AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0478870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0478870 MtrunA17_Chr3g0141721 99.265 272 2 0 1 272 1 272 0.0 550
Msa0478870 MtrunA17_Chr1g0155361 83.955 268 42 1 1 267 1 268 6.73e-171 473
Msa0478870 MtrunA17_Chr5g0404561 71.852 270 74 2 1 269 1 269 1.98e-142 400
Msa0478870 MtrunA17_Chr8g0386291 40.415 193 111 2 42 230 57 249 3.94e-41 142
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0478870 AT1G19580.1 80.297 269 52 1 1 268 1 269 1.71e-164 457
Msa0478870 AT1G47260.1 80.303 264 51 1 1 263 1 264 2.15e-163 454
Msa0478870 AT5G66510.1 67.176 262 77 3 1 261 1 254 3.75e-130 369
Msa0478870 AT5G66510.2 64.469 273 77 4 1 261 1 265 1.15e-126 361
Msa0478870 AT1G19580.2 80.447 179 34 1 1 178 1 179 9.34e-105 303
Msa0478870 AT5G63510.1 39.691 194 113 2 41 230 55 248 5.55e-42 144
Msa0478870 AT3G48680.1 38.660 194 115 2 41 230 59 252 6.14e-41 142
Msa0478870 AT5G63510.2 36.199 221 110 5 41 230 55 275 2.94e-36 130
Msa0478870 AT1G47420.1 55.814 86 24 2 1 85 1 73 4.83e-18 81.6

Find 97 sgRNAs with CRISPR-Local

Find 633 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGGAAGAGGGGTTTATTT+TGG 0.222500 3_3:+83687283 Msa0478870:three_prime_UTR
TGTGTTCTCCACTTTGGGTT+AGG 0.238845 3_3:+83687390 Msa0478870:three_prime_UTR
AAGTGTTGGCATTAGCAATT+AGG 0.272123 3_3:+83679946 Msa0478870:five_prime_UTR
TTGGAAAAGGGTCATCAATT+TGG 0.284605 3_3:+83680200 Msa0478870:CDS
AAGGTGTTGCCTACTATTAT+TGG 0.284723 3_3:+83681143 Msa0478870:CDS
TTATCAGGTAAGACATTATC+AGG 0.301201 3_3:-83687166 None:intergenic
AGGTGTTGCCTACTATTATT+GGG 0.302756 3_3:+83681144 Msa0478870:CDS
CAAACTGTGTTCTCCACTTT+GGG 0.310111 3_3:+83687385 Msa0478870:three_prime_UTR
GGAATTGATTGAAGAAGAAA+TGG 0.311067 3_3:+83679967 Msa0478870:exon
GTGTTCTCCACTTTGGGTTA+GGG 0.313928 3_3:+83687391 Msa0478870:three_prime_UTR
GAAAAGATTCAAAATGGAAT+AGG 0.326292 3_3:-83687600 None:intergenic
CTGTGCAAGGTTAGTATAAT+TGG 0.336529 3_3:-83687005 None:intergenic
CTCAAACTCAATTTCTTCAT+AGG 0.337084 3_3:-83687053 None:intergenic
CTCTATGTTGGGTGTTGTTC+GGG 0.337414 3_3:+83687120 Msa0478870:CDS
TGACTAGAAAAGATTCAAAA+TGG 0.339387 3_3:-83687606 None:intergenic
TATGGCTCCTTTCAAGTTCC+AGG 0.340667 3_3:+83687341 Msa0478870:three_prime_UTR
AAAAGATTCAAAATGGAATA+GGG 0.342772 3_3:-83687599 None:intergenic
TTAAAATATGAGTTCTTAAG+AGG 0.347679 3_3:+83687203 Msa0478870:exon
TATTATGAGCAATCGCTTCC+TGG 0.360470 3_3:-83687359 None:intergenic
GATGTTAACAGCATTAGAAT+TGG 0.385870 3_3:+83681059 Msa0478870:CDS
GGACAGTTGATTCGGAAAAC+TGG 0.385950 3_3:+83680019 Msa0478870:CDS
AAGACATCCTTATCAATAAC+AGG 0.391261 3_3:-83680139 None:intergenic
TAGTATAATTGGTGGCTGAC+TGG 0.391398 3_3:-83686994 None:intergenic
ACTCTATGTTGGGTGTTGTT+CGG 0.401232 3_3:+83687119 Msa0478870:CDS
TGATGAGATTATTATTAAAA+CGG 0.403560 3_3:+83687536 Msa0478870:three_prime_UTR
TCAAACTGTGTTCTCCACTT+TGG 0.403827 3_3:+83687384 Msa0478870:three_prime_UTR
GGTGATGTTCAGATTGGAAA+AGG 0.410207 3_3:+83680187 Msa0478870:CDS
CAAGGCTCCTGTTATTGATA+AGG 0.420602 3_3:+83680132 Msa0478870:CDS
GATGAGATTATTATTAAAAC+GGG 0.438359 3_3:+83687537 Msa0478870:three_prime_UTR
ATGGGTGCAATTCTGCTTGA+TGG 0.449196 3_3:+83681329 Msa0478870:CDS
ACAGCGTTGGACAGTTGATT+CGG 0.455958 3_3:+83680011 Msa0478870:CDS
ACATTATCCCCAATAATAGT+AGG 0.462118 3_3:-83681152 None:intergenic
TTCTTTCAAATTCATGGAAG+AGG 0.464818 3_3:+83687271 Msa0478870:three_prime_UTR
ACTCTAGCCTAGAAAACGTT+TGG 0.471680 3_3:-83687318 None:intergenic
GTTGCAAAGTCAAATTTAAG+TGG 0.474043 3_3:+83681119 Msa0478870:CDS
TTCCAATCTTGAAAACATCA+AGG 0.477826 3_3:+83687238 Msa0478870:three_prime_UTR
CGCTGTATATTGCTCTTCCG+AGG 0.481527 3_3:-83679994 None:intergenic
TGTTCTCCACTTTGGGTTAG+GGG 0.488974 3_3:+83687392 Msa0478870:three_prime_UTR
AGTATAATTGGTGGCTGACT+GGG 0.491691 3_3:-83686993 None:intergenic
GTCATTGGTGATGTTCAGAT+TGG 0.496337 3_3:+83680181 Msa0478870:CDS
GCACCAAGTGCAGCTGTCAT+TGG 0.497004 3_3:+83680166 Msa0478870:CDS
TCTTTCAAATTCATGGAAGA+GGG 0.500630 3_3:+83687272 Msa0478870:three_prime_UTR
TTGACTTTGCAACATGCACC+AGG 0.501255 3_3:-83681109 None:intergenic
CAGAATACAAAGATTCCATC+TGG 0.505231 3_3:+83681401 Msa0478870:CDS
ACATCGAAGAACAGCTCTCT+AGG 0.510020 3_3:+83680083 Msa0478870:CDS
AGCTTTCTTAGAAACTTCGC+TGG 0.514816 3_3:-83686944 None:intergenic
GAATTGATTGAAGAAGAAAT+GGG 0.516070 3_3:+83679968 Msa0478870:exon
AAAGGGTCATCAATTTGGTA+TGG 0.518770 3_3:+83680205 Msa0478870:CDS
AACAGCATTAGAATTGGAAG+TGG 0.524202 3_3:+83681065 Msa0478870:CDS
GTTCTCCACTTTGGGTTAGG+GGG 0.528626 3_3:+83687393 Msa0478870:three_prime_UTR
TCTTTGTATTCTGCCTCACA+AGG 0.530496 3_3:-83681391 None:intergenic
CATCAGAGACTGAGAGGTCG+AGG 0.534656 3_3:-83679899 None:intergenic
GATAAAAGCTATCTCTTCAT+CGG 0.540749 3_3:-83686969 None:intergenic
AAAGTCAAATTTAAGTGGGA+AGG 0.542666 3_3:+83681124 Msa0478870:CDS
TTTACATGGTTGCACTGTTG+AGG 0.545648 3_3:+83681289 Msa0478870:CDS
CAGCTGCATGGACCTGTGCA+AGG 0.546560 3_3:-83687018 None:intergenic
TGAGGAGTATGACTCTATGT+TGG 0.550229 3_3:+83687108 Msa0478870:CDS
TCCAATCTTGAAAACATCAA+GGG 0.550631 3_3:+83687239 Msa0478870:three_prime_UTR
TGGTTGCACTGTTGAGGATG+AGG 0.551311 3_3:+83681295 Msa0478870:CDS
TTGCAAAGTCAAATTTAAGT+GGG 0.554283 3_3:+83681120 Msa0478870:CDS
GTGATGTTCAGATTGGAAAA+GGG 0.560739 3_3:+83680188 Msa0478870:CDS
GAAGAAGAAATGGGAACCCT+CGG 0.561046 3_3:+83679977 Msa0478870:exon
ATCGCTTCCTGGAACTTGAA+AGG 0.562878 3_3:-83687348 None:intergenic
TTGCTGCTGGAGCCCTTGTG+AGG 0.564784 3_3:+83681378 Msa0478870:CDS
TCAGGAAGAATAAGCTCTGG+TGG 0.566098 3_3:-83687148 None:intergenic
TCACCAATGACAGCTGCACT+TGG 0.572379 3_3:-83680169 None:intergenic
TGGAAGTGGAACTAACCTAC+AGG 0.572989 3_3:+83681079 Msa0478870:CDS
CGCCTCGGTTCTCATCTCCA+AGG 0.576532 3_3:+83680055 Msa0478870:CDS
GTTCTTCGATGTAGCCACCT+TGG 0.576656 3_3:-83680072 None:intergenic
CTGAGAGGTCGAGGTAGACG+TGG 0.577266 3_3:-83679890 None:intergenic
CTTTCAAATTCATGGAAGAG+GGG 0.577553 3_3:+83687273 Msa0478870:three_prime_UTR
ATTAGACATACCTCGCCAGA+TGG 0.581701 3_3:-83681416 None:intergenic
GAGGAGTATGACTCTATGTT+GGG 0.583365 3_3:+83687109 Msa0478870:CDS
GGTCAAGCCGTTGATCGCCT+CGG 0.584423 3_3:+83680040 Msa0478870:CDS
GCTGTATATTGCTCTTCCGA+GGG 0.586697 3_3:-83679993 None:intergenic
TTATCAGGAAGAATAAGCTC+TGG 0.587187 3_3:-83687151 None:intergenic
AAAGATTCAAAATGGAATAG+GGG 0.587593 3_3:-83687598 None:intergenic
ATTGGGGATAATGTTACCGT+AGG 0.589866 3_3:+83681161 Msa0478870:CDS
ATGAGAACCGAGGCGATCAA+CGG 0.590186 3_3:-83680047 None:intergenic
TGGTATGGATCTGTATTGAG+AGG 0.599692 3_3:+83680220 Msa0478870:CDS
GAAGTATGCAACTAAAGATG+AGG 0.603345 3_3:+83687090 Msa0478870:CDS
CAATTATACTAACCTTGCAC+AGG 0.606999 3_3:+83687006 Msa0478870:CDS
GGAAGAGCAATATACAGCGT+TGG 0.610305 3_3:+83679998 Msa0478870:CDS
TAACCTACAGGATAACTCCC+TGG 0.618045 3_3:+83681091 Msa0478870:CDS
TACCCTCCTCTGAATGAAAG+GGG 0.626071 3_3:+83679857 None:intergenic
TGCAAGGTTAGTATAATTGG+TGG 0.628820 3_3:-83687002 None:intergenic
CCAATCTTGAAAACATCAAG+GGG 0.630148 3_3:+83687240 Msa0478870:three_prime_UTR
TACAAAGATTCCATCTGGCG+AGG 0.640116 3_3:+83681406 Msa0478870:CDS
GGTGTTGCCTACTATTATTG+GGG 0.645236 3_3:+83681145 Msa0478870:CDS
CTTGAGCATCAGAGACTGAG+AGG 0.647116 3_3:-83679905 None:intergenic
CTCGGTTCTCATCTCCAAGG+TGG 0.666923 3_3:+83680058 Msa0478870:CDS
CTTTGTATTCTGCCTCACAA+GGG 0.673013 3_3:-83681390 None:intergenic
TATCTTGAACATATTTGACA+AGG 0.679511 3_3:+83680114 Msa0478870:CDS
TGACTTTGCAACATGCACCA+GGG 0.689090 3_3:-83681108 None:intergenic
CACCTTGGAGATGAGAACCG+AGG 0.703858 3_3:-83680057 None:intergenic
GCACCAGGGAGTTATCCTGT+AGG 0.704606 3_3:-83681094 None:intergenic
ATGAGATTATTATTAAAACG+GGG 0.719211 3_3:+83687538 Msa0478870:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTACCAAATTTTAAAAAAA+GGG - chr3_3:83680525-83680544 None:intergenic 10.0%
!!! TATTACCAAATTTTAAAAAA+AGG - chr3_3:83680526-83680545 None:intergenic 10.0%
!!! TTTTTTTAAAATTTGGTAAT+AGG + chr3_3:83680525-83680544 Msa0478870:intron 10.0%
!!! TTTTTTAAAATTTGGTAATA+GGG + chr3_3:83680526-83680545 Msa0478870:intron 10.0%
!!! AATTTTAAGAAAAAAAACAA+CGG - chr3_3:83682177-83682196 None:intergenic 10.0%
!! TATAAAAATTCAAATGATAA+AGG + chr3_3:83683923-83683942 Msa0478870:intron 10.0%
!! TTTAACAAAATTAAAAATAG+GGG + chr3_3:83685017-83685036 Msa0478870:intron 10.0%
!! GATATGAATTTCTAAATATT+TGG + chr3_3:83680267-83680286 Msa0478870:intron 15.0%
!!! ATTACCCTTTTTTTAAAATT+TGG + chr3_3:83680518-83680537 Msa0478870:intron 15.0%
!! TATATGAAAATATGTGTTAT+AGG + chr3_3:83680637-83680656 Msa0478870:intron 15.0%
!!! TTTTTGAAAATATGTGTTAT+AGG + chr3_3:83680671-83680690 Msa0478870:intron 15.0%
!!! TTTATTCTATCTTTTGTTAT+AGG + chr3_3:83680743-83680762 Msa0478870:intron 15.0%
!!! TAGTTACTTAAGATAATTTT+AGG + chr3_3:83682026-83682045 Msa0478870:intron 15.0%
!!! AAATCTCTCATTTTAAAATT+GGG - chr3_3:83682470-83682489 None:intergenic 15.0%
!!! AAAATCTCTCATTTTAAAAT+TGG - chr3_3:83682471-83682490 None:intergenic 15.0%
!! AAGCCTAAATTTATTATTAT+AGG + chr3_3:83683734-83683753 Msa0478870:intron 15.0%
!! TGTCCTATAATAATAAATTT+AGG - chr3_3:83683740-83683759 None:intergenic 15.0%
!! TATATATTATATTAAAGCCA+TGG - chr3_3:83683765-83683784 None:intergenic 15.0%
!!! TATTATTTTATAATGGTTGT+TGG + chr3_3:83683880-83683899 Msa0478870:intron 15.0%
!!! ATTATTTTATAATGGTTGTT+GGG + chr3_3:83683881-83683900 Msa0478870:intron 15.0%
!! AAATAAAAAGAAAGATACAA+AGG - chr3_3:83684397-83684416 None:intergenic 15.0%
!! AGTTAACAAAATTGAAAATA+GGG - chr3_3:83684544-83684563 None:intergenic 15.0%
!! AAGTTAACAAAATTGAAAAT+AGG - chr3_3:83684545-83684564 None:intergenic 15.0%
!!! AAAAGTCAAAGAAATTTTTT+TGG + chr3_3:83684611-83684630 Msa0478870:intron 15.0%
!!! ATATTTTTAAATTAATGGCA+TGG - chr3_3:83684730-83684749 None:intergenic 15.0%
!! TTAACAAAATTAAAAATAGG+GGG + chr3_3:83685018-83685037 Msa0478870:intron 15.0%
!!! GAATTTTTGTTTTAAACATA+AGG - chr3_3:83685062-83685081 None:intergenic 15.0%
!!! TTATCTTTTTACTTTAGTTT+TGG - chr3_3:83686125-83686144 None:intergenic 15.0%
!! AAAACTAAAGTAAAAAGATA+AGG + chr3_3:83686124-83686143 Msa0478870:intron 15.0%
!!! TTTTTTTTCTTTCAAATTCA+TGG + chr3_3:83687265-83687284 Msa0478870:three_prime_UTR 15.0%
!! TGATGAGATTATTATTAAAA+CGG + chr3_3:83687536-83687555 Msa0478870:three_prime_UTR 15.0%
!! AATCAAATAATTGGTATGTT+TGG + chr3_3:83680313-83680332 Msa0478870:intron 20.0%
!!! AGTATAAGTGTATTTTCATA+AGG - chr3_3:83680452-83680471 None:intergenic 20.0%
!!! TGAAAGGAGTATTATAATTA+GGG - chr3_3:83680483-83680502 None:intergenic 20.0%
!!! TTGAAAGGAGTATTATAATT+AGG - chr3_3:83680484-83680503 None:intergenic 20.0%
!! TAAACACATGATAATTTGAA+AGG - chr3_3:83680499-83680518 None:intergenic 20.0%
!! TGTTATAGGATCTTATAATT+AGG + chr3_3:83680685-83680704 Msa0478870:intron 20.0%
!! GTTATAGGATCTTATAATTA+GGG + chr3_3:83680686-83680705 Msa0478870:intron 20.0%
!!! ATTTTGAAACAATGTTTTCA+TGG + chr3_3:83680909-83680928 Msa0478870:intron 20.0%
!!! TTTTGAAACAATGTTTTCAT+GGG + chr3_3:83680910-83680929 Msa0478870:intron 20.0%
!! CTATACTTAATAATTACATG+CGG + chr3_3:83680995-83681014 Msa0478870:intron 20.0%
!!! ATTCTGTTTTGTATAGTTTA+TGG + chr3_3:83681922-83681941 Msa0478870:intron 20.0%
!!! TTAGTTACTTAGATAGTTTT+AGG + chr3_3:83681977-83681996 Msa0478870:intron 20.0%
!! AAAAATATAAGAAGATTGTC+GGG - chr3_3:83682118-83682137 None:intergenic 20.0%
!! CAAAAATATAAGAAGATTGT+CGG - chr3_3:83682119-83682138 None:intergenic 20.0%
!! AATTTATCATATCTCTAAGT+TGG - chr3_3:83682394-83682413 None:intergenic 20.0%
!!! AATCTCTCATTTTAAAATTG+GGG - chr3_3:83682469-83682488 None:intergenic 20.0%
!! TTAAATGTTAATTTCCATGT+TGG - chr3_3:83682601-83682620 None:intergenic 20.0%
!!! TAGAAACTTTGAAAATAAGT+GGG - chr3_3:83682977-83682996 None:intergenic 20.0%
!! TAGCATAAAAAGAAAAATTG+AGG - chr3_3:83683113-83683132 None:intergenic 20.0%
!!! TTAAATGTTAATTTTCACGT+TGG + chr3_3:83683299-83683318 Msa0478870:intron 20.0%
!!! GAAGTGCTATTATTTTATAA+TGG + chr3_3:83683873-83683892 Msa0478870:intron 20.0%
!!! TTATTTTATAATGGTTGTTG+GGG + chr3_3:83683882-83683901 Msa0478870:intron 20.0%
!! CAAATGATAAAGGTAAAATA+TGG + chr3_3:83683933-83683952 Msa0478870:intron 20.0%
!! TGGAAAAGATCTAATAAATA+TGG + chr3_3:83684176-83684195 Msa0478870:intron 20.0%
!! TTAACAAAATTGAAAATAGG+GGG - chr3_3:83684542-83684561 None:intergenic 20.0%
!! GTTAACAAAATTGAAAATAG+GGG - chr3_3:83684543-83684562 None:intergenic 20.0%
!!! AAAGTTGGTTTTAGAAATAT+GGG - chr3_3:83684574-83684593 None:intergenic 20.0%
!!! AAAAGTTGGTTTTAGAAATA+TGG - chr3_3:83684575-83684594 None:intergenic 20.0%
!!! ATTTCTAAAACCAACTTTTT+TGG + chr3_3:83684576-83684595 Msa0478870:intron 20.0%
!!! TCTTTGACTTTTTAAATAGA+GGG - chr3_3:83684603-83684622 None:intergenic 20.0%
!!! TTCTTTGACTTTTTAAATAG+AGG - chr3_3:83684604-83684623 None:intergenic 20.0%
!!! TATTTCTAGAAACAACATTT+TGG - chr3_3:83684985-83685004 None:intergenic 20.0%
!!! AAATGTTGTTTCTAGAAATA+AGG + chr3_3:83684985-83685004 Msa0478870:intron 20.0%
!!! AATGTTGTTTCTAGAAATAA+GGG + chr3_3:83684986-83685005 Msa0478870:intron 20.0%
!! AATCATTAGAAAAGATTTAG+AGG - chr3_3:83685380-83685399 None:intergenic 20.0%
!!! TTTTCTAATGATTTCTCTAA+TGG + chr3_3:83685387-83685406 Msa0478870:intron 20.0%
!! AATAGTACATAATATAGCTT+TGG - chr3_3:83686743-83686762 None:intergenic 20.0%
!! AAAGCTATATTATGTACTAT+TGG + chr3_3:83686742-83686761 Msa0478870:intron 20.0%
!!! TTTTTTTTTTTTGTTGGTCT+AGG + chr3_3:83686806-83686825 Msa0478870:intron 20.0%
!! TTAAAATATGAGTTCTTAAG+AGG + chr3_3:83687203-83687222 Msa0478870:exon 20.0%
!! GATGAGATTATTATTAAAAC+GGG + chr3_3:83687537-83687556 Msa0478870:three_prime_UTR 20.0%
!! ATGAGATTATTATTAAAACG+GGG + chr3_3:83687538-83687557 Msa0478870:three_prime_UTR 20.0%
! GAATTGATTGAAGAAGAAAT+GGG + chr3_3:83679968-83679987 Msa0478870:exon 25.0%
! TATCTTGAACATATTTGACA+AGG + chr3_3:83680114-83680133 Msa0478870:CDS 25.0%
!! TGCTTTTGCAATCAAATAAT+TGG + chr3_3:83680304-83680323 Msa0478870:intron 25.0%
! CATATTTGAACTTGACATTA+TGG + chr3_3:83681030-83681049 Msa0478870:intron 25.0%
! TTGCAAAGTCAAATTTAAGT+GGG + chr3_3:83681120-83681139 Msa0478870:CDS 25.0%
!! TATTTTGCAAGCTTATTCTT+AGG - chr3_3:83681776-83681795 None:intergenic 25.0%
! TAAGAATAAGCTTGCAAAAT+AGG + chr3_3:83681775-83681794 Msa0478870:intron 25.0%
! TTTATGTTGCAGAAAATTCT+TGG - chr3_3:83682145-83682164 None:intergenic 25.0%
!!! ACAGTAAACAAAATTTGTTG+TGG - chr3_3:83682300-83682319 None:intergenic 25.0%
!! TGTCATATCTGTATTTTCTA+GGG - chr3_3:83682352-83682371 None:intergenic 25.0%
! GAAAAATAACACTAGAATGT+GGG - chr3_3:83682781-83682800 None:intergenic 25.0%
! AGAAAAATAACACTAGAATG+TGG - chr3_3:83682782-83682801 None:intergenic 25.0%
!! CTAGAAACTTTGAAAATAAG+TGG - chr3_3:83682978-83682997 None:intergenic 25.0%
!! TTCTAGTAGTATTTTGTTAG+AGG + chr3_3:83682992-83683011 Msa0478870:intron 25.0%
! CAATTCATTTGAATTTGCAT+CGG + chr3_3:83683080-83683099 Msa0478870:intron 25.0%
! TGCAATTAAGCCTAAAAAAA+GGG + chr3_3:83683524-83683543 Msa0478870:intron 25.0%
! GAAGCATAGAAAATTCAAAA+CGG - chr3_3:83684031-83684050 None:intergenic 25.0%
! GATTTGGATCTATTTAAGAA+AGG - chr3_3:83684069-83684088 None:intergenic 25.0%
!!! GATTTCTATGTTTTTTCTGT+TGG + chr3_3:83684156-83684175 Msa0478870:intron 25.0%
! AAAGGGATAAAATCTTTCAA+GGG - chr3_3:83684285-83684304 None:intergenic 25.0%
!! TTGAAAGATTTTATCCCTTT+GGG + chr3_3:83684285-83684304 Msa0478870:intron 25.0%
! AGTTTATAGATGACAACTAA+GGG + chr3_3:83684440-83684459 Msa0478870:intron 25.0%
!! ATTTCTCTAATGGTTTTCTT+TGG + chr3_3:83685397-83685416 Msa0478870:intron 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG - chr3_3:83685522-83685541 None:intergenic 25.0%
! AAGTAAAAAGATAAGGACTT+AGG + chr3_3:83686131-83686150 Msa0478870:intron 25.0%
! AGTAAAAAGATAAGGACTTA+GGG + chr3_3:83686132-83686151 Msa0478870:intron 25.0%
! ATTCCAATCTATAAGAACAA+GGG - chr3_3:83686568-83686587 None:intergenic 25.0%
! AATTCCAATCTATAAGAACA+AGG - chr3_3:83686569-83686588 None:intergenic 25.0%
! GTTCTTATAGATTGGAATTA+AGG + chr3_3:83686570-83686589 Msa0478870:intron 25.0%
!!! ATGTTTTAAATCCGATTATG+AGG - chr3_3:83686630-83686649 None:intergenic 25.0%
!! CGATTTTATTGTCAATTATG+AGG + chr3_3:83686663-83686682 Msa0478870:intron 25.0%
! AACATTAGAACTTTACTATC+TGG - chr3_3:83686839-83686858 None:intergenic 25.0%
!! GTAAAGTTCTAATGTTTGTT+TGG + chr3_3:83686843-83686862 Msa0478870:intron 25.0%
! AAAGATTCAAAATGGAATAG+GGG - chr3_3:83687601-83687620 None:intergenic 25.0%
! AAACAAACCTGAAAAAGTGT+TGG + chr3_3:83679932-83679951 Msa0478870:five_prime_UTR 30.0%
GGAATTGATTGAAGAAGAAA+TGG + chr3_3:83679967-83679986 Msa0478870:exon 30.0%
AAGACATCCTTATCAATAAC+AGG - chr3_3:83680142-83680161 None:intergenic 30.0%
! CTAGAGAGCATATAGAAATA+AGG - chr3_3:83680425-83680444 None:intergenic 30.0%
!! CTTATTTCTATATGCTCTCT+AGG + chr3_3:83680423-83680442 Msa0478870:intron 30.0%
TAGGATCTTATAATTAGGGA+CGG + chr3_3:83680690-83680709 Msa0478870:intron 30.0%
TCAAGTTCAAATATGATTGC+CGG - chr3_3:83681025-83681044 None:intergenic 30.0%
TTGAACTTGACATTATGGAT+AGG + chr3_3:83681035-83681054 Msa0478870:intron 30.0%
GATGTTAACAGCATTAGAAT+TGG + chr3_3:83681059-83681078 Msa0478870:CDS 30.0%
GTTGCAAAGTCAAATTTAAG+TGG + chr3_3:83681119-83681138 Msa0478870:CDS 30.0%
AAAGTCAAATTTAAGTGGGA+AGG + chr3_3:83681124-83681143 Msa0478870:CDS 30.0%
ACATTATCCCCAATAATAGT+AGG - chr3_3:83681155-83681174 None:intergenic 30.0%
TGTATAAAATTTCACTGAGC+AGG + chr3_3:83681254-83681273 Msa0478870:intron 30.0%
CAATCCTAAATCTCATTAAG+TGG - chr3_3:83681463-83681482 None:intergenic 30.0%
! ATGAGATTTAGGATTGTGTA+CGG + chr3_3:83681467-83681486 Msa0478870:intron 30.0%
! CTTCTATTCTTTGATAACAC+CGG - chr3_3:83681561-83681580 None:intergenic 30.0%
TAGCAACTATAAGACAGAAT+AGG - chr3_3:83682209-83682228 None:intergenic 30.0%
! GTCATATCTGTATTTTCTAG+GGG - chr3_3:83682351-83682370 None:intergenic 30.0%
! CTGTCATATCTGTATTTTCT+AGG - chr3_3:83682353-83682372 None:intergenic 30.0%
TTTAGACTTAATTGCACTCT+TGG + chr3_3:83682413-83682432 Msa0478870:intron 30.0%
TTAGACTTAATTGCACTCTT+GGG + chr3_3:83682414-83682433 Msa0478870:intron 30.0%
TGAAATTAGAAGGGTAAGAA+GGG - chr3_3:83683195-83683214 None:intergenic 30.0%
! TTTTCTGTCAACATACTCAT+TGG + chr3_3:83682796-83682815 Msa0478870:intron 30.0%
CGATGCAAATTCAAATGAAT+TGG - chr3_3:83683082-83683101 None:intergenic 30.0%
! TAACTAAATCGCTATTGACT+TGG + chr3_3:83683131-83683150 Msa0478870:intron 30.0%
!! AACTAAATCGCTATTGACTT+GGG + chr3_3:83683132-83683151 Msa0478870:intron 30.0%
TGAAATTAGAAGGGTAAGAA+GGG + chr3_3:83683195-83683214 Msa0478870:intron 30.0%
!!! TTTTTTGGTCAAAATGTGCA+TGG + chr3_3:83683365-83683384 Msa0478870:intron 30.0%
!! TTTTTGGTCAAAATGTGCAT+GGG + chr3_3:83683366-83683385 Msa0478870:intron 30.0%
! AAAACCGCTCATTTTAAACT+TGG + chr3_3:83683425-83683444 Msa0478870:intron 30.0%
!!! GTTTTAGAATTGTGCGATTT+TGG - chr3_3:83683454-83683473 None:intergenic 30.0%
!! AATCGCACAATTCTAAAACT+TGG + chr3_3:83683455-83683474 Msa0478870:intron 30.0%
!! ATCGCACAATTCTAAAACTT+GGG + chr3_3:83683456-83683475 Msa0478870:intron 30.0%
AATCGCACAAATGTTAAACT+TGG + chr3_3:83683490-83683509 Msa0478870:intron 30.0%
ATCGCACAAATGTTAAACTT+GGG + chr3_3:83683491-83683510 Msa0478870:intron 30.0%
GTGCAATTAAGCCTAAAAAA+AGG + chr3_3:83683523-83683542 Msa0478870:intron 30.0%
TCTTGTGTAAAAATAGGGTA+AGG - chr3_3:83683624-83683643 None:intergenic 30.0%
!!! TTACCCTATTTTTACACAAG+AGG + chr3_3:83683623-83683642 Msa0478870:intron 30.0%
TATTATTATAGGACATGCCA+TGG + chr3_3:83683745-83683764 Msa0478870:intron 30.0%
AGAAAGGTGAAGATTTAACA+AGG - chr3_3:83684053-83684072 None:intergenic 30.0%
TCTTAAATAGATCCAAATCC+AGG + chr3_3:83684070-83684089 Msa0478870:intron 30.0%
AACTCAAGAGTGAAGATTTA+GGG - chr3_3:83684097-83684116 None:intergenic 30.0%
ATGGATGATGATCTTTATCA+AGG + chr3_3:83684215-83684234 Msa0478870:intron 30.0%
CAAAGGGATAAAATCTTTCA+AGG - chr3_3:83684286-83684305 None:intergenic 30.0%
! CTTGAAAGATTTTATCCCTT+TGG + chr3_3:83684284-83684303 Msa0478870:intron 30.0%
TTGTCAGAAAAAAACCCAAA+GGG - chr3_3:83684302-83684321 None:intergenic 30.0%
! TTCTGACAAGGTTTTTAATG+AGG + chr3_3:83684313-83684332 Msa0478870:intron 30.0%
CAGTTTATAGATGACAACTA+AGG + chr3_3:83684439-83684458 Msa0478870:intron 30.0%
GTTTATAGATGACAACTAAG+GGG + chr3_3:83684441-83684460 Msa0478870:intron 30.0%
TTAATGATATGAATCCTACG+TGG + chr3_3:83684667-83684686 Msa0478870:intron 30.0%
TGTTGTTGTACTGTTATAGA+AGG - chr3_3:83685261-83685280 None:intergenic 30.0%
GTTCTATCAAAGACCATATT+TGG + chr3_3:83685340-83685359 Msa0478870:intron 30.0%
! TCTACCAACTTTTCTACTAT+AGG + chr3_3:83685526-83685545 Msa0478870:intron 30.0%
TTACACGGTTTAGATATCTT+GGG - chr3_3:83685858-83685877 None:intergenic 30.0%
ATATCTAAACCGTGTAACTT+GGG + chr3_3:83685861-83685880 Msa0478870:intron 30.0%
TGGAATGTAACTTCAGTAAA+AGG - chr3_3:83685933-83685952 None:intergenic 30.0%
!!! TTTAGTTTTGGATGTACTGA+CGG - chr3_3:83686113-83686132 None:intergenic 30.0%
TATTGTTATGGGAAAATCTC+CGG + chr3_3:83686174-83686193 Msa0478870:intron 30.0%
!!! AGTTTTCATTGATTTGGAGA+AGG - chr3_3:83686332-83686351 None:intergenic 30.0%
!! GCACTTAGTTTTCATTGATT+TGG - chr3_3:83686338-83686357 None:intergenic 30.0%
TATCATGAAGTTATGGGAAA+GGG - chr3_3:83686497-83686516 None:intergenic 30.0%
ATATCATGAAGTTATGGGAA+AGG - chr3_3:83686498-83686517 None:intergenic 30.0%
GAGTCATATCATGAAGTTAT+GGG - chr3_3:83686503-83686522 None:intergenic 30.0%
TGAGTCATATCATGAAGTTA+TGG - chr3_3:83686504-83686523 None:intergenic 30.0%
TTCCAATCTATAAGAACAAG+GGG - chr3_3:83686567-83686586 None:intergenic 30.0%
! ATTTTCTTCGTCCTCATAAT+CGG + chr3_3:83686616-83686635 Msa0478870:intron 30.0%
AATTCCATGACAACATTCAA+AGG - chr3_3:83686693-83686712 None:intergenic 30.0%
TTGTCATGGAATTTATCACA+TGG + chr3_3:83686700-83686719 Msa0478870:intron 30.0%
! TGTAAACTTGCATATTTTGC+AGG + chr3_3:83686907-83686926 Msa0478870:intron 30.0%
GATAAAAGCTATCTCTTCAT+CGG - chr3_3:83686972-83686991 None:intergenic 30.0%
CTCAAACTCAATTTCTTCAT+AGG - chr3_3:83687056-83687075 None:intergenic 30.0%
TTATCAGGTAAGACATTATC+AGG - chr3_3:83687169-83687188 None:intergenic 30.0%
!!! AGAGCTTTTTTTGCTTTATC+AGG - chr3_3:83687184-83687203 None:intergenic 30.0%
TTCCAATCTTGAAAACATCA+AGG + chr3_3:83687238-83687257 Msa0478870:three_prime_UTR 30.0%
TCCAATCTTGAAAACATCAA+GGG + chr3_3:83687239-83687258 Msa0478870:three_prime_UTR 30.0%
TTCTTTCAAATTCATGGAAG+AGG + chr3_3:83687271-83687290 Msa0478870:three_prime_UTR 30.0%
TCTTTCAAATTCATGGAAGA+GGG + chr3_3:83687272-83687291 Msa0478870:three_prime_UTR 30.0%
! AATAACACCAAACGTTTTCT+AGG + chr3_3:83687311-83687330 Msa0478870:three_prime_UTR 30.0%
!! AAGTGTTGGCATTAGCAATT+AGG + chr3_3:83679946-83679965 Msa0478870:five_prime_UTR 35.0%
GTGATGTTCAGATTGGAAAA+GGG + chr3_3:83680188-83680207 Msa0478870:CDS 35.0%
TTGGAAAAGGGTCATCAATT+TGG + chr3_3:83680200-83680219 Msa0478870:CDS 35.0%
AAAGGGTCATCAATTTGGTA+TGG + chr3_3:83680205-83680224 Msa0478870:CDS 35.0%
! CAGGGTCTTATAAATAAGGA+CGG + chr3_3:83680610-83680629 Msa0478870:intron 35.0%
AATAATTACATGCGGCAAAC+CGG + chr3_3:83681003-83681022 Msa0478870:intron 35.0%
AACAGCATTAGAATTGGAAG+TGG + chr3_3:83681065-83681084 Msa0478870:CDS 35.0%
!! AAGGTGTTGCCTACTATTAT+TGG + chr3_3:83681143-83681162 Msa0478870:CDS 35.0%
! AGGTGTTGCCTACTATTATT+GGG + chr3_3:83681144-83681163 Msa0478870:CDS 35.0%
AATTGTTGATCGTGGCAAAA+AGG - chr3_3:83681194-83681213 None:intergenic 35.0%
ATGTAGCAAATTGTTGATCG+TGG - chr3_3:83681202-83681221 None:intergenic 35.0%
CAGAATACAAAGATTCCATC+TGG + chr3_3:83681401-83681420 Msa0478870:CDS 35.0%
TAATTTGGCTGTAAACTGTC+TGG + chr3_3:83681435-83681454 Msa0478870:intron 35.0%
GGTACCACTTAATGAGATTT+AGG + chr3_3:83681456-83681475 Msa0478870:intron 35.0%
AGAAAGAAAGCAGATAGAGA+TGG + chr3_3:83681585-83681604 Msa0478870:intron 35.0%
TACGAGATAGAGAATGATGA+TGG + chr3_3:83681635-83681654 Msa0478870:intron 35.0%
ACGAGATAGAGAATGATGAT+GGG + chr3_3:83681636-83681655 Msa0478870:intron 35.0%
AACTGTTTGACAGTTGTGAA+AGG - chr3_3:83681700-83681719 None:intergenic 35.0%
TTGCAAGCTTATTCTTAGGA+GGG - chr3_3:83681772-83681791 None:intergenic 35.0%
TTTGCAAGCTTATTCTTAGG+AGG - chr3_3:83681773-83681792 None:intergenic 35.0%
GAATAAGCTTGCAAAATAGG+AGG + chr3_3:83681778-83681797 Msa0478870:intron 35.0%
AGACTAACATGTACAGTGTT+AGG - chr3_3:83681825-83681844 None:intergenic 35.0%
!! ACAAAATTTGTTGTGGCTGT+AGG - chr3_3:83682293-83682312 None:intergenic 35.0%
ATCGCACAATTGTGAAACTT+GGG - chr3_3:83682442-83682461 None:intergenic 35.0%
AATCGCACAATTGTGAAACT+TGG - chr3_3:83682443-83682462 None:intergenic 35.0%
AGTTTCACAATTGTGCGATT+TGG + chr3_3:83682443-83682462 Msa0478870:intron 35.0%
TTATTTGGTCAAAATGCGCA+TGG - chr3_3:83682533-83682552 None:intergenic 35.0%
GTGAAATTAGAAGGGTAAGA+AGG - chr3_3:83683194-83683213 None:intergenic 35.0%
TCCATTGGGTGAAATTAGAA+GGG - chr3_3:83682698-83682717 None:intergenic 35.0%
TTCCATTGGGTGAAATTAGA+AGG - chr3_3:83682699-83682718 None:intergenic 35.0%
TTGCACACGGTGTAAATTTA+AGG - chr3_3:83682906-83682925 None:intergenic 35.0%
AACAAGTGAAAACTTGCACA+CGG - chr3_3:83682919-83682938 None:intergenic 35.0%
GTGAAATTAGAAGGGTAAGA+AGG + chr3_3:83683194-83683213 Msa0478870:intron 35.0%
! TTTTGGTCAAAATGTGCATG+GGG + chr3_3:83683367-83683386 Msa0478870:intron 35.0%
! TGGGGATTAGTAAATGCAAA+AGG + chr3_3:83683385-83683404 Msa0478870:intron 35.0%
! GGGGATTAGTAAATGCAAAA+GGG + chr3_3:83683386-83683405 Msa0478870:intron 35.0%
! GGGATTAGTAAATGCAAAAG+GGG + chr3_3:83683387-83683406 Msa0478870:intron 35.0%
!! TCGCACAATTCTAAAACTTG+GGG + chr3_3:83683457-83683476 Msa0478870:intron 35.0%
TCGCACAAATGTTAAACTTG+GGG + chr3_3:83683492-83683511 Msa0478870:intron 35.0%
CAGCCTCTTGTGTAAAAATA+GGG - chr3_3:83683629-83683648 None:intergenic 35.0%
ACAGCCTCTTGTGTAAAAAT+AGG - chr3_3:83683630-83683649 None:intergenic 35.0%
! AGGCTTAATTGCACTTTTGA+GGG - chr3_3:83683517-83683536 None:intergenic 35.0%
! TAGGCTTAATTGCACTTTTG+AGG - chr3_3:83683518-83683537 None:intergenic 35.0%
! TGGGGTATTCTCATCTATTT+AGG + chr3_3:83683900-83683919 Msa0478870:intron 35.0%
CAACTCAAGAGTGAAGATTT+AGG - chr3_3:83684098-83684117 None:intergenic 35.0%
! AAAGAGTACAGAGCAAACAA+CGG - chr3_3:83684260-83684279 None:intergenic 35.0%
CTTGTCAGAAAAAAACCCAA+AGG - chr3_3:83684303-83684322 None:intergenic 35.0%
!!! CTTTGGGTTTTTTTCTGACA+AGG + chr3_3:83684301-83684320 Msa0478870:intron 35.0%
!! AAAGATACAAAGGCACTTGA+GGG - chr3_3:83684387-83684406 None:intergenic 35.0%
AATAGAGGGACCAAAAAAGT+TGG - chr3_3:83684589-83684608 None:intergenic 35.0%
ATGATGGTACCATATTAGCA+AGG - chr3_3:83684693-83684712 None:intergenic 35.0%
AAATTAATGGCATGGAAACG+AGG - chr3_3:83684722-83684741 None:intergenic 35.0%
ACAAATGAAGAACCCTAACT+TGG + chr3_3:83684808-83684827 Msa0478870:intron 35.0%
ATTACCACGTCATCAATTTG+GGG - chr3_3:83684840-83684859 None:intergenic 35.0%
CATTACCACGTCATCAATTT+GGG - chr3_3:83684841-83684860 None:intergenic 35.0%
TCATTACCACGTCATCAATT+TGG - chr3_3:83684842-83684861 None:intergenic 35.0%
!! AAATTGATGACGTGGTAATG+AGG + chr3_3:83684841-83684860 Msa0478870:intron 35.0%
! AGAAAGTCAGCGGAAATTTT+TGG - chr3_3:83684952-83684971 None:intergenic 35.0%
!! TTTCCGCTGACTTTCTAAAT+AGG + chr3_3:83684956-83684975 Msa0478870:intron 35.0%
!! TTCCGCTGACTTTCTAAATA+GGG + chr3_3:83684957-83684976 Msa0478870:intron 35.0%
ATGACTTATTGATCCAATGG+TGG - chr3_3:83685117-83685136 None:intergenic 35.0%
GGTATGACTTATTGATCCAA+TGG - chr3_3:83685120-83685139 None:intergenic 35.0%
CATCAAATCGCAATTGATCT+AGG - chr3_3:83685141-83685160 None:intergenic 35.0%
!! GATGTGACTTGTTGATTCAA+CGG + chr3_3:83685157-83685176 Msa0478870:intron 35.0%
GTAGAAAACAAACTTGTGCA+TGG + chr3_3:83685179-83685198 Msa0478870:intron 35.0%
TGGTCTTTGATAGAACACTA+TGG - chr3_3:83685336-83685355 None:intergenic 35.0%
! CAATGAGTTGGATCCAAATA+TGG - chr3_3:83685356-83685375 None:intergenic 35.0%
AGATTTAGAGGTCAATGAGT+TGG - chr3_3:83685368-83685387 None:intergenic 35.0%
AGTCAAGTTAAAAGAGGTAG+AGG - chr3_3:83685427-83685446 None:intergenic 35.0%
AAGAAGAGTAGATCAAATGG+AGG - chr3_3:83685452-83685471 None:intergenic 35.0%
GGTAAGAAGAGTAGATCAAA+TGG - chr3_3:83685455-83685474 None:intergenic 35.0%
TTGATCTACTCTTCTTACCA+CGG + chr3_3:83685456-83685475 Msa0478870:intron 35.0%
GAAAATAGGCTTAGATGGTT+TGG - chr3_3:83685508-83685527 None:intergenic 35.0%
TGGTAGAAAATAGGCTTAGA+TGG - chr3_3:83685513-83685532 None:intergenic 35.0%
AGCACCTATAGTAGAAAAGT+TGG - chr3_3:83685533-83685552 None:intergenic 35.0%
AGACTAGACATGATAGGATT+AGG - chr3_3:83685585-83685604 None:intergenic 35.0%
AGCTGAAAGGAAAGTTCTAT+CGG - chr3_3:83685720-83685739 None:intergenic 35.0%
AACTTTCCTTTCAGCTTAAG+TGG + chr3_3:83685724-83685743 Msa0478870:intron 35.0%
! AAAGTACCACTTAAGCTGAA+AGG - chr3_3:83685733-83685752 None:intergenic 35.0%
TACATCATCGTATTCAAGCT+GGG - chr3_3:83685798-83685817 None:intergenic 35.0%
!! TTCTCCGTCATTTTGTACTA+TGG + chr3_3:83685831-83685850 Msa0478870:intron 35.0%
GTTACACGGTTTAGATATCT+TGG - chr3_3:83685859-83685878 None:intergenic 35.0%
GATATCTAAACCGTGTAACT+TGG + chr3_3:83685860-83685879 Msa0478870:intron 35.0%
TATCTAAACCGTGTAACTTG+GGG + chr3_3:83685862-83685881 Msa0478870:intron 35.0%
ATATCATACCCCAAGTTACA+CGG - chr3_3:83685873-83685892 None:intergenic 35.0%
ACTTCAGTAAAAGGAGAAGT+GGG - chr3_3:83685924-83685943 None:intergenic 35.0%
AACTTCAGTAAAAGGAGAAG+TGG - chr3_3:83685925-83685944 None:intergenic 35.0%
! GGAGATTTTCCCATAACAAT+AGG - chr3_3:83686175-83686194 None:intergenic 35.0%
!! ATCCTGGATAGCTCTAATAT+AGG + chr3_3:83686243-83686262 Msa0478870:intron 35.0%
!!! ACCAATTTGGTTTTATGCCT+GGG - chr3_3:83686432-83686451 None:intergenic 35.0%
!!! AACCAATTTGGTTTTATGCC+TGG - chr3_3:83686433-83686452 None:intergenic 35.0%
AAGAAAAGAGACTCACGTTA+CGG - chr3_3:83686458-83686477 None:intergenic 35.0%
ACAAGATTGCGCGAATTATA+GGG - chr3_3:83686539-83686558 None:intergenic 35.0%
TACAAGATTGCGCGAATTAT+AGG - chr3_3:83686540-83686559 None:intergenic 35.0%
TCCAATCTATAAGAACAAGG+GGG - chr3_3:83686566-83686585 None:intergenic 35.0%
CATGGAATTTATCACATGGT+TGG + chr3_3:83686704-83686723 Msa0478870:intron 35.0%
!! ATAGCTTTGGTCTAGCAATT+GGG - chr3_3:83686730-83686749 None:intergenic 35.0%
!! TATAGCTTTGGTCTAGCAAT+TGG - chr3_3:83686731-83686750 None:intergenic 35.0%
TTAGAACTTTACTATCTGGC+TGG - chr3_3:83686835-83686854 None:intergenic 35.0%
! ACTTGCATATTTTGCAGGTT+TGG + chr3_3:83686912-83686931 Msa0478870:intron 35.0%
! CTTGCATATTTTGCAGGTTT+GGG + chr3_3:83686913-83686932 Msa0478870:intron 35.0%
TGCAAGGTTAGTATAATTGG+TGG - chr3_3:83687005-83687024 None:intergenic 35.0%
CTGTGCAAGGTTAGTATAAT+TGG - chr3_3:83687008-83687027 None:intergenic 35.0%
CAATTATACTAACCTTGCAC+AGG + chr3_3:83687006-83687025 Msa0478870:CDS 35.0%
! ACTTTGAATTTTCAGCTGCA+TGG - chr3_3:83687033-83687052 None:intergenic 35.0%
GAAGTATGCAACTAAAGATG+AGG + chr3_3:83687090-83687109 Msa0478870:CDS 35.0%
TTATCAGGAAGAATAAGCTC+TGG - chr3_3:83687154-83687173 None:intergenic 35.0%
CCAATCTTGAAAACATCAAG+GGG + chr3_3:83687240-83687259 Msa0478870:three_prime_UTR 35.0%
CTTTCAAATTCATGGAAGAG+GGG + chr3_3:83687273-83687292 Msa0478870:three_prime_UTR 35.0%
ATCCACACTCAACAAAAACA+CGG - chr3_3:83687573-83687592 None:intergenic 35.0%
!!! GCTAATGCCAACACTTTTTC+AGG - chr3_3:83679942-83679961 None:intergenic 40.0%
CAAGGCTCCTGTTATTGATA+AGG + chr3_3:83680132-83680151 Msa0478870:CDS 40.0%
!! GTCATTGGTGATGTTCAGAT+TGG + chr3_3:83680181-83680200 Msa0478870:CDS 40.0%
GGTGATGTTCAGATTGGAAA+AGG + chr3_3:83680187-83680206 Msa0478870:CDS 40.0%
TGGTATGGATCTGTATTGAG+AGG + chr3_3:83680220-83680239 Msa0478870:CDS 40.0%
TGGATCTGTATTGAGAGGTA+AGG + chr3_3:83680225-83680244 Msa0478870:intron 40.0%
GGATCTGTATTGAGAGGTAA+GGG + chr3_3:83680226-83680245 Msa0478870:intron 40.0%
! GTCGCAGGGTCTTATAAATA+AGG + chr3_3:83680606-83680625 Msa0478870:intron 40.0%
GATCTTATAATTAGGGACGG+AGG + chr3_3:83680693-83680712 Msa0478870:intron 40.0%
! GGTGTTGCCTACTATTATTG+GGG + chr3_3:83681145-83681164 Msa0478870:CDS 40.0%
ATTGGGGATAATGTTACCGT+AGG + chr3_3:83681161-83681180 Msa0478870:CDS 40.0%
!!! GGTCATAGTGCTGTTTTACA+TGG + chr3_3:83681275-83681294 Msa0478870:intron 40.0%
TTTACATGGTTGCACTGTTG+AGG + chr3_3:83681289-83681308 Msa0478870:CDS 40.0%
! GATGAGGCTTTTGTTGGTAT+GGG + chr3_3:83681311-83681330 Msa0478870:CDS 40.0%
CGTCGTTGAGAAAAATGCTA+TGG + chr3_3:83681355-83681374 Msa0478870:CDS 40.0%
AAAAATGCTATGGTTGCTGC+TGG + chr3_3:83681365-83681384 Msa0478870:CDS 40.0%
CTTTGTATTCTGCCTCACAA+GGG - chr3_3:83681393-83681412 None:intergenic 40.0%
TCTTTGTATTCTGCCTCACA+AGG - chr3_3:83681394-83681413 None:intergenic 40.0%
GATTGTGTACGGTATAGTAG+AGG + chr3_3:83681478-83681497 Msa0478870:intron 40.0%
AAAGCAGATAGAGATGGAGA+AGG + chr3_3:83681591-83681610 Msa0478870:intron 40.0%
ACATACTACACTGTCAGTCT+AGG + chr3_3:83681881-83681900 Msa0478870:intron 40.0%
! TTACTGTGAGAGTATGACTG+TGG + chr3_3:83682313-83682332 Msa0478870:intron 40.0%
TCGCACAATTGTGAAACTTG+GGG - chr3_3:83682441-83682460 None:intergenic 40.0%
GCAAAGGAGGATAAAGTTGA+GGG - chr3_3:83682497-83682516 None:intergenic 40.0%
TGCAAAGGAGGATAAAGTTG+AGG - chr3_3:83682498-83682517 None:intergenic 40.0%
! AGGACTAGTAAATGCAAAGG+AGG - chr3_3:83682510-83682529 None:intergenic 40.0%
! TGGAGGACTAGTAAATGCAA+AGG - chr3_3:83682513-83682532 None:intergenic 40.0%
! GGGAGTGTGAGAGTAAAAAT+AGG - chr3_3:83682669-83682688 None:intergenic 40.0%
ACCCTTCTAATTTCACCCAA+TGG + chr3_3:83682694-83682713 Msa0478870:intron 40.0%
TCAACATACTCATTGGCGAT+GGG + chr3_3:83682803-83682822 Msa0478870:intron 40.0%
!! TGATGGTGGGTGAAATTAGA+AGG + chr3_3:83683185-83683204 Msa0478870:intron 40.0%
!! GATGGTGGGTGAAATTAGAA+GGG + chr3_3:83683186-83683205 Msa0478870:intron 40.0%
AGTGTGAGAGTGAGAAAGAA+TGG + chr3_3:83683218-83683237 Msa0478870:intron 40.0%
GAAAGAATGGAGGTTTGATG+TGG + chr3_3:83683231-83683250 Msa0478870:intron 40.0%
TTTGATGTGGAGGTTGAAAG+AGG + chr3_3:83683244-83683263 Msa0478870:intron 40.0%
AGGTTGAAAGAGGAAGGAAA+AGG + chr3_3:83683254-83683273 Msa0478870:intron 40.0%
TTGAAAGAGGAAGGAAAAGG+AGG + chr3_3:83683257-83683276 Msa0478870:intron 40.0%
ATGCAAAAGGGGTAATGTTG+AGG + chr3_3:83683398-83683417 Msa0478870:intron 40.0%
TGCAAAAGGGGTAATGTTGA+GGG + chr3_3:83683399-83683418 Msa0478870:intron 40.0%
! ACCGCTCATTTTAAACTTGG+TGG + chr3_3:83683428-83683447 Msa0478870:intron 40.0%
! GCCACCAAGTTTAAAATGAG+CGG - chr3_3:83683432-83683451 None:intergenic 40.0%
!! CGCACAATTCTAAAACTTGG+GGG + chr3_3:83683458-83683477 Msa0478870:intron 40.0%
!! GCACAATTCTAAAACTTGGG+GGG + chr3_3:83683459-83683478 Msa0478870:intron 40.0%
CGCACAAATGTTAAACTTGG+GGG + chr3_3:83683493-83683512 Msa0478870:intron 40.0%
GCACAAATGTTAAACTTGGG+GGG + chr3_3:83683494-83683513 Msa0478870:intron 40.0%
CGTACAATACACCAAATGGT+GGG - chr3_3:83683598-83683617 None:intergenic 40.0%
GTTGTTGTCATGTGACTGTA+AGG - chr3_3:83683674-83683693 None:intergenic 40.0%
! GGCTTAATTGCACTTTTGAG+GGG - chr3_3:83683719-83683738 None:intergenic 40.0%
AAATATGGTGAAATGCAGCC+AGG + chr3_3:83683948-83683967 Msa0478870:intron 40.0%
TGTATCCATGCCATACACTT+TGG - chr3_3:83683979-83683998 None:intergenic 40.0%
AACGGTAGTTGTACTCATGT+TGG - chr3_3:83684013-83684032 None:intergenic 40.0%
AAGATTTAGGGACCTGGATT+TGG - chr3_3:83684085-83684104 None:intergenic 40.0%
! ATCTTCACTCTTGAGTTGCA+TGG + chr3_3:83684100-83684119 Msa0478870:intron 40.0%
TTGTGAAAAGACGCAAAAGC+AGG - chr3_3:83684136-83684155 None:intergenic 40.0%
ACAACGGAAACAACAAGGAA+GGG - chr3_3:83684244-83684263 None:intergenic 40.0%
AACAACGGAAACAACAAGGA+AGG - chr3_3:83684245-83684264 None:intergenic 40.0%
AGCAAACAACGGAAACAACA+AGG - chr3_3:83684249-83684268 None:intergenic 40.0%
CCAGAATAACCAAGGAAACT+TGG - chr3_3:83684345-83684364 None:intergenic 40.0%
CCAAGTTTCCTTGGTTATTC+TGG + chr3_3:83684342-83684361 Msa0478870:intron 40.0%
! TTTCCTTGGTTATTCTGGCT+TGG + chr3_3:83684347-83684366 Msa0478870:intron 40.0%
!! TTCCTTGGTTATTCTGGCTT+GGG + chr3_3:83684348-83684367 Msa0478870:intron 40.0%
!! AAGATACAAAGGCACTTGAG+GGG - chr3_3:83684386-83684405 None:intergenic 40.0%
!! GAAAGATACAAAGGCACTTG+AGG - chr3_3:83684388-83684407 None:intergenic 40.0%
!! TAAGGGGTACCAACATAGTT+GGG + chr3_3:83684457-83684476 Msa0478870:intron 40.0%
! CTAAACAGAAAAGAGTGCAG+AGG - chr3_3:83684499-83684518 None:intergenic 40.0%
! CTCTGCACTCTTTTCTGTTT+AGG + chr3_3:83684497-83684516 Msa0478870:intron 40.0%
! TTGGGGATTTTGCCAAGTTA+GGG - chr3_3:83684823-83684842 None:intergenic 40.0%
! TTTGGGGATTTTGCCAAGTT+AGG - chr3_3:83684824-83684843 None:intergenic 40.0%
!! AAATCCCCAAATTGATGACG+TGG + chr3_3:83684833-83684852 Msa0478870:intron 40.0%
CCTATGTGACATTGCTTACA+TGG - chr3_3:83684882-83684901 None:intergenic 40.0%
CCATGTAAGCAATGTCACAT+AGG + chr3_3:83684879-83684898 Msa0478870:intron 40.0%
!! TTTTTGGTACCCCTTCACTT+TGG - chr3_3:83684936-83684955 None:intergenic 40.0%
!! TCCGCTGACTTTCTAAATAG+GGG + chr3_3:83684958-83684977 Msa0478870:intron 40.0%
TCCCCTATTTAGAAAGTCAG+CGG - chr3_3:83684962-83684981 None:intergenic 40.0%
! CACAAACTTGTTTCCACCAT+TGG + chr3_3:83685101-83685120 Msa0478870:intron 40.0%
CAAACCTTATCCCACTAAGT+GGG + chr3_3:83685286-83685305 Msa0478870:intron 40.0%
AAACCTTATCCCACTAAGTG+GGG + chr3_3:83685287-83685306 Msa0478870:intron 40.0%
GAGGAGAGTCAAGTTAAAAG+AGG - chr3_3:83685433-83685452 None:intergenic 40.0%
ACATCATTAGAGAGAGAGTG+GGG - chr3_3:83685558-83685577 None:intergenic 40.0%
GACATCATTAGAGAGAGAGT+GGG - chr3_3:83685559-83685578 None:intergenic 40.0%
TGACATCATTAGAGAGAGAG+TGG - chr3_3:83685560-83685579 None:intergenic 40.0%
GTGGTAAGACTAGACATGAT+AGG - chr3_3:83685591-83685610 None:intergenic 40.0%
GTACATCATCGTATTCAAGC+TGG - chr3_3:83685799-83685818 None:intergenic 40.0%
GGGTCCATAGTACAAAATGA+CGG - chr3_3:83685838-83685857 None:intergenic 40.0%
ATCTCCAACTTTCACCTCTA+AGG + chr3_3:83685894-83685913 Msa0478870:intron 40.0%
TCTACCTTAGAGGTGAAAGT+TGG - chr3_3:83685901-83685920 None:intergenic 40.0%
TAGAAGCAAGACGGAGTATA+TGG - chr3_3:83685953-83685972 None:intergenic 40.0%
TACATCTCGATGCTAACTCT+TGG + chr3_3:83686080-83686099 Msa0478870:intron 40.0%
TAACAATAGGACTGCACCAA+GGG - chr3_3:83686162-83686181 None:intergenic 40.0%
ATAACAATAGGACTGCACCA+AGG - chr3_3:83686163-83686182 None:intergenic 40.0%
TTGGTGCAGTCCTATTGTTA+TGG + chr3_3:83686162-83686181 Msa0478870:intron 40.0%
TGGTGCAGTCCTATTGTTAT+GGG + chr3_3:83686163-83686182 Msa0478870:intron 40.0%
TATCCAGGATATGTATGAGG+GGG - chr3_3:83686233-83686252 None:intergenic 40.0%
CTATCCAGGATATGTATGAG+GGG - chr3_3:83686234-83686253 None:intergenic 40.0%
GCTATCCAGGATATGTATGA+GGG - chr3_3:83686235-83686254 None:intergenic 40.0%
AGCTATCCAGGATATGTATG+AGG - chr3_3:83686236-83686255 None:intergenic 40.0%
TGCCTATATTAGAGCTATCC+AGG - chr3_3:83686248-83686267 None:intergenic 40.0%
! AGAGATTTTGTGGAAAGCCT+TGG - chr3_3:83686290-83686309 None:intergenic 40.0%
GCTTTCCACAAAATCTCTCT+AGG + chr3_3:83686292-83686311 Msa0478870:intron 40.0%
! GAGTACCTAGAGAGATTTTG+TGG - chr3_3:83686300-83686319 None:intergenic 40.0%
!!! GCAAGTCTTTTTTATCCGTC+CGG + chr3_3:83686356-83686375 Msa0478870:intron 40.0%
!!! AATTTGGTTTTATGCCTGGG+AGG - chr3_3:83686429-83686448 None:intergenic 40.0%
TCCCAGGCATAAAACCAAAT+TGG + chr3_3:83686428-83686447 Msa0478870:intron 40.0%
CACGTTACGGATAACCAATT+TGG - chr3_3:83686445-83686464 None:intergenic 40.0%
CAAGATTGCGCGAATTATAG+GGG - chr3_3:83686538-83686557 None:intergenic 40.0%
TCCCCCTTGTTCTTATAGAT+TGG + chr3_3:83686562-83686581 Msa0478870:intron 40.0%
! CTCTTCTTGAGTACTTGCTA+CGG + chr3_3:83686869-83686888 Msa0478870:intron 40.0%
AGCTTTCTTAGAAACTTCGC+TGG - chr3_3:83686947-83686966 None:intergenic 40.0%
! AGTATAATTGGTGGCTGACT+GGG - chr3_3:83686996-83687015 None:intergenic 40.0%
! TAGTATAATTGGTGGCTGAC+TGG - chr3_3:83686997-83687016 None:intergenic 40.0%
! TGAGGAGTATGACTCTATGT+TGG + chr3_3:83687108-83687127 Msa0478870:CDS 40.0%
! GAGGAGTATGACTCTATGTT+GGG + chr3_3:83687109-83687128 Msa0478870:CDS 40.0%
!! ACTCTATGTTGGGTGTTGTT+CGG + chr3_3:83687119-83687138 Msa0478870:CDS 40.0%
!! CCCCTTGATGTTTTCAAGAT+TGG - chr3_3:83687243-83687262 None:intergenic 40.0%
! CATGGAAGAGGGGTTTATTT+TGG + chr3_3:83687283-83687302 Msa0478870:three_prime_UTR 40.0%
ACTCTAGCCTAGAAAACGTT+TGG - chr3_3:83687321-83687340 None:intergenic 40.0%
! CGTTTTCTAGGCTAGAGTTA+TGG + chr3_3:83687323-83687342 Msa0478870:three_prime_UTR 40.0%
TATTATGAGCAATCGCTTCC+TGG - chr3_3:83687362-83687381 None:intergenic 40.0%
TCAAACTGTGTTCTCCACTT+TGG + chr3_3:83687384-83687403 Msa0478870:three_prime_UTR 40.0%
CAAACTGTGTTCTCCACTTT+GGG + chr3_3:83687385-83687404 Msa0478870:three_prime_UTR 40.0%
!! AACCGTGTTTTTGTTGAGTG+TGG + chr3_3:83687568-83687587 Msa0478870:three_prime_UTR 40.0%
GAAGAAGAAATGGGAACCCT+CGG + chr3_3:83679977-83679996 Msa0478870:exon 45.0%
GCTGTATATTGCTCTTCCGA+GGG - chr3_3:83679996-83680015 None:intergenic 45.0%
GGAAGAGCAATATACAGCGT+TGG + chr3_3:83679998-83680017 Msa0478870:CDS 45.0%
! ACAGCGTTGGACAGTTGATT+CGG + chr3_3:83680011-83680030 Msa0478870:CDS 45.0%
!! GGACAGTTGATTCGGAAAAC+TGG + chr3_3:83680019-83680038 Msa0478870:CDS 45.0%
ACATCGAAGAACAGCTCTCT+AGG + chr3_3:83680083-83680102 Msa0478870:CDS 45.0%
ATGTGCGTAAAATGTGTCGC+AGG + chr3_3:83680591-83680610 Msa0478870:intron 45.0%
TGTGCGTAAAATGTGTCGCA+GGG + chr3_3:83680592-83680611 Msa0478870:intron 45.0%
TGGAAGTGGAACTAACCTAC+AGG + chr3_3:83681079-83681098 Msa0478870:CDS 45.0%
TAACCTACAGGATAACTCCC+TGG + chr3_3:83681091-83681110 Msa0478870:CDS 45.0%
TGACTTTGCAACATGCACCA+GGG - chr3_3:83681111-83681130 None:intergenic 45.0%
TTGACTTTGCAACATGCACC+AGG - chr3_3:83681112-83681131 None:intergenic 45.0%
GCAAAAAGGTCACTCACCTA+CGG - chr3_3:83681180-83681199 None:intergenic 45.0%
! GTTGAGGATGAGGCTTTTGT+TGG + chr3_3:83681305-83681324 Msa0478870:CDS 45.0%
! GGATGAGGCTTTTGTTGGTA+TGG + chr3_3:83681310-83681329 Msa0478870:CDS 45.0%
ATGGGTGCAATTCTGCTTGA+TGG + chr3_3:83681329-83681348 Msa0478870:CDS 45.0%
TACAAAGATTCCATCTGGCG+AGG + chr3_3:83681406-83681425 Msa0478870:CDS 45.0%
ATTAGACATACCTCGCCAGA+TGG - chr3_3:83681419-83681438 None:intergenic 45.0%
CTGGCGAGGTATGTCTAATT+TGG + chr3_3:83681420-83681439 Msa0478870:intron 45.0%
!! TTAGGTCGCTGGTTTGAATC+CGG + chr3_3:83681512-83681531 Msa0478870:intron 45.0%
!! AACACCGGCTCTACCAATTT+GGG - chr3_3:83681546-83681565 None:intergenic 45.0%
!! TAACACCGGCTCTACCAATT+TGG - chr3_3:83681547-83681566 None:intergenic 45.0%
CAAGCTTATTCTTAGGAGGG+AGG - chr3_3:83681769-83681788 None:intergenic 45.0%
! TACACTGTCAGTCTAGGACT+AGG + chr3_3:83681887-83681906 Msa0478870:intron 45.0%
! ACACTGTCAGTCTAGGACTA+GGG + chr3_3:83681888-83681907 Msa0478870:intron 45.0%
CTGTGTCAACACTAGCACTA+TGG + chr3_3:83682242-83682261 Msa0478870:intron 45.0%
CGCACAATTGTGAAACTTGG+GGG - chr3_3:83682440-83682459 None:intergenic 45.0%
TTTGGTCAAAATGCGCATGG+AGG - chr3_3:83682530-83682549 None:intergenic 45.0%
TTGACCAAATAACGCTGACG+TGG + chr3_3:83682541-83682560 Msa0478870:intron 45.0%
TTAGCCACGTCAGCGTTATT+TGG - chr3_3:83682548-83682567 None:intergenic 45.0%
TTTCCATGTTGGCAAACACG+TGG - chr3_3:83682590-83682609 None:intergenic 45.0%
GTTCACTCGCTCATTCCATT+GGG - chr3_3:83682712-83682731 None:intergenic 45.0%
AGTTCACTCGCTCATTCCAT+TGG - chr3_3:83682713-83682732 None:intergenic 45.0%
GTCAACATACTCATTGGCGA+TGG + chr3_3:83682802-83682821 Msa0478870:intron 45.0%
TTGTAAGCGATGACAGACAG+TGG - chr3_3:83683022-83683041 None:intergenic 45.0%
GTCTGTCATCGCTTACAACA+CGG + chr3_3:83683024-83683043 Msa0478870:intron 45.0%
AATCTCTCCAGAACCATCGA+GGG + chr3_3:83683160-83683179 Msa0478870:intron 45.0%
GTGAGAGTGAGAAAGAATGG+AGG + chr3_3:83683221-83683240 Msa0478870:intron 45.0%
AGAATGGAGGTTTGATGTGG+AGG + chr3_3:83683234-83683253 Msa0478870:intron 45.0%
ATGTGGAGGTTGAAAGAGGA+AGG + chr3_3:83683248-83683267 Msa0478870:intron 45.0%
! TTTTCACGTTGGCGAAGACA+TGG + chr3_3:83683310-83683329 Msa0478870:intron 45.0%
!!! TTAGCCACGCGAGTGTTTTT+TGG + chr3_3:83683350-83683369 Msa0478870:intron 45.0%
TTGACCAAAAAACACTCGCG+TGG - chr3_3:83683357-83683376 None:intergenic 45.0%
GCAAAAGGGGTAATGTTGAG+GGG + chr3_3:83683400-83683419 Msa0478870:intron 45.0%
AGCCTAAAAAAAGGGCAACC+CGG + chr3_3:83683532-83683551 Msa0478870:intron 45.0%
GCGTACAATACACCAAATGG+TGG - chr3_3:83683599-83683618 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG - chr3_3:83683602-83683621 None:intergenic 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + chr3_3:83683634-83683653 Msa0478870:intron 45.0%
TCATGTGACTGTAAGGTCAC+GGG - chr3_3:83683667-83683686 None:intergenic 45.0%
GTCATGTGACTGTAAGGTCA+CGG - chr3_3:83683668-83683687 None:intergenic 45.0%
AGCATCCAAAGTGTATGGCA+TGG + chr3_3:83683971-83683990 Msa0478870:intron 45.0%
AGAGTGAAGATTTAGGGACC+TGG - chr3_3:83684091-83684110 None:intergenic 45.0%
CATCCATGCAGCTCAAGAAT+TGG - chr3_3:83684202-83684221 None:intergenic 45.0%
AACCCAAGCCAGAATAACCA+AGG - chr3_3:83684353-83684372 None:intergenic 45.0%
!!! GGTTATTCTGGCTTGGGTTT+TGG + chr3_3:83684354-83684373 Msa0478870:intron 45.0%
!! CTAAGGGGTACCAACATAGT+TGG + chr3_3:83684456-83684475 Msa0478870:intron 45.0%
CCAAGACATCCCAACTATGT+TGG - chr3_3:83684469-83684488 None:intergenic 45.0%
CCAACATAGTTGGGATGTCT+TGG + chr3_3:83684466-83684485 Msa0478870:intron 45.0%
! GGAAACGAGGTGTCAAATGA+TGG - chr3_3:83684709-83684728 None:intergenic 45.0%
GGCGTGCTCATTAATGATGT+GGG - chr3_3:83684906-83684925 None:intergenic 45.0%
TGGCGTGCTCATTAATGATG+TGG - chr3_3:83684907-83684926 None:intergenic 45.0%
GGTGGAAACAAGTTTGTGCA+TGG - chr3_3:83685099-83685118 None:intergenic 45.0%
CTTAGTGGGATAAGGTTTGG+TGG - chr3_3:83685285-83685304 None:intergenic 45.0%
CCACTTAGTGGGATAAGGTT+TGG - chr3_3:83685288-83685307 None:intergenic 45.0%
CCAAACCTTATCCCACTAAG+TGG + chr3_3:83685285-83685304 Msa0478870:intron 45.0%
CATCATTAGAGAGAGAGTGG+GGG - chr3_3:83685557-83685576 None:intergenic 45.0%
AGGATGTTGTGTTGGATGAG+TGG - chr3_3:83685610-83685629 None:intergenic 45.0%
CGAGAGTAAAGTAAGCGTAG+CGG - chr3_3:83685638-83685657 None:intergenic 45.0%
CGCTTACTTTACTCTCGTGT+TGG + chr3_3:83685641-83685660 Msa0478870:intron 45.0%
! GTTGTATGGTACGGAGTGTT+GGG - chr3_3:83685677-83685696 None:intergenic 45.0%
TGTTGTATGGTACGGAGTGT+TGG - chr3_3:83685678-83685697 None:intergenic 45.0%
TCCGTACCATACAACATTGC+CGG + chr3_3:83685682-83685701 Msa0478870:intron 45.0%
ACCGGCAATGTTGTATGGTA+CGG - chr3_3:83685686-83685705 None:intergenic 45.0%
CTTATCGCACAAAACACCTG+AGG + chr3_3:83685753-83685772 Msa0478870:intron 45.0%
TTGAAATGGAGAAGAGCCTC+AGG - chr3_3:83685772-83685791 None:intergenic 45.0%
TTCAAGCTGGGTGGTTGAAA+TGG - chr3_3:83685786-83685805 None:intergenic 45.0%
ATCATCGTATTCAAGCTGGG+TGG - chr3_3:83685795-83685814 None:intergenic 45.0%
! GCAGATGATGTAGTCTTGCT+TGG - chr3_3:83686052-83686071 None:intergenic 45.0%
GAAAGCCTTGGAGAAGAAAG+GGG - chr3_3:83686278-83686297 None:intergenic 45.0%
GGAAAGCCTTGGAGAAGAAA+GGG - chr3_3:83686279-83686298 None:intergenic 45.0%
TGGAAAGCCTTGGAGAAGAA+AGG - chr3_3:83686280-83686299 None:intergenic 45.0%
CTACTTACTTCGACGCATGA+TGG - chr3_3:83686389-83686408 None:intergenic 45.0%
CGAAGAAAATGCCAGACAAG+TGG - chr3_3:83686606-83686625 None:intergenic 45.0%
AGCGCCTTTGAATGTTGTCA+TGG + chr3_3:83686686-83686705 Msa0478870:intron 45.0%
! CATATTTTGCAGGTTTGGGC+TGG + chr3_3:83686917-83686936 Msa0478870:intron 45.0%
!! CTCTATGTTGGGTGTTGTTC+GGG + chr3_3:83687120-83687139 Msa0478870:CDS 45.0%
! TCAGGAAGAATAAGCTCTGG+TGG - chr3_3:83687151-83687170 None:intergenic 45.0%
!! TATGGCTCCTTTCAAGTTCC+AGG + chr3_3:83687341-83687360 Msa0478870:three_prime_UTR 45.0%
ATCGCTTCCTGGAACTTGAA+AGG - chr3_3:83687351-83687370 None:intergenic 45.0%
! TGTGTTCTCCACTTTGGGTT+AGG + chr3_3:83687390-83687409 Msa0478870:three_prime_UTR 45.0%
! GTGTTCTCCACTTTGGGTTA+GGG + chr3_3:83687391-83687410 Msa0478870:three_prime_UTR 45.0%
! TGTTCTCCACTTTGGGTTAG+GGG + chr3_3:83687392-83687411 Msa0478870:three_prime_UTR 45.0%
!!! AATAGATATTTTTAAATTAA+TGG - chr3_3:83684735-83684754 None:intergenic 5.0%
!! AATTTAACAAAATTAAAAAT+AGG + chr3_3:83685015-83685034 Msa0478870:intron 5.0%
!! ATTTAACAAAATTAAAAATA+GGG + chr3_3:83685016-83685035 Msa0478870:intron 5.0%
!! AACAAAAAAAAAAAAAAATA+AGG - chr3_3:83686801-83686820 None:intergenic 5.0%
!!! TTATTTTTTTTTTTTTTTGT+TGG + chr3_3:83686800-83686819 Msa0478870:intron 5.0%
CTTGAGCATCAGAGACTGAG+AGG - chr3_3:83679908-83679927 None:intergenic 50.0%
CGCTGTATATTGCTCTTCCG+AGG - chr3_3:83679997-83680016 None:intergenic 50.0%
ATGAGAACCGAGGCGATCAA+CGG - chr3_3:83680050-83680069 None:intergenic 50.0%
GTTCTTCGATGTAGCCACCT+TGG - chr3_3:83680075-83680094 None:intergenic 50.0%
TCACCAATGACAGCTGCACT+TGG - chr3_3:83680172-83680191 None:intergenic 50.0%
TGGTTGCACTGTTGAGGATG+AGG + chr3_3:83681295-83681314 Msa0478870:CDS 50.0%
!! GTAGAGGCAGAGTTAGCCTT+AGG + chr3_3:83681494-83681513 Msa0478870:intron 50.0%
GGATTCAAACCAGCGACCTA+AGG - chr3_3:83681513-83681532 None:intergenic 50.0%
CTTAGGAGGGAGGTTCATAG+AGG - chr3_3:83681759-83681778 None:intergenic 50.0%
! CACTGTCAGTCTAGGACTAG+GGG + chr3_3:83681889-83681908 Msa0478870:intron 50.0%
GTGTCATGCTGTCATGGTGA+TGG - chr3_3:83682271-83682290 None:intergenic 50.0%
! CTGTAGGTGTCATGCTGTCA+TGG - chr3_3:83682277-83682296 None:intergenic 50.0%
TCTCCACGTGTTTGCCAACA+TGG + chr3_3:83682584-83682603 Msa0478870:intron 50.0%
GCGAGTGAACTTGACTACGT+TGG + chr3_3:83682722-83682741 Msa0478870:intron 50.0%
ACATACTCATTGGCGATGGG+CGG + chr3_3:83682806-83682825 Msa0478870:intron 50.0%
ATCGCTTACAACACGGCAAG+AGG + chr3_3:83683031-83683050 Msa0478870:intron 50.0%
GAATCTCTCCAGAACCATCG+AGG + chr3_3:83683159-83683178 Msa0478870:intron 50.0%
!!! CACCGGGTTGCCCTTTTTTT+AGG - chr3_3:83683537-83683556 None:intergenic 50.0%
CAACTTTACCAGTTGCGCCA+AGG + chr3_3:83683690-83683709 Msa0478870:intron 50.0%
!! GCACTTTTGAGGGGTAACCT+TGG - chr3_3:83683710-83683729 None:intergenic 50.0%
CCATACACTTTGGATGCTCC+TGG - chr3_3:83683969-83683988 None:intergenic 50.0%
!! CCAGGAGCATCCAAAGTGTA+TGG + chr3_3:83683966-83683985 Msa0478870:intron 50.0%
TGGCCAATTCTTGAGCTGCA+TGG + chr3_3:83684196-83684215 Msa0478870:intron 50.0%
AGGCAGATGCCAAGTTTCCT+TGG + chr3_3:83684333-83684352 Msa0478870:intron 50.0%
!! TTTTTGGTCCCCCTCCTCTT+TGG + chr3_3:83684627-83684646 Msa0478870:intron 50.0%
CACATCATCCAAAGAGGAGG+GGG - chr3_3:83684638-83684657 None:intergenic 50.0%
CCACATCATCCAAAGAGGAG+GGG - chr3_3:83684639-83684658 None:intergenic 50.0%
GCCACATCATCCAAAGAGGA+GGG - chr3_3:83684640-83684659 None:intergenic 50.0%
TGCCACATCATCCAAAGAGG+AGG - chr3_3:83684641-83684660 None:intergenic 50.0%
GTGTGCCACATCATCCAAAG+AGG - chr3_3:83684644-83684663 None:intergenic 50.0%
CCATATTAGCAAGGCCACGT+AGG - chr3_3:83684684-83684703 None:intergenic 50.0%
! CCTACGTGGCCTTGCTAATA+TGG + chr3_3:83684681-83684700 Msa0478870:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr3_3:83685291-83685310 Msa0478870:intron 50.0%
TCTTCTTACCACGGCGTCTA+CGG + chr3_3:83685465-83685484 Msa0478870:intron 50.0%
CGGAGATGAGGATGTTGTGT+TGG - chr3_3:83685618-83685637 None:intergenic 50.0%
! AAGTAAGCGTAGCGGAGATG+AGG - chr3_3:83685630-83685649 None:intergenic 50.0%
GTCAGACCGGCAATGTTGTA+TGG - chr3_3:83685691-83685710 None:intergenic 50.0%
GAGAAGTGGGTCTACCTTAG+AGG - chr3_3:83685911-83685930 None:intergenic 50.0%
ACTCCGTCTTGCTTCTACTC+AGG + chr3_3:83685956-83685975 Msa0478870:intron 50.0%
GCGGAAACCATACGCTTCTA+AGG + chr3_3:83685978-83685997 Msa0478870:intron 50.0%
! GGCAAAGCCTTAGAAGCGTA+TGG - chr3_3:83685988-83686007 None:intergenic 50.0%
TAAACGGGAGGCTAGAGACT+TGG - chr3_3:83686012-83686031 None:intergenic 50.0%
AGTCGAGGGAGGAGTTAAAC+GGG - chr3_3:83686027-83686046 None:intergenic 50.0%
GAGTCGAGGGAGGAGTTAAA+CGG - chr3_3:83686028-83686047 None:intergenic 50.0%
! AGTCTTGCTTGGTGAGTCGA+GGG - chr3_3:83686041-83686060 None:intergenic 50.0%
! TAGTCTTGCTTGGTGAGTCG+AGG - chr3_3:83686042-83686061 None:intergenic 50.0%
AAGGACTTAGGGTTGACCCT+TGG + chr3_3:83686143-83686162 Msa0478870:intron 50.0%
AAGCCCCCTCATACATATCC+TGG + chr3_3:83686227-83686246 Msa0478870:intron 50.0%
TATGCCTGGGAGGTCTACTA+TGG - chr3_3:83686419-83686438 None:intergenic 50.0%
GTGCTTCTTCTCCACTTGTC+TGG + chr3_3:83686592-83686611 Msa0478870:intron 50.0%
! GTTCTCCACTTTGGGTTAGG+GGG + chr3_3:83687393-83687412 Msa0478870:three_prime_UTR 50.0%
ACTTTCCCCCTAACCCAAAG+TGG - chr3_3:83687401-83687420 None:intergenic 50.0%
! TTAGGGGGAAAGTGTGTGGT+AGG + chr3_3:83687408-83687427 Msa0478870:three_prime_UTR 50.0%
CATCAGAGACTGAGAGGTCG+AGG - chr3_3:83679902-83679921 None:intergenic 55.0%
CACCTTGGAGATGAGAACCG+AGG - chr3_3:83680060-83680079 None:intergenic 55.0%
CTCGGTTCTCATCTCCAAGG+TGG + chr3_3:83680058-83680077 Msa0478870:CDS 55.0%
GCACCAAGTGCAGCTGTCAT+TGG + chr3_3:83680166-83680185 Msa0478870:CDS 55.0%
GCACCAGGGAGTTATCCTGT+AGG - chr3_3:83681097-83681116 None:intergenic 55.0%
!! CAGAGTTAGCCTTAGGTCGC+TGG + chr3_3:83681501-83681520 Msa0478870:intron 55.0%
! CTGGTTTGAATCCGGCAGGT+CGG + chr3_3:83681520-83681539 Msa0478870:intron 55.0%
TCGGCCCAAATTGGTAGAGC+CGG + chr3_3:83681539-83681558 Msa0478870:intron 55.0%
CATCAAGCCCTCGATGGTTC+TGG - chr3_3:83683170-83683189 None:intergenic 55.0%
CAGAACCATCGAGGGCTTGA+TGG + chr3_3:83683168-83683187 Msa0478870:intron 55.0%
AACCATCGAGGGCTTGATGG+TGG + chr3_3:83683171-83683190 Msa0478870:intron 55.0%
! ACCATCGAGGGCTTGATGGT+GGG + chr3_3:83683172-83683191 Msa0478870:intron 55.0%
AAGGTCACGGGTTCAAGTCC+TGG - chr3_3:83683655-83683674 None:intergenic 55.0%
CCCCTCCTCTTTGGATGATG+TGG + chr3_3:83684636-83684655 Msa0478870:intron 55.0%
GCCACCTCGTCCAAAGTGAA+GGG + chr3_3:83684923-83684942 Msa0478870:intron 55.0%
CCACCTCGTCCAAAGTGAAG+GGG + chr3_3:83684924-83684943 Msa0478870:intron 55.0%
GTACCCCTTCACTTTGGACG+AGG - chr3_3:83684930-83684949 None:intergenic 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr3_3:83685293-83685312 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr3_3:83685299-83685318 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr3_3:83685300-83685319 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr3_3:83685299-83685318 Msa0478870:intron 55.0%
CTTCTTACCACGGCGTCTAC+GGG + chr3_3:83685466-83685485 Msa0478870:intron 55.0%
!! GTATGGTACGGAGTGTTGGG+CGG - chr3_3:83685674-83685693 None:intergenic 55.0%
CTATCGGACAGCAGTCAGAC+CGG - chr3_3:83685704-83685723 None:intergenic 55.0%
CCGCCTGAGTAGAAGCAAGA+CGG - chr3_3:83685962-83685981 None:intergenic 55.0%
CCGTCTTGCTTCTACTCAGG+CGG + chr3_3:83685959-83685978 Msa0478870:intron 55.0%
TAGTGTGAGGACGCAGGATG+GGG - chr3_3:83686203-83686222 None:intergenic 55.0%
CTAGTGTGAGGACGCAGGAT+GGG - chr3_3:83686204-83686223 None:intergenic 55.0%
ACTAGTGTGAGGACGCAGGA+TGG - chr3_3:83686205-83686224 None:intergenic 55.0%
TTCGACTAGTGTGAGGACGC+AGG - chr3_3:83686209-83686228 None:intergenic 55.0%
CCTTGGAGAAGAAAGGGGTG+AGG - chr3_3:83686273-83686292 None:intergenic 55.0%
CCTCACCCCTTTCTTCTCCA+AGG + chr3_3:83686270-83686289 Msa0478870:intron 55.0%
! CATGATGGAGCGATACCGGA+CGG - chr3_3:83686374-83686393 None:intergenic 55.0%
! GACGCATGATGGAGCGATAC+CGG - chr3_3:83686378-83686397 None:intergenic 55.0%
GCTTCCATAGTAGACCTCCC+AGG + chr3_3:83686412-83686431 Msa0478870:intron 55.0%
! TGGGTTAGGGGGAAAGTGTG+TGG + chr3_3:83687404-83687423 Msa0478870:three_prime_UTR 55.0%
CTGAGAGGTCGAGGTAGACG+TGG - chr3_3:83679893-83679912 None:intergenic 60.0%
GGTCAAGCCGTTGATCGCCT+CGG + chr3_3:83680040-83680059 Msa0478870:CDS 60.0%
CGCCTCGGTTCTCATCTCCA+AGG + chr3_3:83680055-83680074 Msa0478870:CDS 60.0%
TTGCTGCTGGAGCCCTTGTG+AGG + chr3_3:83681378-83681397 Msa0478870:CDS 60.0%
!! GTCGCTGGTTTGAATCCGGC+AGG + chr3_3:83681516-83681535 Msa0478870:intron 60.0%
ACCAATTTGGGCCGACCTGC+CGG - chr3_3:83681534-83681553 None:intergenic 60.0%
ACCCACCATCAAGCCCTCGA+TGG - chr3_3:83683176-83683195 None:intergenic 60.0%
ATGCGGGAGCTTCAGTGCAC+CGG - chr3_3:83683554-83683573 None:intergenic 60.0%
ACTGAAGCTCCCGCATACGC+AGG + chr3_3:83683558-83683577 Msa0478870:intron 60.0%
CTGAAGCTCCCGCATACGCA+GGG + chr3_3:83683559-83683578 Msa0478870:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - chr3_3:83683586-83683605 None:intergenic 60.0%
AGGGGTAACCTTGGCGCAAC+TGG - chr3_3:83683701-83683720 None:intergenic 60.0%
CGCCACCTCGTCCAAAGTGA+AGG + chr3_3:83684922-83684941 Msa0478870:intron 60.0%
CCCCTTCACTTTGGACGAGG+TGG - chr3_3:83684927-83684946 None:intergenic 60.0%
ACGGGAGGCTAGAGACTTGG+AGG - chr3_3:83686009-83686028 None:intergenic 60.0%
CGAGGGAGGAGTTAAACGGG+AGG - chr3_3:83686024-83686043 None:intergenic 60.0%
! CTTGCTTGGTGAGTCGAGGG+AGG - chr3_3:83686038-83686057 None:intergenic 60.0%
AGGACGCAGGATGGGGATAC+CGG - chr3_3:83686196-83686215 None:intergenic 60.0%
AGGGGGCTTCGACTAGTGTG+AGG - chr3_3:83686216-83686235 None:intergenic 60.0%
CAGCTGCATGGACCTGTGCA+AGG - chr3_3:83687021-83687040 None:intergenic 60.0%
TCCGGCAGGTCGGCCCAAAT+TGG + chr3_3:83681530-83681549 Msa0478870:intron 65.0%
TGCGGGAGCTTCAGTGCACC+GGG - chr3_3:83683553-83683572 None:intergenic 65.0%
TTCCCGGACCCTGCGTATGC+GGG - chr3_3:83683570-83683589 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+CGG - chr3_3:83683571-83683590 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+GGG + chr3_3:83683570-83683589 Msa0478870:intron 65.0%
CATACGCAGGGTCCGGGAAG+GGG + chr3_3:83683571-83683590 Msa0478870:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG + chr3_3:83683584-83683603 Msa0478870:intron 65.0%
GAGAAGACCCGTAGACGCCG+TGG - chr3_3:83685476-83685495 None:intergenic 65.0%
GCTCCCGCATACGCAGGGTC+CGG + chr3_3:83683564-83683583 Msa0478870:intron 70.0%
CTCCCGCATACGCAGGGTCC+GGG + chr3_3:83683565-83683584 Msa0478870:intron 70.0%
CGCATACGCAGGGTCCGGGA+AGG + chr3_3:83683569-83683588 Msa0478870:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 83679872 83687620 83679872 ID=Msa0478870;Name=Msa0478870
chr3_3 mRNA 83679872 83687620 83679872 ID=Msa0478870-mRNA-1;Parent=Msa0478870;Name=Msa0478870-mRNA-1;_AED=0.04;_eAED=0.04;_QI=114|1|1|1|1|1|4|407|272
chr3_3 exon 83679872 83680241 83679872 ID=Msa0478870-mRNA-1:exon:23531;Parent=Msa0478870-mRNA-1
chr3_3 exon 83681057 83681182 83681057 ID=Msa0478870-mRNA-1:exon:23532;Parent=Msa0478870-mRNA-1
chr3_3 exon 83681276 83681427 83681276 ID=Msa0478870-mRNA-1:exon:23533;Parent=Msa0478870-mRNA-1
chr3_3 exon 83686929 83687620 83686929 ID=Msa0478870-mRNA-1:exon:23534;Parent=Msa0478870-mRNA-1
chr3_3 five_prime_UTR 83679872 83679985 83679872 ID=Msa0478870-mRNA-1:five_prime_utr;Parent=Msa0478870-mRNA-1
chr3_3 CDS 83679986 83680241 83679986 ID=Msa0478870-mRNA-1:cds;Parent=Msa0478870-mRNA-1
chr3_3 CDS 83681057 83681182 83681057 ID=Msa0478870-mRNA-1:cds;Parent=Msa0478870-mRNA-1
chr3_3 CDS 83681276 83681427 83681276 ID=Msa0478870-mRNA-1:cds;Parent=Msa0478870-mRNA-1
chr3_3 CDS 83686929 83687213 83686929 ID=Msa0478870-mRNA-1:cds;Parent=Msa0478870-mRNA-1
chr3_3 three_prime_UTR 83687214 83687620 83687214 ID=Msa0478870-mRNA-1:three_prime_utr;Parent=Msa0478870-mRNA-1
Gene Sequence

>Msa0478870

ATGGGAACCCTCGGAAGAGCAATATACAGCGTTGGACAGTTGATTCGGAAAACTGGTCAAGCCGTTGATCGCCTCGGTTCTCATCTCCAAGGTGGCTACATCGAAGAACAGCTCTCTAGGCATCGAACTATCTTGAACATATTTGACAAGGCTCCTGTTATTGATAAGGATGTCTTTGTTGCACCAAGTGCAGCTGTCATTGGTGATGTTCAGATTGGAAAAGGGTCATCAATTTGGTATGGATCTGTATTGAGAGGTGATGTTAACAGCATTAGAATTGGAAGTGGAACTAACCTACAGGATAACTCCCTGGTGCATGTTGCAAAGTCAAATTTAAGTGGGAAGGTGTTGCCTACTATTATTGGGGATAATGTTACCGTAGGTCATAGTGCTGTTTTACATGGTTGCACTGTTGAGGATGAGGCTTTTGTTGGTATGGGTGCAATTCTGCTTGATGGCGTCGTCGTTGAGAAAAATGCTATGGTTGCTGCTGGAGCCCTTGTGAGGCAGAATACAAAGATTCCATCTGGCGAGGTTTGGGCTGGCAATCCAGCGAAGTTTCTAAGAAAGCTCACCGATGAAGAGATAGCTTTTATCTCCCAGTCAGCCACCAATTATACTAACCTTGCACAGGTCCATGCAGCTGAAAATTCAAAGTCCTATGAAGAAATTGAGTTTGAGAAAGTGCTGCGTAAGAAGTATGCAACTAAAGATGAGGAGTATGACTCTATGTTGGGTGTTGTTCGGGAGATTCCACCAGAGCTTATTCTTCCTGATAATGTCTTACCTGATAAAGCAAAAAAAGCTCTTAAAATATGA
Protein sequence

>Msa0478870

MGTLGRAIYSVGQLIRKTGQAVDRLGSHLQGGYIEEQLSRHRTILNIFDKAPVIDKDVFVAPSAAVIGDVQIGKGSSIWYGSVLRGDVNSIRIGSGTNLQDNSLVHVAKSNLSGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGAILLDGVVVEKNAMVAAGALVRQNTKIPSGEVWAGNPAKFLRKLTDEEIAFISQSATNYTNLAQVHAAENSKSYEEIEFEKVLRKKYATKDEEYDSMLGVVREIPPELILPDNVLPDKAKKALKI*