Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0284480 | XP_013463481.1 | 66.234 | 77 | 24 | 1 | 261 | 335 | 171 | 247 | 3.04e-23 | 110 |
| Msa0284480 | XP_013463481.1 | 71.951 | 328 | 26 | 4 | 1 | 263 | 1 | 327 | 3.04e-148 | 432 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0284480 | sp|P29024|CHIA_PHAAN | 43.836 | 292 | 96 | 9 | 3 | 232 | 9 | 294 | 4.03e-62 | 204 |
| Msa0284480 | sp|P29024|CHIA_PHAAN | 45.652 | 92 | 47 | 2 | 266 | 357 | 179 | 267 | 2.78e-16 | 81.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0284480 | A0A072V7A7 | 66.234 | 77 | 24 | 1 | 261 | 335 | 171 | 247 | 1.45e-23 | 110 |
| Msa0284480 | A0A072V7A7 | 71.951 | 328 | 26 | 4 | 1 | 263 | 1 | 327 | 1.45e-148 | 432 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0195080 | Msa0284480 | 0.895343 | 1.048484e-75 | -8.615850e-47 |
| Msa0195100 | Msa0284480 | 0.878337 | 3.047383e-69 | -8.615850e-47 |
| Msa0195110 | Msa0284480 | 0.870216 | 1.724961e-66 | -8.615850e-47 |
| Msa0202800 | Msa0284480 | 0.847043 | 1.483760e-59 | -8.615850e-47 |
| Msa0230320 | Msa0284480 | 0.867107 | 1.745665e-65 | -8.615850e-47 |
| Msa0245900 | Msa0284480 | 0.909080 | 8.458025e-82 | -8.615850e-47 |
| Msa0284480 | Msa0308630 | 0.877904 | 4.321131e-69 | -8.615850e-47 |
| Msa0284480 | Msa0322530 | 0.859869 | 3.068531e-63 | -8.615850e-47 |
| Msa0284480 | Msa0322540 | 0.901813 | 1.832597e-78 | -8.615850e-47 |
| Msa0284480 | Msa0389770 | 0.858932 | 5.863640e-63 | -8.615850e-47 |
| Msa0284480 | Msa1315420 | 0.803248 | 3.815945e-49 | -8.615850e-47 |
| Msa0284480 | Msa1423780 | 0.881722 | 1.895030e-70 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0284480 | MtrunA17_Chr2g0300141 | 71.951 | 328 | 26 | 4 | 1 | 263 | 1 | 327 | 2.80e-152 | 432 |
| Msa0284480 | MtrunA17_Chr2g0300141 | 66.234 | 77 | 24 | 1 | 261 | 335 | 171 | 247 | 2.80e-27 | 110 |
| Msa0284480 | MtrunA17_Chr2g0300081 | 70.606 | 330 | 29 | 5 | 1 | 263 | 1 | 329 | 2.70e-148 | 422 |
| Msa0284480 | MtrunA17_Chr2g0300081 | 64.935 | 77 | 25 | 1 | 261 | 335 | 173 | 249 | 6.53e-26 | 106 |
| Msa0284480 | MtrunA17_Chr2g0300101 | 70.031 | 327 | 33 | 4 | 1 | 263 | 1 | 326 | 6.03e-145 | 413 |
| Msa0284480 | MtrunA17_Chr2g0300101 | 65.333 | 75 | 24 | 1 | 263 | 335 | 173 | 247 | 1.16e-25 | 105 |
| Msa0284480 | MtrunA17_Chr2g0300051 | 61.890 | 328 | 55 | 6 | 1 | 263 | 1 | 323 | 9.80e-116 | 338 |
| Msa0284480 | MtrunA17_Chr2g0300051 | 66.667 | 75 | 23 | 1 | 263 | 335 | 170 | 244 | 1.99e-25 | 104 |
| Msa0284480 | MtrunA17_Chr2g0300181 | 50.453 | 331 | 95 | 6 | 1 | 263 | 1 | 330 | 2.76e-98 | 295 |
| Msa0284480 | MtrunA17_Chr2g0300181 | 54.667 | 75 | 32 | 1 | 260 | 332 | 172 | 246 | 2.37e-18 | 85.1 |
| Msa0284480 | MtrunA17_Chr2g0300161 | 73.620 | 163 | 35 | 3 | 1 | 155 | 1 | 163 | 2.07e-68 | 213 |
| Msa0284480 | MtrunA17_Chr7g0240891 | 42.333 | 300 | 102 | 8 | 5 | 236 | 2 | 298 | 1.74e-64 | 207 |
| Msa0284480 | MtrunA17_Chr7g0240891 | 38.384 | 99 | 57 | 3 | 260 | 357 | 172 | 267 | 8.64e-14 | 71.2 |
| Msa0284480 | MtrunA17_Chr5g0418461 | 44.674 | 291 | 89 | 9 | 9 | 236 | 13 | 294 | 2.59e-63 | 204 |
| Msa0284480 | MtrunA17_Chr5g0418461 | 37.755 | 98 | 57 | 3 | 261 | 357 | 169 | 263 | 7.75e-12 | 65.5 |
| Msa0284480 | MtrunA17_Chr1g0202241 | 42.333 | 300 | 105 | 9 | 1 | 236 | 1 | 296 | 2.77e-63 | 204 |
| Msa0284480 | MtrunA17_Chr1g0202241 | 49.296 | 71 | 34 | 1 | 265 | 335 | 175 | 243 | 5.64e-17 | 80.5 |
| Msa0284480 | MtrunA17_Chr1g0202261 | 44.815 | 270 | 79 | 7 | 21 | 223 | 19 | 285 | 9.59e-62 | 200 |
| Msa0284480 | MtrunA17_Chr1g0202261 | 42.553 | 94 | 49 | 3 | 265 | 357 | 177 | 266 | 1.53e-15 | 76.3 |
| Msa0284480 | MtrunA17_Chr7g0275231 | 40.678 | 295 | 103 | 8 | 11 | 236 | 12 | 303 | 1.23e-60 | 197 |
| Msa0284480 | MtrunA17_Chr7g0275231 | 40.278 | 72 | 41 | 1 | 251 | 322 | 166 | 235 | 4.52e-11 | 63.2 |
| Msa0284480 | MtrunA17_Chr1g0202231 | 41.356 | 295 | 103 | 9 | 4 | 233 | 6 | 295 | 2.66e-58 | 192 |
| Msa0284480 | MtrunA17_Chr1g0202231 | 50.704 | 71 | 33 | 1 | 265 | 335 | 177 | 245 | 3.89e-17 | 81.3 |
| Msa0284480 | MtrunA17_Chr2g0300171 | 65.734 | 143 | 22 | 2 | 147 | 263 | 3 | 144 | 6.81e-55 | 177 |
| Msa0284480 | MtrunA17_Chr2g0300171 | 68.750 | 64 | 18 | 1 | 274 | 335 | 1 | 64 | 4.12e-23 | 94.0 |
| Msa0284480 | MtrunA17_Chr7g0274861 | 40.000 | 290 | 90 | 8 | 11 | 236 | 6 | 275 | 4.64e-52 | 174 |
| Msa0284480 | MtrunA17_Chr7g0274861 | 41.489 | 94 | 51 | 3 | 265 | 357 | 154 | 244 | 5.31e-14 | 71.6 |
| Msa0284480 | MtrunA17_Chr1g0202281 | 39.394 | 264 | 96 | 7 | 21 | 222 | 36 | 297 | 1.58e-51 | 174 |
| Msa0284480 | MtrunA17_Chr1g0202281 | 40.278 | 72 | 40 | 2 | 265 | 335 | 189 | 258 | 7.03e-12 | 65.5 |
| Msa0284480 | MtrunA17_Chr2g0331781 | 40.690 | 290 | 96 | 8 | 7 | 222 | 13 | 300 | 2.39e-51 | 174 |
| Msa0284480 | MtrunA17_Chr2g0331781 | 29.167 | 168 | 97 | 5 | 191 | 357 | 136 | 282 | 1.34e-13 | 71.2 |
| Msa0284480 | MtrunA17_Chr8g0361941 | 40.143 | 279 | 98 | 8 | 24 | 236 | 23 | 298 | 1.54e-49 | 168 |
| Msa0284480 | MtrunA17_Chr8g0361941 | 41.000 | 100 | 53 | 4 | 260 | 357 | 172 | 267 | 3.78e-14 | 72.4 |
| Msa0284480 | MtrunA17_Chr2g0300151 | 56.209 | 153 | 53 | 3 | 1 | 140 | 1 | 152 | 5.95e-48 | 159 |
| Msa0284480 | MtrunA17_Chr6g0459141 | 34.649 | 228 | 118 | 6 | 22 | 236 | 22 | 231 | 3.34e-32 | 120 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0284480 | AT5G24090.1 | 36.093 | 302 | 124 | 8 | 1 | 236 | 4 | 302 | 9.75e-51 | 172 |
| Msa0284480 | AT5G24090.1 | 43.056 | 72 | 38 | 2 | 265 | 335 | 181 | 250 | 2.14e-12 | 67.4 |
Find 66 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGACACAGCTATCAAAAT+TGG | 0.209040 | 2_3:+22525582 | Msa0284480:CDS |
| CCCATGAACACGGTATTATT+TGG | 0.228231 | 2_3:-22522701 | None:intergenic |
| AACTTTCTTAGTGGTCAATT+TGG | 0.254606 | 2_3:+22520959 | Msa0284480:CDS |
| TTGGCTTTCCTAAATGTCTT+TGG | 0.269153 | 2_3:+22520743 | Msa0284480:CDS |
| CTTGACAAAGCTATCAAAAC+TGG | 0.277903 | 2_3:+22522560 | Msa0284480:CDS |
| TTCCTCCTCCAAAGACATTT+AGG | 0.281897 | 2_3:-22520751 | None:intergenic |
| ATAGTTGGAAGTTGGTTTAA+TGG | 0.284816 | 2_3:-22522801 | None:intergenic |
| GTCAAAATCAATACCATCTA+AGG | 0.296854 | 2_3:-22520999 | None:intergenic |
| CTTGGAAGTGTTACCTTAGA+TGG | 0.298818 | 2_3:+22520986 | Msa0284480:CDS |
| ATTAAACCAACTTCCAACTA+TGG | 0.306183 | 2_3:+22522803 | Msa0284480:CDS |
| AACACAAAATGGATAGAAAA+AGG | 0.309689 | 2_3:+22520570 | None:intergenic |
| AGGTGCCATCTCCTAGGTTT+TGG | 0.325186 | 2_3:-22520679 | None:intergenic |
| GTGGTGGCATTGCCATCTAC+TGG | 0.335903 | 2_3:+22520654 | Msa0284480:CDS |
| ATAATCTGGCATAATACATT+TGG | 0.349220 | 2_3:-22525556 | None:intergenic |
| CTTTCGATCGGAGGTGCAAT+AGG | 0.351560 | 2_3:+22520878 | Msa0284480:CDS |
| CTCCATACTAACTTTCTTAG+TGG | 0.352431 | 2_3:+22520950 | Msa0284480:CDS |
| CATAAATCCTCCACACTTAC+GGG | 0.365978 | 2_3:-22525813 | None:intergenic |
| ATAAAACACTGTCAACAAAA+AGG | 0.366978 | 2_3:+22520842 | Msa0284480:CDS |
| TCTTAAAATCATGGAAAGAT+TGG | 0.373901 | 2_3:+22522663 | Msa0284480:CDS |
| TAATTACAAGATTGTACTCT+TGG | 0.383216 | 2_3:+22520724 | Msa0284480:CDS |
| GACCACTAAGAAAGTTAGTA+TGG | 0.384451 | 2_3:-22520952 | None:intergenic |
| CTACATTGCTCTTTCAATCA+TGG | 0.388911 | 2_3:+22525676 | Msa0284480:CDS |
| CTATGGAGGAATTATGCTTT+GGG | 0.391332 | 2_3:+22522820 | Msa0284480:CDS |
| ACTATGGAGGAATTATGCTT+TGG | 0.402308 | 2_3:+22522819 | Msa0284480:CDS |
| CTACATTGCTCTTAAAATCA+TGG | 0.423108 | 2_3:+22522654 | Msa0284480:CDS |
| TCATAAATCCTCCACACTTA+CGG | 0.424053 | 2_3:-22525814 | None:intergenic |
| TGATTACAGCTATCAGATAA+AGG | 0.427044 | 2_3:+22522868 | Msa0284480:CDS |
| TAATCTGGCATAATACATTT+GGG | 0.435074 | 2_3:-22525555 | None:intergenic |
| TTAGAAATGAGATCATTTGA+TGG | 0.435572 | 2_3:-22525758 | None:intergenic |
| TGGTGGCATTGCCATCTACT+GGG | 0.446566 | 2_3:+22520655 | Msa0284480:CDS |
| GCTTTCCTAAATGTCTTTGG+AGG | 0.450110 | 2_3:+22520746 | Msa0284480:CDS |
| TGGGATAGATTTCATGATGT+TGG | 0.451538 | 2_3:+22522839 | Msa0284480:CDS |
| TCTTTCAATCATGGGATGCT+TGG | 0.452854 | 2_3:+22525685 | Msa0284480:CDS |
| CAAGTTTCTGAGGCAATAGC+TGG | 0.454724 | 2_3:+22522926 | Msa0284480:CDS |
| GCTTGATCATATTGACATGA+AGG | 0.458306 | 2_3:-22525642 | None:intergenic |
| AAGCATAATTCCTCCATAGT+TGG | 0.460777 | 2_3:-22522816 | None:intergenic |
| ATGTCAAGGTGCCATCTCCT+AGG | 0.479456 | 2_3:-22520685 | None:intergenic |
| TACATTGCTCTTTCAATCAT+GGG | 0.479487 | 2_3:+22525677 | Msa0284480:CDS |
| TTGCAGGTCATTGTGGTGAC+TGG | 0.481375 | 2_3:+22520792 | Msa0284480:intron |
| ATTTGATGGTATAAAGATGT+TGG | 0.481871 | 2_3:-22525744 | None:intergenic |
| ATTCCTCCATAGTTGGAAGT+TGG | 0.484513 | 2_3:-22522809 | None:intergenic |
| GCTGTGTCAAGGTAATAATC+TGG | 0.485515 | 2_3:-22525570 | None:intergenic |
| TTCCTAAATGTCTTTGGAGG+AGG | 0.495140 | 2_3:+22520749 | Msa0284480:CDS |
| TTGGAAGTTGGTTTAATGGA+AGG | 0.522478 | 2_3:-22522797 | None:intergenic |
| CTTGATCATATTGACATGAA+GGG | 0.522737 | 2_3:-22525641 | None:intergenic |
| TTATATCATATTGACATGGA+GGG | 0.540692 | 2_3:-22522619 | None:intergenic |
| TGAAGATGCTTTGATAGTGA+AGG | 0.540737 | 2_3:-22520630 | None:intergenic |
| GAAGATGCTTTGATAGTGAA+GGG | 0.554870 | 2_3:-22520629 | None:intergenic |
| AGTGGTCAATTTGGTCCACT+TGG | 0.566066 | 2_3:+22520968 | Msa0284480:CDS |
| TTTATATCATATTGACATGG+AGG | 0.598528 | 2_3:-22522620 | None:intergenic |
| ATCTACTGGGGCCAAAACCT+AGG | 0.601014 | 2_3:+22520668 | Msa0284480:CDS |
| TTGACATCAACATGTAACAC+TGG | 0.610391 | 2_3:+22520701 | Msa0284480:CDS |
| ATCAAAGCATCTTCAAGTGG+TGG | 0.612068 | 2_3:+22520638 | Msa0284480:CDS |
| TGGGGCCAAAACCTAGGAGA+TGG | 0.618215 | 2_3:+22520674 | Msa0284480:CDS |
| ACTTGTCATACCCGTAAGTG+TGG | 0.621407 | 2_3:+22525803 | Msa0284480:CDS |
| TTCTGGTGAGCTGAGAGTGT+AGG | 0.637303 | 2_3:-22520903 | None:intergenic |
| TTGACAAAGCTATCAAAACT+GGG | 0.637442 | 2_3:+22522561 | Msa0284480:CDS |
| AAACCAACTTCCAACTATGG+AGG | 0.642148 | 2_3:+22522806 | Msa0284480:CDS |
| ACTATCAAAGCATCTTCAAG+TGG | 0.643897 | 2_3:+22520635 | Msa0284480:CDS |
| TGGAACTTTGCAGGTCATTG+TGG | 0.646397 | 2_3:+22520785 | Msa0284480:intron |
| AGTGTTACATGTTGATGTCA+AGG | 0.656681 | 2_3:-22520699 | None:intergenic |
| TGTCATACCCGTAAGTGTGG+AGG | 0.657655 | 2_3:+22525806 | Msa0284480:CDS |
| GGTGGCATTGCCATCTACTG+GGG | 0.662894 | 2_3:+22520656 | Msa0284480:CDS |
| CACTAAGAAAGTTAGTATGG+AGG | 0.672810 | 2_3:-22520949 | None:intergenic |
| ATATTGTTAAGACTAACAGA+AGG | 0.710230 | 2_3:-22520604 | None:intergenic |
| TCTAAGGTAACACTTCCAAG+TGG | 0.714737 | 2_3:-22520983 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATTATT+GGG | - | chr2_3:22521296-22521315 | None:intergenic | 0.0% |
| !! | TATATATATATATATATTAT+TGG | - | chr2_3:22524207-22524226 | None:intergenic | 0.0% |
| !! | TAATATATTATAAAAAAATA+TGG | + | chr2_3:22524852-22524871 | Msa0284480:intron | 0.0% |
| !!! | TATTTTTCTTTGAAAAAATA+TGG | - | chr2_3:22521547-22521566 | None:intergenic | 10.0% |
| !! | TAATTTCATATTATGAATTA+GGG | - | chr2_3:22521880-22521899 | None:intergenic | 10.0% |
| !! | TTAATTTCATATTATGAATT+AGG | - | chr2_3:22521881-22521900 | None:intergenic | 10.0% |
| !! | TAATAAATATTTACCATTTA+TGG | + | chr2_3:22522149-22522168 | Msa0284480:intron | 10.0% |
| !!! | TGAAATGATTTTTTTTTTAT+GGG | - | chr2_3:22522383-22522402 | None:intergenic | 10.0% |
| !!! | ATGAAATGATTTTTTTTTTA+TGG | - | chr2_3:22522384-22522403 | None:intergenic | 10.0% |
| !! | TAATAATAATTAAACATTGA+AGG | - | chr2_3:22525062-22525081 | None:intergenic | 10.0% |
| !! | AAAATCTTAAATCTTAAATA+TGG | - | chr2_3:22525194-22525213 | None:intergenic | 10.0% |
| !! | AATGTTAAAAATCTTAAATA+TGG | - | chr2_3:22525233-22525252 | None:intergenic | 10.0% |
| !!! | TTTTCAAAGAAAAATATGTA+TGG | + | chr2_3:22521551-22521570 | Msa0284480:intron | 15.0% |
| !! | ATCGAATAAAATATATACTT+CGG | + | chr2_3:22521639-22521658 | Msa0284480:intron | 15.0% |
| !!! | ACATAAAATCTTTTGAATTT+TGG | - | chr2_3:22523581-22523600 | None:intergenic | 15.0% |
| !! | TTTATATTAAGAAGAAAAAG+AGG | + | chr2_3:22523986-22524005 | Msa0284480:intron | 15.0% |
| !! | ATAAAATCATGTTACATTAT+CGG | + | chr2_3:22524148-22524167 | Msa0284480:intron | 15.0% |
| !! | AAAAAAAAAACAGTGTTAAA+CGG | - | chr2_3:22524339-22524358 | None:intergenic | 15.0% |
| !!! | TTTTTTATAAAATTGGGATG+TGG | - | chr2_3:22521244-22521263 | None:intergenic | 20.0% |
| !! | ATATATATATTATTGGGATG+TGG | - | chr2_3:22521290-22521309 | None:intergenic | 20.0% |
| !! | TAAAGAAATATATCATGACA+TGG | - | chr2_3:22521391-22521410 | None:intergenic | 20.0% |
| !! | TTAGAATGTTAAATAAAACG+TGG | - | chr2_3:22521517-22521536 | None:intergenic | 20.0% |
| !! | ATATTCACATTATACACTTT+AGG | - | chr2_3:22521813-22521832 | None:intergenic | 20.0% |
| !!! | TATGAGAGAAAGTATAATAT+AGG | + | chr2_3:22521830-22521849 | Msa0284480:intron | 20.0% |
| !! | ATATTATGAATTAGGGTTTA+GGG | - | chr2_3:22521873-22521892 | None:intergenic | 20.0% |
| !! | AATTTCATTTAACATGTTGT+AGG | - | chr2_3:22522000-22522019 | None:intergenic | 20.0% |
| !! | AGCATAATGCTATAATATAT+TGG | + | chr2_3:22522205-22522224 | Msa0284480:intron | 20.0% |
| !! | GCATAATGCTATAATATATT+GGG | + | chr2_3:22522206-22522225 | Msa0284480:intron | 20.0% |
| !!! | AACTTATTGATTTATGAAAC+AGG | - | chr2_3:22522299-22522318 | None:intergenic | 20.0% |
| !!! | AAAGGTTGATTTGTTAATTA+GGG | - | chr2_3:22522479-22522498 | None:intergenic | 20.0% |
| !!! | AAAAGGTTGATTTGTTAATT+AGG | - | chr2_3:22522480-22522499 | None:intergenic | 20.0% |
| !!! | CTTTTTATATCATATTGACA+TGG | - | chr2_3:22522626-22522645 | None:intergenic | 20.0% |
| !! | TATGATTTAATTCGTAAACA+TGG | - | chr2_3:22522975-22522994 | None:intergenic | 20.0% |
| !! | ACTATATATATGTATGAGTA+TGG | + | chr2_3:22523010-22523029 | Msa0284480:intron | 20.0% |
| !! | TAGGTACATAATATACATAA+AGG | - | chr2_3:22523120-22523139 | None:intergenic | 20.0% |
| !!! | TAAAATCTTTTGAATTTTGG+TGG | - | chr2_3:22523578-22523597 | None:intergenic | 20.0% |
| !!! | AAACAGATTGAGTTTTATTT+TGG | + | chr2_3:22523828-22523847 | Msa0284480:intron | 20.0% |
| !! | ATTGAATGCACAAAATTATA+TGG | + | chr2_3:22524437-22524456 | Msa0284480:intron | 20.0% |
| !! | TAAAGTGATTAAAGCTTAAT+TGG | + | chr2_3:22524517-22524536 | Msa0284480:intron | 20.0% |
| !! | TGGATATAAATTGTTTAATC+CGG | - | chr2_3:22524800-22524819 | None:intergenic | 20.0% |
| !! | TCAGTTCATCAATATTATAT+TGG | + | chr2_3:22524981-22525000 | Msa0284480:intron | 20.0% |
| !! | GTGTTTATGAGTAAAAAAAA+TGG | - | chr2_3:22525497-22525516 | None:intergenic | 20.0% |
| ! | ATATTGTTAAGACTAACAGA+AGG | - | chr2_3:22520607-22520626 | None:intergenic | 25.0% |
| ! | TAATTACAAGATTGTACTCT+TGG | + | chr2_3:22520724-22520743 | Msa0284480:CDS | 25.0% |
| !!! | TTGTTGACAGTGTTTTATTT+CGG | - | chr2_3:22520840-22520859 | None:intergenic | 25.0% |
| ! | ATAAAACACTGTCAACAAAA+AGG | + | chr2_3:22520842-22520861 | Msa0284480:CDS | 25.0% |
| ! | GCTTTCTTGTATTAAAACTT+TGG | + | chr2_3:22521661-22521680 | Msa0284480:intron | 25.0% |
| ! | ATTGGAAGAATTCTTTATAG+AGG | + | chr2_3:22521742-22521761 | Msa0284480:intron | 25.0% |
| ! | CATATTATGAATTAGGGTTT+AGG | - | chr2_3:22521874-22521893 | None:intergenic | 25.0% |
| !!! | TTTTGAGAATTGGAGAATTA+GGG | - | chr2_3:22521971-22521990 | None:intergenic | 25.0% |
| !!! | TTTTTGAGAATTGGAGAATT+AGG | - | chr2_3:22521972-22521991 | None:intergenic | 25.0% |
| !!! | TAGGTTTAGTTTTTGAGAAT+TGG | - | chr2_3:22521981-22522000 | None:intergenic | 25.0% |
| ! | CTAAACAAAAATTCCACTTT+AGG | - | chr2_3:22522082-22522101 | None:intergenic | 25.0% |
| !!! | CTAAAGTGGAATTTTTGTTT+AGG | + | chr2_3:22522080-22522099 | Msa0284480:intron | 25.0% |
| ! | ATGTTAAGGATTTCCATAAA+TGG | - | chr2_3:22522165-22522184 | None:intergenic | 25.0% |
| ! | TAATATATTGGGAGTTTCTA+CGG | + | chr2_3:22522217-22522236 | Msa0284480:intron | 25.0% |
| ! | ACCTTTAAATTAAAGTGTAC+CGG | + | chr2_3:22522243-22522262 | Msa0284480:intron | 25.0% |
| ! | TTATATCATATTGACATGGA+GGG | - | chr2_3:22522622-22522641 | None:intergenic | 25.0% |
| ! | TTTATATCATATTGACATGG+AGG | - | chr2_3:22522623-22522642 | None:intergenic | 25.0% |
| ! | TCTTAAAATCATGGAAAGAT+TGG | + | chr2_3:22522663-22522682 | Msa0284480:CDS | 25.0% |
| ! | GTTAAGAAAGAAAAATGATC+AGG | + | chr2_3:22523075-22523094 | Msa0284480:intron | 25.0% |
| !!! | TTTGATTTTTAGTGCAACAA+AGG | + | chr2_3:22523424-22523443 | Msa0284480:intron | 25.0% |
| ! | ATGTAGAAAATAGGGATAAT+TGG | + | chr2_3:22523758-22523777 | Msa0284480:intron | 25.0% |
| ! | ACAATATACAAGAACAAGAA+TGG | + | chr2_3:22524312-22524331 | Msa0284480:intron | 25.0% |
| ! | AGTTTACATAGATGTTAAAC+CGG | + | chr2_3:22524778-22524797 | Msa0284480:intron | 25.0% |
| ! | ATAAAACAAATAGCTATCAG+TGG | + | chr2_3:22525098-22525117 | Msa0284480:intron | 25.0% |
| ! | TAAATCTTAAATATGGCTCA+TGG | - | chr2_3:22525187-22525206 | None:intergenic | 25.0% |
| ! | AAAATCTTAAATATGGCTCA+TGG | - | chr2_3:22525226-22525245 | None:intergenic | 25.0% |
| !!! | TTTTTAAAACTATGCTTCCT+AGG | + | chr2_3:22525439-22525458 | Msa0284480:intron | 25.0% |
| !!! | TTTTAAAACTATGCTTCCTA+GGG | + | chr2_3:22525440-22525459 | Msa0284480:intron | 25.0% |
| ! | ATGGGTGAAAATATAACTTT+CGG | + | chr2_3:22525470-22525489 | Msa0284480:intron | 25.0% |
| ! | TAATCTGGCATAATACATTT+GGG | - | chr2_3:22525558-22525577 | None:intergenic | 25.0% |
| ! | ATAATCTGGCATAATACATT+TGG | - | chr2_3:22525559-22525578 | None:intergenic | 25.0% |
| !! | TAGCTACATATTATGTTTTC+TGG | + | chr2_3:22525715-22525734 | Msa0284480:CDS | 25.0% |
| !! | AGCTACATATTATGTTTTCT+GGG | + | chr2_3:22525716-22525735 | Msa0284480:CDS | 25.0% |
| !! | ATTTGATGGTATAAAGATGT+TGG | - | chr2_3:22525747-22525766 | None:intergenic | 25.0% |
| ! | TTAGAAATGAGATCATTTGA+TGG | - | chr2_3:22525761-22525780 | None:intergenic | 25.0% |
| !!! | TGTTGACAGTGTTTTATTTC+GGG | - | chr2_3:22520839-22520858 | None:intergenic | 30.0% |
| ! | GTCAAAGTTTTACTTTCGAT+CGG | + | chr2_3:22520866-22520885 | Msa0284480:CDS | 30.0% |
| AACTTTCTTAGTGGTCAATT+TGG | + | chr2_3:22520959-22520978 | Msa0284480:CDS | 30.0% | |
| GTCAAAATCAATACCATCTA+AGG | - | chr2_3:22521002-22521021 | None:intergenic | 30.0% | |
| !!! | GGTATTGATTTTGACATTGA+AGG | + | chr2_3:22521007-22521026 | Msa0284480:CDS | 30.0% |
| !! | ATTGATTTTGACATTGAAGG+AGG | + | chr2_3:22521010-22521029 | Msa0284480:CDS | 30.0% |
| ! | TTTGTTGTCTTAGATTGTCA+AGG | - | chr2_3:22521069-22521088 | None:intergenic | 30.0% |
| ! | ACAATCTAAGACAACAAAAC+AGG | + | chr2_3:22521071-22521090 | Msa0284480:intron | 30.0% |
| !! | TATAGTTTCAAGTTGTACAG+CGG | - | chr2_3:22521155-22521174 | None:intergenic | 30.0% |
| ATCAGGTTCAGAAGAATTAT+TGG | + | chr2_3:22521724-22521743 | Msa0284480:intron | 30.0% | |
| !! | CTTTCTTTGATTTTTCCAAG+AGG | + | chr2_3:22521776-22521795 | Msa0284480:intron | 30.0% |
| !!! | GTTATGTTGTTGTTGTTTTG+TGG | - | chr2_3:22521923-22521942 | None:intergenic | 30.0% |
| TATGCTAACTTGAGTTCTTA+AGG | - | chr2_3:22522191-22522210 | None:intergenic | 30.0% | |
| ! | ACCGGTACACTTTAATTTAA+AGG | - | chr2_3:22522247-22522266 | None:intergenic | 30.0% |
| ! | ACCTTAATTTAAAGGTGTAC+CGG | - | chr2_3:22522265-22522284 | None:intergenic | 30.0% |
| ACCTTTAAATTAAGGTGTAC+CGG | + | chr2_3:22522269-22522288 | Msa0284480:intron | 30.0% | |
| TAATCTGGCATAAAACATTG+GGG | - | chr2_3:22522536-22522555 | None:intergenic | 30.0% | |
| GTAATCTGGCATAAAACATT+GGG | - | chr2_3:22522537-22522556 | None:intergenic | 30.0% | |
| AGTAATCTGGCATAAAACAT+TGG | - | chr2_3:22522538-22522557 | None:intergenic | 30.0% | |
| TTGACAAAGCTATCAAAACT+GGG | + | chr2_3:22522561-22522580 | Msa0284480:CDS | 30.0% | |
| CTACATTGCTCTTAAAATCA+TGG | + | chr2_3:22522654-22522673 | Msa0284480:CDS | 30.0% | |
| TTAGAAATGAGATCATTTGG+TGG | - | chr2_3:22522770-22522789 | None:intergenic | 30.0% | |
| ACCAAATGATCTCATTTCTA+AGG | + | chr2_3:22522769-22522788 | Msa0284480:intron | 30.0% | |
| ACCTTAGAAATGAGATCATT+TGG | - | chr2_3:22522773-22522792 | None:intergenic | 30.0% | |
| ! | ATAGTTGGAAGTTGGTTTAA+TGG | - | chr2_3:22522804-22522823 | None:intergenic | 30.0% |
| ATTAAACCAACTTCCAACTA+TGG | + | chr2_3:22522803-22522822 | Msa0284480:CDS | 30.0% | |
| TGATTACAGCTATCAGATAA+AGG | + | chr2_3:22522868-22522887 | Msa0284480:CDS | 30.0% | |
| !!! | TTTTAAGACACAAGTTTCTG+AGG | + | chr2_3:22522916-22522935 | Msa0284480:CDS | 30.0% |
| TTTCTTAACCATCGTAAAGT+TGG | - | chr2_3:22523064-22523083 | None:intergenic | 30.0% | |
| ! | TGCATGTAGAAAAGGTTTTA+TGG | + | chr2_3:22523610-22523629 | Msa0284480:intron | 30.0% |
| !! | ATGTAGAAAAGGTTTTATGG+CGG | + | chr2_3:22523613-22523632 | Msa0284480:intron | 30.0% |
| !! | TGCTTTCTGAAAGGATATTT+TGG | + | chr2_3:22523665-22523684 | Msa0284480:intron | 30.0% |
| !! | TTTCTGAAAGGATATTTTGG+AGG | + | chr2_3:22523668-22523687 | Msa0284480:intron | 30.0% |
| !! | TTCTGAAAGGATATTTTGGA+GGG | + | chr2_3:22523669-22523688 | Msa0284480:intron | 30.0% |
| CATTGTGGATGTAGAAAATA+GGG | + | chr2_3:22523750-22523769 | Msa0284480:intron | 30.0% | |
| AAAATAGGGATAATTGGAAG+TGG | + | chr2_3:22523764-22523783 | Msa0284480:intron | 30.0% | |
| !!! | CCTAGCATAGTTTTAAAACT+CGG | + | chr2_3:22524625-22524644 | Msa0284480:intron | 30.0% |
| !!! | CGCGCGTTTTTTTTTTTTTT+TGG | - | chr2_3:22525268-22525287 | None:intergenic | 30.0% |
| !!! | GGAAGCATAGTTTTAAAAAC+CGG | - | chr2_3:22525438-22525457 | None:intergenic | 30.0% |
| ! | AAACACTGACTAACAATTAC+AGG | + | chr2_3:22525511-22525530 | Msa0284480:intron | 30.0% |
| CTTGATCATATTGACATGAA+GGG | - | chr2_3:22525644-22525663 | None:intergenic | 30.0% | |
| TACATTGCTCTTTCAATCAT+GGG | + | chr2_3:22525677-22525696 | Msa0284480:CDS | 30.0% | |
| ! | GCTACATATTATGTTTTCTG+GGG | + | chr2_3:22525717-22525736 | Msa0284480:CDS | 30.0% |
| !! | GAAGATGCTTTGATAGTGAA+GGG | - | chr2_3:22520632-22520651 | None:intergenic | 35.0% |
| !! | TGAAGATGCTTTGATAGTGA+AGG | - | chr2_3:22520633-22520652 | None:intergenic | 35.0% |
| ! | ACTATCAAAGCATCTTCAAG+TGG | + | chr2_3:22520635-22520654 | Msa0284480:CDS | 35.0% |
| AGTGTTACATGTTGATGTCA+AGG | - | chr2_3:22520702-22520721 | None:intergenic | 35.0% | |
| TTGACATCAACATGTAACAC+TGG | + | chr2_3:22520701-22520720 | Msa0284480:CDS | 35.0% | |
| ! | TTGGCTTTCCTAAATGTCTT+TGG | + | chr2_3:22520743-22520762 | Msa0284480:CDS | 35.0% |
| ! | AAAGTTTTACTTTCGATCGG+AGG | + | chr2_3:22520869-22520888 | Msa0284480:CDS | 35.0% |
| !!! | GCAACATTTTTAGCATCTTC+TGG | - | chr2_3:22520923-22520942 | None:intergenic | 35.0% |
| CACTAAGAAAGTTAGTATGG+AGG | - | chr2_3:22520952-22520971 | None:intergenic | 35.0% | |
| CTCCATACTAACTTTCTTAG+TGG | + | chr2_3:22520950-22520969 | Msa0284480:CDS | 35.0% | |
| GACCACTAAGAAAGTTAGTA+TGG | - | chr2_3:22520955-22520974 | None:intergenic | 35.0% | |
| ! | AAGGAGGTACAAATCTTTAC+TGG | + | chr2_3:22521026-22521045 | Msa0284480:intron | 35.0% |
| ! | AGGAGGTACAAATCTTTACT+GGG | + | chr2_3:22521027-22521046 | Msa0284480:intron | 35.0% |
| CTTATTCTTTACGCACACAA+AGG | - | chr2_3:22521439-22521458 | None:intergenic | 35.0% | |
| CTTTGTGTGCGTAAAGAATA+AGG | + | chr2_3:22521437-22521456 | Msa0284480:intron | 35.0% | |
| GTTAAATAAAACGTGGTGTC+TGG | - | chr2_3:22521510-22521529 | None:intergenic | 35.0% | |
| TAGGTGATTTAACTACCTCT+TGG | - | chr2_3:22521794-22521813 | None:intergenic | 35.0% | |
| ! | GAATTAGGGTTTAGGGTTTA+GGG | - | chr2_3:22521866-22521885 | None:intergenic | 35.0% |
| ! | TGAATTAGGGTTTAGGGTTT+AGG | - | chr2_3:22521867-22521886 | None:intergenic | 35.0% |
| TAGGTTCCTTAACAAGGTAA+GGG | - | chr2_3:22522063-22522082 | None:intergenic | 35.0% | |
| TTAGGTTCCTTAACAAGGTA+AGG | - | chr2_3:22522064-22522083 | None:intergenic | 35.0% | |
| AGTTCTTAAGGCACATGTTA+AGG | - | chr2_3:22522179-22522198 | None:intergenic | 35.0% | |
| ACCGGTACACCTTTAAATTA+AGG | + | chr2_3:22522261-22522280 | Msa0284480:intron | 35.0% | |
| ACCGGTACACCTTAATTTAA+AGG | - | chr2_3:22522273-22522292 | None:intergenic | 35.0% | |
| GATTTATGAAACAGGTGTAC+CGG | - | chr2_3:22522291-22522310 | None:intergenic | 35.0% | |
| ! | ATCAACCTTTTATCTCTTGC+AGG | + | chr2_3:22522489-22522508 | Msa0284480:intron | 35.0% |
| AAGTACCTGCAAGAGATAAA+AGG | - | chr2_3:22522497-22522516 | None:intergenic | 35.0% | |
| !!! | CAGTTTTGATAGCTTTGTCA+AGG | - | chr2_3:22522562-22522581 | None:intergenic | 35.0% |
| CTTGACAAAGCTATCAAAAC+TGG | + | chr2_3:22522560-22522579 | Msa0284480:CDS | 35.0% | |
| ACCAAATAATACCGTGTTCA+TGG | + | chr2_3:22522700-22522719 | Msa0284480:intron | 35.0% | |
| CCAAATAATACCGTGTTCAT+GGG | + | chr2_3:22522701-22522720 | Msa0284480:intron | 35.0% | |
| ! | TTGGAAGTTGGTTTAATGGA+AGG | - | chr2_3:22522800-22522819 | None:intergenic | 35.0% |
| AAGCATAATTCCTCCATAGT+TGG | - | chr2_3:22522819-22522838 | None:intergenic | 35.0% | |
| ACTATGGAGGAATTATGCTT+TGG | + | chr2_3:22522819-22522838 | Msa0284480:CDS | 35.0% | |
| CTATGGAGGAATTATGCTTT+GGG | + | chr2_3:22522820-22522839 | Msa0284480:CDS | 35.0% | |
| TGGGATAGATTTCATGATGT+TGG | + | chr2_3:22522839-22522858 | Msa0284480:CDS | 35.0% | |
| AAGGTTTACATGAAAACGGA+GGG | - | chr2_3:22523157-22523176 | None:intergenic | 35.0% | |
| ! | TCCGTTTTCATGTAAACCTT+GGG | + | chr2_3:22523157-22523176 | Msa0284480:intron | 35.0% |
| TCCCAAGGTTTACATGAAAA+CGG | - | chr2_3:22523161-22523180 | None:intergenic | 35.0% | |
| GTCTTCTCTTATGTATGTAC+TGG | + | chr2_3:22523189-22523208 | Msa0284480:intron | 35.0% | |
| GATCTGATGAAACATCACTA+CGG | + | chr2_3:22523383-22523402 | Msa0284480:intron | 35.0% | |
| ATCTGATGAAACATCACTAC+GGG | + | chr2_3:22523384-22523403 | Msa0284480:intron | 35.0% | |
| TTAGTGCAACAAAGGAAACA+TGG | + | chr2_3:22523432-22523451 | Msa0284480:intron | 35.0% | |
| TGAGCTAATTAGAAGTAACC+AGG | + | chr2_3:22523511-22523530 | Msa0284480:intron | 35.0% | |
| ATCATCTTCACAATAGAACC+TGG | - | chr2_3:22523532-22523551 | None:intergenic | 35.0% | |
| ! | AAACCTTTTCTACATGCATC+AGG | - | chr2_3:22523608-22523627 | None:intergenic | 35.0% |
| !! | TGTAGAAAAGGTTTTATGGC+GGG | + | chr2_3:22523614-22523633 | Msa0284480:intron | 35.0% |
| TTAGATGGATGCTTTCTGAA+AGG | + | chr2_3:22523656-22523675 | Msa0284480:intron | 35.0% | |
| ! | CCTATTTTCTACATCCACAA+TGG | - | chr2_3:22523752-22523771 | None:intergenic | 35.0% |
| CCATTGTGGATGTAGAAAAT+AGG | + | chr2_3:22523749-22523768 | Msa0284480:intron | 35.0% | |
| ! | GTTTTTGACACTATTGCATC+AGG | + | chr2_3:22523786-22523805 | Msa0284480:intron | 35.0% |
| !!! | CCGAGTTTTAAAACTATGCT+AGG | - | chr2_3:22524628-22524647 | None:intergenic | 35.0% |
| !!! | CATAGTTTTAAAACTCGGAC+CGG | + | chr2_3:22524630-22524649 | Msa0284480:intron | 35.0% |
| TTTAATCCGATTCAGTCATG+CGG | - | chr2_3:22524721-22524740 | None:intergenic | 35.0% | |
| ATGACTGAATCGGATTAAAC+CGG | + | chr2_3:22524722-22524741 | Msa0284480:intron | 35.0% | |
| !!! | CATAGTTTTAAAAACCGGCT+CGG | - | chr2_3:22525433-22525452 | None:intergenic | 35.0% |
| !! | CAATTTTGATAGCTGTGTCA+AGG | - | chr2_3:22525584-22525603 | None:intergenic | 35.0% |
| CTTGACACAGCTATCAAAAT+TGG | + | chr2_3:22525582-22525601 | Msa0284480:CDS | 35.0% | |
| GCTTGATCATATTGACATGA+AGG | - | chr2_3:22525645-22525664 | None:intergenic | 35.0% | |
| CTACATTGCTCTTTCAATCA+TGG | + | chr2_3:22525676-22525695 | Msa0284480:CDS | 35.0% | |
| !! | TGACAAGTTTTGTCAATGTG+AGG | - | chr2_3:22525791-22525810 | None:intergenic | 35.0% |
| TCATAAATCCTCCACACTTA+CGG | - | chr2_3:22525817-22525836 | None:intergenic | 35.0% | |
| ! | ATCAAAGCATCTTCAAGTGG+TGG | + | chr2_3:22520638-22520657 | Msa0284480:CDS | 40.0% |
| GCTTTCCTAAATGTCTTTGG+AGG | + | chr2_3:22520746-22520765 | Msa0284480:CDS | 40.0% | |
| ! | TTCCTAAATGTCTTTGGAGG+AGG | + | chr2_3:22520749-22520768 | Msa0284480:CDS | 40.0% |
| TTCCTCCTCCAAAGACATTT+AGG | - | chr2_3:22520754-22520773 | None:intergenic | 40.0% | |
| ! | TCTAAGGTAACACTTCCAAG+TGG | - | chr2_3:22520986-22521005 | None:intergenic | 40.0% |
| !! | CTTGGAAGTGTTACCTTAGA+TGG | + | chr2_3:22520986-22521005 | Msa0284480:CDS | 40.0% |
| GCGTAAAGAATAAGGTTGCT+TGG | + | chr2_3:22521445-22521464 | Msa0284480:intron | 40.0% | |
| AGACCAAAGAAACTGGCATA+TGG | + | chr2_3:22521469-22521488 | Msa0284480:intron | 40.0% | |
| AAGCCATATGCCAGTTTCTT+TGG | - | chr2_3:22521475-22521494 | None:intergenic | 40.0% | |
| AAAGAAACTGGCATATGGCT+TGG | + | chr2_3:22521474-22521493 | Msa0284480:intron | 40.0% | |
| AAGAAACTGGCATATGGCTT+GGG | + | chr2_3:22521475-22521494 | Msa0284480:intron | 40.0% | |
| !!! | CGCGCTTTTTTGAAAAGATC+AGG | + | chr2_3:22521707-22521726 | Msa0284480:intron | 40.0% |
| TTCCTTAACAAGGTAAGGGT+GGG | - | chr2_3:22522059-22522078 | None:intergenic | 40.0% | |
| ! | CCACTTTAGGTTCCTTAACA+AGG | - | chr2_3:22522069-22522088 | None:intergenic | 40.0% |
| CCTTGTTAAGGAACCTAAAG+TGG | + | chr2_3:22522066-22522085 | Msa0284480:intron | 40.0% | |
| ! | CAGGTACTTTTACTTGTCTG+CGG | + | chr2_3:22522508-22522527 | Msa0284480:intron | 40.0% |
| GCTTTGTCAAGGTAGTAATC+TGG | - | chr2_3:22522551-22522570 | None:intergenic | 40.0% | |
| CCCATGAACACGGTATTATT+TGG | - | chr2_3:22522704-22522723 | None:intergenic | 40.0% | |
| AAACCAACTTCCAACTATGG+AGG | + | chr2_3:22522806-22522825 | Msa0284480:CDS | 40.0% | |
| ATTCCTCCATAGTTGGAAGT+TGG | - | chr2_3:22522812-22522831 | None:intergenic | 40.0% | |
| CAAGGTTTACATGAAAACGG+AGG | - | chr2_3:22523158-22523177 | None:intergenic | 40.0% | |
| ! | CTCCGTTTTCATGTAAACCT+TGG | + | chr2_3:22523156-22523175 | Msa0284480:intron | 40.0% |
| TCTGATGAAACATCACTACG+GGG | + | chr2_3:22523385-22523404 | Msa0284480:intron | 40.0% | |
| AACAAAGGAAACATGGCAGT+TGG | + | chr2_3:22523439-22523458 | Msa0284480:intron | 40.0% | |
| AGTTGGTTGAAGGTAGTGAA+AGG | + | chr2_3:22523456-22523475 | Msa0284480:intron | 40.0% | |
| GTTGGTTGAAGGTAGTGAAA+GGG | + | chr2_3:22523457-22523476 | Msa0284480:intron | 40.0% | |
| TGGCGACTATGGAATTTGTA+TGG | - | chr2_3:22523558-22523577 | None:intergenic | 40.0% | |
| !!! | TTGAATTTTGGTGGCGACTA+TGG | - | chr2_3:22523569-22523588 | None:intergenic | 40.0% |
| TGTCCTGATGCATGTAGAAA+AGG | + | chr2_3:22523602-22523621 | Msa0284480:intron | 40.0% | |
| !! | AGGTCGTTGATTGGTTTAGA+TGG | + | chr2_3:22523641-22523660 | Msa0284480:intron | 40.0% |
| AGGGAAACTATTGTCTGTTG+TGG | + | chr2_3:22523688-22523707 | Msa0284480:intron | 40.0% | |
| TGTCATTGCTTATGCCATTG+TGG | + | chr2_3:22523735-22523754 | Msa0284480:intron | 40.0% | |
| ATCGAAGAACCTGTTACCTA+TGG | - | chr2_3:22525153-22525172 | None:intergenic | 40.0% | |
| GCTGTGTCAAGGTAATAATC+TGG | - | chr2_3:22525573-22525592 | None:intergenic | 40.0% | |
| TCTTTCAATCATGGGATGCT+TGG | + | chr2_3:22525685-22525704 | Msa0284480:CDS | 40.0% | |
| CATAAATCCTCCACACTTAC+GGG | - | chr2_3:22525816-22525835 | None:intergenic | 40.0% | |
| GACCTGCAAAGTTCCAACTT+GGG | - | chr2_3:22520781-22520800 | None:intergenic | 45.0% | |
| TGACCTGCAAAGTTCCAACT+TGG | - | chr2_3:22520782-22520801 | None:intergenic | 45.0% | |
| TGGAACTTTGCAGGTCATTG+TGG | + | chr2_3:22520785-22520804 | Msa0284480:intron | 45.0% | |
| !! | CGGGTTCGAGTTTTGTACAA+GGG | - | chr2_3:22520820-22520839 | None:intergenic | 45.0% |
| !! | TCGGGTTCGAGTTTTGTACA+AGG | - | chr2_3:22520821-22520840 | None:intergenic | 45.0% |
| AGTGGTCAATTTGGTCCACT+TGG | + | chr2_3:22520968-22520987 | Msa0284480:CDS | 45.0% | |
| TTTACTGGGATGACCTTGCT+AGG | + | chr2_3:22521041-22521060 | Msa0284480:intron | 45.0% | |
| TTACTGGGATGACCTTGCTA+GGG | + | chr2_3:22521042-22521061 | Msa0284480:intron | 45.0% | |
| GCTTGGTAGACCAAAGAAAC+TGG | + | chr2_3:22521462-22521481 | Msa0284480:intron | 45.0% | |
| ! | AAAACGTGGTGTCTGGTCTT+TGG | - | chr2_3:22521503-22521522 | None:intergenic | 45.0% |
| GTTCCTTAACAAGGTAAGGG+TGG | - | chr2_3:22522060-22522079 | None:intergenic | 45.0% | |
| GGTGGTATATAACCACCACT+AGG | - | chr2_3:22522752-22522771 | None:intergenic | 45.0% | |
| !! | CAAGTTTCTGAGGCAATAGC+TGG | + | chr2_3:22522926-22522945 | Msa0284480:CDS | 45.0% |
| ! | CATCGTAAAGTTGGTCGTAC+AGG | - | chr2_3:22523055-22523074 | None:intergenic | 45.0% |
| CTGTACGACCAACTTTACGA+TGG | + | chr2_3:22523053-22523072 | Msa0284480:intron | 45.0% | |
| GAGGGAATCAAAGCGTAACT+AGG | - | chr2_3:22523139-22523158 | None:intergenic | 45.0% | |
| AGAAGACGCTTTGATTCCCA+AGG | - | chr2_3:22523176-22523195 | None:intergenic | 45.0% | |
| CACTACGGGGTTATACTTGA+TGG | + | chr2_3:22523398-22523417 | Msa0284480:intron | 45.0% | |
| GAAACATGGCAGTTGGTTGA+AGG | + | chr2_3:22523446-22523465 | Msa0284480:intron | 45.0% | |
| GGTAGTGAAAGGGAGTAGTA+TGG | + | chr2_3:22523467-22523486 | Msa0284480:intron | 45.0% | |
| !! | AAGGTTTTATGGCGGGATGT+AGG | + | chr2_3:22523621-22523640 | Msa0284480:intron | 45.0% |
| ACACTATTGCATCAGGAGCT+AGG | + | chr2_3:22523793-22523812 | Msa0284480:intron | 45.0% | |
| AAAATTTGCACCCCTGACCT+AGG | + | chr2_3:22524257-22524276 | Msa0284480:intron | 45.0% | |
| AAATTTGCACCCCTGACCTA+GGG | + | chr2_3:22524258-22524277 | Msa0284480:intron | 45.0% | |
| TGTCAAGATGCCTAACACAG+TGG | - | chr2_3:22524295-22524314 | None:intergenic | 45.0% | |
| GTTGAACCGCATGACTGAAT+CGG | + | chr2_3:22524712-22524731 | Msa0284480:intron | 45.0% | |
| TCGGATTAAACCGGATGACT+CGG | + | chr2_3:22524731-22524750 | Msa0284480:intron | 45.0% | |
| AGTCATACAACCGAGTCATC+CGG | - | chr2_3:22524744-22524763 | None:intergenic | 45.0% | |
| !! | GATGACTCGGTTGTATGACT+CGG | + | chr2_3:22524744-22524763 | Msa0284480:intron | 45.0% |
| AAGGATGCTATTCAACCGCT+GGG | - | chr2_3:22525124-22525143 | None:intergenic | 45.0% | |
| !! | TTTGACCTGGTTTTCCGTAC+CGG | + | chr2_3:22525295-22525314 | Msa0284480:intron | 45.0% |
| !! | ATGGTGCCATGTCATCAAAC+CGG | - | chr2_3:22525329-22525348 | None:intergenic | 45.0% |
| ATGGCACCATGTCAATTGCA+TGG | + | chr2_3:22525339-22525358 | Msa0284480:intron | 45.0% | |
| TGGCACCATGTCAATTGCAT+GGG | + | chr2_3:22525340-22525359 | Msa0284480:intron | 45.0% | |
| TGCATGGGCGATCCAATAAT+TGG | + | chr2_3:22525355-22525374 | Msa0284480:intron | 45.0% | |
| !! | GACTGGTTCGAGCCAATTAT+TGG | - | chr2_3:22525370-22525389 | None:intergenic | 45.0% |
| !!! | TTTTAAAAACCGGCTCGGAC+CGG | - | chr2_3:22525428-22525447 | None:intergenic | 45.0% |
| TGCTTCCTAGGGCTATATCA+TGG | + | chr2_3:22525451-22525470 | Msa0284480:intron | 45.0% | |
| GCTTCCTAGGGCTATATCAT+GGG | + | chr2_3:22525452-22525471 | Msa0284480:intron | 45.0% | |
| TTCACCCATGATATAGCCCT+AGG | - | chr2_3:22525459-22525478 | None:intergenic | 45.0% | |
| ACTTGTCATACCCGTAAGTG+TGG | + | chr2_3:22525803-22525822 | Msa0284480:CDS | 45.0% | |
| !!! | AATATCTTTTTTATAAAATT+GGG | - | chr2_3:22521250-22521269 | None:intergenic | 5.0% |
| !!! | AAATATCTTTTTTATAAAAT+TGG | - | chr2_3:22521251-22521270 | None:intergenic | 5.0% |
| !!! | AAAACATTTAATATTTTTAT+TGG | + | chr2_3:22523926-22523945 | Msa0284480:intron | 5.0% |
| !!! | AAACATTTAATATTTTTATT+GGG | + | chr2_3:22523927-22523946 | Msa0284480:intron | 5.0% |
| !! | ATTTATTATATTTATAGTTA+TGG | - | chr2_3:22524820-22524839 | None:intergenic | 5.0% |
| !!! | AATGTTTTATTTTTAATATT+AGG | - | chr2_3:22524962-22524981 | None:intergenic | 5.0% |
| TGGTGGCATTGCCATCTACT+GGG | + | chr2_3:22520655-22520674 | Msa0284480:CDS | 50.0% | |
| !! | TAGGTTTTGGCCCCAGTAGA+TGG | - | chr2_3:22520669-22520688 | None:intergenic | 50.0% |
| ATCTACTGGGGCCAAAACCT+AGG | + | chr2_3:22520668-22520687 | Msa0284480:CDS | 50.0% | |
| !! | AGGTGCCATCTCCTAGGTTT+TGG | - | chr2_3:22520682-22520701 | None:intergenic | 50.0% |
| ! | ATGTCAAGGTGCCATCTCCT+AGG | - | chr2_3:22520688-22520707 | None:intergenic | 50.0% |
| ! | GACCCAAGTTGGAACTTTGC+AGG | + | chr2_3:22520776-22520795 | Msa0284480:intron | 50.0% |
| TTGCAGGTCATTGTGGTGAC+TGG | + | chr2_3:22520792-22520811 | Msa0284480:intron | 50.0% | |
| ! | CTTTCGATCGGAGGTGCAAT+AGG | + | chr2_3:22520878-22520897 | Msa0284480:CDS | 50.0% |
| ! | TTCTGGTGAGCTGAGAGTGT+AGG | - | chr2_3:22520906-22520925 | None:intergenic | 50.0% |
| GATTGTCAAGGTCCCTAGCA+AGG | - | chr2_3:22521057-22521076 | None:intergenic | 50.0% | |
| GGCACGTGCAACACAGATTT+GGG | - | chr2_3:22521418-22521437 | None:intergenic | 50.0% | |
| AGGCACGTGCAACACAGATT+TGG | - | chr2_3:22521419-22521438 | None:intergenic | 50.0% | |
| GTCCCACCCTTACCTTGTTA+AGG | + | chr2_3:22522054-22522073 | Msa0284480:intron | 50.0% | |
| TGCTGGTAGTCCCATGAACA+CGG | - | chr2_3:22522714-22522733 | None:intergenic | 50.0% | |
| ATATCCAGGACCCTAGGTCA+GGG | - | chr2_3:22524271-22524290 | None:intergenic | 50.0% | |
| CCTAACACAGTGGCATATCC+AGG | - | chr2_3:22524285-22524304 | None:intergenic | 50.0% | |
| CCTGGATATGCCACTGTGTT+AGG | + | chr2_3:22524282-22524301 | Msa0284480:intron | 50.0% | |
| TGGTCGAACCACTAGATCAC+TGG | + | chr2_3:22524690-22524709 | Msa0284480:intron | 50.0% | |
| CGGTTCAACCAGTGATCTAG+TGG | - | chr2_3:22524701-22524720 | None:intergenic | 50.0% | |
| AATAGCTATCAGTGGCCCAG+CGG | + | chr2_3:22525106-22525125 | Msa0284480:intron | 50.0% | |
| CAAGGATGCTATTCAACCGC+TGG | - | chr2_3:22525125-22525144 | None:intergenic | 50.0% | |
| TAGCATCCTTGTGCTGCCAT+AGG | + | chr2_3:22525134-22525153 | Msa0284480:intron | 50.0% | |
| CTGTTACCTATGGCAGCACA+AGG | - | chr2_3:22525143-22525162 | None:intergenic | 50.0% | |
| CTTGTGCTGCCATAGGTAAC+AGG | + | chr2_3:22525141-22525160 | Msa0284480:intron | 50.0% | |
| ATATGGCTCATGGCTCACAC+AGG | - | chr2_3:22525177-22525196 | None:intergenic | 50.0% | |
| GGTACGGAAAACCAGGTCAA+AGG | - | chr2_3:22525296-22525315 | None:intergenic | 50.0% | |
| CATCAAACCGGTTGTCGAAC+CGG | - | chr2_3:22525317-22525336 | None:intergenic | 50.0% | |
| !! | CGACAACCGGTTTGATGACA+TGG | + | chr2_3:22525320-22525339 | Msa0284480:intron | 50.0% |
| GATCGCCCATGCAATTGACA+TGG | - | chr2_3:22525348-22525367 | None:intergenic | 50.0% | |
| TGTCATACCCGTAAGTGTGG+AGG | + | chr2_3:22525806-22525825 | Msa0284480:CDS | 50.0% | |
| GTGGTGGCATTGCCATCTAC+TGG | + | chr2_3:22520654-22520673 | Msa0284480:CDS | 55.0% | |
| GGTGGCATTGCCATCTACTG+GGG | + | chr2_3:22520656-22520675 | Msa0284480:CDS | 55.0% | |
| TGGGGCCAAAACCTAGGAGA+TGG | + | chr2_3:22520674-22520693 | Msa0284480:CDS | 55.0% | |
| GAGGAGGAAGAGACCCAAGT+TGG | + | chr2_3:22520765-22520784 | Msa0284480:intron | 55.0% | |
| GCACCTAATGCAGCTCCTAG+TGG | + | chr2_3:22522734-22522753 | Msa0284480:intron | 55.0% | |
| CCACCACTAGGAGCTGCATT+AGG | - | chr2_3:22522740-22522759 | None:intergenic | 55.0% | |
| CCTAATGCAGCTCCTAGTGG+TGG | + | chr2_3:22522737-22522756 | Msa0284480:intron | 55.0% | |
| GCGGGATGTAGGTCGTTGAT+TGG | + | chr2_3:22523632-22523651 | Msa0284480:intron | 55.0% | |
| TATCCAGGACCCTAGGTCAG+GGG | - | chr2_3:22524270-22524289 | None:intergenic | 55.0% | |
| CATATCCAGGACCCTAGGTC+AGG | - | chr2_3:22524272-22524291 | None:intergenic | 55.0% | |
| AGTGGCATATCCAGGACCCT+AGG | - | chr2_3:22524277-22524296 | None:intergenic | 55.0% | |
| !! | CCATTGACTCAGTGACCCAG+TGG | - | chr2_3:22524673-22524692 | None:intergenic | 55.0% |
| CCACTGGGTCACTGAGTCAA+TGG | + | chr2_3:22524670-22524689 | Msa0284480:intron | 55.0% | |
| TCGAACCGGTACGGAAAACC+AGG | - | chr2_3:22525303-22525322 | None:intergenic | 55.0% | |
| !! | TTCCGTACCGGTTCGACAAC+CGG | + | chr2_3:22525307-22525326 | Msa0284480:intron | 55.0% |
| AACCGGTTGTCGAACCGGTA+CGG | - | chr2_3:22525312-22525331 | None:intergenic | 55.0% | |
| GCTCGAACCAGTCATGTGTC+CGG | + | chr2_3:22525377-22525396 | Msa0284480:intron | 55.0% | |
| CCAGTCATGTGTCCGGTTCA+CGG | + | chr2_3:22525384-22525403 | Msa0284480:intron | 55.0% | |
| TCATGTGTCCGGTTCACGGT+CGG | + | chr2_3:22525388-22525407 | Msa0284480:intron | 55.0% | |
| ! | GGAGCTGCATTAGGTGCTGC+TGG | - | chr2_3:22522731-22522750 | None:intergenic | 60.0% |
| ! | ACTCGGACCGGTCATCGACT+CGG | + | chr2_3:22524642-22524661 | Msa0284480:intron | 60.0% |
| !! | ATCGACTCGGCAAGGCCACT+GGG | + | chr2_3:22524655-22524674 | Msa0284480:intron | 60.0% |
| CGCGCGTTTGACCTTTGACC+TGG | + | chr2_3:22525282-22525301 | Msa0284480:intron | 60.0% | |
| CCGTGAACCGGACACATGAC+TGG | - | chr2_3:22525387-22525406 | None:intergenic | 60.0% | |
| !! | GACCGGTCATCGACTCGGCA+AGG | + | chr2_3:22524647-22524666 | Msa0284480:intron | 65.0% |
| GGCCTTGCCGAGTCGATGAC+CGG | - | chr2_3:22524652-22524671 | None:intergenic | 65.0% | |
| !! | CATCGACTCGGCAAGGCCAC+TGG | + | chr2_3:22524654-22524673 | Msa0284480:intron | 65.0% |
| TGTCCGGTTCACGGTCGGAC+CGG | + | chr2_3:22525393-22525412 | Msa0284480:intron | 65.0% | |
| CAACCGGTCCGACCGTGAAC+CGG | - | chr2_3:22525399-22525418 | None:intergenic | 65.0% | |
| CACGGTCGGACCGGTTGAAC+CGG | + | chr2_3:22525402-22525421 | Msa0284480:intron | 65.0% | |
| !! | AAAAACCGGCTCGGACCGGC+CGG | - | chr2_3:22525424-22525443 | None:intergenic | 65.0% |
| GCACCCCTGACCTAGGGTCC+TGG | + | chr2_3:22524264-22524283 | Msa0284480:intron | 70.0% | |
| GTCGGACCGGTTGAACCGGC+CGG | + | chr2_3:22525406-22525425 | Msa0284480:intron | 70.0% | |
| ! | CTCGGACCGGCCGGTTCAAC+CGG | - | chr2_3:22525415-22525434 | None:intergenic | 70.0% |
| TTGAACCGGCCGGTCCGAGC+CGG | + | chr2_3:22525416-22525435 | Msa0284480:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 22520578 | 22525836 | 22520578 | ID=Msa0284480;Name=Msa0284480 |
| chr2_3 | mRNA | 22520578 | 22525836 | 22520578 | ID=Msa0284480-mRNA-1;Parent=Msa0284480;Name=Msa0284480-mRNA-1;_AED=0.13;_eAED=0.15;_QI=0|0|0|1|0|0|5|0|362 |
| chr2_3 | exon | 22520578 | 22520782 | 22520578 | ID=Msa0284480-mRNA-1:exon:8796;Parent=Msa0284480-mRNA-1 |
| chr2_3 | exon | 22520798 | 22521031 | 22520798 | ID=Msa0284480-mRNA-1:exon:8797;Parent=Msa0284480-mRNA-1 |
| chr2_3 | exon | 22522552 | 22522712 | 22522552 | ID=Msa0284480-mRNA-1:exon:8798;Parent=Msa0284480-mRNA-1 |
| chr2_3 | exon | 22522791 | 22522975 | 22522791 | ID=Msa0284480-mRNA-1:exon:8799;Parent=Msa0284480-mRNA-1 |
| chr2_3 | exon | 22525533 | 22525836 | 22525533 | ID=Msa0284480-mRNA-1:exon:8800;Parent=Msa0284480-mRNA-1 |
| chr2_3 | CDS | 22520578 | 22520782 | 22520578 | ID=Msa0284480-mRNA-1:cds;Parent=Msa0284480-mRNA-1 |
| chr2_3 | CDS | 22520798 | 22521031 | 22520798 | ID=Msa0284480-mRNA-1:cds;Parent=Msa0284480-mRNA-1 |
| chr2_3 | CDS | 22522552 | 22522712 | 22522552 | ID=Msa0284480-mRNA-1:cds;Parent=Msa0284480-mRNA-1 |
| chr2_3 | CDS | 22522791 | 22522975 | 22522791 | ID=Msa0284480-mRNA-1:cds;Parent=Msa0284480-mRNA-1 |
| chr2_3 | CDS | 22525533 | 22525836 | 22525533 | ID=Msa0284480-mRNA-1:cds;Parent=Msa0284480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
