Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0245900 | AAN10048.1 | 92.476 | 319 | 21 | 2 | 15 | 330 | 10 | 328 | 0.0 | 606 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0245900 | sp|P36910|CHIE_BETVU | 51.815 | 303 | 134 | 6 | 1 | 301 | 1 | 293 | 5.57e-99 | 296 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0245900 | Q8GTL6 | 92.476 | 319 | 21 | 2 | 15 | 330 | 10 | 328 | 0.0 | 606 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0195080 | Msa0245900 | 0.975989 | 5.638998e-141 | -8.615850e-47 |
| Msa0195100 | Msa0245900 | 0.886417 | 3.484510e-72 | -8.615850e-47 |
| Msa0195110 | Msa0245900 | 0.860638 | 1.795965e-63 | -8.615850e-47 |
| Msa0202800 | Msa0245900 | 0.857578 | 1.483449e-62 | -8.615850e-47 |
| Msa0230320 | Msa0245900 | 0.868978 | 4.365816e-66 | -8.615850e-47 |
| Msa0245890 | Msa0245900 | 0.807426 | 5.083271e-50 | -8.615850e-47 |
| Msa0245900 | Msa0284480 | 0.909080 | 8.458025e-82 | -8.615850e-47 |
| Msa0245900 | Msa0308630 | 0.871721 | 5.507936e-67 | -8.615850e-47 |
| Msa0245900 | Msa0322530 | 0.848738 | 5.060800e-60 | -8.615850e-47 |
| Msa0245900 | Msa0322540 | 0.966785 | 2.185223e-126 | -8.615850e-47 |
| Msa0245900 | Msa0389770 | 0.865192 | 7.058155e-65 | -8.615850e-47 |
| Msa0245900 | Msa0645300 | 0.802109 | 6.558029e-49 | -8.615850e-47 |
| Msa0245900 | Msa1315420 | 0.809691 | 1.669696e-50 | -8.615850e-47 |
| Msa0245900 | Msa1423780 | 0.863208 | 2.933400e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0245900 | MtrunA17_Chr2g0300141 | 90.303 | 330 | 31 | 1 | 1 | 330 | 1 | 329 | 0.0 | 602 |
| Msa0245900 | MtrunA17_Chr2g0300081 | 88.253 | 332 | 36 | 2 | 1 | 330 | 1 | 331 | 0.0 | 587 |
| Msa0245900 | MtrunA17_Chr2g0300101 | 86.667 | 330 | 42 | 2 | 1 | 330 | 1 | 328 | 0.0 | 564 |
| Msa0245900 | MtrunA17_Chr2g0300051 | 78.852 | 331 | 63 | 5 | 1 | 330 | 1 | 325 | 3.37e-175 | 488 |
| Msa0245900 | MtrunA17_Chr2g0300181 | 59.581 | 334 | 129 | 5 | 1 | 330 | 1 | 332 | 3.59e-136 | 389 |
| Msa0245900 | MtrunA17_Chr5g0418461 | 56.757 | 296 | 111 | 8 | 9 | 301 | 13 | 294 | 9.40e-103 | 303 |
| Msa0245900 | MtrunA17_Chr1g0202241 | 53.947 | 304 | 129 | 8 | 1 | 301 | 1 | 296 | 7.35e-101 | 298 |
| Msa0245900 | MtrunA17_Chr7g0240891 | 52.303 | 304 | 131 | 8 | 5 | 301 | 2 | 298 | 1.57e-99 | 295 |
| Msa0245900 | MtrunA17_Chr1g0202231 | 52.159 | 301 | 135 | 6 | 1 | 298 | 1 | 295 | 4.02e-98 | 293 |
| Msa0245900 | MtrunA17_Chr1g0202261 | 54.779 | 272 | 114 | 5 | 21 | 288 | 19 | 285 | 5.42e-95 | 284 |
| Msa0245900 | MtrunA17_Chr7g0275231 | 49.495 | 297 | 139 | 8 | 11 | 301 | 12 | 303 | 8.96e-90 | 270 |
| Msa0245900 | MtrunA17_Chr7g0274861 | 48.515 | 303 | 126 | 7 | 1 | 301 | 1 | 275 | 2.48e-88 | 266 |
| Msa0245900 | MtrunA17_Chr2g0300161 | 78.035 | 173 | 37 | 1 | 1 | 172 | 1 | 173 | 1.37e-86 | 258 |
| Msa0245900 | MtrunA17_Chr2g0331781 | 50.342 | 292 | 130 | 7 | 7 | 287 | 13 | 300 | 5.07e-84 | 258 |
| Msa0245900 | MtrunA17_Chr1g0202281 | 50.000 | 270 | 124 | 6 | 21 | 287 | 36 | 297 | 1.15e-83 | 255 |
| Msa0245900 | MtrunA17_Chr2g0300171 | 82.993 | 147 | 24 | 1 | 184 | 330 | 1 | 146 | 5.21e-83 | 248 |
| Msa0245900 | MtrunA17_Chr8g0361941 | 48.667 | 300 | 141 | 9 | 8 | 301 | 6 | 298 | 6.40e-82 | 250 |
| Msa0245900 | MtrunA17_Chr2g0300151 | 58.170 | 153 | 55 | 2 | 1 | 145 | 1 | 152 | 1.78e-53 | 172 |
| Msa0245900 | MtrunA17_Chr6g0459141 | 50.909 | 110 | 52 | 2 | 22 | 130 | 22 | 130 | 6.04e-30 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0245900 | AT5G24090.1 | 47.368 | 304 | 152 | 6 | 1 | 301 | 4 | 302 | 1.01e-90 | 273 |
Find 79 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCATGAACACGGTATTATT+TGG | 0.228231 | 2_2:+25876213 | None:intergenic |
| AACTTTCTTAGTGGTCAATT+TGG | 0.254606 | 2_2:-25877650 | Msa0245900:CDS |
| TTGGCTTTCCTAAATGTCTT+TGG | 0.269153 | 2_2:-25877866 | Msa0245900:CDS |
| CTTGACAAAGCTATCAAAAC+TGG | 0.277903 | 2_2:-25876354 | Msa0245900:CDS |
| TTCCTCCTCCAAAGACATTT+AGG | 0.281897 | 2_2:+25877858 | None:intergenic |
| ATAGTTGGAAGTTGGTTTAA+TGG | 0.284816 | 2_2:+25876113 | None:intergenic |
| GTCAAAATCAATACCATCTA+AGG | 0.296854 | 2_2:+25877610 | None:intergenic |
| CTTGGAAGTGTTACCTTAGA+TGG | 0.298818 | 2_2:-25877623 | Msa0245900:CDS |
| AAGGAGGTACAAATCTTTAC+TGG | 0.304361 | 2_2:-25877583 | Msa0245900:CDS |
| ATTAAACCAACTTCCAACTA+TGG | 0.306183 | 2_2:-25876111 | Msa0245900:CDS |
| AACACAAAATGGATAGAAAA+AGG | 0.309689 | 2_2:-25878039 | None:intergenic |
| AGGTGCCATCTCCTAGGTTT+TGG | 0.325186 | 2_2:+25877930 | None:intergenic |
| ACCAGATGATCTCATTTCTA+AGG | 0.326123 | 2_2:-25876145 | Msa0245900:CDS |
| GTGGTGGCATTGCCATCTAC+TGG | 0.335903 | 2_2:-25877955 | Msa0245900:CDS |
| CTTTCGATCGGAGGTGCAAT+AGG | 0.351560 | 2_2:-25877731 | Msa0245900:CDS |
| CTCCATACTAACTTTCTTAG+TGG | 0.352431 | 2_2:-25877659 | Msa0245900:CDS |
| ATAAAACACTGTCAACAAAA+AGG | 0.366978 | 2_2:-25877767 | Msa0245900:CDS |
| GACCCAAGTTGGAACTTTGC+AGG | 0.370420 | 2_2:-25877833 | Msa0245900:CDS |
| TCTTAAAATCATGGAAAGAT+TGG | 0.373901 | 2_2:-25876251 | Msa0245900:CDS |
| ACCAAATAATACCGTGTTCA+TGG | 0.382839 | 2_2:-25876214 | Msa0245900:CDS |
| GTAATCTGGCATAAAACATT+GGG | 0.383173 | 2_2:+25876380 | None:intergenic |
| TAATTACAAGATTGTACTCT+TGG | 0.383216 | 2_2:-25877885 | Msa0245900:CDS |
| GACCACTAAGAAAGTTAGTA+TGG | 0.384451 | 2_2:+25877657 | None:intergenic |
| GCGTAAAATATGATTTAATT+CGG | 0.386935 | 2_2:+25875934 | None:intergenic |
| CTATGGAGGAATTATGCTTT+GGG | 0.391332 | 2_2:-25876094 | Msa0245900:CDS |
| ACTATGGAGGAATTATGCTT+TGG | 0.402308 | 2_2:-25876095 | Msa0245900:CDS |
| CTACATTGCTCTTAAAATCA+TGG | 0.423108 | 2_2:-25876260 | Msa0245900:CDS |
| TGATTACAGCTATCAGATAA+AGG | 0.427044 | 2_2:-25876046 | Msa0245900:CDS |
| ACCTTAGAAATGAGATCATC+TGG | 0.432094 | 2_2:+25876144 | None:intergenic |
| TGGTGGCATTGCCATCTACT+GGG | 0.446566 | 2_2:-25877954 | Msa0245900:CDS |
| GCTTTCCTAAATGTCTTTGG+AGG | 0.450110 | 2_2:-25877863 | Msa0245900:CDS |
| TGGGATAGATTTCATGATGT+TGG | 0.451538 | 2_2:-25876075 | Msa0245900:CDS |
| CAAGTTTCTGAGGCAATAGC+TGG | 0.454724 | 2_2:-25875988 | Msa0245900:CDS |
| ACAATCTAAGACAACAAAAC+AGG | 0.458920 | 2_2:-25877538 | Msa0245900:intron |
| AAGCATAATTCCTCCATAGT+TGG | 0.460777 | 2_2:+25876098 | None:intergenic |
| ATGTCAAGGTGCCATCTCCT+AGG | 0.479456 | 2_2:+25877924 | None:intergenic |
| CCACCACTAGGAGCTGCATT+AGG | 0.480850 | 2_2:+25876177 | None:intergenic |
| TTGCAGGTCATTGTGGTGAC+TGG | 0.481375 | 2_2:-25877817 | Msa0245900:CDS |
| ATTCCTCCATAGTTGGAAGT+TGG | 0.484513 | 2_2:+25876105 | None:intergenic |
| TTTGTTGTCTTAGATTGTCA+AGG | 0.485852 | 2_2:+25877543 | None:intergenic |
| GCTTTGTCAAGGTAGTAATC+TGG | 0.487955 | 2_2:+25876366 | None:intergenic |
| TTCCTAAATGTCTTTGGAGG+AGG | 0.495140 | 2_2:-25877860 | Msa0245900:CDS |
| TTTACTGGGATGACCTTGCT+AGG | 0.501225 | 2_2:-25877568 | Msa0245900:CDS |
| TGACCTGCAAAGTTCCAACT+TGG | 0.502084 | 2_2:+25877830 | None:intergenic |
| CCAAATAATACCGTGTTCAT+GGG | 0.512696 | 2_2:-25876213 | Msa0245900:CDS |
| AGTAATCTGGCATAAAACAT+TGG | 0.515532 | 2_2:+25876379 | None:intergenic |
| TTGGAAGTTGGTTTAATGGA+AGG | 0.522478 | 2_2:+25876117 | None:intergenic |
| GGAGCTGCATTAGGTGCTGC+TGG | 0.526335 | 2_2:+25876186 | None:intergenic |
| TTATATCATATTGACATGGA+GGG | 0.540692 | 2_2:+25876295 | None:intergenic |
| TGAAGATGCTTTGATAGTGA+AGG | 0.540737 | 2_2:+25877979 | None:intergenic |
| GAAGATGCTTTGATAGTGAA+GGG | 0.554870 | 2_2:+25877980 | None:intergenic |
| TATGATTTAATTCGGAAACA+TGG | 0.556912 | 2_2:+25875942 | None:intergenic |
| AGTGGTCAATTTGGTCCACT+TGG | 0.566066 | 2_2:-25877641 | Msa0245900:CDS |
| TTACTGGGATGACCTTGCTA+GGG | 0.587273 | 2_2:-25877567 | Msa0245900:CDS |
| AGGAGGTACAAATCTTTACT+GGG | 0.587554 | 2_2:-25877582 | Msa0245900:CDS |
| GAGGAGGAAGAGACCCAAGT+TGG | 0.591012 | 2_2:-25877844 | Msa0245900:CDS |
| GATTGTCAAGGTCCCTAGCA+AGG | 0.595500 | 2_2:+25877555 | None:intergenic |
| TTTATATCATATTGACATGG+AGG | 0.598528 | 2_2:+25876294 | None:intergenic |
| ATCTACTGGGGCCAAAACCT+AGG | 0.601014 | 2_2:-25877941 | Msa0245900:CDS |
| TTGACATCAACATGTAACAC+TGG | 0.610391 | 2_2:-25877908 | Msa0245900:CDS |
| TGCTGGTAGTCCCATGAACA+CGG | 0.611631 | 2_2:+25876203 | None:intergenic |
| ATCAAAGCATCTTCAAGTGG+TGG | 0.612068 | 2_2:-25877971 | Msa0245900:CDS |
| GACCTGCAAAGTTCCAACTT+GGG | 0.612156 | 2_2:+25877831 | None:intergenic |
| TGGGGCCAAAACCTAGGAGA+TGG | 0.618215 | 2_2:-25877935 | Msa0245900:CDS |
| TTCTGGTGAGCTAAGAGTGT+AGG | 0.618334 | 2_2:+25877706 | None:intergenic |
| TTGACAAAGCTATCAAAACT+GGG | 0.637442 | 2_2:-25876353 | Msa0245900:CDS |
| AAACCAACTTCCAACTATGG+AGG | 0.642148 | 2_2:-25876108 | Msa0245900:CDS |
| ACTATCAAAGCATCTTCAAG+TGG | 0.643897 | 2_2:-25877974 | Msa0245900:CDS |
| TGGAACTTTGCAGGTCATTG+TGG | 0.646397 | 2_2:-25877824 | Msa0245900:CDS |
| GCACCTAATGCAGCTCCTAG+TGG | 0.656531 | 2_2:-25876180 | Msa0245900:CDS |
| AGTGTTACATGTTGATGTCA+AGG | 0.656681 | 2_2:+25877910 | None:intergenic |
| GGTGGCATTGCCATCTACTG+GGG | 0.662894 | 2_2:-25877953 | Msa0245900:CDS |
| CCTAATGCAGCTCCTAGTGG+TGG | 0.665138 | 2_2:-25876177 | Msa0245900:CDS |
| CACTAAGAAAGTTAGTATGG+AGG | 0.672810 | 2_2:+25877660 | None:intergenic |
| TAATCTGGCATAAAACATTG+GGG | 0.688163 | 2_2:+25876381 | None:intergenic |
| GGTGGTATATAACCACCACT+AGG | 0.701616 | 2_2:+25876165 | None:intergenic |
| ATATTGTTAAGACTAACAGA+AGG | 0.710230 | 2_2:+25878005 | None:intergenic |
| TCTAAGGTAACACTTCCAAG+TGG | 0.714737 | 2_2:+25877626 | None:intergenic |
| TTAGAAATGAGATCATCTGG+TGG | 0.728954 | 2_2:+25876147 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTCTTTGAAAAAATA+TGG | + | chr2_2:25876889-25876908 | None:intergenic | 10.0% |
| !!! | TATTTTTCTTTGAAAAAATA+TGG | + | chr2_2:25876889-25876908 | None:intergenic | 10.0% |
| !!! | TTTTCAAAGAAAAATATGTA+TGG | - | chr2_2:25876893-25876912 | Msa0245900:intron | 15.0% |
| !!! | TATAAGAGAAAGTATAATAT+AGG | - | chr2_2:25877006-25877025 | Msa0245900:intron | 15.0% |
| !!! | TAATTTTGTTTTATTAACAG+TGG | - | chr2_2:25877305-25877324 | Msa0245900:intron | 15.0% |
| !!! | TTTTCAAAGAAAAATATGTA+TGG | - | chr2_2:25876893-25876912 | Msa0245900:intron | 15.0% |
| !!! | TATAAGAGAAAGTATAATAT+AGG | - | chr2_2:25877006-25877025 | Msa0245900:intron | 15.0% |
| !!! | TAATTTTGTTTTATTAACAG+TGG | - | chr2_2:25877305-25877324 | Msa0245900:intron | 15.0% |
| !!! | TTTTTTATAAAATTGGGATG+TGG | + | chr2_2:25876613-25876632 | None:intergenic | 20.0% |
| !! | TAAAGAAATATATCATGACA+TGG | + | chr2_2:25876733-25876752 | None:intergenic | 20.0% |
| !! | AAAAAATATGGTTGTTCATT+AGG | + | chr2_2:25876877-25876896 | None:intergenic | 20.0% |
| !! | AAATATAATGTGAGTATAAG+AGG | - | chr2_2:25876952-25876971 | Msa0245900:intron | 20.0% |
| !! | ATATTCACATTATACACTTT+AGG | + | chr2_2:25876989-25877008 | None:intergenic | 20.0% |
| !! | GAATGATAAACATTATATGA+GGG | + | chr2_2:25877472-25877491 | None:intergenic | 20.0% |
| !! | TGAATGATAAACATTATATG+AGG | + | chr2_2:25877473-25877492 | None:intergenic | 20.0% |
| !!! | AAAGGTTGATTTGTTAATTA+GGG | + | chr2_2:25877544-25877563 | None:intergenic | 20.0% |
| !!! | AAAAGGTTGATTTGTTAATT+AGG | + | chr2_2:25877545-25877564 | None:intergenic | 20.0% |
| !!! | CTTTTTATATCATATTGACA+TGG | + | chr2_2:25877691-25877710 | None:intergenic | 20.0% |
| !!! | TTTTTTATAAAATTGGGATG+TGG | + | chr2_2:25876613-25876632 | None:intergenic | 20.0% |
| !! | TAAAGAAATATATCATGACA+TGG | + | chr2_2:25876733-25876752 | None:intergenic | 20.0% |
| !! | AAAAAATATGGTTGTTCATT+AGG | + | chr2_2:25876877-25876896 | None:intergenic | 20.0% |
| !! | AAATATAATGTGAGTATAAG+AGG | - | chr2_2:25876952-25876971 | Msa0245900:intron | 20.0% |
| !! | ATATTCACATTATACACTTT+AGG | + | chr2_2:25876989-25877008 | None:intergenic | 20.0% |
| !! | GAATGATAAACATTATATGA+GGG | + | chr2_2:25877472-25877491 | None:intergenic | 20.0% |
| !! | TGAATGATAAACATTATATG+AGG | + | chr2_2:25877473-25877492 | None:intergenic | 20.0% |
| !!! | AAAGGTTGATTTGTTAATTA+GGG | + | chr2_2:25877544-25877563 | None:intergenic | 20.0% |
| !!! | AAAAGGTTGATTTGTTAATT+AGG | + | chr2_2:25877545-25877564 | None:intergenic | 20.0% |
| !!! | CTTTTTATATCATATTGACA+TGG | + | chr2_2:25877691-25877710 | None:intergenic | 20.0% |
| ! | ATATTGTTAAGACTAACAGA+AGG | + | chr2_2:25875977-25875996 | None:intergenic | 25.0% |
| ! | TAATTACAAGATTGTACTCT+TGG | - | chr2_2:25876094-25876113 | Msa0245900:CDS | 25.0% |
| !!! | TTGTTGACAGTGTTTTATTT+CGG | + | chr2_2:25876210-25876229 | None:intergenic | 25.0% |
| ! | ATAAAACACTGTCAACAAAA+AGG | - | chr2_2:25876212-25876231 | Msa0245900:CDS | 25.0% |
| ! | TTAGGATGTTAAATAAAACG+TGG | + | chr2_2:25876859-25876878 | None:intergenic | 25.0% |
| ! | CTAAACAAAAATTCCACTTT+AGG | + | chr2_2:25877069-25877088 | None:intergenic | 25.0% |
| !!! | CTAAAGTGGAATTTTTGTTT+AGG | - | chr2_2:25877067-25877086 | Msa0245900:intron | 25.0% |
| !! | TAGTTAGTGGTTTGAAATAA+GGG | - | chr2_2:25877337-25877356 | Msa0245900:intron | 25.0% |
| ! | TTATATCATATTGACATGGA+GGG | + | chr2_2:25877687-25877706 | None:intergenic | 25.0% |
| ! | TTTATATCATATTGACATGG+AGG | + | chr2_2:25877688-25877707 | None:intergenic | 25.0% |
| ! | TCTTAAAATCATGGAAAGAT+TGG | - | chr2_2:25877728-25877747 | Msa0245900:CDS | 25.0% |
| ! | ATATTGTTAAGACTAACAGA+AGG | + | chr2_2:25875977-25875996 | None:intergenic | 25.0% |
| ! | TAATTACAAGATTGTACTCT+TGG | - | chr2_2:25876094-25876113 | Msa0245900:CDS | 25.0% |
| !!! | TTGTTGACAGTGTTTTATTT+CGG | + | chr2_2:25876210-25876229 | None:intergenic | 25.0% |
| ! | ATAAAACACTGTCAACAAAA+AGG | - | chr2_2:25876212-25876231 | Msa0245900:CDS | 25.0% |
| ! | TTAGGATGTTAAATAAAACG+TGG | + | chr2_2:25876859-25876878 | None:intergenic | 25.0% |
| ! | CTAAACAAAAATTCCACTTT+AGG | + | chr2_2:25877069-25877088 | None:intergenic | 25.0% |
| !!! | CTAAAGTGGAATTTTTGTTT+AGG | - | chr2_2:25877067-25877086 | Msa0245900:intron | 25.0% |
| !! | TAGTTAGTGGTTTGAAATAA+GGG | - | chr2_2:25877337-25877356 | Msa0245900:intron | 25.0% |
| ! | TTATATCATATTGACATGGA+GGG | + | chr2_2:25877687-25877706 | None:intergenic | 25.0% |
| ! | TTTATATCATATTGACATGG+AGG | + | chr2_2:25877688-25877707 | None:intergenic | 25.0% |
| ! | TCTTAAAATCATGGAAAGAT+TGG | - | chr2_2:25877728-25877747 | Msa0245900:CDS | 25.0% |
| !!! | TGTTGACAGTGTTTTATTTC+GGG | + | chr2_2:25876209-25876228 | None:intergenic | 30.0% |
| ! | GTCAAAGTTTTACTTTCGAT+CGG | - | chr2_2:25876236-25876255 | Msa0245900:CDS | 30.0% |
| AACTTTCTTAGTGGTCAATT+TGG | - | chr2_2:25876329-25876348 | Msa0245900:CDS | 30.0% | |
| GTCAAAATCAATACCATCTA+AGG | + | chr2_2:25876372-25876391 | None:intergenic | 30.0% | |
| !!! | GGTATTGATTTTGACATTGA+AGG | - | chr2_2:25876377-25876396 | Msa0245900:CDS | 30.0% |
| !! | ATTGATTTTGACATTGAAGG+AGG | - | chr2_2:25876380-25876399 | Msa0245900:CDS | 30.0% |
| ! | TTTGTTGTCTTAGATTGTCA+AGG | + | chr2_2:25876439-25876458 | None:intergenic | 30.0% |
| ! | ACAATCTAAGACAACAAAAC+AGG | - | chr2_2:25876441-25876460 | Msa0245900:intron | 30.0% |
| !! | TATAGTTTCAAGTTGTACAG+CGG | + | chr2_2:25876525-25876544 | None:intergenic | 30.0% |
| !! | AATGTTAACTTGTGCTCTTA+GGG | - | chr2_2:25877029-25877048 | Msa0245900:intron | 30.0% |
| TATGCTAACTTGAGTTCTTA+GGG | + | chr2_2:25877177-25877196 | None:intergenic | 30.0% | |
| TTATGCTAACTTGAGTTCTT+AGG | + | chr2_2:25877178-25877197 | None:intergenic | 30.0% | |
| ! | TAGGAGTATAGTTTATGAAG+TGG | + | chr2_2:25877216-25877235 | None:intergenic | 30.0% |
| AGAAATGTTCTACTTCTACT+AGG | + | chr2_2:25877235-25877254 | None:intergenic | 30.0% | |
| ! | GTAGTTAGTGGTTTGAAATA+AGG | - | chr2_2:25877336-25877355 | Msa0245900:intron | 30.0% |
| ! | AGTTAGTGGTTTGAAATAAG+GGG | - | chr2_2:25877338-25877357 | Msa0245900:intron | 30.0% |
| TTATATGAGGGCAATTTCTA+CGG | + | chr2_2:25877460-25877479 | None:intergenic | 30.0% | |
| TAATCTGGCATAAAACATTG+GGG | + | chr2_2:25877601-25877620 | None:intergenic | 30.0% | |
| GTAATCTGGCATAAAACATT+GGG | + | chr2_2:25877602-25877621 | None:intergenic | 30.0% | |
| AGTAATCTGGCATAAAACAT+TGG | + | chr2_2:25877603-25877622 | None:intergenic | 30.0% | |
| TTGACAAAGCTATCAAAACT+GGG | - | chr2_2:25877626-25877645 | Msa0245900:CDS | 30.0% | |
| CTACATTGCTCTTAAAATCA+TGG | - | chr2_2:25877719-25877738 | Msa0245900:CDS | 30.0% | |
| ! | ATAGTTGGAAGTTGGTTTAA+TGG | + | chr2_2:25877869-25877888 | None:intergenic | 30.0% |
| ATTAAACCAACTTCCAACTA+TGG | - | chr2_2:25877868-25877887 | Msa0245900:CDS | 30.0% | |
| TGATTACAGCTATCAGATAA+AGG | - | chr2_2:25877933-25877952 | Msa0245900:CDS | 30.0% | |
| !!! | TTTTAAGACACAAGTTTCTG+AGG | - | chr2_2:25877981-25878000 | Msa0245900:CDS | 30.0% |
| !!! | TGTTGACAGTGTTTTATTTC+GGG | + | chr2_2:25876209-25876228 | None:intergenic | 30.0% |
| ! | GTCAAAGTTTTACTTTCGAT+CGG | - | chr2_2:25876236-25876255 | Msa0245900:CDS | 30.0% |
| AACTTTCTTAGTGGTCAATT+TGG | - | chr2_2:25876329-25876348 | Msa0245900:CDS | 30.0% | |
| GTCAAAATCAATACCATCTA+AGG | + | chr2_2:25876372-25876391 | None:intergenic | 30.0% | |
| !!! | GGTATTGATTTTGACATTGA+AGG | - | chr2_2:25876377-25876396 | Msa0245900:CDS | 30.0% |
| !! | ATTGATTTTGACATTGAAGG+AGG | - | chr2_2:25876380-25876399 | Msa0245900:CDS | 30.0% |
| ! | TTTGTTGTCTTAGATTGTCA+AGG | + | chr2_2:25876439-25876458 | None:intergenic | 30.0% |
| ! | ACAATCTAAGACAACAAAAC+AGG | - | chr2_2:25876441-25876460 | Msa0245900:intron | 30.0% |
| !! | TATAGTTTCAAGTTGTACAG+CGG | + | chr2_2:25876525-25876544 | None:intergenic | 30.0% |
| !! | AATGTTAACTTGTGCTCTTA+GGG | - | chr2_2:25877029-25877048 | Msa0245900:intron | 30.0% |
| TATGCTAACTTGAGTTCTTA+GGG | + | chr2_2:25877177-25877196 | None:intergenic | 30.0% | |
| TTATGCTAACTTGAGTTCTT+AGG | + | chr2_2:25877178-25877197 | None:intergenic | 30.0% | |
| ! | TAGGAGTATAGTTTATGAAG+TGG | + | chr2_2:25877216-25877235 | None:intergenic | 30.0% |
| AGAAATGTTCTACTTCTACT+AGG | + | chr2_2:25877235-25877254 | None:intergenic | 30.0% | |
| ! | GTAGTTAGTGGTTTGAAATA+AGG | - | chr2_2:25877336-25877355 | Msa0245900:intron | 30.0% |
| ! | AGTTAGTGGTTTGAAATAAG+GGG | - | chr2_2:25877338-25877357 | Msa0245900:intron | 30.0% |
| TTATATGAGGGCAATTTCTA+CGG | + | chr2_2:25877460-25877479 | None:intergenic | 30.0% | |
| TAATCTGGCATAAAACATTG+GGG | + | chr2_2:25877601-25877620 | None:intergenic | 30.0% | |
| GTAATCTGGCATAAAACATT+GGG | + | chr2_2:25877602-25877621 | None:intergenic | 30.0% | |
| AGTAATCTGGCATAAAACAT+TGG | + | chr2_2:25877603-25877622 | None:intergenic | 30.0% | |
| TTGACAAAGCTATCAAAACT+GGG | - | chr2_2:25877626-25877645 | Msa0245900:CDS | 30.0% | |
| CTACATTGCTCTTAAAATCA+TGG | - | chr2_2:25877719-25877738 | Msa0245900:CDS | 30.0% | |
| ! | ATAGTTGGAAGTTGGTTTAA+TGG | + | chr2_2:25877869-25877888 | None:intergenic | 30.0% |
| ATTAAACCAACTTCCAACTA+TGG | - | chr2_2:25877868-25877887 | Msa0245900:CDS | 30.0% | |
| TGATTACAGCTATCAGATAA+AGG | - | chr2_2:25877933-25877952 | Msa0245900:CDS | 30.0% | |
| !!! | TTTTAAGACACAAGTTTCTG+AGG | - | chr2_2:25877981-25878000 | Msa0245900:CDS | 30.0% |
| !! | GAAGATGCTTTGATAGTGAA+GGG | + | chr2_2:25876002-25876021 | None:intergenic | 35.0% |
| !! | TGAAGATGCTTTGATAGTGA+AGG | + | chr2_2:25876003-25876022 | None:intergenic | 35.0% |
| ! | ACTATCAAAGCATCTTCAAG+TGG | - | chr2_2:25876005-25876024 | Msa0245900:CDS | 35.0% |
| AGTGTTACATGTTGATGTCA+AGG | + | chr2_2:25876072-25876091 | None:intergenic | 35.0% | |
| TTGACATCAACATGTAACAC+TGG | - | chr2_2:25876071-25876090 | Msa0245900:CDS | 35.0% | |
| ! | TTGGCTTTCCTAAATGTCTT+TGG | - | chr2_2:25876113-25876132 | Msa0245900:CDS | 35.0% |
| ! | AAAGTTTTACTTTCGATCGG+AGG | - | chr2_2:25876239-25876258 | Msa0245900:CDS | 35.0% |
| !!! | GCAACATTTTTAGCATCTTC+TGG | + | chr2_2:25876293-25876312 | None:intergenic | 35.0% |
| CACTAAGAAAGTTAGTATGG+AGG | + | chr2_2:25876322-25876341 | None:intergenic | 35.0% | |
| CTCCATACTAACTTTCTTAG+TGG | - | chr2_2:25876320-25876339 | Msa0245900:CDS | 35.0% | |
| GACCACTAAGAAAGTTAGTA+TGG | + | chr2_2:25876325-25876344 | None:intergenic | 35.0% | |
| ! | AAGGAGGTACAAATCTTTAC+TGG | - | chr2_2:25876396-25876415 | Msa0245900:CDS | 35.0% |
| ! | AGGAGGTACAAATCTTTACT+GGG | - | chr2_2:25876397-25876416 | Msa0245900:CDS | 35.0% |
| ! | AAGATGAAGAACCCTGTTTT+GGG | + | chr2_2:25876664-25876683 | None:intergenic | 35.0% |
| ATGACATGGAGATATCAGAA+AGG | + | chr2_2:25876719-25876738 | None:intergenic | 35.0% | |
| CTTATTCTTTACGCACACAA+AGG | + | chr2_2:25876781-25876800 | None:intergenic | 35.0% | |
| CTTTGTGTGCGTAAAGAATA+AGG | - | chr2_2:25876779-25876798 | Msa0245900:intron | 35.0% | |
| AGACCAAAGAAATTGGCATA+TGG | - | chr2_2:25876811-25876830 | Msa0245900:intron | 35.0% | |
| AAGCCATATGCCAATTTCTT+TGG | + | chr2_2:25876817-25876836 | None:intergenic | 35.0% | |
| AAAGAAATTGGCATATGGCT+TGG | - | chr2_2:25876816-25876835 | Msa0245900:intron | 35.0% | |
| AAGAAATTGGCATATGGCTT+GGG | - | chr2_2:25876817-25876836 | Msa0245900:intron | 35.0% | |
| !! | GAATGTTAACTTGTGCTCTT+AGG | - | chr2_2:25877028-25877047 | Msa0245900:intron | 35.0% |
| ACATGTTAAGGAACCTAAAG+TGG | - | chr2_2:25877053-25877072 | Msa0245900:intron | 35.0% | |
| GTGGTTAATAGAGTAGTTAG+TGG | - | chr2_2:25877324-25877343 | Msa0245900:intron | 35.0% | |
| ! | ATCAACCTTTTATCTCTTGC+AGG | - | chr2_2:25877554-25877573 | Msa0245900:CDS | 35.0% |
| AAGTACCTGCAAGAGATAAA+AGG | + | chr2_2:25877562-25877581 | None:intergenic | 35.0% | |
| !!! | CAGTTTTGATAGCTTTGTCA+AGG | + | chr2_2:25877627-25877646 | None:intergenic | 35.0% |
| CTTGACAAAGCTATCAAAAC+TGG | - | chr2_2:25877625-25877644 | Msa0245900:CDS | 35.0% | |
| ACCAAATAATACCGTGTTCA+TGG | - | chr2_2:25877765-25877784 | Msa0245900:CDS | 35.0% | |
| CCAAATAATACCGTGTTCAT+GGG | - | chr2_2:25877766-25877785 | Msa0245900:CDS | 35.0% | |
| TTAGAAATGAGATCATCTGG+TGG | + | chr2_2:25877835-25877854 | None:intergenic | 35.0% | |
| ACCAGATGATCTCATTTCTA+AGG | - | chr2_2:25877834-25877853 | Msa0245900:CDS | 35.0% | |
| ACCTTAGAAATGAGATCATC+TGG | + | chr2_2:25877838-25877857 | None:intergenic | 35.0% | |
| ! | TTGGAAGTTGGTTTAATGGA+AGG | + | chr2_2:25877865-25877884 | None:intergenic | 35.0% |
| AAGCATAATTCCTCCATAGT+TGG | + | chr2_2:25877884-25877903 | None:intergenic | 35.0% | |
| ACTATGGAGGAATTATGCTT+TGG | - | chr2_2:25877884-25877903 | Msa0245900:CDS | 35.0% | |
| CTATGGAGGAATTATGCTTT+GGG | - | chr2_2:25877885-25877904 | Msa0245900:CDS | 35.0% | |
| TGGGATAGATTTCATGATGT+TGG | - | chr2_2:25877904-25877923 | Msa0245900:CDS | 35.0% | |
| !! | GAAGATGCTTTGATAGTGAA+GGG | + | chr2_2:25876002-25876021 | None:intergenic | 35.0% |
| !! | TGAAGATGCTTTGATAGTGA+AGG | + | chr2_2:25876003-25876022 | None:intergenic | 35.0% |
| ! | ACTATCAAAGCATCTTCAAG+TGG | - | chr2_2:25876005-25876024 | Msa0245900:CDS | 35.0% |
| AGTGTTACATGTTGATGTCA+AGG | + | chr2_2:25876072-25876091 | None:intergenic | 35.0% | |
| TTGACATCAACATGTAACAC+TGG | - | chr2_2:25876071-25876090 | Msa0245900:CDS | 35.0% | |
| ! | TTGGCTTTCCTAAATGTCTT+TGG | - | chr2_2:25876113-25876132 | Msa0245900:CDS | 35.0% |
| ! | AAAGTTTTACTTTCGATCGG+AGG | - | chr2_2:25876239-25876258 | Msa0245900:CDS | 35.0% |
| !!! | GCAACATTTTTAGCATCTTC+TGG | + | chr2_2:25876293-25876312 | None:intergenic | 35.0% |
| CACTAAGAAAGTTAGTATGG+AGG | + | chr2_2:25876322-25876341 | None:intergenic | 35.0% | |
| CTCCATACTAACTTTCTTAG+TGG | - | chr2_2:25876320-25876339 | Msa0245900:CDS | 35.0% | |
| GACCACTAAGAAAGTTAGTA+TGG | + | chr2_2:25876325-25876344 | None:intergenic | 35.0% | |
| ! | AAGGAGGTACAAATCTTTAC+TGG | - | chr2_2:25876396-25876415 | Msa0245900:CDS | 35.0% |
| ! | AGGAGGTACAAATCTTTACT+GGG | - | chr2_2:25876397-25876416 | Msa0245900:CDS | 35.0% |
| ! | AAGATGAAGAACCCTGTTTT+GGG | + | chr2_2:25876664-25876683 | None:intergenic | 35.0% |
| ATGACATGGAGATATCAGAA+AGG | + | chr2_2:25876719-25876738 | None:intergenic | 35.0% | |
| CTTATTCTTTACGCACACAA+AGG | + | chr2_2:25876781-25876800 | None:intergenic | 35.0% | |
| CTTTGTGTGCGTAAAGAATA+AGG | - | chr2_2:25876779-25876798 | Msa0245900:intron | 35.0% | |
| AGACCAAAGAAATTGGCATA+TGG | - | chr2_2:25876811-25876830 | Msa0245900:intron | 35.0% | |
| AAGCCATATGCCAATTTCTT+TGG | + | chr2_2:25876817-25876836 | None:intergenic | 35.0% | |
| AAAGAAATTGGCATATGGCT+TGG | - | chr2_2:25876816-25876835 | Msa0245900:intron | 35.0% | |
| AAGAAATTGGCATATGGCTT+GGG | - | chr2_2:25876817-25876836 | Msa0245900:intron | 35.0% | |
| !! | GAATGTTAACTTGTGCTCTT+AGG | - | chr2_2:25877028-25877047 | Msa0245900:intron | 35.0% |
| ACATGTTAAGGAACCTAAAG+TGG | - | chr2_2:25877053-25877072 | Msa0245900:intron | 35.0% | |
| GTGGTTAATAGAGTAGTTAG+TGG | - | chr2_2:25877324-25877343 | Msa0245900:intron | 35.0% | |
| ! | ATCAACCTTTTATCTCTTGC+AGG | - | chr2_2:25877554-25877573 | Msa0245900:CDS | 35.0% |
| AAGTACCTGCAAGAGATAAA+AGG | + | chr2_2:25877562-25877581 | None:intergenic | 35.0% | |
| !!! | CAGTTTTGATAGCTTTGTCA+AGG | + | chr2_2:25877627-25877646 | None:intergenic | 35.0% |
| CTTGACAAAGCTATCAAAAC+TGG | - | chr2_2:25877625-25877644 | Msa0245900:CDS | 35.0% | |
| ACCAAATAATACCGTGTTCA+TGG | - | chr2_2:25877765-25877784 | Msa0245900:CDS | 35.0% | |
| CCAAATAATACCGTGTTCAT+GGG | - | chr2_2:25877766-25877785 | Msa0245900:CDS | 35.0% | |
| TTAGAAATGAGATCATCTGG+TGG | + | chr2_2:25877835-25877854 | None:intergenic | 35.0% | |
| ACCAGATGATCTCATTTCTA+AGG | - | chr2_2:25877834-25877853 | Msa0245900:CDS | 35.0% | |
| ACCTTAGAAATGAGATCATC+TGG | + | chr2_2:25877838-25877857 | None:intergenic | 35.0% | |
| ! | TTGGAAGTTGGTTTAATGGA+AGG | + | chr2_2:25877865-25877884 | None:intergenic | 35.0% |
| AAGCATAATTCCTCCATAGT+TGG | + | chr2_2:25877884-25877903 | None:intergenic | 35.0% | |
| ACTATGGAGGAATTATGCTT+TGG | - | chr2_2:25877884-25877903 | Msa0245900:CDS | 35.0% | |
| CTATGGAGGAATTATGCTTT+GGG | - | chr2_2:25877885-25877904 | Msa0245900:CDS | 35.0% | |
| TGGGATAGATTTCATGATGT+TGG | - | chr2_2:25877904-25877923 | Msa0245900:CDS | 35.0% | |
| ! | ATCAAAGCATCTTCAAGTGG+TGG | - | chr2_2:25876008-25876027 | Msa0245900:CDS | 40.0% |
| GCTTTCCTAAATGTCTTTGG+AGG | - | chr2_2:25876116-25876135 | Msa0245900:CDS | 40.0% | |
| ! | TTCCTAAATGTCTTTGGAGG+AGG | - | chr2_2:25876119-25876138 | Msa0245900:CDS | 40.0% |
| TTCCTCCTCCAAAGACATTT+AGG | + | chr2_2:25876124-25876143 | None:intergenic | 40.0% | |
| ! | TCTAAGGTAACACTTCCAAG+TGG | + | chr2_2:25876356-25876375 | None:intergenic | 40.0% |
| !! | CTTGGAAGTGTTACCTTAGA+TGG | - | chr2_2:25876356-25876375 | Msa0245900:CDS | 40.0% |
| ! | GAAGATGAAGAACCCTGTTT+TGG | + | chr2_2:25876665-25876684 | None:intergenic | 40.0% |
| GCGTAAAGAATAAGGTTGCT+TGG | - | chr2_2:25876787-25876806 | Msa0245900:intron | 40.0% | |
| GCTTGGTAGACCAAAGAAAT+TGG | - | chr2_2:25876804-25876823 | Msa0245900:intron | 40.0% | |
| AAAACGTGGTGTCTTGTCTT+TGG | + | chr2_2:25876845-25876864 | None:intergenic | 40.0% | |
| ! | CAGGTACTTTTACTTGTCTG+CGG | - | chr2_2:25877573-25877592 | Msa0245900:CDS | 40.0% |
| GCTTTGTCAAGGTAGTAATC+TGG | + | chr2_2:25877616-25877635 | None:intergenic | 40.0% | |
| CCCATGAACACGGTATTATT+TGG | + | chr2_2:25877769-25877788 | None:intergenic | 40.0% | |
| AAACCAACTTCCAACTATGG+AGG | - | chr2_2:25877871-25877890 | Msa0245900:CDS | 40.0% | |
| ATTCCTCCATAGTTGGAAGT+TGG | + | chr2_2:25877877-25877896 | None:intergenic | 40.0% | |
| ! | ATCAAAGCATCTTCAAGTGG+TGG | - | chr2_2:25876008-25876027 | Msa0245900:CDS | 40.0% |
| GCTTTCCTAAATGTCTTTGG+AGG | - | chr2_2:25876116-25876135 | Msa0245900:CDS | 40.0% | |
| ! | TTCCTAAATGTCTTTGGAGG+AGG | - | chr2_2:25876119-25876138 | Msa0245900:CDS | 40.0% |
| TTCCTCCTCCAAAGACATTT+AGG | + | chr2_2:25876124-25876143 | None:intergenic | 40.0% | |
| ! | TCTAAGGTAACACTTCCAAG+TGG | + | chr2_2:25876356-25876375 | None:intergenic | 40.0% |
| !! | CTTGGAAGTGTTACCTTAGA+TGG | - | chr2_2:25876356-25876375 | Msa0245900:CDS | 40.0% |
| ! | GAAGATGAAGAACCCTGTTT+TGG | + | chr2_2:25876665-25876684 | None:intergenic | 40.0% |
| GCGTAAAGAATAAGGTTGCT+TGG | - | chr2_2:25876787-25876806 | Msa0245900:intron | 40.0% | |
| GCTTGGTAGACCAAAGAAAT+TGG | - | chr2_2:25876804-25876823 | Msa0245900:intron | 40.0% | |
| AAAACGTGGTGTCTTGTCTT+TGG | + | chr2_2:25876845-25876864 | None:intergenic | 40.0% | |
| ! | CAGGTACTTTTACTTGTCTG+CGG | - | chr2_2:25877573-25877592 | Msa0245900:CDS | 40.0% |
| GCTTTGTCAAGGTAGTAATC+TGG | + | chr2_2:25877616-25877635 | None:intergenic | 40.0% | |
| CCCATGAACACGGTATTATT+TGG | + | chr2_2:25877769-25877788 | None:intergenic | 40.0% | |
| AAACCAACTTCCAACTATGG+AGG | - | chr2_2:25877871-25877890 | Msa0245900:CDS | 40.0% | |
| ATTCCTCCATAGTTGGAAGT+TGG | + | chr2_2:25877877-25877896 | None:intergenic | 40.0% | |
| GACCTGCAAAGTTCCAACTT+GGG | + | chr2_2:25876151-25876170 | None:intergenic | 45.0% | |
| TGACCTGCAAAGTTCCAACT+TGG | + | chr2_2:25876152-25876171 | None:intergenic | 45.0% | |
| TGGAACTTTGCAGGTCATTG+TGG | - | chr2_2:25876155-25876174 | Msa0245900:CDS | 45.0% | |
| !! | CGGGTTCGAGTTTTGTACAA+GGG | + | chr2_2:25876190-25876209 | None:intergenic | 45.0% |
| !! | TCGGGTTCGAGTTTTGTACA+AGG | + | chr2_2:25876191-25876210 | None:intergenic | 45.0% |
| ! | TTCTGGTGAGCTAAGAGTGT+AGG | + | chr2_2:25876276-25876295 | None:intergenic | 45.0% |
| AGTGGTCAATTTGGTCCACT+TGG | - | chr2_2:25876338-25876357 | Msa0245900:CDS | 45.0% | |
| TTTACTGGGATGACCTTGCT+AGG | - | chr2_2:25876411-25876430 | Msa0245900:intron | 45.0% | |
| TTACTGGGATGACCTTGCTA+GGG | - | chr2_2:25876412-25876431 | Msa0245900:intron | 45.0% | |
| TCTTGACCACATCCCAAAAC+AGG | - | chr2_2:25876649-25876668 | Msa0245900:intron | 45.0% | |
| CTTGACCACATCCCAAAACA+GGG | - | chr2_2:25876650-25876669 | Msa0245900:intron | 45.0% | |
| !!! | AAGAACCCTGTTTTGGGATG+TGG | + | chr2_2:25876658-25876677 | None:intergenic | 45.0% |
| TGCTCTTAGGGCACATGTTA+AGG | - | chr2_2:25877041-25877060 | Msa0245900:intron | 45.0% | |
| GGTGGTATATAACCACCACT+AGG | + | chr2_2:25877817-25877836 | None:intergenic | 45.0% | |
| !! | CAAGTTTCTGAGGCAATAGC+TGG | - | chr2_2:25877991-25878010 | Msa0245900:CDS | 45.0% |
| GACCTGCAAAGTTCCAACTT+GGG | + | chr2_2:25876151-25876170 | None:intergenic | 45.0% | |
| TGACCTGCAAAGTTCCAACT+TGG | + | chr2_2:25876152-25876171 | None:intergenic | 45.0% | |
| TGGAACTTTGCAGGTCATTG+TGG | - | chr2_2:25876155-25876174 | Msa0245900:CDS | 45.0% | |
| !! | CGGGTTCGAGTTTTGTACAA+GGG | + | chr2_2:25876190-25876209 | None:intergenic | 45.0% |
| !! | TCGGGTTCGAGTTTTGTACA+AGG | + | chr2_2:25876191-25876210 | None:intergenic | 45.0% |
| ! | TTCTGGTGAGCTAAGAGTGT+AGG | + | chr2_2:25876276-25876295 | None:intergenic | 45.0% |
| AGTGGTCAATTTGGTCCACT+TGG | - | chr2_2:25876338-25876357 | Msa0245900:CDS | 45.0% | |
| TTTACTGGGATGACCTTGCT+AGG | - | chr2_2:25876411-25876430 | Msa0245900:intron | 45.0% | |
| TTACTGGGATGACCTTGCTA+GGG | - | chr2_2:25876412-25876431 | Msa0245900:intron | 45.0% | |
| TCTTGACCACATCCCAAAAC+AGG | - | chr2_2:25876649-25876668 | Msa0245900:intron | 45.0% | |
| CTTGACCACATCCCAAAACA+GGG | - | chr2_2:25876650-25876669 | Msa0245900:intron | 45.0% | |
| !!! | AAGAACCCTGTTTTGGGATG+TGG | + | chr2_2:25876658-25876677 | None:intergenic | 45.0% |
| TGCTCTTAGGGCACATGTTA+AGG | - | chr2_2:25877041-25877060 | Msa0245900:intron | 45.0% | |
| GGTGGTATATAACCACCACT+AGG | + | chr2_2:25877817-25877836 | None:intergenic | 45.0% | |
| !! | CAAGTTTCTGAGGCAATAGC+TGG | - | chr2_2:25877991-25878010 | Msa0245900:CDS | 45.0% |
| !!! | AATATCTTTTTTATAAAATT+GGG | + | chr2_2:25876619-25876638 | None:intergenic | 5.0% |
| !!! | AAATATCTTTTTTATAAAAT+TGG | + | chr2_2:25876620-25876639 | None:intergenic | 5.0% |
| !! | TAATAAATATTTAACATTTA+TGG | - | chr2_2:25877136-25877155 | Msa0245900:intron | 5.0% |
| !!! | AATATCTTTTTTATAAAATT+GGG | + | chr2_2:25876619-25876638 | None:intergenic | 5.0% |
| !!! | AAATATCTTTTTTATAAAAT+TGG | + | chr2_2:25876620-25876639 | None:intergenic | 5.0% |
| !! | TAATAAATATTTAACATTTA+TGG | - | chr2_2:25877136-25877155 | Msa0245900:intron | 5.0% |
| TGGTGGCATTGCCATCTACT+GGG | - | chr2_2:25876025-25876044 | Msa0245900:CDS | 50.0% | |
| !! | TAGGTTTTGGCCCCAGTAGA+TGG | + | chr2_2:25876039-25876058 | None:intergenic | 50.0% |
| ATCTACTGGGGCCAAAACCT+AGG | - | chr2_2:25876038-25876057 | Msa0245900:CDS | 50.0% | |
| !! | AGGTGCCATCTCCTAGGTTT+TGG | + | chr2_2:25876052-25876071 | None:intergenic | 50.0% |
| ! | ATGTCAAGGTGCCATCTCCT+AGG | + | chr2_2:25876058-25876077 | None:intergenic | 50.0% |
| ! | GACCCAAGTTGGAACTTTGC+AGG | - | chr2_2:25876146-25876165 | Msa0245900:CDS | 50.0% |
| TTGCAGGTCATTGTGGTGAC+TGG | - | chr2_2:25876162-25876181 | Msa0245900:CDS | 50.0% | |
| ! | CTTTCGATCGGAGGTGCAAT+AGG | - | chr2_2:25876248-25876267 | Msa0245900:CDS | 50.0% |
| GATTGTCAAGGTCCCTAGCA+AGG | + | chr2_2:25876427-25876446 | None:intergenic | 50.0% | |
| GGCACGTGCAACACAGATTT+GGG | + | chr2_2:25876760-25876779 | None:intergenic | 50.0% | |
| AGGCACGTGCAACACAGATT+TGG | + | chr2_2:25876761-25876780 | None:intergenic | 50.0% | |
| TGCTGGTAGTCCCATGAACA+CGG | + | chr2_2:25877779-25877798 | None:intergenic | 50.0% | |
| TGGTGGCATTGCCATCTACT+GGG | - | chr2_2:25876025-25876044 | Msa0245900:CDS | 50.0% | |
| !! | TAGGTTTTGGCCCCAGTAGA+TGG | + | chr2_2:25876039-25876058 | None:intergenic | 50.0% |
| ATCTACTGGGGCCAAAACCT+AGG | - | chr2_2:25876038-25876057 | Msa0245900:CDS | 50.0% | |
| !! | AGGTGCCATCTCCTAGGTTT+TGG | + | chr2_2:25876052-25876071 | None:intergenic | 50.0% |
| ! | ATGTCAAGGTGCCATCTCCT+AGG | + | chr2_2:25876058-25876077 | None:intergenic | 50.0% |
| ! | GACCCAAGTTGGAACTTTGC+AGG | - | chr2_2:25876146-25876165 | Msa0245900:CDS | 50.0% |
| TTGCAGGTCATTGTGGTGAC+TGG | - | chr2_2:25876162-25876181 | Msa0245900:CDS | 50.0% | |
| ! | CTTTCGATCGGAGGTGCAAT+AGG | - | chr2_2:25876248-25876267 | Msa0245900:CDS | 50.0% |
| GATTGTCAAGGTCCCTAGCA+AGG | + | chr2_2:25876427-25876446 | None:intergenic | 50.0% | |
| GGCACGTGCAACACAGATTT+GGG | + | chr2_2:25876760-25876779 | None:intergenic | 50.0% | |
| AGGCACGTGCAACACAGATT+TGG | + | chr2_2:25876761-25876780 | None:intergenic | 50.0% | |
| TGCTGGTAGTCCCATGAACA+CGG | + | chr2_2:25877779-25877798 | None:intergenic | 50.0% | |
| GTGGTGGCATTGCCATCTAC+TGG | - | chr2_2:25876024-25876043 | Msa0245900:CDS | 55.0% | |
| GGTGGCATTGCCATCTACTG+GGG | - | chr2_2:25876026-25876045 | Msa0245900:CDS | 55.0% | |
| TGGGGCCAAAACCTAGGAGA+TGG | - | chr2_2:25876044-25876063 | Msa0245900:CDS | 55.0% | |
| GAGGAGGAAGAGACCCAAGT+TGG | - | chr2_2:25876135-25876154 | Msa0245900:CDS | 55.0% | |
| GCACCTAATGCAGCTCCTAG+TGG | - | chr2_2:25877799-25877818 | Msa0245900:CDS | 55.0% | |
| CCACCACTAGGAGCTGCATT+AGG | + | chr2_2:25877805-25877824 | None:intergenic | 55.0% | |
| CCTAATGCAGCTCCTAGTGG+TGG | - | chr2_2:25877802-25877821 | Msa0245900:CDS | 55.0% | |
| GTGGTGGCATTGCCATCTAC+TGG | - | chr2_2:25876024-25876043 | Msa0245900:CDS | 55.0% | |
| GGTGGCATTGCCATCTACTG+GGG | - | chr2_2:25876026-25876045 | Msa0245900:CDS | 55.0% | |
| TGGGGCCAAAACCTAGGAGA+TGG | - | chr2_2:25876044-25876063 | Msa0245900:CDS | 55.0% | |
| GAGGAGGAAGAGACCCAAGT+TGG | - | chr2_2:25876135-25876154 | Msa0245900:CDS | 55.0% | |
| GCACCTAATGCAGCTCCTAG+TGG | - | chr2_2:25877799-25877818 | Msa0245900:CDS | 55.0% | |
| CCACCACTAGGAGCTGCATT+AGG | + | chr2_2:25877805-25877824 | None:intergenic | 55.0% | |
| CCTAATGCAGCTCCTAGTGG+TGG | - | chr2_2:25877802-25877821 | Msa0245900:CDS | 55.0% | |
| ! | GGAGCTGCATTAGGTGCTGC+TGG | + | chr2_2:25877796-25877815 | None:intergenic | 60.0% |
| ! | GGAGCTGCATTAGGTGCTGC+TGG | + | chr2_2:25877796-25877815 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 25875948 | 25878053 | 25875948 | ID=Msa0245900;Name=Msa0245900 |
| chr2_2 | mRNA | 25875948 | 25878053 | 25875948 | ID=Msa0245900-mRNA-1;Parent=Msa0245900;Name=Msa0245900-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0|0|1|1|1|2|0|330 |
| chr2_2 | exon | 25877539 | 25878053 | 25877539 | ID=Msa0245900-mRNA-1:exon:9720;Parent=Msa0245900-mRNA-1 |
| chr2_2 | exon | 25875948 | 25876425 | 25875948 | ID=Msa0245900-mRNA-1:exon:9719;Parent=Msa0245900-mRNA-1 |
| chr2_2 | CDS | 25877539 | 25878053 | 25877539 | ID=Msa0245900-mRNA-1:cds;Parent=Msa0245900-mRNA-1 |
| chr2_2 | CDS | 25875948 | 25876425 | 25875948 | ID=Msa0245900-mRNA-1:cds;Parent=Msa0245900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
