Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223570 | XP_003597479.1 | 96.910 | 356 | 5 | 1 | 1 | 350 | 1 | 356 | 0.0 | 702 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223570 | sp|Q04869|YM94_YEAST | 27.138 | 269 | 182 | 7 | 1 | 263 | 1 | 261 | 2.66e-18 | 88.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223570 | G7IHQ8 | 96.910 | 356 | 5 | 1 | 1 | 350 | 1 | 356 | 0.0 | 702 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0181610 | Msa0223570 | 0.810457 | 1.141938e-50 | -8.615850e-47 |
| Msa0223570 | Msa0264870 | 0.872135 | 4.013087e-67 | -8.615850e-47 |
| Msa0223570 | Msa0340290 | 0.909476 | 5.463749e-82 | -8.615850e-47 |
| Msa0223570 | Msa0434920 | 0.823668 | 1.223623e-53 | -8.615850e-47 |
| Msa0223570 | Msa0478870 | 0.806524 | 7.887920e-50 | -8.615850e-47 |
| Msa0223570 | Msa0620990 | 0.821624 | 3.656957e-53 | -8.615850e-47 |
| Msa0223570 | Msa0709780 | 0.822635 | 2.132064e-53 | -8.615850e-47 |
| Msa0223570 | Msa0828300 | 0.930441 | 1.629614e-93 | -8.615850e-47 |
| Msa0223570 | Msa0930780 | 0.813199 | 2.888645e-51 | -8.615850e-47 |
| Msa0223570 | Msa1252190 | 0.813799 | 2.131965e-51 | -8.615850e-47 |
| Msa0223570 | Msa1459380 | 0.807760 | 4.318361e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223570 | MtrunA17_Chr2g0329171 | 96.910 | 356 | 5 | 1 | 1 | 350 | 1 | 356 | 0.0 | 702 |
| Msa0223570 | MtrunA17_Chr8g0342101 | 95.789 | 95 | 4 | 0 | 256 | 350 | 1 | 95 | 5.44e-60 | 188 |
| Msa0223570 | MtrunA17_Chr8g0342111 | 96.429 | 28 | 1 | 0 | 154 | 181 | 1 | 28 | 1.80e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223570 | AT3G20790.1 | 68.466 | 352 | 99 | 4 | 6 | 350 | 9 | 355 | 3.50e-171 | 480 |
Find 91 sgRNAs with CRISPR-Local
Find 357 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCTCACTCAAATTGTTAA+AGG | 0.165991 | 2_1:-73158993 | Msa0223570:CDS |
| GGGAGGTTTCATTCTTGATA+TGG | 0.259648 | 2_1:-73156943 | Msa0223570:CDS |
| AACCGCTGTTCTTGTCGTTT+TGG | 0.265232 | 2_1:-73160303 | Msa0223570:CDS |
| TACTCCACTGAAAGGGAAAA+AGG | 0.284785 | 2_1:+73155729 | None:intergenic |
| CCAATACAGATCGCGATTCT+AGG | 0.299863 | 2_1:-73160524 | Msa0223570:CDS |
| GGAAATGTGGAATCTAAATT+TGG | 0.301322 | 2_1:-73160365 | Msa0223570:CDS |
| ATGCTCCTGGGCAAATAATT+TGG | 0.322118 | 2_1:-73157643 | Msa0223570:CDS |
| ATGTGATTGGATGAAGTTAT+AGG | 0.324732 | 2_1:-73155133 | Msa0223570:three_prime_UTR |
| TGCATTTCATTGCAGGGTTA+AGG | 0.331258 | 2_1:-73156917 | Msa0223570:CDS |
| AATGTTTATCCTCAGTCATT+TGG | 0.334582 | 2_1:-73156195 | Msa0223570:intron |
| CCAAAAGAAAATGCTAATCT+TGG | 0.359744 | 2_1:-73154910 | Msa0223570:three_prime_UTR |
| TCAGTAAGCTAGTACAGAAT+TGG | 0.359875 | 2_1:-73160584 | Msa0223570:five_prime_UTR |
| ACCACATGCCTTGGGTGATC+TGG | 0.360498 | 2_1:+73156133 | None:intergenic |
| ATGGGTGTGCATTTCATTGC+AGG | 0.364601 | 2_1:-73156924 | Msa0223570:CDS |
| AACGACAAGAACAGCGGTTA+TGG | 0.368079 | 2_1:+73160307 | None:intergenic |
| TGTTGATACAGGGACAAATT+AGG | 0.370200 | 2_1:-73154981 | Msa0223570:three_prime_UTR |
| TCGATTTCTGCTGATGCTCC+TGG | 0.371960 | 2_1:-73157656 | Msa0223570:CDS |
| CAAGAATCTAATTACCTTGA+GGG | 0.378715 | 2_1:+73155663 | None:intergenic |
| TTAGAGGCAATGCTTGAGTC+TGG | 0.383664 | 2_1:-73155334 | Msa0223570:CDS |
| AAGACAGATGATATATTATC+TGG | 0.394396 | 2_1:+73156283 | None:intergenic |
| CCTAGAATCGCGATCTGTAT+TGG | 0.394617 | 2_1:+73160524 | None:intergenic |
| TGAACTTTGTTTATTTCAAT+CGG | 0.400096 | 2_1:-73154859 | Msa0223570:three_prime_UTR |
| GGAGGTTTCATTCTTGATAT+GGG | 0.408876 | 2_1:-73156942 | Msa0223570:CDS |
| TGCAACAATCATTACCTTGA+AGG | 0.412787 | 2_1:+73158957 | None:intergenic |
| TCCCATGCATCTGTTGATAC+AGG | 0.428646 | 2_1:-73154992 | Msa0223570:three_prime_UTR |
| TGGCGAGTCGTTGGCATGAA+TGG | 0.428674 | 2_1:-73155986 | Msa0223570:CDS |
| ATCCTCAGTCATTTGGAGAA+TGG | 0.439451 | 2_1:-73156188 | Msa0223570:intron |
| ATCTTGAGTTCGACTCCAAA+TGG | 0.442333 | 2_1:+73160430 | None:intergenic |
| GCTGGTAAACATGTCCTTCA+AGG | 0.444302 | 2_1:-73158971 | Msa0223570:intron |
| CCAGGTAACCATGTTGTCCT+TGG | 0.464149 | 2_1:+73155939 | None:intergenic |
| GAATTGGATTGGATCGAAAT+CGG | 0.464538 | 2_1:-73160568 | Msa0223570:five_prime_UTR |
| AGCAGGGAGATCAATGTGAT+TGG | 0.472108 | 2_1:-73155146 | Msa0223570:three_prime_UTR |
| ACAAAAGAGAGGCGATGCTC+AGG | 0.477335 | 2_1:+73155382 | None:intergenic |
| AAGAAACTAATTGCTGACCT+TGG | 0.488102 | 2_1:-73157507 | Msa0223570:CDS |
| CAAAAGAAAATGCTAATCTT+GGG | 0.491327 | 2_1:-73154909 | Msa0223570:three_prime_UTR |
| TGTGAGATCTCCGAGAGTCT+TGG | 0.491599 | 2_1:+73160470 | None:intergenic |
| CAGACTTGTTCATCTTCACT+TGG | 0.494535 | 2_1:+73155176 | None:intergenic |
| AGAAACTAATTGCTGACCTT+GGG | 0.508482 | 2_1:-73157506 | Msa0223570:CDS |
| AGAAACAAATACCTCAACTA+AGG | 0.508827 | 2_1:+73157589 | None:intergenic |
| TCAAGTACTCAAAGCGTGTC+AGG | 0.509788 | 2_1:+73154829 | None:intergenic |
| TCACTCAAATTGTTAAAGGC+TGG | 0.510501 | 2_1:-73158989 | Msa0223570:CDS |
| CCAAGGACAACATGGTTACC+TGG | 0.511081 | 2_1:-73155939 | Msa0223570:intron |
| GCTTGAGTCTGGATCAAAGC+AGG | 0.513242 | 2_1:-73155323 | Msa0223570:CDS |
| AACAAGTCTGTGGATCAAGC+AGG | 0.514000 | 2_1:-73155163 | Msa0223570:three_prime_UTR |
| TATATTATCTGGCGGTGGTA+AGG | 0.516675 | 2_1:+73156294 | None:intergenic |
| TCCCTGTATCAACAGATGCA+TGG | 0.516967 | 2_1:+73154990 | None:intergenic |
| GGAATCCACGCTCAATCTGA+AGG | 0.518597 | 2_1:+73155960 | None:intergenic |
| AAGCTAGTACAGAATTGGAT+TGG | 0.520878 | 2_1:-73160579 | Msa0223570:five_prime_UTR |
| TACTGCAGGTATAACTGAGC+TGG | 0.521091 | 2_1:-73157702 | Msa0223570:intron |
| AGTGTGCAAGTTATTATAGA+AGG | 0.522861 | 2_1:-73157474 | Msa0223570:CDS |
| CATTTATTGAAATTTATGAC+TGG | 0.523498 | 2_1:-73155101 | Msa0223570:three_prime_UTR |
| CCCTGTATCAACAGATGCAT+GGG | 0.523743 | 2_1:+73154991 | None:intergenic |
| GAATCTAAATTTGGAGATAA+CGG | 0.525100 | 2_1:-73160356 | Msa0223570:CDS |
| ATTTCATTATATGATGCTCA+TGG | 0.528500 | 2_1:-73155766 | Msa0223570:CDS |
| CGATTTCTGCTGATGCTCCT+GGG | 0.530286 | 2_1:-73157655 | Msa0223570:CDS |
| CAGATTGAGCGTGGATTCCA+AGG | 0.533748 | 2_1:-73155956 | Msa0223570:CDS |
| CTTCAGTTACTCCACTGAAA+GGG | 0.534240 | 2_1:+73155722 | None:intergenic |
| TAGATCTTGTGGCGAGTCGT+TGG | 0.542383 | 2_1:-73155995 | Msa0223570:CDS |
| TCATTTGGAGAATGGATGCT+CGG | 0.542787 | 2_1:-73156180 | Msa0223570:CDS |
| TCTTCAGTTACTCCACTGAA+AGG | 0.550039 | 2_1:+73155721 | None:intergenic |
| TGAACACATTATAGATCTTG+TGG | 0.550569 | 2_1:-73156006 | Msa0223570:intron |
| ACAAATACCTCAACTAAGGC+AGG | 0.553907 | 2_1:+73157593 | None:intergenic |
| CCCATGCATCTGTTGATACA+GGG | 0.555572 | 2_1:-73154991 | Msa0223570:three_prime_UTR |
| ACAGACCAAATTATTTGCCC+AGG | 0.558393 | 2_1:+73157638 | None:intergenic |
| CATTTGGAGAATGGATGCTC+GGG | 0.559246 | 2_1:-73156179 | Msa0223570:CDS |
| CGTGGATTCCAAGGACAACA+TGG | 0.570880 | 2_1:-73155947 | Msa0223570:CDS |
| TGGGTGTGCATTTCATTGCA+GGG | 0.573946 | 2_1:-73156923 | Msa0223570:CDS |
| TTTCATTGCAGGGTTAAGGA+TGG | 0.576994 | 2_1:-73156913 | Msa0223570:intron |
| TCAATACCTTCCAAGACTCT+CGG | 0.581013 | 2_1:-73160480 | Msa0223570:CDS |
| CAGATCGCGATTCTAGGAGC+AGG | 0.582695 | 2_1:-73160518 | Msa0223570:CDS |
| TTCAGCTATGACATCTCATG+TGG | 0.585284 | 2_1:-73156323 | Msa0223570:CDS |
| GATGATATATTATCTGGCGG+TGG | 0.593534 | 2_1:+73156289 | None:intergenic |
| ACATGCCTTGGGTGATCTGG+AGG | 0.596307 | 2_1:+73156136 | None:intergenic |
| GGAACCCTTCAGATTGAGCG+TGG | 0.602295 | 2_1:-73155965 | Msa0223570:CDS |
| GAATCCACGCTCAATCTGAA+GGG | 0.610146 | 2_1:+73155961 | None:intergenic |
| TCGACAGCTTGTTGGATGTG+AGG | 0.615898 | 2_1:-73156356 | Msa0223570:intron |
| CTGAAACTTCTAATATCTCG+AGG | 0.616297 | 2_1:-73155059 | Msa0223570:three_prime_UTR |
| TCGGTTGATAACAATAACAA+TGG | 0.618788 | 2_1:-73160549 | Msa0223570:exon |
| TGGGCAAATAATTTGGTCTG+TGG | 0.621983 | 2_1:-73157636 | Msa0223570:CDS |
| TGTCTCCTCCAGATCACCCA+AGG | 0.629643 | 2_1:-73156141 | Msa0223570:intron |
| CTTGAGTCTGGATCAAAGCA+GGG | 0.629895 | 2_1:-73155322 | Msa0223570:CDS |
| ACAGCTTGTTGGATGTGAGG+TGG | 0.631292 | 2_1:-73156353 | Msa0223570:intron |
| ATGCTCGGGAGTATTTGTAA+TGG | 0.634118 | 2_1:-73156165 | Msa0223570:CDS |
| TCGCACCCTCGACAAAAGAG+AGG | 0.637493 | 2_1:+73155371 | None:intergenic |
| TTTGTTAGCAATTTGAACAG+CGG | 0.638409 | 2_1:+73160397 | None:intergenic |
| ACAAGTCTGTGGATCAAGCA+GGG | 0.643738 | 2_1:-73155162 | Msa0223570:three_prime_UTR |
| TGTTTCTGAAAACACCCTCA+AGG | 0.651558 | 2_1:-73155677 | Msa0223570:intron |
| AGTGAAGATGAACAAGTCTG+TGG | 0.673771 | 2_1:-73155173 | Msa0223570:three_prime_UTR |
| AGATCTCCGAGAGTCTTGGA+AGG | 0.674115 | 2_1:+73160474 | None:intergenic |
| ACAGATGATATATTATCTGG+CGG | 0.689783 | 2_1:+73156286 | None:intergenic |
| AGCCAAAACGACAAGAACAG+CGG | 0.710945 | 2_1:+73160301 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTAATAATGACATTAAAT+TGG | + | chr2_1:73155918-73155937 | None:intergenic | 10.0% |
| !!! | TTTGAATTTTCTTTAATTTT+AGG | - | chr2_1:73156080-73156099 | Msa0223570:intron | 10.0% |
| !!! | TTGAATTTTCTTTAATTTTA+GGG | - | chr2_1:73156081-73156100 | Msa0223570:intron | 10.0% |
| !! | TTAATTAATCAAATATATAG+CGG | - | chr2_1:73156153-73156172 | Msa0223570:CDS | 10.0% |
| !!! | TATAAATCATTTTTCTTTTA+TGG | - | chr2_1:73156789-73156808 | Msa0223570:intron | 10.0% |
| !!! | TTTTTTTCAATTAAGATTAG+AGG | - | chr2_1:73155675-73155694 | Msa0223570:intron | 15.0% |
| !!! | TTTTTTCAATTAAGATTAGA+GGG | - | chr2_1:73155676-73155695 | Msa0223570:intron | 15.0% |
| !! | ATAAATTATAAGCTCAAAAA+TGG | - | chr2_1:73155847-73155866 | Msa0223570:intron | 15.0% |
| !! | TAAATTATAAGCTCAAAAAT+GGG | - | chr2_1:73155848-73155867 | Msa0223570:intron | 15.0% |
| !!! | TACAATTTTAAGGATTAAAT+TGG | - | chr2_1:73156039-73156058 | Msa0223570:intron | 15.0% |
| !! | TAATTAATCAAATATATAGC+GGG | - | chr2_1:73156154-73156173 | Msa0223570:CDS | 15.0% |
| !!! | AAGAAAGAAATATTTGAAAT+AGG | - | chr2_1:73157232-73157251 | Msa0223570:intron | 15.0% |
| !!! | AGAAAGAAATATTTGAAATA+GGG | - | chr2_1:73157233-73157252 | Msa0223570:intron | 15.0% |
| !! | ATATTAGAAACTTAGTAATT+AGG | - | chr2_1:73159045-73159064 | Msa0223570:intron | 15.0% |
| !!! | GTTTTCATAAATAATATCTT+AGG | - | chr2_1:73159575-73159594 | Msa0223570:intron | 15.0% |
| !! | TATATAATTGAGAATAAGAA+AGG | + | chr2_1:73159909-73159928 | None:intergenic | 15.0% |
| !!! | GTAGATTCTTTTTTTTTTTT+TGG | + | chr2_1:73160262-73160281 | None:intergenic | 15.0% |
| !!! | ATCTTTTATTTACGTCATTT+TGG | + | chr2_1:73155353-73155372 | None:intergenic | 20.0% |
| !!! | TTTTTCAATTAAGATTAGAG+GGG | - | chr2_1:73155677-73155696 | Msa0223570:intron | 20.0% |
| !!! | TTACTTTTATTAGCTTATAG+TGG | + | chr2_1:73155759-73155778 | None:intergenic | 20.0% |
| !!! | TTGACTAATAAAGACATTTT+TGG | + | chr2_1:73155812-73155831 | None:intergenic | 20.0% |
| !! | TTAAATTGGTTATTTACTTG+CGG | - | chr2_1:73156053-73156072 | Msa0223570:intron | 20.0% |
| !!! | TTTTTTCCCAATAAAGTTTA+GGG | + | chr2_1:73156374-73156393 | None:intergenic | 20.0% |
| !! | TGACTAAATTTCTCTTTATT+TGG | - | chr2_1:73156651-73156670 | Msa0223570:intron | 20.0% |
| !! | CTATATTGCTAACTTAATTT+AGG | - | chr2_1:73156899-73156918 | Msa0223570:intron | 20.0% |
| !! | TAAGAAAAAGTTTCTACATT+TGG | - | chr2_1:73157374-73157393 | Msa0223570:intron | 20.0% |
| !! | GACAAAATAAATTATGTGAA+TGG | + | chr2_1:73157935-73157954 | None:intergenic | 20.0% |
| !!! | TTCACATAATTTATTTTGTC+AGG | - | chr2_1:73157935-73157954 | Msa0223570:intron | 20.0% |
| !!! | TCACATAATTTATTTTGTCA+GGG | - | chr2_1:73157936-73157955 | Msa0223570:intron | 20.0% |
| !! | TTTATGTATTTCCTTATATC+TGG | - | chr2_1:73158368-73158387 | Msa0223570:intron | 20.0% |
| !! | GTATTTGGTTATTTATGTTA+AGG | - | chr2_1:73158480-73158499 | Msa0223570:intron | 20.0% |
| !! | CAAAAGATGAAAAGAATTAA+TGG | - | chr2_1:73158989-73159008 | Msa0223570:CDS | 20.0% |
| !! | TTACTAAGTTTCTAATATAG+AGG | + | chr2_1:73159043-73159062 | None:intergenic | 20.0% |
| !! | TCATAAATAATATCTTAGGT+AGG | - | chr2_1:73159579-73159598 | Msa0223570:intron | 20.0% |
| !! | CATATACACATAATAGTTAA+TGG | - | chr2_1:73159965-73159984 | Msa0223570:intron | 20.0% |
| !! | AAAAAAAAAAAAGTTCATGC+TGG | - | chr2_1:73160013-73160032 | Msa0223570:intron | 20.0% |
| !! | AAAAAAAAAAAGTTCATGCT+GGG | - | chr2_1:73160014-73160033 | Msa0223570:intron | 20.0% |
| !!! | CTTTTTTTTTTTTTGGAACT+CGG | + | chr2_1:73160255-73160274 | None:intergenic | 20.0% |
| !! | CATTTATTGAAATTTATGAC+TGG | - | chr2_1:73160366-73160385 | Msa0223570:CDS | 20.0% |
| !!! | TGAACTTTGTTTATTTCAAT+CGG | - | chr2_1:73160608-73160627 | Msa0223570:five_prime_UTR | 20.0% |
| !! | TTTTCAATCTCAAATCCATT+TGG | - | chr2_1:73155022-73155041 | Msa0223570:three_prime_UTR | 25.0% |
| !! | CAAATTGCTAACAAACTTTT+TGG | - | chr2_1:73155078-73155097 | Msa0223570:three_prime_UTR | 25.0% |
| ! | GAATCTAAATTTGGAGATAA+CGG | - | chr2_1:73155111-73155130 | Msa0223570:three_prime_UTR | 25.0% |
| ! | AAAAAGTAGTTATGGAAGAA+TGG | + | chr2_1:73155219-73155238 | None:intergenic | 25.0% |
| !!! | GAGTTTTGAAAAAGTAGTTA+TGG | + | chr2_1:73155227-73155246 | None:intergenic | 25.0% |
| !!! | CTTTTTCAAAACTCAATCAT+TGG | - | chr2_1:73155233-73155252 | Msa0223570:intron | 25.0% |
| !! | AAATCGTTATCTGAAATTGT+AGG | - | chr2_1:73155381-73155400 | Msa0223570:CDS | 25.0% |
| !!! | TTTGAGTAAATAACTTGTTC+TGG | - | chr2_1:73155431-73155450 | Msa0223570:intron | 25.0% |
| ! | GGTAAAAAAATAGTGAATAG+CGG | - | chr2_1:73155515-73155534 | Msa0223570:intron | 25.0% |
| ! | GTAAAAAAATAGTGAATAGC+GGG | - | chr2_1:73155516-73155535 | Msa0223570:intron | 25.0% |
| !! | GAGGATAAATTTGAAACTAA+GGG | + | chr2_1:73155888-73155907 | None:intergenic | 25.0% |
| ! | GTCATTCCAAATACTAATAA+AGG | - | chr2_1:73155938-73155957 | Msa0223570:intron | 25.0% |
| ! | TTCGTACCTTTATTAGTATT+TGG | + | chr2_1:73155947-73155966 | None:intergenic | 25.0% |
| !! | ATTAACATTTTGCAATTCCA+GGG | - | chr2_1:73155971-73155990 | Msa0223570:CDS | 25.0% |
| !!! | ACTAGGTTGATACAATTTTA+AGG | - | chr2_1:73156029-73156048 | Msa0223570:intron | 25.0% |
| ! | ATTGTAAAATAGTGTCAACT+TGG | + | chr2_1:73156108-73156127 | None:intergenic | 25.0% |
| !! | GACACTATTTTACAATTTGA+AGG | - | chr2_1:73156112-73156131 | Msa0223570:intron | 25.0% |
| !!! | CTTTTTTCCCAATAAAGTTT+AGG | + | chr2_1:73156375-73156394 | None:intergenic | 25.0% |
| ! | AACAAATTATCAATTCTTGC+AGG | - | chr2_1:73156447-73156466 | Msa0223570:intron | 25.0% |
| ! | ATAAAGAGAAATTTAGTCAG+TGG | + | chr2_1:73156650-73156669 | None:intergenic | 25.0% |
| ! | TAATAGAATCTTAGAAGCTA+GGG | + | chr2_1:73156936-73156955 | None:intergenic | 25.0% |
| ! | TTAATAGAATCTTAGAAGCT+AGG | + | chr2_1:73156937-73156956 | None:intergenic | 25.0% |
| ! | CCTCAAATATCTTCTTAATT+AGG | + | chr2_1:73156960-73156979 | None:intergenic | 25.0% |
| ! | CCTAATTAAGAAGATATTTG+AGG | - | chr2_1:73156957-73156976 | Msa0223570:intron | 25.0% |
| ! | AACGCTAAATACTTATCTAT+TGG | - | chr2_1:73157073-73157092 | Msa0223570:intron | 25.0% |
| ! | TCATTACATATAAGTGAGAT+GGG | + | chr2_1:73157584-73157603 | None:intergenic | 25.0% |
| ! | TTCATTACATATAAGTGAGA+TGG | + | chr2_1:73157585-73157604 | None:intergenic | 25.0% |
| ! | TCTCACTTATATGTAATGAA+AGG | - | chr2_1:73157585-73157604 | Msa0223570:intron | 25.0% |
| ! | AAAGTTATCAATGTGATAGA+GGG | + | chr2_1:73157648-73157667 | None:intergenic | 25.0% |
| ! | ATATATTAATCTGATACTGC+AGG | - | chr2_1:73157751-73157770 | Msa0223570:intron | 25.0% |
| !! | ATCTGTATTTGTTTAAGTTC+AGG | - | chr2_1:73158098-73158117 | Msa0223570:intron | 25.0% |
| !! | TCTGTATTTGTTTAAGTTCA+GGG | - | chr2_1:73158099-73158118 | Msa0223570:intron | 25.0% |
| ! | TATTCTGGCATAAAAATGAA+GGG | - | chr2_1:73158162-73158181 | Msa0223570:intron | 25.0% |
| !! | TTCATAAAGTTTGTGGTTTT+AGG | + | chr2_1:73158229-73158248 | None:intergenic | 25.0% |
| ! | CTTTACTTTCATAAAGTTTG+TGG | + | chr2_1:73158236-73158255 | None:intergenic | 25.0% |
| !!! | AAGGTATTATTTTTCCTTTC+TGG | - | chr2_1:73158499-73158518 | Msa0223570:intron | 25.0% |
| !! | TGATAAATGCTGATTATCTT+TGG | - | chr2_1:73158667-73158686 | Msa0223570:intron | 25.0% |
| ! | TTCCATACTCAAGTTTATTT+CGG | + | chr2_1:73158787-73158806 | None:intergenic | 25.0% |
| ! | ACTTCTATACAATGATTTGA+TGG | - | chr2_1:73159072-73159091 | Msa0223570:intron | 25.0% |
| ! | AAGACAGATGATATATTATC+TGG | + | chr2_1:73159187-73159206 | None:intergenic | 25.0% |
| !!! | AAGTTATTTCTGGAAAATAG+AGG | + | chr2_1:73159215-73159234 | None:intergenic | 25.0% |
| !! | AGTGTTTGTAAAGTTATTTC+TGG | + | chr2_1:73159225-73159244 | None:intergenic | 25.0% |
| ! | TGAAGTAATTGCAAATTAAG+TGG | + | chr2_1:73159627-73159646 | None:intergenic | 25.0% |
| ! | TCAGATAGTAATGAAGATAA+CGG | + | chr2_1:73159663-73159682 | None:intergenic | 25.0% |
| ! | ATTTCATTATATGATGCTCA+TGG | - | chr2_1:73159701-73159720 | Msa0223570:intron | 25.0% |
| !! | TCATATTTTCTTTTACTGCA+CGG | - | chr2_1:73160514-73160533 | Msa0223570:CDS | 25.0% |
| !! | CAAGATTAGCATTTTCTTTT+GGG | + | chr2_1:73160559-73160578 | None:intergenic | 25.0% |
| ! | CAAAAGAAAATGCTAATCTT+GGG | - | chr2_1:73160558-73160577 | Msa0223570:five_prime_UTR | 25.0% |
| !! | TCGGTTGATAACAATAACAA+TGG | - | chr2_1:73154918-73154937 | Msa0223570:three_prime_UTR | 30.0% |
| TTTGTTAGCAATTTGAACAG+CGG | + | chr2_1:73155073-73155092 | None:intergenic | 30.0% | |
| ! | ATTGCTAACAAACTTTTTGG+TGG | - | chr2_1:73155081-73155100 | Msa0223570:three_prime_UTR | 30.0% |
| GGAAATGTGGAATCTAAATT+TGG | - | chr2_1:73155102-73155121 | Msa0223570:three_prime_UTR | 30.0% | |
| TGAAGATACATCTAGATAGA+GGG | + | chr2_1:73155481-73155500 | None:intergenic | 30.0% | |
| ATCTAGATGTATCTTCACTA+AGG | - | chr2_1:73155484-73155503 | Msa0223570:intron | 30.0% | |
| TGATAAGCTTAGCTTATATC+AGG | - | chr2_1:73155558-73155577 | Msa0223570:intron | 30.0% | |
| TATATCAGGTGAGCTTATAA+TGG | - | chr2_1:73155572-73155591 | Msa0223570:intron | 30.0% | |
| !! | CTTATAATGGATAGGTGATA+GGG | - | chr2_1:73155585-73155604 | Msa0223570:intron | 30.0% |
| ! | CGAGGATAAATTTGAAACTA+AGG | + | chr2_1:73155889-73155908 | None:intergenic | 30.0% |
| !! | ACATTAAATTGGTAATGTCG+AGG | + | chr2_1:73155907-73155926 | None:intergenic | 30.0% |
| ! | GATTAACATTTTGCAATTCC+AGG | - | chr2_1:73155970-73155989 | Msa0223570:CDS | 30.0% |
| TATTGGGAAAAAAGAGTCAT+TGG | - | chr2_1:73156381-73156400 | Msa0223570:intron | 30.0% | |
| !!! | ATTGGAATCATGTTTTTTGC+TGG | - | chr2_1:73156399-73156418 | Msa0223570:intron | 30.0% |
| !! | TTTGCTGGAGTTTATTTTTC+AGG | - | chr2_1:73156414-73156433 | Msa0223570:intron | 30.0% |
| CATCTCACTCAAATTGTTAA+AGG | - | chr2_1:73156474-73156493 | Msa0223570:intron | 30.0% | |
| GTAACAAATGTCAATACAGT+AGG | + | chr2_1:73156598-73156617 | None:intergenic | 30.0% | |
| TTTGGATGTATTGTATGCAT+TGG | - | chr2_1:73156669-73156688 | Msa0223570:intron | 30.0% | |
| TTGGATGTATTGTATGCATT+GGG | - | chr2_1:73156670-73156689 | Msa0223570:intron | 30.0% | |
| !!! | TCTTGTTTTTGCATGATTCT+AGG | - | chr2_1:73156832-73156851 | Msa0223570:intron | 30.0% |
| ACCTTGTCAGTAAAAAAAAG+TGG | + | chr2_1:73157140-73157159 | None:intergenic | 30.0% | |
| !! | CTCTTTCGTGTTATTTCAAA+GGG | + | chr2_1:73157438-73157457 | None:intergenic | 30.0% |
| !! | CTTTGAAATAACACGAAAGA+GGG | - | chr2_1:73157437-73157456 | Msa0223570:CDS | 30.0% |
| AAGTCACTACTAAGTATCAT+CGG | + | chr2_1:73157611-73157630 | None:intergenic | 30.0% | |
| GAAAGTTATCAATGTGATAG+AGG | + | chr2_1:73157649-73157668 | None:intergenic | 30.0% | |
| TTATTTGCCTCTCTATTAGA+TGG | - | chr2_1:73157689-73157708 | Msa0223570:CDS | 30.0% | |
| ! | TACGCTAAGAGTTTAGAATA+GGG | + | chr2_1:73157728-73157747 | None:intergenic | 30.0% |
| ! | TTACGCTAAGAGTTTAGAAT+AGG | + | chr2_1:73157729-73157748 | None:intergenic | 30.0% |
| AGAAACAAATACCTCAACTA+AGG | + | chr2_1:73157881-73157900 | None:intergenic | 30.0% | |
| !! | GACATTTTAACCTATGAATC+TGG | - | chr2_1:73157905-73157924 | Msa0223570:intron | 30.0% |
| AGTGTGCAAGTTATTATAGA+AGG | - | chr2_1:73157993-73158012 | Msa0223570:intron | 30.0% | |
| TCCAAGAGCTTGAAAAATAA+GGG | + | chr2_1:73158037-73158056 | None:intergenic | 30.0% | |
| ! | CTGTATTTGTTTAAGTTCAG+GGG | - | chr2_1:73158100-73158119 | Msa0223570:intron | 30.0% |
| CTTAATCAACTCTACTATTC+TGG | - | chr2_1:73158147-73158166 | Msa0223570:intron | 30.0% | |
| CTATTCTGGCATAAAAATGA+AGG | - | chr2_1:73158161-73158180 | Msa0223570:intron | 30.0% | |
| ATTCTGGCATAAAAATGAAG+GGG | - | chr2_1:73158163-73158182 | Msa0223570:intron | 30.0% | |
| !!! | TCCTTTTAGTTTAGATGACA+TGG | - | chr2_1:73158289-73158308 | Msa0223570:intron | 30.0% |
| TGCTAGTATAACCAGATATA+AGG | + | chr2_1:73158382-73158401 | None:intergenic | 30.0% | |
| ! | AACTTTTGTGCTACATGTAA+GGG | + | chr2_1:73158439-73158458 | None:intergenic | 30.0% |
| ! | AAACTTTTGTGCTACATGTA+AGG | + | chr2_1:73158440-73158459 | None:intergenic | 30.0% |
| ! | TGTTTTCTCTCAACAGTATT+TGG | - | chr2_1:73158465-73158484 | Msa0223570:intron | 30.0% |
| !! | TATTATTTTTCCTTTCTGGC+AGG | - | chr2_1:73158503-73158522 | Msa0223570:intron | 30.0% |
| !! | ATTATTTTTCCTTTCTGGCA+GGG | - | chr2_1:73158504-73158523 | Msa0223570:intron | 30.0% |
| ! | GTATTTTGTTGCGCAATTTA+TGG | - | chr2_1:73158641-73158660 | Msa0223570:intron | 30.0% |
| TTATCTTTGGTCTAATCAAC+TGG | - | chr2_1:73158680-73158699 | Msa0223570:intron | 30.0% | |
| TATCTTTGGTCTAATCAACT+GGG | - | chr2_1:73158681-73158700 | Msa0223570:intron | 30.0% | |
| TTGAAATGTTTCTCACTTCA+TGG | - | chr2_1:73158852-73158871 | Msa0223570:intron | 30.0% | |
| ! | ATAGAGAACTGCTTTCATTT+TGG | - | chr2_1:73158890-73158909 | Msa0223570:intron | 30.0% |
| !!! | TTTCATCTTTTGACTTCCTA+AGG | + | chr2_1:73158981-73159000 | None:intergenic | 30.0% |
| TCTATACAATGATTTGATGG+TGG | - | chr2_1:73159075-73159094 | Msa0223570:intron | 30.0% | |
| ACAGATGATATATTATCTGG+CGG | + | chr2_1:73159184-73159203 | None:intergenic | 30.0% | |
| ! | CAACAATATTTTCAGACTTC+CGG | + | chr2_1:73159251-73159270 | None:intergenic | 30.0% |
| AATGTTTATCCTCAGTCATT+TGG | - | chr2_1:73159272-73159291 | Msa0223570:intron | 30.0% | |
| TATGAGCATATCTACTGTTT+GGG | + | chr2_1:73159402-73159421 | None:intergenic | 30.0% | |
| TTATGAGCATATCTACTGTT+TGG | + | chr2_1:73159403-73159422 | None:intergenic | 30.0% | |
| ! | TTCTTGCAAGTTTTTACTCA+TGG | - | chr2_1:73159435-73159454 | Msa0223570:intron | 30.0% |
| TGAACACATTATAGATCTTG+TGG | - | chr2_1:73159461-73159480 | Msa0223570:intron | 30.0% | |
| TGTACTATAGTTACAGTTAC+AGG | - | chr2_1:73159553-73159572 | Msa0223570:intron | 30.0% | |
| GCAAATTAAGTGGATATTGA+AGG | + | chr2_1:73159617-73159636 | None:intergenic | 30.0% | |
| CAAGAATCTAATTACCTTGA+GGG | + | chr2_1:73159807-73159826 | None:intergenic | 30.0% | |
| !!! | AGTTCTACCTTCTCATTTTT+TGG | - | chr2_1:73159841-73159860 | Msa0223570:intron | 30.0% |
| AATGGAACCAAAAAATGAGA+AGG | + | chr2_1:73159851-73159870 | None:intergenic | 30.0% | |
| TATAGACGAGGAATTTGTAA+TGG | + | chr2_1:73159869-73159888 | None:intergenic | 30.0% | |
| ! | TTTTCTGAATCAACTGTTTG+TGG | + | chr2_1:73159942-73159961 | None:intergenic | 30.0% |
| ! | GTTCATGTGAAAAAGTTTTG+AGG | - | chr2_1:73160175-73160194 | Msa0223570:intron | 30.0% |
| TAATCATAGAACTCTTTGCA+TGG | - | chr2_1:73160198-73160217 | Msa0223570:intron | 30.0% | |
| TCTGTAGATATTGAATGAAG+AGG | + | chr2_1:73160224-73160243 | None:intergenic | 30.0% | |
| ATGTGATTGGATGAAGTTAT+AGG | - | chr2_1:73160334-73160353 | Msa0223570:CDS | 30.0% | |
| ! | CCAAGATTAGCATTTTCTTT+TGG | + | chr2_1:73160560-73160579 | None:intergenic | 30.0% |
| CCAAAAGAAAATGCTAATCT+TGG | - | chr2_1:73160557-73160576 | Msa0223570:five_prime_UTR | 30.0% | |
| TCAGTAAGCTAGTACAGAAT+TGG | - | chr2_1:73154883-73154902 | Msa0223570:three_prime_UTR | 35.0% | |
| AAGCTAGTACAGAATTGGAT+TGG | - | chr2_1:73154888-73154907 | Msa0223570:three_prime_UTR | 35.0% | |
| ! | GAATTGGATTGGATCGAAAT+CGG | - | chr2_1:73154899-73154918 | Msa0223570:three_prime_UTR | 35.0% |
| !! | CAAACTTTTTGGTGGAAATG+TGG | - | chr2_1:73155089-73155108 | Msa0223570:three_prime_UTR | 35.0% |
| GTGAAGATACATCTAGATAG+AGG | + | chr2_1:73155482-73155501 | None:intergenic | 35.0% | |
| ATCTTCACTAAGGTTCTGTT+TGG | - | chr2_1:73155494-73155513 | Msa0223570:intron | 35.0% | |
| !! | GCTTATAATGGATAGGTGAT+AGG | - | chr2_1:73155584-73155603 | Msa0223570:intron | 35.0% |
| ! | TTTGAAACTAAGGGTCTGTT+TGG | + | chr2_1:73155879-73155898 | None:intergenic | 35.0% |
| CATGATTTCAAAATGATCCC+TGG | + | chr2_1:73155991-73156010 | None:intergenic | 35.0% | |
| !!! | CAGGGATCATTTTGAAATCA+TGG | - | chr2_1:73155989-73156008 | Msa0223570:CDS | 35.0% |
| TAGAGTCATTGAAACTCCAA+GGG | - | chr2_1:73156194-73156213 | Msa0223570:intron | 35.0% | |
| AATACCTATCTAAGTGCTCT+TGG | - | chr2_1:73156303-73156322 | Msa0223570:CDS | 35.0% | |
| TCACTCAAATTGTTAAAGGC+TGG | - | chr2_1:73156478-73156497 | Msa0223570:intron | 35.0% | |
| TGCAACAATCATTACCTTGA+AGG | + | chr2_1:73156513-73156532 | None:intergenic | 35.0% | |
| TACAGTAGGATAATGAGTAG+TGG | + | chr2_1:73156584-73156603 | None:intergenic | 35.0% | |
| TGGATGTATTGTATGCATTG+GGG | - | chr2_1:73156671-73156690 | Msa0223570:intron | 35.0% | |
| !!! | GCCACTTTTTTTTACTGACA+AGG | - | chr2_1:73157136-73157155 | Msa0223570:intron | 35.0% |
| !! | AAATGTTAACTTGTGCCCTT+GGG | + | chr2_1:73157415-73157434 | None:intergenic | 35.0% |
| !! | CCTCTTTCGTGTTATTTCAA+AGG | + | chr2_1:73157439-73157458 | None:intergenic | 35.0% |
| !! | CCTTTGAAATAACACGAAAG+AGG | - | chr2_1:73157436-73157455 | Msa0223570:CDS | 35.0% |
| ATGATTGCTACAAATAGGCT+TGG | + | chr2_1:73157496-73157515 | None:intergenic | 35.0% | |
| GACTCATGATTGCTACAAAT+AGG | + | chr2_1:73157501-73157520 | None:intergenic | 35.0% | |
| TGGATTATGGAATTTCAGCA+GGG | - | chr2_1:73157543-73157562 | Msa0223570:intron | 35.0% | |
| TACATATAAGTGAGATGGGA+TGG | + | chr2_1:73157580-73157599 | None:intergenic | 35.0% | |
| GATGATACTTAGTAGTGACT+TGG | - | chr2_1:73157610-73157629 | Msa0223570:CDS | 35.0% | |
| CAACTTTCCATCTAATAGAG+AGG | + | chr2_1:73157699-73157718 | None:intergenic | 35.0% | |
| AAGAAACTAATTGCTGACCT+TGG | - | chr2_1:73157960-73157979 | Msa0223570:intron | 35.0% | |
| AGAAACTAATTGCTGACCTT+GGG | - | chr2_1:73157961-73157980 | Msa0223570:intron | 35.0% | |
| !!! | ACCCTTATTTTTCAAGCTCT+TGG | - | chr2_1:73158033-73158052 | Msa0223570:intron | 35.0% |
| CTCCAAGAGCTTGAAAAATA+AGG | + | chr2_1:73158038-73158057 | None:intergenic | 35.0% | |
| !!! | CTTATTTTTCAAGCTCTTGG+AGG | - | chr2_1:73158036-73158055 | Msa0223570:intron | 35.0% |
| GCCATGTCATCTAAACTAAA+AGG | + | chr2_1:73158293-73158312 | None:intergenic | 35.0% | |
| CATTCACTTTCAGTTCATCA+CGG | - | chr2_1:73158344-73158363 | Msa0223570:intron | 35.0% | |
| GGAGGTTTCATTCTTGATAT+GGG | - | chr2_1:73158525-73158544 | Msa0223570:intron | 35.0% | |
| TGCCGAAATAAACTTGAGTA+TGG | - | chr2_1:73158782-73158801 | Msa0223570:intron | 35.0% | |
| CGTTTAAATCAGACAAGCAA+TGG | + | chr2_1:73158813-73158832 | None:intergenic | 35.0% | |
| !! | TTCATTTTGGCACCAATTTG+AGG | - | chr2_1:73158903-73158922 | Msa0223570:intron | 35.0% |
| ATGAAATTTCCTGTCTCCTT+AGG | - | chr2_1:73158962-73158981 | Msa0223570:intron | 35.0% | |
| TAACTTTACAAACACTCGAC+CGG | - | chr2_1:73159229-73159248 | Msa0223570:intron | 35.0% | |
| CGGAAGTCTGAAAATATTGT+TGG | - | chr2_1:73159249-73159268 | Msa0223570:intron | 35.0% | |
| CTGTAACTATAGTACATACC+AGG | + | chr2_1:73159549-73159568 | None:intergenic | 35.0% | |
| TGGATATTGAAGGAAAAGCT+CGG | + | chr2_1:73159607-73159626 | None:intergenic | 35.0% | |
| GCAAGAATCTAATTACCTTG+AGG | + | chr2_1:73159808-73159827 | None:intergenic | 35.0% | |
| AAAATGAGAAGGTAGAACTG+AGG | + | chr2_1:73159840-73159859 | None:intergenic | 35.0% | |
| GATGAACAAAGATATAGACG+AGG | + | chr2_1:73159881-73159900 | None:intergenic | 35.0% | |
| TCAACTGTTTGTGGTAAGTT+TGG | + | chr2_1:73159933-73159952 | None:intergenic | 35.0% | |
| AAAAAAAAGTTCATGCTGGG+AGG | - | chr2_1:73160017-73160036 | Msa0223570:intron | 35.0% | |
| ! | ATTCACTTCCATTTTGCAGA+AGG | - | chr2_1:73160054-73160073 | Msa0223570:intron | 35.0% |
| ! | TTCACTTCCATTTTGCAGAA+GGG | - | chr2_1:73160055-73160074 | Msa0223570:intron | 35.0% |
| CTGAAACTTCTAATATCTCG+AGG | - | chr2_1:73160408-73160427 | Msa0223570:CDS | 35.0% | |
| TGTTGATACAGGGACAAATT+AGG | - | chr2_1:73160486-73160505 | Msa0223570:CDS | 35.0% | |
| TCAATACCTTCCAAGACTCT+CGG | - | chr2_1:73154987-73155006 | Msa0223570:three_prime_UTR | 40.0% | |
| ATCTTGAGTTCGACTCCAAA+TGG | + | chr2_1:73155040-73155059 | None:intergenic | 40.0% | |
| !! | CAGGTGAGCTTATAATGGAT+AGG | - | chr2_1:73155577-73155596 | Msa0223570:intron | 40.0% |
| ! | TCATGGTAATGTGCTCATGA+AGG | - | chr2_1:73156006-73156025 | Msa0223570:intron | 40.0% |
| TAATGTGCTCATGAAGGACT+AGG | - | chr2_1:73156012-73156031 | Msa0223570:intron | 40.0% | |
| GTAGAGTCATTGAAACTCCA+AGG | - | chr2_1:73156193-73156212 | Msa0223570:intron | 40.0% | |
| TCATTGAAACTCCAAGGGAT+TGG | - | chr2_1:73156199-73156218 | Msa0223570:intron | 40.0% | |
| TGGTCTAGTGGTAAAAACAC+AGG | - | chr2_1:73156219-73156238 | Msa0223570:intron | 40.0% | |
| AGTGGTAAAAACACAGGTGT+TGG | - | chr2_1:73156225-73156244 | Msa0223570:intron | 40.0% | |
| !! | AAAAACACAGGTGTTGGATC+TGG | - | chr2_1:73156231-73156250 | Msa0223570:intron | 40.0% |
| TTTATATTGACCTCCCTCCA+GGG | + | chr2_1:73156285-73156304 | None:intergenic | 40.0% | |
| ATTTATATTGACCTCCCTCC+AGG | + | chr2_1:73156286-73156305 | None:intergenic | 40.0% | |
| ! | CCAATAAAGTTTAGGGTGAG+GGG | + | chr2_1:73156367-73156386 | None:intergenic | 40.0% |
| ! | CCCAATAAAGTTTAGGGTGA+GGG | + | chr2_1:73156368-73156387 | None:intergenic | 40.0% |
| CCCTCACCCTAAACTTTATT+GGG | - | chr2_1:73156365-73156384 | Msa0223570:intron | 40.0% | |
| ! | TCCCAATAAAGTTTAGGGTG+AGG | + | chr2_1:73156369-73156388 | None:intergenic | 40.0% |
| GGATGTATTGTATGCATTGG+GGG | - | chr2_1:73156672-73156691 | Msa0223570:intron | 40.0% | |
| ! | TGGTGGATATGAAGAGAAAC+CGG | - | chr2_1:73156702-73156721 | Msa0223570:intron | 40.0% |
| GCATGCAGACTAAGAAAGTA+TGG | + | chr2_1:73156869-73156888 | None:intergenic | 40.0% | |
| TAGAATCTTAGAAGCTAGGG+AGG | + | chr2_1:73156933-73156952 | None:intergenic | 40.0% | |
| GTTGCATTTAAGCACACTTG+AGG | - | chr2_1:73157035-73157054 | Msa0223570:intron | 40.0% | |
| ! | TTTAGCGTTAGAAAGTGTGC+AGG | + | chr2_1:73157062-73157081 | None:intergenic | 40.0% |
| ! | TAGTCTTGCAGCAGTTATAG+TGG | - | chr2_1:73157179-73157198 | Msa0223570:intron | 40.0% |
| AGTCTTGCAGCAGTTATAGT+GGG | - | chr2_1:73157180-73157199 | Msa0223570:intron | 40.0% | |
| !! | TCATGTTAACTTGTGCCCTA+AGG | - | chr2_1:73157256-73157275 | Msa0223570:intron | 40.0% |
| !! | CATGTTAACTTGTGCCCTAA+GGG | - | chr2_1:73157257-73157276 | Msa0223570:intron | 40.0% |
| TTCCTTAACTTATGCCCCAA+GGG | - | chr2_1:73157397-73157416 | Msa0223570:intron | 40.0% | |
| !! | AATGTTAACTTGTGCCCTTG+GGG | + | chr2_1:73157414-73157433 | None:intergenic | 40.0% |
| !! | GAAATGTTAACTTGTGCCCT+TGG | + | chr2_1:73157416-73157435 | None:intergenic | 40.0% |
| CTGGATTATGGAATTTCAGC+AGG | - | chr2_1:73157542-73157561 | Msa0223570:intron | 40.0% | |
| GGATTATGGAATTTCAGCAG+GGG | - | chr2_1:73157544-73157563 | Msa0223570:intron | 40.0% | |
| ATGCTCCTGGGCAAATAATT+TGG | - | chr2_1:73157824-73157843 | Msa0223570:intron | 40.0% | |
| ACAGACCAAATTATTTGCCC+AGG | + | chr2_1:73157832-73157851 | None:intergenic | 40.0% | |
| TGGGCAAATAATTTGGTCTG+TGG | - | chr2_1:73157831-73157850 | Msa0223570:intron | 40.0% | |
| ACAAATACCTCAACTAAGGC+AGG | + | chr2_1:73157877-73157896 | None:intergenic | 40.0% | |
| GGGAGGTTTCATTCTTGATA+TGG | - | chr2_1:73158524-73158543 | Msa0223570:intron | 40.0% | |
| TGCATTTCATTGCAGGGTTA+AGG | - | chr2_1:73158550-73158569 | Msa0223570:intron | 40.0% | |
| TTTCATTGCAGGGTTAAGGA+TGG | - | chr2_1:73158554-73158573 | Msa0223570:intron | 40.0% | |
| TCTAATCAACTGGGACTCTT+TGG | - | chr2_1:73158690-73158709 | Msa0223570:intron | 40.0% | |
| TTACAGATCGAGCCTCAAAT+TGG | + | chr2_1:73158918-73158937 | None:intergenic | 40.0% | |
| !!! | TTTTGACTTCCTAAGGAGAC+AGG | + | chr2_1:73158974-73158993 | None:intergenic | 40.0% |
| AACAAGCTGTCGAGAGTAAA+AGG | + | chr2_1:73159104-73159123 | None:intergenic | 40.0% | |
| ! | TTTTACTCTCGACAGCTTGT+TGG | - | chr2_1:73159103-73159122 | Msa0223570:intron | 40.0% |
| TTCAGCTATGACATCTCATG+TGG | - | chr2_1:73159144-73159163 | Msa0223570:intron | 40.0% | |
| TATATTATCTGGCGGTGGTA+AGG | + | chr2_1:73159176-73159195 | None:intergenic | 40.0% | |
| GATGATATATTATCTGGCGG+TGG | + | chr2_1:73159181-73159200 | None:intergenic | 40.0% | |
| ATCCTCAGTCATTTGGAGAA+TGG | - | chr2_1:73159279-73159298 | Msa0223570:intron | 40.0% | |
| ATCCATTCTCCAAATGACTG+AGG | + | chr2_1:73159284-73159303 | None:intergenic | 40.0% | |
| TCATTTGGAGAATGGATGCT+CGG | - | chr2_1:73159287-73159306 | Msa0223570:intron | 40.0% | |
| !! | ATGCTCGGGAGTATTTGTAA+TGG | - | chr2_1:73159302-73159321 | Msa0223570:intron | 40.0% |
| GATCATTTACCACATGCCTT+GGG | + | chr2_1:73159345-73159364 | None:intergenic | 40.0% | |
| TGATCATTTACCACATGCCT+TGG | + | chr2_1:73159346-73159365 | None:intergenic | 40.0% | |
| ! | AGTTCCTTTTTCCCTTTCAG+TGG | - | chr2_1:73159734-73159753 | Msa0223570:intron | 40.0% |
| TACTCCACTGAAAGGGAAAA+AGG | + | chr2_1:73159741-73159760 | None:intergenic | 40.0% | |
| CTTCAGTTACTCCACTGAAA+GGG | + | chr2_1:73159748-73159767 | None:intergenic | 40.0% | |
| TCTTCAGTTACTCCACTGAA+AGG | + | chr2_1:73159749-73159768 | None:intergenic | 40.0% | |
| ! | GAGAGATGTTGCTCTTTTAG+AGG | - | chr2_1:73160117-73160136 | Msa0223570:intron | 40.0% |
| ! | CAGACTTGTTCATCTTCACT+TGG | + | chr2_1:73160294-73160313 | None:intergenic | 40.0% |
| AGTGAAGATGAACAAGTCTG+TGG | - | chr2_1:73160294-73160313 | Msa0223570:CDS | 40.0% | |
| CCTAGAATCGCGATCTGTAT+TGG | + | chr2_1:73154946-73154965 | None:intergenic | 45.0% | |
| CCAATACAGATCGCGATTCT+AGG | - | chr2_1:73154943-73154962 | Msa0223570:three_prime_UTR | 45.0% | |
| AACGACAAGAACAGCGGTTA+TGG | + | chr2_1:73155163-73155182 | None:intergenic | 45.0% | |
| !! | AACCGCTGTTCTTGTCGTTT+TGG | - | chr2_1:73155164-73155183 | Msa0223570:three_prime_UTR | 45.0% |
| AGCCAAAACGACAAGAACAG+CGG | + | chr2_1:73155169-73155188 | None:intergenic | 45.0% | |
| !!! | CGTTTTGGCTGGACAATATC+AGG | - | chr2_1:73155179-73155198 | Msa0223570:three_prime_UTR | 45.0% |
| TTACCACTAGACCAATCCCT+TGG | + | chr2_1:73156213-73156232 | None:intergenic | 45.0% | |
| TTATATTGACCTCCCTCCAG+GGG | + | chr2_1:73156284-73156303 | None:intergenic | 45.0% | |
| CCCCTCACCCTAAACTTTAT+TGG | - | chr2_1:73156364-73156383 | Msa0223570:intron | 45.0% | |
| GCTGGTAAACATGTCCTTCA+AGG | - | chr2_1:73156496-73156515 | Msa0223570:intron | 45.0% | |
| TATGCATTGGGGGACTGATT+TGG | - | chr2_1:73156682-73156701 | Msa0223570:intron | 45.0% | |
| GTCTTGCAGCAGTTATAGTG+GGG | - | chr2_1:73157181-73157200 | Msa0223570:intron | 45.0% | |
| !! | CTCCTTAACTTGTGCCCTTA+GGG | + | chr2_1:73157274-73157293 | None:intergenic | 45.0% |
| !! | TCTCCTTAACTTGTGCCCTT+AGG | + | chr2_1:73157275-73157294 | None:intergenic | 45.0% |
| GTTCCTTAACTTATGCCCCA+AGG | - | chr2_1:73157396-73157415 | Msa0223570:intron | 45.0% | |
| TGCTACAAATAGGCTTGGCT+TGG | + | chr2_1:73157491-73157510 | None:intergenic | 45.0% | |
| TACTGCAGGTATAACTGAGC+TGG | - | chr2_1:73157765-73157784 | Msa0223570:intron | 45.0% | |
| ! | TTTTGAGCCTGCCTTAGTTG+AGG | - | chr2_1:73157867-73157886 | Msa0223570:intron | 45.0% |
| GAATGGACAGCCAGATTCAT+AGG | + | chr2_1:73157918-73157937 | None:intergenic | 45.0% | |
| ! | GCACACTCATCATTTTCCCA+AGG | + | chr2_1:73157980-73157999 | None:intergenic | 45.0% |
| TAGTTTAGATGACATGGCCG+CGG | - | chr2_1:73158295-73158314 | Msa0223570:intron | 45.0% | |
| TTGACTTTCTCAGTACTCCG+CGG | + | chr2_1:73158315-73158334 | None:intergenic | 45.0% | |
| !! | ATTTTTCCTTTCTGGCAGGG+AGG | - | chr2_1:73158507-73158526 | Msa0223570:intron | 45.0% |
| ATGGGTGTGCATTTCATTGC+AGG | - | chr2_1:73158543-73158562 | Msa0223570:intron | 45.0% | |
| TGGGTGTGCATTTCATTGCA+GGG | - | chr2_1:73158544-73158563 | Msa0223570:intron | 45.0% | |
| CATTTGGAGAATGGATGCTC+GGG | - | chr2_1:73159288-73159307 | Msa0223570:intron | 45.0% | |
| GAATCCACGCTCAATCTGAA+GGG | + | chr2_1:73159509-73159528 | None:intergenic | 45.0% | |
| ! | ACTTCCATTTTGCAGAAGGG+CGG | - | chr2_1:73160058-73160077 | Msa0223570:intron | 45.0% |
| TTAGAGGCAATGCTTGAGTC+TGG | - | chr2_1:73160133-73160152 | Msa0223570:intron | 45.0% | |
| CTTGAGTCTGGATCAAAGCA+GGG | - | chr2_1:73160145-73160164 | Msa0223570:intron | 45.0% | |
| AACAAGTCTGTGGATCAAGC+AGG | - | chr2_1:73160304-73160323 | Msa0223570:CDS | 45.0% | |
| ACAAGTCTGTGGATCAAGCA+GGG | - | chr2_1:73160305-73160324 | Msa0223570:CDS | 45.0% | |
| AGCAGGGAGATCAATGTGAT+TGG | - | chr2_1:73160321-73160340 | Msa0223570:CDS | 45.0% | |
| TCCCATGCATCTGTTGATAC+AGG | - | chr2_1:73160475-73160494 | Msa0223570:CDS | 45.0% | |
| CCCTGTATCAACAGATGCAT+GGG | + | chr2_1:73160479-73160498 | None:intergenic | 45.0% | |
| CCCATGCATCTGTTGATACA+GGG | - | chr2_1:73160476-73160495 | Msa0223570:CDS | 45.0% | |
| TCCCTGTATCAACAGATGCA+TGG | + | chr2_1:73160480-73160499 | None:intergenic | 45.0% | |
| TCAAGTACTCAAAGCGTGTC+AGG | + | chr2_1:73160641-73160660 | None:intergenic | 45.0% | |
| AGATCTCCGAGAGTCTTGGA+AGG | + | chr2_1:73154996-73155015 | None:intergenic | 50.0% | |
| TGTGAGATCTCCGAGAGTCT+TGG | + | chr2_1:73155000-73155019 | None:intergenic | 50.0% | |
| !!! | GCTGTTCTTGTCGTTTTGGC+TGG | - | chr2_1:73155168-73155187 | Msa0223570:three_prime_UTR | 50.0% |
| !! | ACTCCAAGGGATTGGTCTAG+TGG | - | chr2_1:73156207-73156226 | Msa0223570:intron | 50.0% |
| !! | AACACAGGTGTTGGATCTGG+AGG | - | chr2_1:73156234-73156253 | Msa0223570:intron | 50.0% |
| ! | GGTGTTGGATCTGGAGGTTT+CGG | - | chr2_1:73156240-73156259 | Msa0223570:intron | 50.0% |
| GTGTTGGATCTGGAGGTTTC+GGG | - | chr2_1:73156241-73156260 | Msa0223570:intron | 50.0% | |
| !! | GGCTCCAAGAGCACTTAGAT+AGG | + | chr2_1:73156310-73156329 | None:intergenic | 50.0% |
| TAAGTGCTCTTGGAGCCCTA+AGG | - | chr2_1:73156313-73156332 | Msa0223570:CDS | 50.0% | |
| CCAAGGCAGAGAAGACCTTA+GGG | + | chr2_1:73156331-73156350 | None:intergenic | 50.0% | |
| TCCAAGGCAGAGAAGACCTT+AGG | + | chr2_1:73156332-73156351 | None:intergenic | 50.0% | |
| ! | TGCTACTTACCAGATGCTGC+CGG | + | chr2_1:73156724-73156743 | None:intergenic | 50.0% |
| ! | TGCCCTAAGGGCACAAGTTA+AGG | - | chr2_1:73157269-73157288 | Msa0223570:intron | 50.0% |
| TGCCCTTGGGGCATAAGTTA+AGG | + | chr2_1:73157402-73157421 | None:intergenic | 50.0% | |
| GTATTAAGCTGCACGCTAGC+TGG | - | chr2_1:73157523-73157542 | Msa0223570:intron | 50.0% | |
| TCGATTTCTGCTGATGCTCC+TGG | - | chr2_1:73157811-73157830 | Msa0223570:intron | 50.0% | |
| CGATTTCTGCTGATGCTCCT+GGG | - | chr2_1:73157812-73157831 | Msa0223570:intron | 50.0% | |
| ATGAAACCTCCCTGCCAGAA+AGG | + | chr2_1:73158516-73158535 | None:intergenic | 50.0% | |
| !! | TCGACAGCTTGTTGGATGTG+AGG | - | chr2_1:73159111-73159130 | Msa0223570:intron | 50.0% |
| !! | ACAGCTTGTTGGATGTGAGG+TGG | - | chr2_1:73159114-73159133 | Msa0223570:intron | 50.0% |
| TAGATCTTGTGGCGAGTCGT+TGG | - | chr2_1:73159472-73159491 | Msa0223570:intron | 50.0% | |
| GGAATCCACGCTCAATCTGA+AGG | + | chr2_1:73159510-73159529 | None:intergenic | 50.0% | |
| CAGATTGAGCGTGGATTCCA+AGG | - | chr2_1:73159511-73159530 | Msa0223570:intron | 50.0% | |
| CGTGGATTCCAAGGACAACA+TGG | - | chr2_1:73159520-73159539 | Msa0223570:intron | 50.0% | |
| CCAGGTAACCATGTTGTCCT+TGG | + | chr2_1:73159531-73159550 | None:intergenic | 50.0% | |
| CCAAGGACAACATGGTTACC+TGG | - | chr2_1:73159528-73159547 | Msa0223570:intron | 50.0% | |
| ACAAAAGAGAGGCGATGCTC+AGG | + | chr2_1:73160088-73160107 | None:intergenic | 50.0% | |
| ! | CATCGCCTCTCTTTTGTCGA+GGG | - | chr2_1:73160091-73160110 | Msa0223570:intron | 50.0% |
| GCTTGAGTCTGGATCAAAGC+AGG | - | chr2_1:73160144-73160163 | Msa0223570:intron | 50.0% | |
| ! | CAGATCGCGATTCTAGGAGC+AGG | - | chr2_1:73154949-73154968 | Msa0223570:three_prime_UTR | 55.0% |
| CCCTAAGGTCTTCTCTGCCT+TGG | - | chr2_1:73156328-73156347 | Msa0223570:CDS | 55.0% | |
| AGGTCTTCTCTGCCTTGGAC+TGG | - | chr2_1:73156333-73156352 | Msa0223570:CDS | 55.0% | |
| GGTCTTCTCTGCCTTGGACT+GGG | - | chr2_1:73156334-73156353 | Msa0223570:CDS | 55.0% | |
| !! | GCATTGGGGGACTGATTTGG+TGG | - | chr2_1:73156685-73156704 | Msa0223570:intron | 55.0% |
| GAAGAGAAACCGGCAGCATC+TGG | - | chr2_1:73156712-73156731 | Msa0223570:intron | 55.0% | |
| GCTGCACGCTAGCTGGATTA+TGG | - | chr2_1:73157530-73157549 | Msa0223570:intron | 55.0% | |
| TGTCTCCTCCAGATCACCCA+AGG | - | chr2_1:73159326-73159345 | Msa0223570:intron | 55.0% | |
| ACATGCCTTGGGTGATCTGG+AGG | + | chr2_1:73159334-73159353 | None:intergenic | 55.0% | |
| TCCAGATCACCCAAGGCATG+TGG | - | chr2_1:73159333-73159352 | Msa0223570:intron | 55.0% | |
| ACCACATGCCTTGGGTGATC+TGG | + | chr2_1:73159337-73159356 | None:intergenic | 55.0% | |
| TGGCGAGTCGTTGGCATGAA+TGG | - | chr2_1:73159481-73159500 | Msa0223570:intron | 55.0% | |
| GGAACCCTTCAGATTGAGCG+TGG | - | chr2_1:73159502-73159521 | Msa0223570:intron | 55.0% | |
| CTGACCGCCCTTCTGCAAAA+TGG | + | chr2_1:73160065-73160084 | None:intergenic | 55.0% | |
| ! | GCATCGCCTCTCTTTTGTCG+AGG | - | chr2_1:73160090-73160109 | Msa0223570:intron | 55.0% |
| TCGCACCCTCGACAAAAGAG+AGG | + | chr2_1:73160099-73160118 | None:intergenic | 55.0% | |
| TGTGCACGCGCGCAATTGTC+TGG | - | chr2_1:73156558-73156577 | Msa0223570:intron | 60.0% | |
| CTGAGCTCTGCTAGTGCCCC+TGG | - | chr2_1:73156265-73156284 | Msa0223570:intron | 65.0% | |
| AGCTCTGCTAGTGCCCCTGG+AGG | - | chr2_1:73156268-73156287 | Msa0223570:intron | 65.0% | |
| GCTCTGCTAGTGCCCCTGGA+GGG | - | chr2_1:73156269-73156288 | Msa0223570:intron | 65.0% | |
| GGGGACAGTGACCCAGTCCA+AGG | + | chr2_1:73156348-73156367 | None:intergenic | 65.0% | |
| CTGCTAGTGCCCCTGGAGGG+AGG | - | chr2_1:73156272-73156291 | Msa0223570:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 73154795 | 73160694 | 73154795 | ID=Msa0223570;Name=Msa0223570 |
| chr2_1 | mRNA | 73154795 | 73160694 | 73154795 | ID=Msa0223570-mRNA-1;Parent=Msa0223570;Name=Msa0223570-mRNA-1;_AED=0.14;_eAED=0.14;_QI=142|0.9|1|1|0.9|0.81|11|421|350 |
| chr2_1 | exon | 73154795 | 73155214 | 73154795 | ID=Msa0223570-mRNA-1:exon:21363;Parent=Msa0223570-mRNA-1 |
| chr2_1 | exon | 73155293 | 73155416 | 73155293 | ID=Msa0223570-mRNA-1:exon:21362;Parent=Msa0223570-mRNA-1 |
| chr2_1 | exon | 73155678 | 73155788 | 73155678 | ID=Msa0223570-mRNA-1:exon:21361;Parent=Msa0223570-mRNA-1 |
| chr2_1 | exon | 73155940 | 73156014 | 73155940 | ID=Msa0223570-mRNA-1:exon:21360;Parent=Msa0223570-mRNA-1 |
| chr2_1 | exon | 73156142 | 73156202 | 73156142 | ID=Msa0223570-mRNA-1:exon:21359;Parent=Msa0223570-mRNA-1 |
| chr2_1 | exon | 73156283 | 73156371 | 73156283 | ID=Msa0223570-mRNA-1:exon:21358;Parent=Msa0223570-mRNA-1 |
| chr2_1 | exon | 73156914 | 73156964 | 73156914 | ID=Msa0223570-mRNA-1:exon:21357;Parent=Msa0223570-mRNA-1 |
| chr2_1 | exon | 73157419 | 73157532 | 73157419 | ID=Msa0223570-mRNA-1:exon:21356;Parent=Msa0223570-mRNA-1 |
| chr2_1 | exon | 73157601 | 73157716 | 73157601 | ID=Msa0223570-mRNA-1:exon:21355;Parent=Msa0223570-mRNA-1 |
| chr2_1 | exon | 73158972 | 73159020 | 73158972 | ID=Msa0223570-mRNA-1:exon:21354;Parent=Msa0223570-mRNA-1 |
| chr2_1 | exon | 73160289 | 73160694 | 73160289 | ID=Msa0223570-mRNA-1:exon:21353;Parent=Msa0223570-mRNA-1 |
| chr2_1 | five_prime_UTR | 73160553 | 73160694 | 73160553 | ID=Msa0223570-mRNA-1:five_prime_utr;Parent=Msa0223570-mRNA-1 |
| chr2_1 | CDS | 73160289 | 73160552 | 73160289 | ID=Msa0223570-mRNA-1:cds;Parent=Msa0223570-mRNA-1 |
| chr2_1 | CDS | 73158972 | 73159020 | 73158972 | ID=Msa0223570-mRNA-1:cds;Parent=Msa0223570-mRNA-1 |
| chr2_1 | CDS | 73157601 | 73157716 | 73157601 | ID=Msa0223570-mRNA-1:cds;Parent=Msa0223570-mRNA-1 |
| chr2_1 | CDS | 73157419 | 73157532 | 73157419 | ID=Msa0223570-mRNA-1:cds;Parent=Msa0223570-mRNA-1 |
| chr2_1 | CDS | 73156914 | 73156964 | 73156914 | ID=Msa0223570-mRNA-1:cds;Parent=Msa0223570-mRNA-1 |
| chr2_1 | CDS | 73156283 | 73156371 | 73156283 | ID=Msa0223570-mRNA-1:cds;Parent=Msa0223570-mRNA-1 |
| chr2_1 | CDS | 73156142 | 73156202 | 73156142 | ID=Msa0223570-mRNA-1:cds;Parent=Msa0223570-mRNA-1 |
| chr2_1 | CDS | 73155940 | 73156014 | 73155940 | ID=Msa0223570-mRNA-1:cds;Parent=Msa0223570-mRNA-1 |
| chr2_1 | CDS | 73155678 | 73155788 | 73155678 | ID=Msa0223570-mRNA-1:cds;Parent=Msa0223570-mRNA-1 |
| chr2_1 | CDS | 73155294 | 73155416 | 73155294 | ID=Msa0223570-mRNA-1:cds;Parent=Msa0223570-mRNA-1 |
| chr2_1 | three_prime_UTR | 73155293 | 73155293 | 73155293 | ID=Msa0223570-mRNA-1:three_prime_utr;Parent=Msa0223570-mRNA-1 |
| chr2_1 | three_prime_UTR | 73154795 | 73155214 | 73154795 | ID=Msa0223570-mRNA-1:three_prime_utr;Parent=Msa0223570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
