msa0202800:CDS | 30.0% | |
| GATTTGCAAAGTTCAAACTT+GGG | + | chr2_1:25412831-25412850 | None:intergenic | 30.0% | |
| ! | TGATTTGCAAAGTTCAAACT+TGG | + | chr2_1:25412832-25412851 | None:intergenic | 30.0% |
| TTGAACTTTGCAAATCATTG+TGG | - | chr2_1:25412835-25412854 | Msa0202800:CDS | 30.0% | |
| CACTAAGAAAGTTAGTATAG+AGG | + | chr2_1:25412996-25413015 | None:intergenic | 30.0% | |
| CTCTATACTAACTTTCTTAG+TGG | - | chr2_1:25412994-25413013 | Msa0202800:CDS | 30.0% | |
| AACTTTCTTAGTGGTCAATT+TGG | - | chr2_1:25413003-25413022 | Msa0202800:CDS | 30.0% | |
| GTTAAAATCAACACCATCTA+AGG | + | chr2_1:25413046-25413065 | None:intergenic | 30.0% | |
| !!! | GGTGTTGATTTTAACATTGA+AGG | - | chr2_1:25413051-25413070 | Msa0202800:CDS | 30.0% |
| !! | GTTGATTTTAACATTGAAGG+AGG | - | chr2_1:25413054-25413073 | Msa0202800:CDS | 30.0% |
| ! | TTTGTTGTCTTAGATTGTCA+AGG | + | chr2_1:25413113-25413132 | None:intergenic | 30.0% |
| ! | ACAATCTAAGACAACAAAAC+AGG | - | chr2_1:25413115-25413134 | Msa0202800:intron | 30.0% |
| !! | TATAGTTTCAAGTTGTACAG+CGG | + | chr2_1:25413232-25413251 | None:intergenic | 30.0% |
| TATTGGATGGACACAATATA+AGG | - | chr2_1:25414114-25414133 | Msa0202800:intron | 30.0% | |
| ATTGGATGGACACAATATAA+GGG | - | chr2_1:25414115-25414134 | Msa0202800:intron | 30.0% | |
| TCCGTATTAAATATGCAAAC+TGG | - | chr2_1:25414322-25414341 | Msa0202800:intron | 30.0% | |
| CCCAGTTTGCATATTTAATA+CGG | + | chr2_1:25414326-25414345 | None:intergenic | 30.0% | |
| CCGTATTAAATATGCAAACT+GGG | - | chr2_1:25414323-25414342 | Msa0202800:intron | 30.0% | |
| ATGATCAAAACTTTAGCACA+TGG | + | chr2_1:25414356-25414375 | None:intergenic | 30.0% | |
| CACTTCAAATTAAGTTCTCA+GGG | + | chr2_1:25414404-25414423 | None:intergenic | 30.0% | |
| TCACTTCAAATTAAGTTCTC+AGG | + | chr2_1:25414405-25414424 | None:intergenic | 30.0% | |
| TGGTGCAAAATAAATTTCTC+AGG | - | chr2_1:25414605-25414624 | Msa0202800:intron | 30.0% | |
| GGTGCAAAATAAATTTCTCA+GGG | - | chr2_1:25414606-25414625 | Msa0202800:intron | 30.0% | |
| ! | GGTTGAAATTTTACAATCTC+AGG | - | chr2_1:25414658-25414677 | Msa0202800:intron | 30.0% |
| ! | TGAAATTTTACAATCTCAGG+GGG | - | chr2_1:25414661-25414680 | Msa0202800:intron | 30.0% |
| CATGTTAAGGATTCCATAAA+TGG | + | chr2_1:25414834-25414853 | None:intergenic | 30.0% | |
| TATGCTAACTTGAGTTCTTA+AGG | + | chr2_1:25414859-25414878 | None:intergenic | 30.0% | |
| TAATCTGGCATATAACATTG+GGG | + | chr2_1:25415210-25415229 | None:intergenic | 30.0% | |
| GTAATCTGGCATATAACATT+GGG | + | chr2_1:25415211-25415230 | None:intergenic | 30.0% | |
| AGTAATCTGGCATATAACAT+TGG | + | chr2_1:25415212-25415231 | None:intergenic | 30.0% | |
| CTACATTGCTCTTAAAATCA+TGG | - | chr2_1:25415328-25415347 | Msa0202800:CDS | 30.0% | |
| TCTTAAAATCATGGAATGCT+TGG | - | chr2_1:25415337-25415356 | Msa0202800:CDS | 30.0% | |
| ! | ACCAAATAATACCGTTTTCA+TGG | - | chr2_1:25415374-25415393 | Msa0202800:CDS | 30.0% |
| ! | CCAAATAATACCGTTTTCAT+GGG | - | chr2_1:25415375-25415394 | Msa0202800:CDS | 30.0% |
| ! | ATAGTTGGAAGTTGGTTTAA+TGG | + | chr2_1:25415478-25415497 | None:intergenic | 30.0% |
| ATTAAACCAACTTCCAACTA+TGG | - | chr2_1:25415477-25415496 | Msa0202800:CDS | 30.0% | |
| TGATTACAGCTATCAGATAA+AGG | - | chr2_1:25415542-25415561 | Msa0202800:CDS | 30.0% | |
| !!! | TTTTAAGACACAAGTTTCAG+AGG | - | chr2_1:25415590-25415609 | Msa0202800:CDS | 30.0% |
| !! | GATGATGCTTTGATAGTGAA+GGG | + | chr2_1:25412679-25412698 | None:intergenic | 35.0% |
| !! | TGATGATGCTTTGATAGTGA+AGG | + | chr2_1:25412680-25412699 | None:intergenic | 35.0% |
| ! | ATCAAAGCATCATCAAGTGA+TGG | - | chr2_1:25412685-25412704 | Msa0202800:CDS | 35.0% |
| !!! | GAAACAGTTTTAGCTTCTTC+TGG | + | chr2_1:25412967-25412986 | None:intergenic | 35.0% |
| ! | AAGGAGGTACAAATCTTTAC+TGG | - | chr2_1:25413070-25413089 | Msa0202800:CDS | 35.0% |
| ! | AGGAGGTACAAATCTTTACT+GGG | - | chr2_1:25413071-25413090 | Msa0202800:CDS | 35.0% |
| ! | AAGATGAAGAACCCTGTTTT+GGG | + | chr2_1:25413371-25413390 | None:intergenic | 35.0% |
| ATGACATGGAGATATCAGAA+AGG | + | chr2_1:25413426-25413445 | None:intergenic | 35.0% | |
| CTTATTCTTTACGCACACAA+AGG | + | chr2_1:25413488-25413507 | None:intergenic | 35.0% | |
| CTTTGTGTGCGTAAAGAATA+AGG | - | chr2_1:25413486-25413505 | Msa0202800:intron | 35.0% | |
| GTTAAATAAAACGTGGTGTC+TGG | + | chr2_1:25413559-25413578 | None:intergenic | 35.0% | |
| AAATATGCAAACTGGGAACT+TGG | - | chr2_1:25414330-25414349 | Msa0202800:intron | 35.0% | |
| GAAGGTGAGATAAGAATAAC+TGG | - | chr2_1:25414549-25414568 | Msa0202800:intron | 35.0% | |
| ACATGTTAAGGAACTTAAGG+TGG | - | chr2_1:25414735-25414754 | Msa0202800:intron | 35.0% | |
| AGTTCTTAAGGCACATGTTA+AGG | + | chr2_1:25414847-25414866 | None:intergenic | 35.0% | |
| TTGATTTATGACAGGTGTAC+CGG | + | chr2_1:25414933-25414952 | None:intergenic | 35.0% | |
| ! | ATCAACCTTTTATCTCTTGC+AGG | - | chr2_1:25415130-25415149 | Msa0202800:intron | 35.0% |
| !!! | CAGTTTTGATAGCTTTGTCA+AGG | + | chr2_1:25415236-25415255 | None:intergenic | 35.0% |
| CTTGACAAAGCTATCAAAAC+TGG | - | chr2_1:25415234-25415253 | Msa0202800:CDS | 35.0% | |
| CCCATGAAAACGGTATTATT+TGG | + | chr2_1:25415378-25415397 | None:intergenic | 35.0% | |
| TTAGAAATGAGATCATCTGG+TGG | + | chr2_1:25415444-25415463 | None:intergenic | 35.0% | |
| ACCAGATGATCTCATTTCTA+AGG | - | chr2_1:25415443-25415462 | Msa0202800:CDS | 35.0% | |
| ACCTTAGAAATGAGATCATC+TGG | + | chr2_1:25415447-25415466 | None:intergenic | 35.0% | |
| ! | TTGGAAGTTGGTTTAATGGA+AGG | + | chr2_1:25415474-25415493 | None:intergenic | 35.0% |
| AAGCATAATTCCTCCATAGT+TGG | + | chr2_1:25415493-25415512 | None:intergenic | 35.0% | |
| ACTATGGAGGAATTATGCTT+TGG | - | chr2_1:25415493-25415512 | Msa0202800:CDS | 35.0% | |
| CTATGGAGGAATTATGCTTT+GGG | - | chr2_1:25415494-25415513 | Msa0202800:CDS | 35.0% | |
| TGGGATAGATTTCATGATGT+TGG | - | chr2_1:25415513-25415532 | Msa0202800:CDS | 35.0% | |
| ! | AAAGCATCATCAAGTGATGG+TGG | - | chr2_1:25412688-25412707 | Msa0202800:CDS | 40.0% |
| ! | AGGTGCCTTCTTTTACGTTT+TGG | + | chr2_1:25412732-25412751 | None:intergenic | 40.0% |
| AGTGTCACATGTTGATGTCA+AGG | + | chr2_1:25412752-25412771 | None:intergenic | 40.0% | |
| TTGACATCAACATGTGACAC+TGG | - | chr2_1:25412751-25412770 | Msa0202800:CDS | 40.0% | |
| ! | TTGGCTTTCCTCAATGTCTT+TGG | - | chr2_1:25412793-25412812 | Msa0202800:CDS | 40.0% |
| !! | CGGATTCGAGTTTTGTACAA+GGG | + | chr2_1:25412873-25412892 | None:intergenic | 40.0% |
| !! | TCGGATTCGAGTTTTGTACA+AGG | + | chr2_1:25412874-25412893 | None:intergenic | 40.0% |
| CTGTCAAGAAAAAGGGTTCA+AGG | - | chr2_1:25412903-25412922 | Msa0202800:CDS | 40.0% | |
| ! | TTACTTTCCCTCAGAGCATT+AGG | - | chr2_1:25412928-25412947 | Msa0202800:CDS | 40.0% |
| ! | TCTAAGGTAACACTTCCAAG+TGG | + | chr2_1:25413030-25413049 | None:intergenic | 40.0% |
| !! | CTTGGAAGTGTTACCTTAGA+TGG | - | chr2_1:25413030-25413049 | Msa0202800:CDS | 40.0% |
| ! | GAAGATGAAGAACCCTGTTT+TGG | + | chr2_1:25413372-25413391 | None:intergenic | 40.0% |
| GCGTAAAGAATAAGGTTGCT+TGG | - | chr2_1:25413494-25413513 | Msa0202800:intron | 40.0% | |
| !! | TTAACTTGTGCTCTTAGCAG+TGG | - | chr2_1:25413732-25413751 | Msa0202800:intron | 40.0% |
| CTCAAAGTGAAACAACATGC+TGG | - | chr2_1:25414585-25414604 | Msa0202800:intron | 40.0% | |
| GGTGTGCAAGTGCAAATAAA+CGG | - | chr2_1:25414627-25414646 | Msa0202800:intron | 40.0% | |
| GGCACATGTTAAGGAACTTA+AGG | - | chr2_1:25414732-25414751 | Msa0202800:intron | 40.0% | |
| AGGTACCTGCAAGAGATAAA+AGG | + | chr2_1:25415138-25415157 | None:intergenic | 40.0% | |
| ! | CAGGTACTTTTACTTGTCTG+CGG | - | chr2_1:25415182-25415201 | Msa0202800:CDS | 40.0% |
| GCTTTGTCAAGGTAGTAATC+TGG | + | chr2_1:25415225-25415244 | None:intergenic | 40.0% | |
| AAACCAACTTCCAACTATGG+AGG | - | chr2_1:25415480-25415499 | Msa0202800:CDS | 40.0% | |
| ATTCCTCCATAGTTGGAAGT+TGG | + | chr2_1:25415486-25415505 | None:intergenic | 40.0% | |
| TGGGGCCAAAACGTAAAAGA+AGG | - | chr2_1:25412724-25412743 | Msa0202800:CDS | 45.0% | |
| GCTTTCCTCAATGTCTTTGG+AGG | - | chr2_1:25412796-25412815 | Msa0202800:CDS | 45.0% | |
| ! | TTCCTCAATGTCTTTGGAGG+AGG | - | chr2_1:25412799-25412818 | Msa0202800:CDS | 45.0% |
| TTCCTCCTCCAAAGACATTG+AGG | + | chr2_1:25412804-25412823 | None:intergenic | 45.0% | |
| !! | GAGTTTTGTACAAGGGCTCT+CGG | + | chr2_1:25412866-25412885 | None:intergenic | 45.0% |
| AGCTTCTTCTGGTGAGCTAA+GGG | + | chr2_1:25412956-25412975 | None:intergenic | 45.0% | |
| TAGCTTCTTCTGGTGAGCTA+AGG | + | chr2_1:25412957-25412976 | None:intergenic | 45.0% | |
| AGTGGTCAATTTGGTCCACT+TGG | - | chr2_1:25413012-25413031 | Msa0202800:CDS | 45.0% | |
| TTTACTGGGATGACCTTGCT+AGG | - | chr2_1:25413085-25413104 | Msa0202800:intron | 45.0% | |
| TTACTGGGATGACCTTGCTA+GGG | - | chr2_1:25413086-25413105 | Msa0202800:intron | 45.0% | |
| TCTTGACCACATCCCAAAAC+AGG | - | chr2_1:25413356-25413375 | Msa0202800:intron | 45.0% | |
| CTTGACCACATCCCAAAACA+GGG | - | chr2_1:25413357-25413376 | Msa0202800:intron | 45.0% | |
| !!! | AAGAACCCTGTTTTGGGATG+TGG | + | chr2_1:25413365-25413384 | None:intergenic | 45.0% |
| GCTTGGTAGACCAAAGAAAC+TGG | - | chr2_1:25413511-25413530 | Msa0202800:intron | 45.0% | |
| AGACCAAAGAAACTGGCATC+TGG | - | chr2_1:25413518-25413537 | Msa0202800:intron | 45.0% | |
| AAGCCAGATGCCAGTTTCTT+TGG | + | chr2_1:25413524-25413543 | None:intergenic | 45.0% | |
| AAAGAAACTGGCATCTGGCT+TGG | - | chr2_1:25413523-25413542 | Msa0202800:intron | 45.0% | |
| ! | AAGAAACTGGCATCTGGCTT+GGG | - | chr2_1:25413524-25413543 | Msa0202800:intron | 45.0% |
| ! | AAAACGTGGTGTCTGGTCTT+TGG | + | chr2_1:25413552-25413571 | None:intergenic | 45.0% |
| TCACCTTCTGACGCATAAAG+AGG | + | chr2_1:25414537-25414556 | None:intergenic | 45.0% | |
| AACATGTGCCCTAAGAACCA+GGG | + | chr2_1:25414722-25414741 | None:intergenic | 45.0% | |
| TAACATGTGCCCTAAGAACC+AGG | + | chr2_1:25414723-25414742 | None:intergenic | 45.0% | |
| GGTTCTTAGGGCACATGTTA+AGG | - | chr2_1:25414723-25414742 | Msa0202800:intron | 45.0% | |
| TGCTGGTAGTCCCATGAAAA+CGG | + | chr2_1:25415388-25415407 | None:intergenic | 45.0% | |
| GGTGGTATATAACCACCACT+AGG | + | chr2_1:25415426-25415445 | None:intergenic | 45.0% | |
| CAAGTTTCAGAGGCAATAGC+TGG | - | chr2_1:25415600-25415619 | Msa0202800:CDS | 45.0% | |
| !!! | AATATCTTTTTTATAAAATT+GGG | + | chr2_1:25413327-25413346 | None:intergenic | 5.0% |
| !!! | AAATATCTTTTTTATAAAAT+TGG | + | chr2_1:25413328-25413347 | None:intergenic | 5.0% |
| !! | TACGTTTTGGCCCCAGTAGA+CGG | + | chr2_1:25412719-25412738 | None:intergenic | 50.0% |
| AAGGGCTCCTAATGCTCTGA+GGG | + | chr2_1:25412938-25412957 | None:intergenic | 50.0% | |
| TAAGGGCTCCTAATGCTCTG+AGG | + | chr2_1:25412939-25412958 | None:intergenic | 50.0% | |
| GATTGTCAAGGTCCCTAGCA+AGG | + | chr2_1:25413101-25413120 | None:intergenic | 50.0% | |
| GGCACGTGCAACACAGATTT+GGG | + | chr2_1:25413467-25413486 | None:intergenic | 50.0% | |
| AGGCACGTGCAACACAGATT+TGG | + | chr2_1:25413468-25413487 | None:intergenic | 50.0% | |
| GCACCTCTTTATGCGTCAGA+AGG | - | chr2_1:25414531-25414550 | Msa0202800:intron | 50.0% | |
| ! | TTTACAATCTCAGGGGGTGC+AGG | - | chr2_1:25414667-25414686 | Msa0202800:intron | 50.0% |
| AGGTGCACACCCTCAATAAG+AGG | - | chr2_1:25414687-25414706 | Msa0202800:intron | 50.0% | |
| TGCACACCCTCAATAAGAGG+TGG | - | chr2_1:25414690-25414709 | Msa0202800:intron | 50.0% | |
| ACATGTGCCCTAAGAACCAG+GGG | + | chr2_1:25414721-25414740 | None:intergenic | 50.0% | |
| ATGGTGGCATTGCCGTCTAC+TGG | - | chr2_1:25412704-25412723 | Msa0202800:CDS | 55.0% | |
| TGGTGGCATTGCCGTCTACT+GGG | - | chr2_1:25412705-25412724 | Msa0202800:CDS | 55.0% | |
| CTCTTAGCAGTGGCGTATCC+AGG | - | chr2_1:25413742-25413761 | Msa0202800:intron | 55.0% | |
| GCGGAGCCACCTCTTATTGA+GGG | + | chr2_1:25414699-25414718 | None:intergenic | 55.0% | |
| TCACCTGATGCAGCTCCTAG+TGG | - | chr2_1:25415408-25415427 | Msa0202800:CDS | 55.0% | |
| GGTGGCATTGCCGTCTACTG+GGG | - | chr2_1:25412706-25412725 | Msa0202800:CDS | 60.0% | |
| AGTGGCGTATCCAGGACCCT+GGG | - | chr2_1:25413750-25413769 | Msa0202800:intron | 60.0% | |
| GTATCCAGGACCCTGGGTCA+GGG | - | chr2_1:25413756-25413775 | Msa0202800:intron | 60.0% | |
| TATCCAGGACCCTGGGTCAG+GGG | - | chr2_1:25413757-25413776 | Msa0202800:intron | 60.0% | |
| !! | GTCAGGGGGTGCGGAGTTTT+TGG | - | chr2_1:25413772-25413791 | Msa0202800:intron | 60.0% |
| GGCGGAGCCACCTCTTATTG+AGG | + | chr2_1:25414700-25414719 | None:intergenic | 60.0% | |
| TGTGCCCTAAGAACCAGGGG+CGG | + | chr2_1:25414718-25414737 | None:intergenic | 60.0% | |
| GGAGCTGCATCAGGTGATGC+TGG | + | chr2_1:25415405-25415424 | None:intergenic | 60.0% | |
| CCACCACTAGGAGCTGCATC+AGG | + | chr2_1:25415414-25415433 | None:intergenic | 60.0% | |
| CCTGATGCAGCTCCTAGTGG+TGG | - | chr2_1:25415411-25415430 | Msa0202800:CDS | 60.0% | |
| CAGTGGCGTATCCAGGACCC+TGG | - | chr2_1:25413749-25413768 | Msa0202800:intron | 65.0% | |
| CGTATCCAGGACCCTGGGTC+AGG | - | chr2_1:25413755-25413774 | Msa0202800:intron | 65.0% | |
| ATCCAGGACCCTGGGTCAGG+GGG | - | chr2_1:25413758-25413777 | Msa0202800:intron | 65.0% | |
| ATAAGAGGTGGCTCCGCCCC+TGG | - | chr2_1:25414702-25414721 | Msa0202800:intron | 65.0% | |
| ! | TGGCTCCGCCCCTGGTTCTT+AGG | - | chr2_1:25414710-25414729 | Msa0202800:intron | 65.0% |
| ! | GGCTCCGCCCCTGGTTCTTA+GGG | - | chr2_1:25414711-25414730 | Msa0202800:intron | 65.0% |
| ACTCCGCACCCCCTGACCCA+GGG | + | chr2_1:25413769-25413788 | None:intergenic | 70.0% | |
| AACTCCGCACCCCCTGACCC+AGG | + | chr2_1:25413770-25413789 | None:intergenic | 70.0% | |
| CACCCCCTGACCCAGGGTCC+TGG | + | chr2_1:25413763-25413782 | None:intergenic | 75.0% | |
| GGACCCTGGGTCAGGGGGTG+CGG | - | chr2_1:25413763-25413782 | Msa0202800:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 25412625 | 25415662 | 25412625 | ID=Msa0202800;Name=Msa0202800 |
| chr2_1 | mRNA | 25412625 | 25415662 | 25412625 | ID=Msa0202800-mRNA-1;Parent=Msa0202800;Name=Msa0202800-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0|0|1|1|1|2|0|329 |
| chr2_1 | exon | 25415151 | 25415662 | 25415151 | ID=Msa0202800-mRNA-1:exon:9757;Parent=Msa0202800-mRNA-1 |
| chr2_1 | exon | 25412625 | 25413102 | 25412625 | ID=Msa0202800-mRNA-1:exon:9756;Parent=Msa0202800-mRNA-1 |
| chr2_1 | CDS | 25415151 | 25415662 | 25415151 | ID=Msa0202800-mRNA-1:cds;Parent=Msa0202800-mRNA-1 |
| chr2_1 | CDS | 25412625 | 25413102 | 25412625 | ID=Msa0202800-mRNA-1:cds;Parent=Msa0202800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
