AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1252190


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1252190 MtrunA17_Chr8g0368151 97.551 490 12 0 1 490 1 490 0.0 992
Msa1252190 MtrunA17_Chr1g0194521 38.022 455 268 6 29 483 99 539 1.31e-91 289
Msa1252190 MtrunA17_Chr1g0185601 32.955 440 283 6 55 489 69 501 3.09e-81 261
Msa1252190 MtrunA17_Chr2g0282091 31.102 463 315 3 24 485 29 488 1.29e-78 254
Msa1252190 MtrunA17_Chr8g0359961 29.398 432 301 4 25 455 35 463 2.21e-71 235
Msa1252190 MtrunA17_Chr2g0303221 32.771 415 269 8 23 433 31 439 2.99e-67 224
Msa1252190 MtrunA17_Chr4g0021331 31.494 435 286 7 6 433 8 437 6.62e-67 223
Msa1252190 MtrunA17_Chr3g0132571 28.000 450 316 5 43 488 57 502 1.33e-58 201
Msa1252190 MtrunA17_Chr2g0324251 30.238 420 279 7 28 438 37 451 1.76e-54 190
Msa1252190 MtrunA17_Chr1g0155351 32.523 329 219 3 43 368 74 402 9.92e-51 177
Msa1252190 MtrunA17_Chr7g0256181 27.311 476 322 11 15 484 150 607 3.69e-45 167
Msa1252190 MtrunA17_Chr1g0171501 28.285 449 300 10 35 477 151 583 3.44e-40 153
Msa1252190 MtrunA17_Chr8g0335951 29.699 266 180 3 219 484 190 448 1.91e-35 137
Msa1252190 MtrunA17_Chr8g0335951 22.432 370 264 5 1 364 57 409 1.06e-13 73.2
Msa1252190 MtrunA17_Chr2g0328121 23.366 505 359 9 7 490 12 509 2.29e-32 129
Msa1252190 MtrunA17_Chr8g0349421 30.290 241 161 3 244 484 3 236 2.90e-31 120
Msa1252190 MtrunA17_Chr6g0473381 25.243 309 224 3 122 430 22 323 1.32e-20 93.6
Msa1252190 MtrunA17_Chr7g0218641 21.970 396 278 3 58 453 158 522 1.47e-18 88.6
Msa1252190 MtrunA17_Chr8g0369641 24.026 308 227 2 120 427 488 788 2.28e-18 88.6
Msa1252190 MtrunA17_Chr8g0369641 23.464 358 256 8 126 477 318 663 1.53e-12 70.1
Msa1252190 MtrunA17_Chr5g0446031 22.025 395 299 3 72 464 429 816 4.14e-18 87.8
Msa1252190 MtrunA17_Chr5g0446031 20.238 420 285 5 85 464 92 501 5.71e-14 74.7
Msa1252190 MtrunA17_Chr5g0446031 23.028 317 234 4 145 460 225 532 7.04e-14 74.3
Msa1252190 MtrunA17_Chr5g0446031 21.538 325 245 4 77 399 574 890 2.70e-12 69.3
Msa1252190 MtrunA17_Chr8g0392911 27.273 264 186 4 122 382 194 454 8.25e-18 86.7
Msa1252190 MtrunA17_Chr8g0392911 24.928 345 214 7 126 434 338 673 7.66e-15 77.4
Msa1252190 MtrunA17_Chr1g0210801 23.209 349 224 6 97 443 249 555 2.57e-17 84.7
Msa1252190 MtrunA17_Chr1g0210801 18.579 366 291 3 94 459 108 466 8.48e-11 64.3
Msa1252190 MtrunA17_Chr6g0473031 24.206 252 190 1 126 377 214 464 4.82e-17 84.0
Msa1252190 MtrunA17_Chr6g0473261 25.292 257 181 3 126 377 248 498 9.97e-17 83.2
Msa1252190 MtrunA17_Chr6g0473341 22.619 252 194 1 126 377 200 450 1.79e-16 82.0
Msa1252190 MtrunA17_Chr6g0473481 25.292 257 181 3 126 377 200 450 2.62e-16 81.6
Msa1252190 MtrunA17_Chr6g0473511 25.292 257 181 3 126 377 200 450 2.62e-16 81.6
Msa1252190 MtrunA17_Chr6g0473241 22.619 252 194 1 126 377 200 450 3.61e-16 81.3
Msa1252190 MtrunA17_Chr6g0473351 25.681 257 177 4 126 377 200 447 3.65e-16 81.3
Msa1252190 MtrunA17_Chr1g0162281 23.380 355 252 7 126 471 122 465 5.11e-16 80.9
Msa1252190 MtrunA17_Chr1g0162281 19.540 348 253 3 126 473 407 727 2.03e-12 69.7
Msa1252190 MtrunA17_Chr3g0143851 21.114 341 262 2 139 479 297 630 5.69e-16 80.9
Msa1252190 MtrunA17_Chr1g0211881 25.625 320 223 6 117 433 206 513 7.35e-16 80.1
Msa1252190 MtrunA17_Chr4g0059671 23.529 408 289 8 62 459 109 503 1.05e-15 80.1
Msa1252190 MtrunA17_Chr5g0396041 23.188 276 205 2 159 434 337 605 1.64e-15 79.7
Msa1252190 MtrunA17_Chr5g0396041 24.583 240 180 1 126 365 374 612 9.53e-15 77.4
Msa1252190 MtrunA17_Chr7g0220501 24.364 275 203 3 124 396 320 591 2.14e-15 79.3
Msa1252190 MtrunA17_Chr7g0220501 24.299 214 157 4 183 394 309 519 7.30e-11 64.7
Msa1252190 MtrunA17_Chr6g0473431 24.206 252 187 2 126 377 203 450 2.54e-15 78.6
Msa1252190 MtrunA17_Chr5g0434021 22.251 382 281 6 97 474 300 669 2.78e-15 79.0
Msa1252190 MtrunA17_Chr7g0220481 22.383 277 210 3 122 396 283 556 3.21e-15 78.6
Msa1252190 MtrunA17_Chr8g0349431 34.188 117 75 1 36 150 6 122 3.74e-15 72.0
Msa1252190 MtrunA17_Chr6g0471531 21.942 278 216 1 122 399 218 494 3.95e-15 77.8
Msa1252190 MtrunA17_Chr6g0471871 21.988 332 252 2 122 453 207 531 5.71e-15 77.4
Msa1252190 MtrunA17_Chr6g0478691 23.462 260 194 3 126 383 281 537 5.98e-15 77.4
Msa1252190 MtrunA17_Chr3g0089851 23.016 252 192 2 126 376 206 456 7.74e-15 76.6
Msa1252190 MtrunA17_Chr1g0147171 22.741 343 247 8 122 458 143 473 8.24e-15 77.0
Msa1252190 MtrunA17_Chr5g0412071 22.888 367 270 7 109 471 314 671 1.12e-14 77.0
Msa1252190 MtrunA17_Chr7g0236501 22.222 252 194 2 126 376 224 474 1.17e-14 76.3
Msa1252190 MtrunA17_Chr6g0478551 22.029 345 223 6 122 464 196 496 1.23e-14 76.3
Msa1252190 MtrunA17_Chr6g0473501 21.429 252 197 1 126 377 95 345 1.52e-14 75.5
Msa1252190 MtrunA17_Chr8g0368891 22.984 248 190 1 122 369 415 661 1.76e-14 76.3
Msa1252190 MtrunA17_Chr7g0246931 24.069 349 220 7 122 433 174 514 1.78e-14 75.9
Msa1252190 MtrunA17_Chr2g0277851 19.182 318 250 2 141 458 192 502 1.86e-14 75.9
Msa1252190 MtrunA17_Chr6g0473471 21.429 252 197 1 126 377 95 345 1.89e-14 75.5
Msa1252190 MtrunA17_Chr8g0365781 23.181 371 225 9 120 464 452 788 1.94e-14 76.3
Msa1252190 MtrunA17_Chr6g0473251 24.125 257 181 4 126 377 200 447 2.35e-14 75.5
Msa1252190 MtrunA17_Chr4g0060341 21.751 354 231 7 126 440 203 549 3.16e-14 75.1
Msa1252190 MtrunA17_Chr4g0060341 22.925 253 159 2 122 374 342 558 4.87e-11 65.1
Msa1252190 MtrunA17_Chr6g0482551 21.407 327 223 5 62 386 166 460 4.96e-14 74.3
Msa1252190 MtrunA17_Chr4g0030691 20.937 363 243 5 105 465 127 447 6.89e-14 73.6
Msa1252190 MtrunA17_Chr6g0473311 25.385 260 189 3 120 377 11 267 7.54e-14 72.4
Msa1252190 MtrunA17_Chr4g0037841 21.751 354 231 7 126 440 203 549 1.13e-13 73.6
Msa1252190 MtrunA17_Chr4g0037841 23.715 253 157 4 122 374 342 558 3.11e-11 65.9
Msa1252190 MtrunA17_Chr4g0037841 20.681 382 250 6 133 472 140 510 4.95e-11 65.1
Msa1252190 MtrunA17_Chr6g0481971 22.709 251 158 3 126 376 304 518 1.23e-13 73.2
Msa1252190 MtrunA17_Chr6g0482571 24.201 219 165 1 159 377 96 313 1.45e-13 72.4
Msa1252190 MtrunA17_Chr6g0482571 24.380 242 180 3 122 362 164 403 5.09e-12 67.8
Msa1252190 MtrunA17_Chr6g0472611 24.219 256 193 1 122 377 202 456 1.45e-13 73.2
Msa1252190 MtrunA17_Chr3g0099661 21.538 455 322 9 43 490 424 850 1.48e-13 73.6
Msa1252190 MtrunA17_Chr3g0099661 20.974 267 209 2 124 389 277 542 7.49e-11 64.7
Msa1252190 MtrunA17_Chr6g0473441 21.825 252 196 1 126 377 200 450 2.52e-13 72.4
Msa1252190 MtrunA17_Chr8g0353181 21.615 384 255 7 133 480 140 513 2.64e-13 72.4
Msa1252190 MtrunA17_Chr3g0136851 21.444 457 333 8 39 479 208 654 3.36e-13 72.4
Msa1252190 MtrunA17_Chr6g0473491 21.429 252 197 1 126 377 200 450 3.45e-13 71.6
Msa1252190 MtrunA17_Chr4g0047591 22.350 349 255 4 120 464 459 795 4.58e-13 72.0
Msa1252190 MtrunA17_Chr1g0171281 24.206 252 190 1 126 377 201 451 6.87e-13 70.9
Msa1252190 MtrunA17_Chr7g0256621 22.289 332 236 6 142 465 169 486 8.79e-13 70.5
Msa1252190 MtrunA17_Chr6g0483431 21.378 421 249 10 37 397 11 409 9.08e-13 70.1
Msa1252190 MtrunA17_Chr6g0482601 21.739 253 193 3 126 376 118 367 1.14e-12 70.1
Msa1252190 MtrunA17_Chr1g0162221 23.232 198 149 2 97 292 373 569 1.27e-12 70.1
Msa1252190 MtrunA17_Chr6g0482821 21.739 253 193 3 126 376 209 458 1.32e-12 70.1
Msa1252190 MtrunA17_Chr1g0211781 23.457 324 202 6 159 480 462 741 1.70e-12 70.1
Msa1252190 MtrunA17_Chr4g0033981 19.597 347 237 4 122 433 251 590 1.74e-12 69.7
Msa1252190 MtrunA17_Chr4g0033981 21.408 341 261 2 126 466 220 553 3.83e-12 68.6
Msa1252190 MtrunA17_Chr6g0482611 21.654 254 194 3 126 377 211 461 1.79e-12 69.7
Msa1252190 MtrunA17_Chr1g0160881 23.224 366 260 9 122 480 241 592 1.97e-12 69.7
Msa1252190 MtrunA17_Chr6g0481991 20.992 262 206 1 122 383 232 492 2.03e-12 69.3
Msa1252190 MtrunA17_Chr7g0241721 22.008 259 199 3 126 383 25 281 2.32e-12 69.3
Msa1252190 MtrunA17_Chr1g0181661 29.630 162 110 2 107 267 417 575 2.42e-12 69.3
Msa1252190 MtrunA17_Chr2g0297211 20.449 401 302 6 71 465 230 619 2.53e-12 69.7
Msa1252190 MtrunA17_Chr5g0419551 19.929 281 223 2 120 399 351 630 2.94e-12 68.9
Msa1252190 MtrunA17_Chr6g0482971 21.374 262 203 3 126 386 197 456 3.02e-12 68.9
Msa1252190 MtrunA17_Chr3g0126831 21.389 360 250 6 140 490 422 757 3.74e-12 68.9
Msa1252190 MtrunA17_Chr3g0102961 20.743 323 225 5 58 377 168 462 4.11e-12 68.2
Msa1252190 MtrunA17_Chr5g0442231 21.212 330 247 5 95 420 377 697 4.68e-12 68.6
Msa1252190 MtrunA17_Chr1g0194281 24.752 202 149 3 124 324 232 431 4.96e-12 68.2
Msa1252190 MtrunA17_Chr5g0434451 22.642 265 201 2 126 387 299 562 5.06e-12 68.2
Msa1252190 MtrunA17_Chr8g0375231 23.482 247 188 1 126 372 257 502 5.48e-12 68.2
Msa1252190 MtrunA17_Chr4g0039041 20.956 272 214 1 126 397 467 737 6.17e-12 68.2
Msa1252190 MtrunA17_Chr6g0473331 21.053 323 224 5 58 377 194 488 6.26e-12 67.8
Msa1252190 MtrunA17_Chr6g0479541 20.436 367 284 3 30 394 205 565 9.12e-12 67.4
Msa1252190 MtrunA17_Chr8g0387281 22.491 289 183 4 122 372 314 599 1.02e-11 67.4
Msa1252190 MtrunA17_Chr7g0217921 22.569 288 209 4 126 407 403 682 1.03e-11 67.4
Msa1252190 MtrunA17_Chr6g0471481 21.942 278 205 2 122 399 22 287 1.86e-11 65.1
Msa1252190 MtrunA17_Chr6g0482541 22.441 254 192 3 126 377 45 295 1.87e-11 65.9
Msa1252190 MtrunA17_Chr1g0168811 20.648 247 195 1 126 372 290 535 1.95e-11 66.2
Msa1252190 MtrunA17_Chr3g0121341 22.118 321 240 5 161 478 163 476 1.96e-11 66.6
Msa1252190 MtrunA17_Chr6g0478291 22.097 267 203 4 122 386 203 466 2.33e-11 66.2
Msa1252190 MtrunA17_Chr2g0297991 22.182 275 201 4 126 394 556 823 2.88e-11 66.2
Msa1252190 MtrunA17_Chr2g0297991 21.731 543 328 15 11 483 321 836 5.24e-11 65.5
Msa1252190 MtrunA17_Chr1g0196741 24.380 242 179 4 125 365 461 699 3.08e-11 65.9
Msa1252190 MtrunA17_Chr1g0182521 20.749 347 268 2 120 466 269 608 3.27e-11 65.9
Msa1252190 MtrunA17_Chr6g0476151 21.887 265 206 1 122 386 199 462 3.41e-11 65.5
Msa1252190 MtrunA17_Chr7g0241871 20.899 378 251 7 43 377 117 489 3.47e-11 65.9
Msa1252190 MtrunA17_Chr6g0482561 21.639 305 201 5 74 376 96 364 4.19e-11 64.7
Msa1252190 MtrunA17_Chr1g0170071 19.315 409 273 9 85 480 359 723 4.33e-11 65.5
Msa1252190 MtrunA17_Chr2g0292711 21.978 273 201 3 126 394 226 490 4.74e-11 65.1
Msa1252190 MtrunA17_Chr8g0377751 20.702 285 206 6 86 365 253 522 5.71e-11 65.1
Msa1252190 MtrunA17_Chr7g0245891 29.518 166 113 3 97 260 188 351 6.88e-11 64.3
Msa1252190 MtrunA17_Chr6g0481431 25.194 258 151 6 122 376 9 227 7.36e-11 62.8
Msa1252190 MtrunA17_Chr0c20g0493831 25.000 204 152 1 160 362 141 344 7.74e-11 64.3
Msa1252190 MtrunA17_Chr0c20g0493831 24.183 306 194 10 60 352 124 404 8.16e-11 64.3
Msa1252190 MtrunA17_Chr6g0481621 19.608 255 204 1 122 376 224 477 7.97e-11 64.3
Msa1252190 MtrunA17_Chr7g0214351 22.899 345 249 8 97 436 318 650 8.06e-11 64.7
Msa1252190 MtrunA17_Chr4g0069231 25.000 204 152 1 160 362 141 344 8.36e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1252190 AT1G60770.1 65.779 488 166 1 4 490 3 490 0.0 698
Msa1252190 AT1G02370.1 41.228 456 263 3 33 487 84 535 2.66e-119 360
Msa1252190 AT4G01990.1 38.831 479 282 5 12 487 30 500 8.06e-106 325
Msa1252190 AT1G02150.1 34.921 441 281 3 2 439 46 483 4.74e-85 271
Msa1252190 AT4G02820.1 34.240 441 282 5 50 489 88 521 2.96e-83 267
Msa1252190 AT4G21705.1 32.334 467 312 4 24 488 26 490 3.45e-81 261
Msa1252190 AT5G27460.1 29.646 452 310 4 28 474 43 491 1.15e-62 212
Msa1252190 AT2G20710.1 29.773 440 297 7 23 459 38 468 1.38e-60 206
Msa1252190 AT2G20710.2 32.075 371 241 6 91 459 12 373 3.48e-58 197
Msa1252190 AT5G09450.1 30.392 306 209 4 43 344 75 380 1.33e-43 159
Msa1252190 AT1G80270.1 28.125 448 299 10 37 477 142 573 4.51e-43 161
Msa1252190 AT1G80270.3 28.125 448 299 10 37 477 142 573 4.51e-43 161
Msa1252190 AT1G80270.2 28.125 448 299 10 37 477 142 573 4.51e-43 161
Msa1252190 AT1G80270.5 28.125 448 299 10 37 477 142 573 4.51e-43 161
Msa1252190 AT1G80270.4 28.125 448 299 10 37 477 142 573 4.51e-43 161
Msa1252190 AT1G28020.1 28.211 436 289 9 40 461 60 485 1.10e-41 155
Msa1252190 AT1G15480.1 26.577 444 315 6 35 477 138 571 6.65e-40 152
Msa1252190 AT3G15590.1 27.074 458 313 9 31 478 141 587 5.21e-33 132
Msa1252190 AT3G15590.2 27.074 458 313 9 31 478 141 587 5.21e-33 132
Msa1252190 AT1G07590.1 23.810 462 334 7 37 489 79 531 1.89e-26 112
Msa1252190 AT3G11380.1 29.431 299 175 6 62 356 82 348 5.87e-25 108
Msa1252190 AT3G11380.1 29.808 208 138 4 11 215 339 541 2.52e-16 82.0
Msa1252190 AT2G35130.1 25.000 364 222 9 83 440 256 574 3.56e-20 94.4
Msa1252190 AT2G35130.3 25.000 364 222 9 83 440 253 571 3.60e-20 94.0
Msa1252190 AT2G35130.2 25.275 364 221 9 83 440 278 596 4.76e-20 94.0
Msa1252190 AT3G06920.1 22.626 358 269 3 126 483 171 520 3.05e-17 85.5
Msa1252190 AT3G06920.1 21.628 393 299 3 74 464 396 781 5.41e-17 84.7
Msa1252190 AT3G06920.1 22.263 274 205 2 126 399 590 855 1.43e-12 70.9
Msa1252190 AT1G03560.1 21.067 356 239 3 125 480 154 467 3.10e-17 85.1
Msa1252190 AT5G39980.1 26.848 257 187 1 120 376 187 442 3.15e-17 85.1
Msa1252190 AT5G39980.1 21.538 325 244 4 157 478 154 470 5.38e-14 75.1
Msa1252190 AT5G39980.1 19.466 262 191 5 121 376 398 645 6.90e-11 65.1
Msa1252190 AT3G06920.2 22.626 358 269 3 126 483 185 534 3.24e-17 85.5
Msa1252190 AT3G06920.2 21.628 393 299 3 74 464 410 795 5.27e-17 84.7
Msa1252190 AT3G06920.2 22.263 274 205 2 126 399 604 869 1.50e-12 70.5
Msa1252190 AT3G06920.3 22.626 358 269 3 126 483 185 534 3.24e-17 85.5
Msa1252190 AT3G06920.3 21.628 393 299 3 74 464 410 795 5.27e-17 84.7
Msa1252190 AT3G06920.3 22.263 274 205 2 126 399 604 869 1.50e-12 70.5
Msa1252190 AT1G09680.1 23.552 259 197 1 126 384 313 570 8.08e-17 84.0
Msa1252190 AT1G09680.1 20.890 292 224 2 126 417 243 527 6.62e-12 68.2
Msa1252190 AT5G65560.1 22.404 366 241 5 122 487 392 714 5.53e-16 81.6
Msa1252190 AT5G65560.2 22.404 366 241 5 122 487 392 714 5.53e-16 81.6
Msa1252190 AT5G65560.3 22.404 366 241 5 122 487 392 714 5.53e-16 81.6
Msa1252190 AT5G12100.1 29.710 276 179 7 126 394 217 484 1.43e-15 80.1
Msa1252190 AT5G12100.1 21.176 255 200 1 122 376 388 641 5.83e-11 65.5
Msa1252190 AT2G02150.1 23.108 251 192 1 126 376 265 514 1.49e-15 80.1
Msa1252190 AT2G02150.2 23.108 251 192 1 126 376 265 514 1.49e-15 80.1
Msa1252190 AT2G18940.1 23.420 269 205 1 126 394 529 796 2.35e-15 79.3
Msa1252190 AT2G18940.1 22.404 183 139 2 102 282 608 789 6.49e-11 65.5
Msa1252190 AT5G02860.1 24.597 248 172 4 159 399 455 694 4.74e-15 78.6
Msa1252190 AT5G02860.1 21.616 458 303 9 32 479 112 523 1.03e-13 74.3
Msa1252190 AT5G02860.1 21.790 257 200 1 120 376 276 531 1.51e-13 73.9
Msa1252190 AT5G02860.1 23.413 252 192 1 126 377 527 777 5.32e-13 72.0
Msa1252190 AT5G02860.1 25.980 204 148 2 109 310 613 815 7.88e-13 71.6
Msa1252190 AT5G02860.4 24.597 248 172 4 159 399 455 694 4.74e-15 78.6
Msa1252190 AT5G02860.4 21.616 458 303 9 32 479 112 523 1.03e-13 74.3
Msa1252190 AT5G02860.4 21.790 257 200 1 120 376 276 531 1.51e-13 73.9
Msa1252190 AT5G02860.4 23.413 252 192 1 126 377 527 777 5.32e-13 72.0
Msa1252190 AT5G02860.4 25.980 204 148 2 109 310 613 815 7.88e-13 71.6
Msa1252190 AT5G02860.2 24.597 248 172 4 159 399 455 694 4.74e-15 78.6
Msa1252190 AT5G02860.2 21.616 458 303 9 32 479 112 523 1.03e-13 74.3
Msa1252190 AT5G02860.2 21.790 257 200 1 120 376 276 531 1.51e-13 73.9
Msa1252190 AT5G02860.2 23.413 252 192 1 126 377 527 777 5.32e-13 72.0
Msa1252190 AT5G02860.2 25.980 204 148 2 109 310 613 815 7.88e-13 71.6
Msa1252190 AT5G02860.5 24.597 248 172 4 159 399 455 694 4.74e-15 78.6
Msa1252190 AT5G02860.5 21.616 458 303 9 32 479 112 523 1.03e-13 74.3
Msa1252190 AT5G02860.5 21.790 257 200 1 120 376 276 531 1.51e-13 73.9
Msa1252190 AT5G02860.5 23.413 252 192 1 126 377 527 777 5.32e-13 72.0
Msa1252190 AT5G02860.5 25.980 204 148 2 109 310 613 815 7.88e-13 71.6
Msa1252190 AT5G02860.3 24.597 248 172 4 159 399 455 694 4.74e-15 78.6
Msa1252190 AT5G02860.3 21.616 458 303 9 32 479 112 523 1.03e-13 74.3
Msa1252190 AT5G02860.3 21.790 257 200 1 120 376 276 531 1.51e-13 73.9
Msa1252190 AT5G02860.3 23.413 252 192 1 126 377 527 777 5.32e-13 72.0
Msa1252190 AT5G02860.3 25.980 204 148 2 109 310 613 815 7.88e-13 71.6
Msa1252190 AT2G31400.1 23.759 282 212 2 111 390 325 605 1.23e-14 77.4
Msa1252190 AT2G31400.1 26.291 213 154 2 70 280 354 565 1.95e-12 70.5
Msa1252190 AT2G31400.2 23.759 282 212 2 111 390 325 605 1.34e-14 77.0
Msa1252190 AT2G31400.2 24.701 251 185 3 33 280 316 565 1.47e-12 70.5
Msa1252190 AT5G61990.1 23.810 294 214 5 102 388 534 824 2.29e-14 76.6
Msa1252190 AT5G61990.1 21.591 264 206 1 122 385 451 713 1.19e-12 70.9
Msa1252190 AT1G62590.2 24.224 322 200 5 97 416 337 616 2.67e-14 75.9
Msa1252190 AT1G62590.1 24.224 322 200 5 97 416 337 616 2.67e-14 75.9
Msa1252190 AT1G64583.2 19.668 361 281 3 126 484 84 437 3.22e-14 75.5
Msa1252190 AT3G53170.4 21.379 290 226 2 111 399 153 441 3.73e-14 75.1
Msa1252190 AT1G64583.1 19.668 361 281 3 126 484 109 462 3.76e-14 75.1
Msa1252190 AT1G66345.1 21.573 445 298 9 80 490 103 530 4.52e-14 75.1
Msa1252190 AT3G59040.1 26.552 290 196 7 117 399 205 484 4.93e-14 75.1
Msa1252190 AT3G59040.1 25.943 212 156 1 145 356 301 511 2.03e-13 73.2
Msa1252190 AT3G59040.2 26.552 290 196 7 117 399 212 491 5.07e-14 75.1
Msa1252190 AT3G59040.2 25.943 212 156 1 145 356 308 518 1.82e-13 73.2
Msa1252190 AT1G63230.1 24.922 321 195 7 121 439 39 315 5.14e-14 73.6
Msa1252190 AT1G77360.2 21.933 269 201 2 184 452 158 417 6.17e-14 74.3
Msa1252190 AT1G77360.2 24.756 307 213 9 110 414 159 449 3.79e-12 68.9
Msa1252190 AT1G28000.1 25.442 283 201 7 21 297 31 309 6.95e-14 73.6
Msa1252190 AT5G04810.2 19.492 354 278 2 126 479 347 693 7.73e-14 74.7
Msa1252190 AT5G04810.1 19.492 354 278 2 126 479 347 693 8.26e-14 74.7
Msa1252190 AT2G32630.1 23.442 337 249 5 145 480 211 539 9.76e-14 74.3
Msa1252190 AT3G53170.2 21.377 276 215 2 111 385 203 477 9.91e-14 73.9
Msa1252190 AT3G53170.1 21.377 276 215 2 111 385 203 477 9.91e-14 73.9
Msa1252190 AT1G77360.1 21.933 269 201 2 184 452 194 453 1.01e-13 73.9
Msa1252190 AT1G77360.1 24.756 307 213 9 110 414 195 485 5.98e-12 68.2
Msa1252190 AT3G53700.1 21.127 355 266 6 128 477 264 609 1.31e-13 73.9
Msa1252190 AT3G22470.1 21.127 355 269 4 128 480 180 525 3.01e-13 72.4
Msa1252190 AT3G23020.1 23.932 234 173 3 159 389 506 737 3.06e-13 72.8
Msa1252190 AT3G23020.1 21.995 441 326 8 27 459 229 659 3.54e-13 72.8
Msa1252190 AT3G06430.1 24.020 204 154 1 160 362 126 329 4.13e-13 72.0
Msa1252190 AT1G62930.1 22.078 385 253 5 38 417 270 612 4.22e-13 72.0
Msa1252190 AT3G16010.1 25.352 284 204 3 114 390 288 570 4.98e-13 72.0
Msa1252190 AT3G16010.1 21.519 237 184 2 159 394 374 609 2.69e-11 66.6
Msa1252190 AT1G09900.1 21.526 367 273 5 128 490 142 497 5.92e-13 71.6
Msa1252190 AT2G17140.1 20.803 274 212 2 108 376 165 438 6.47e-13 71.6
Msa1252190 AT2G17140.2 20.803 274 212 2 108 376 165 438 6.47e-13 71.6
Msa1252190 AT1G64100.2 20.570 316 236 5 126 439 229 531 6.92e-13 71.6
Msa1252190 AT1G64100.1 20.570 316 236 5 126 439 229 531 7.57e-13 71.2
Msa1252190 AT1G64100.3 20.570 316 236 5 126 439 229 531 7.57e-13 71.2
Msa1252190 AT1G63330.3 22.981 322 204 4 97 416 262 541 1.25e-12 70.5
Msa1252190 AT1G63330.1 22.981 322 204 4 97 416 262 541 1.25e-12 70.5
Msa1252190 AT1G63330.2 22.981 322 204 4 97 416 262 541 1.25e-12 70.5
Msa1252190 AT1G12775.1 21.678 286 211 3 120 399 330 608 1.33e-12 70.5
Msa1252190 AT1G09820.1 21.348 356 230 5 122 472 222 532 1.64e-12 70.1
Msa1252190 AT1G12620.1 22.761 268 188 5 126 384 320 577 1.79e-12 70.1
Msa1252190 AT1G12620.1 21.324 272 209 3 128 397 182 450 9.78e-11 64.7
Msa1252190 AT1G62670.2 22.441 254 196 1 124 377 257 509 1.91e-12 70.1
Msa1252190 AT1G62670.2 23.466 277 209 2 97 371 333 608 5.17e-11 65.5
Msa1252190 AT1G62670.1 22.441 254 196 1 124 377 257 509 1.91e-12 70.1
Msa1252190 AT1G62670.1 23.466 277 209 2 97 371 333 608 5.17e-11 65.5
Msa1252190 AT4G20090.2 22.780 259 196 2 122 377 326 583 2.33e-12 69.7
Msa1252190 AT4G20090.1 22.780 259 196 2 122 377 326 583 2.33e-12 69.7
Msa1252190 AT4G30825.1 30.387 181 116 3 97 272 706 881 2.92e-12 69.7
Msa1252190 AT1G74750.2 22.628 274 203 4 192 464 358 623 2.98e-12 69.7
Msa1252190 AT1G74750.1 22.628 274 203 4 192 464 358 623 2.98e-12 69.7
Msa1252190 AT1G74750.4 22.628 274 203 4 192 464 358 623 2.98e-12 69.7
Msa1252190 AT1G74750.3 22.628 274 203 4 192 464 358 623 2.98e-12 69.7
Msa1252190 AT3G09650.1 24.510 204 149 3 89 291 457 656 3.60e-12 69.3
Msa1252190 AT2G41720.2 21.914 324 242 5 159 480 189 503 3.72e-12 69.3
Msa1252190 AT1G74850.1 24.903 257 156 4 122 377 140 360 4.34e-12 69.3
Msa1252190 AT1G74850.1 20.879 364 245 6 124 487 248 568 9.36e-11 65.1
Msa1252190 AT2G41720.3 21.914 324 242 5 159 480 321 635 4.78e-12 68.9
Msa1252190 AT4G11690.1 23.485 264 187 3 120 376 195 450 4.90e-12 68.6
Msa1252190 AT4G11690.1 24.852 169 126 1 122 290 302 469 7.22e-12 68.2
Msa1252190 AT4G28010.1 22.543 346 224 5 122 466 106 408 5.05e-12 68.9
Msa1252190 AT2G41720.1 21.914 324 242 5 159 480 321 635 5.11e-12 68.9
Msa1252190 AT5G27270.1 21.888 233 180 2 122 354 292 522 5.13e-12 68.9
Msa1252190 AT3G53170.3 21.190 269 203 2 126 385 182 450 5.14e-12 68.2
Msa1252190 AT5G27270.5 21.888 233 180 2 122 354 292 522 5.23e-12 68.9
Msa1252190 AT5G42310.1 21.479 284 216 2 139 422 320 596 5.30e-12 68.9
Msa1252190 AT5G42310.1 22.050 322 230 7 162 476 273 580 4.70e-11 65.9
Msa1252190 AT5G42310.1 22.876 306 223 3 163 465 309 604 5.84e-11 65.5
Msa1252190 AT5G27270.4 21.888 233 180 2 122 354 292 522 5.58e-12 68.9
Msa1252190 AT4G11690.2 24.852 169 126 1 122 290 275 442 6.45e-12 68.2
Msa1252190 AT4G11690.2 23.643 258 182 3 126 376 174 423 8.77e-12 67.8
Msa1252190 AT5G01110.1 21.114 341 254 6 126 462 273 602 6.52e-12 68.6
Msa1252190 AT5G01110.1 20.992 262 206 1 129 390 241 501 1.38e-11 67.4
Msa1252190 AT1G63070.1 22.530 253 194 2 126 377 218 469 6.66e-12 68.2
Msa1252190 AT5G01110.2 21.114 341 254 6 126 462 301 630 7.39e-12 68.6
Msa1252190 AT5G01110.2 20.992 262 206 1 129 390 269 529 1.55e-11 67.4
Msa1252190 AT5G27270.3 21.983 232 179 2 122 353 87 316 7.41e-12 68.6
Msa1252190 AT5G27270.2 21.983 232 179 2 122 353 87 316 7.41e-12 68.6
Msa1252190 AT3G04130.1 27.119 236 168 4 126 358 262 496 9.63e-12 67.8
Msa1252190 AT3G04130.2 27.119 236 168 4 126 358 262 496 9.63e-12 67.8
Msa1252190 AT1G52640.1 23.502 217 159 4 101 313 219 432 1.56e-11 67.0
Msa1252190 AT1G12300.1 24.013 304 228 2 76 377 319 621 1.57e-11 67.0
Msa1252190 AT1G10910.2 20.332 241 191 1 141 381 220 459 1.84e-11 67.0
Msa1252190 AT1G10910.1 20.332 241 191 1 141 381 220 459 1.89e-11 67.0
Msa1252190 AT2G15630.1 19.652 402 249 6 118 452 220 614 2.01e-11 67.0
Msa1252190 AT5G25630.1 22.028 286 209 4 126 402 118 398 2.15e-11 66.6
Msa1252190 AT5G25630.3 22.028 286 209 4 126 402 67 347 2.24e-11 66.6
Msa1252190 AT2G19280.4 25.100 251 181 4 124 371 409 655 2.41e-11 66.6
Msa1252190 AT2G19280.2 25.100 251 181 4 124 371 409 655 2.41e-11 66.6
Msa1252190 AT2G19280.1 25.100 251 181 4 124 371 409 655 2.41e-11 66.6
Msa1252190 AT2G19280.3 25.100 251 181 4 124 371 409 655 2.41e-11 66.6
Msa1252190 AT4G31850.1 21.149 383 266 5 122 472 187 565 2.50e-11 67.0
Msa1252190 AT1G19290.2 20.866 254 200 1 120 373 293 545 2.57e-11 66.6
Msa1252190 AT1G19290.1 20.866 254 200 1 120 373 293 545 2.57e-11 66.6
Msa1252190 AT1G63080.2 21.724 290 189 3 97 384 317 570 2.71e-11 66.2
Msa1252190 AT1G63080.1 21.724 290 189 3 97 384 317 570 2.71e-11 66.2
Msa1252190 AT1G63080.3 21.724 290 189 3 97 384 317 570 2.71e-11 66.2
Msa1252190 AT4G39620.1 23.137 255 187 6 122 372 207 456 3.22e-11 66.2
Msa1252190 AT1G51965.1 22.333 300 227 3 97 394 315 610 3.24e-11 66.2
Msa1252190 AT1G43010.1 27.830 212 136 5 43 248 56 256 3.38e-11 63.9
Msa1252190 AT1G13040.2 22.222 270 200 3 135 399 21 285 3.38e-11 65.9
Msa1252190 AT1G13040.1 22.222 270 200 3 135 399 21 285 3.38e-11 65.9
Msa1252190 AT1G05670.1 19.277 332 258 4 113 441 234 558 3.42e-11 66.2
Msa1252190 AT1G05670.2 19.277 332 258 4 113 441 234 558 3.42e-11 66.2
Msa1252190 AT1G05670.3 19.277 332 258 4 113 441 234 558 3.42e-11 66.2
Msa1252190 AT1G06710.15 20.833 360 256 6 130 472 424 771 3.75e-11 66.2
Msa1252190 AT1G06710.18 20.833 360 256 6 130 472 424 771 3.75e-11 66.2
Msa1252190 AT1G06710.17 20.833 360 256 6 130 472 424 771 3.75e-11 66.2
Msa1252190 AT1G06710.14 20.833 360 256 6 130 472 424 771 3.75e-11 66.2
Msa1252190 AT1G06710.16 20.833 360 256 6 130 472 424 771 3.75e-11 66.2
Msa1252190 AT1G06710.10 20.833 360 256 6 130 472 424 771 3.75e-11 66.2
Msa1252190 AT1G06710.11 20.833 360 256 6 130 472 424 771 3.75e-11 66.2
Msa1252190 AT1G06710.7 20.833 360 256 6 130 472 424 771 3.80e-11 66.2
Msa1252190 AT1G06710.1 20.833 360 256 6 130 472 424 771 3.80e-11 66.2
Msa1252190 AT1G06710.9 20.833 360 256 6 130 472 424 771 3.80e-11 66.2
Msa1252190 AT1G06710.4 20.833 360 256 6 130 472 424 771 3.80e-11 66.2
Msa1252190 AT1G06710.13 20.833 360 256 6 130 472 424 771 3.80e-11 66.2
Msa1252190 AT1G06710.3 20.833 360 256 6 130 472 424 771 3.80e-11 66.2
Msa1252190 AT1G06710.8 20.833 360 256 6 130 472 424 771 3.80e-11 66.2
Msa1252190 AT1G06710.2 20.833 360 256 6 130 472 424 771 3.80e-11 66.2
Msa1252190 AT1G06710.19 20.833 360 256 6 130 472 424 771 3.80e-11 66.2
Msa1252190 AT1G06710.5 20.833 360 256 6 130 472 424 771 3.80e-11 66.2
Msa1252190 AT1G06710.6 20.833 360 256 6 130 472 424 771 3.80e-11 66.2
Msa1252190 AT1G06710.12 20.833 360 256 6 130 472 424 771 3.80e-11 66.2
Msa1252190 AT5G14770.2 24.084 382 237 12 65 400 306 680 3.85e-11 66.2
Msa1252190 AT5G14770.5 24.084 382 237 12 65 400 306 680 3.85e-11 66.2
Msa1252190 AT5G14770.4 24.084 382 237 12 65 400 306 680 3.85e-11 66.2
Msa1252190 AT5G14770.1 24.084 382 237 12 65 400 306 680 3.85e-11 66.2
Msa1252190 AT5G14770.3 24.084 382 237 12 65 400 306 680 3.85e-11 66.2
Msa1252190 AT4G39620.2 23.320 253 185 6 122 370 207 454 4.09e-11 65.5
Msa1252190 AT1G22960.1 21.756 262 200 3 138 399 218 474 4.18e-11 65.9
Msa1252190 AT1G22960.2 21.756 262 200 3 138 399 218 474 4.18e-11 65.9
Msa1252190 AT3G48810.1 21.409 369 270 8 122 484 180 534 4.24e-11 65.9
Msa1252190 AT1G02420.1 23.636 165 125 1 126 290 249 412 4.87e-11 65.5
Msa1252190 AT5G28370.1 27.922 154 109 2 126 278 514 666 5.24e-11 65.5
Msa1252190 AT1G63130.1 20.052 384 260 5 38 416 271 612 5.31e-11 65.5
Msa1252190 AT1G63130.2 20.052 384 260 5 38 416 271 612 5.31e-11 65.5
Msa1252190 AT3G61520.1 27.922 154 109 2 126 278 514 666 5.61e-11 65.5
Msa1252190 AT5G28460.1 27.922 154 109 2 126 278 514 666 6.62e-11 65.5
Msa1252190 AT5G39710.1 21.237 372 280 6 104 471 184 546 6.89e-11 65.1
Msa1252190 AT3G22670.1 24.294 177 132 2 97 272 246 421 9.36e-11 64.7
Msa1252190 AT5G16420.1 22.823 333 240 7 129 457 197 516 9.65e-11 64.7
Msa1252190 AT5G16420.3 22.823 333 240 7 129 457 197 516 9.65e-11 64.7
Msa1252190 AT5G16420.4 22.823 333 240 7 129 457 197 516 9.65e-11 64.7
Msa1252190 AT5G16420.2 22.823 333 240 7 129 457 197 516 9.65e-11 64.7

Find 111 sgRNAs with CRISPR-Local

Find 222 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTGCAGTTAATGATATTTC+TGG 0.193804 8_2:+49013623 Msa1252190:CDS
TTTGAATATGATTCAGGTTT+TGG 0.220843 8_2:+49013919 Msa1252190:CDS
TTTGCTTCTCCGAGAAAATT+AGG 0.246831 8_2:+49011446 Msa1252190:five_prime_UTR
ATTACATTGTATGGGAAAAT+AGG 0.247775 8_2:+49013824 Msa1252190:CDS
CAGTTTCTAATTACATTGTA+TGG 0.264475 8_2:+49013815 Msa1252190:CDS
AAGCTATTTGAATATGATTC+AGG 0.264761 8_2:+49013913 Msa1252190:CDS
TGTCTACACCAACCATTATA+TGG 0.278489 8_2:+49014642 Msa1252190:three_prime_UTR
ATATAGCCTCAAGCAACTTC+TGG 0.281182 8_2:-49014453 None:intergenic
GTGGGAAGCGCGTTTATAAA+TGG 0.289722 8_2:+49011670 Msa1252190:CDS
GCAAAGTATATGAGGTCTAT+AGG 0.314428 8_2:+49013846 Msa1252190:CDS
CCAAGCTATACATATTGATT+TGG 0.317319 8_2:+49013289 Msa1252190:CDS
GAAGTGGCGCATGCCGTATA+TGG 0.327899 8_2:+49014567 Msa1252190:three_prime_UTR
CTCAATCAGTTTATTAAGAG+TGG 0.356618 8_2:+49011651 Msa1252190:CDS
CTTATATTGAAAACCATATA+CGG 0.357585 8_2:-49014580 None:intergenic
AGGAGCGTGCTCGGAGGAGG+GGG 0.367351 8_2:+49014083 Msa1252190:CDS
ATAGGGTCTGGCGGTCTCTT+AGG 0.369780 8_2:+49013864 Msa1252190:CDS
ATTATATCAACCTGCGCTTA+AGG 0.382832 8_2:+49011731 Msa1252190:CDS
CGGAAACATTTCTCTGCTCC+TGG 0.390524 8_2:-49013959 None:intergenic
AGCCTTCATTTCTTGAATGA+TGG 0.403255 8_2:-49013549 None:intergenic
GATTCAAAATTCACCGTTGT+AGG 0.415925 8_2:-49011485 None:intergenic
AGAAGGTGCACTTAAGGAAT+TGG 0.419645 8_2:+49013757 Msa1252190:CDS
GGTCTTTATCATATTCCTCT+TGG 0.420345 8_2:-49013258 None:intergenic
AAGAGGGACGGTCGAGTCAC+TGG 0.436839 8_2:+49013671 Msa1252190:CDS
TAAAGTCTGCATTCCGCAAA+TGG 0.437007 8_2:-49014147 None:intergenic
ATGACTCTTTATACTAAAGT+AGG 0.440667 8_2:+49013506 Msa1252190:CDS
ACATTATATGTGTAAGAATC+CGG 0.442518 8_2:-49013584 None:intergenic
TAAAGGAGCGTGCTCGGAGG+AGG 0.446366 8_2:+49014080 Msa1252190:CDS
TATACTGAGAAACCATATAA+TGG 0.452156 8_2:-49014654 None:intergenic
ATTCTTACACATATAATGTA+TGG 0.452805 8_2:+49013588 Msa1252190:CDS
CGCGTTTATAAATGGGAAGT+TGG 0.453242 8_2:+49011678 Msa1252190:CDS
CAAAGTATATGAGGTCTATA+GGG 0.454086 8_2:+49013847 Msa1252190:CDS
TGATATTTCTGGTGTTGAAA+GGG 0.469920 8_2:+49013634 Msa1252190:CDS
ATGATATTTCTGGTGTTGAA+AGG 0.474746 8_2:+49013633 Msa1252190:CDS
TATAGCCTCAAGCAACTTCT+GGG 0.476672 8_2:-49014452 None:intergenic
AAAGGAGCGTGCTCGGAGGA+GGG 0.478966 8_2:+49014081 Msa1252190:CDS
CGGAGAAGCAAAAGCGGAAG+AGG 0.479652 8_2:-49011435 None:intergenic
AGAAATCTGTGGAATCTGTT+GGG 0.480158 8_2:+49014323 Msa1252190:CDS
AAGAAATCTGTGGAATCTGT+TGG 0.481388 8_2:+49014322 Msa1252190:CDS
ATACCTATTGTCTCAGATGA+TGG 0.482076 8_2:-49014235 None:intergenic
GAAGGCAGAAGGTGCACTTA+AGG 0.485117 8_2:+49013751 Msa1252190:CDS
TGGGAAGCGCGTTTATAAAT+GGG 0.485728 8_2:+49011671 Msa1252190:CDS
GTTCCATCATCTGAGACAAT+AGG 0.486056 8_2:+49014232 Msa1252190:CDS
GGTGTAGACATTCCTTCAAA+AGG 0.486586 8_2:-49014629 None:intergenic
TTATCCGAAGCAATCTCAAT+TGG 0.493361 8_2:+49014187 Msa1252190:CDS
TCTACCAATTGAGATTGCTT+CGG 0.494263 8_2:-49014191 None:intergenic
CCAAATCAATATGTATAGCT+TGG 0.496342 8_2:-49013289 None:intergenic
AGTTTCTAATTACATTGTAT+GGG 0.497547 8_2:+49013816 Msa1252190:CDS
GTCCATCATTCAAGAAATGA+AGG 0.501806 8_2:+49013547 Msa1252190:CDS
GCGGAATGCAGACTTTAAGT+TGG 0.503435 8_2:+49014153 Msa1252190:CDS
ACGGTCGAGTCACTGGAGAT+TGG 0.505652 8_2:+49013678 Msa1252190:CDS
ATTAGAACTTATGCCGCTGC+TGG 0.507177 8_2:+49014367 Msa1252190:CDS
GAGCAAGAGAAGGATGTTGA+TGG 0.508667 8_2:+49014274 Msa1252190:CDS
ATCTCAATTGGTAGAGGGAA+TGG 0.512168 8_2:+49014199 Msa1252190:CDS
AAGGAGCGTGCTCGGAGGAG+GGG 0.512913 8_2:+49014082 Msa1252190:CDS
TATATGAGGTCTATAGGGTC+TGG 0.513859 8_2:+49013852 Msa1252190:CDS
ATATGCAAAATTAGATATGC+TGG 0.523030 8_2:+49014042 Msa1252190:CDS
CGCTTAAGAAGCTGAGACAA+CGG 0.525030 8_2:+49011706 Msa1252190:CDS
ATAATAAGAAAGATAAATCA+AGG 0.525713 8_2:-49014686 None:intergenic
ATGTCTCTGATGCAACGTTA+CGG 0.528194 8_2:+49011525 Msa1252190:CDS
TGCAGACTTTAAGTTGGCGG+TGG 0.532018 8_2:+49014159 Msa1252190:CDS
AAAAGAATCATGAGGTTGCA+TGG 0.532660 8_2:-49014709 None:intergenic
CAGAGAAATGTTTCCGTGAG+TGG 0.534189 8_2:+49013966 Msa1252190:CDS
GAGACATTGTTGCTCAGTGA+TGG 0.534809 8_2:-49011509 None:intergenic
TGTGGAATCTGTTGGGGAAG+AGG 0.535027 8_2:+49014330 Msa1252190:CDS
GGAGAAGGCTGAAGAACTAA+AGG 0.536610 8_2:+49014063 Msa1252190:CDS
AAGAACTAAAGGAGCGTGCT+CGG 0.537452 8_2:+49014074 Msa1252190:CDS
TAGAGGGAATGGTGAAAAGT+GGG 0.538860 8_2:+49014210 Msa1252190:CDS
GGGTTATTGATGAGATGAAG+AGG 0.539631 8_2:+49013654 Msa1252190:CDS
TTCATTTCTTGAATGATGGA+CGG 0.540856 8_2:-49013545 None:intergenic
GTAGAGGGAATGGTGAAAAG+TGG 0.542141 8_2:+49014209 Msa1252190:CDS
TCAATCAGTTTATTAAGAGT+GGG 0.543955 8_2:+49011652 Msa1252190:CDS
CACTTTCTTCATTCCTACAA+CGG 0.548430 8_2:+49011472 Msa1252190:five_prime_UTR
CACTTAAGGAATTGGAAAAG+AGG 0.555566 8_2:+49013765 Msa1252190:CDS
GGTCTGGCGGTCTCTTAGGT+TGG 0.556962 8_2:+49013868 Msa1252190:CDS
GAATGCAGACTTTAAGTTGG+CGG 0.558777 8_2:+49014156 Msa1252190:CDS
GAAGCAATCTCAATTGGTAG+AGG 0.560595 8_2:+49014193 Msa1252190:CDS
TATGAAACGACGATTGAAGA+TGG 0.562202 8_2:+49014405 Msa1252190:CDS
GGTTATTGATGAGATGAAGA+GGG 0.563994 8_2:+49013655 Msa1252190:CDS
AAAATTAGATATGCTGGAGA+AGG 0.565481 8_2:+49014048 Msa1252190:CDS
GAAAATAGGCAAAGTATATG+AGG 0.565787 8_2:+49013838 Msa1252190:CDS
AAGGAATTGGAAAAGAGGAA+TGG 0.570113 8_2:+49013770 Msa1252190:CDS
GGAGCGTGCTCGGAGGAGGG+GGG 0.575173 8_2:+49014084 Msa1252190:CDS
TACTTGAAACTCTTCAAAGA+CGG 0.580431 8_2:+49011600 Msa1252190:CDS
AGAGAAATGTTTCCGTGAGT+GGG 0.581496 8_2:+49013967 Msa1252190:CDS
CGAAATCTTGAAGAAATCTG+TGG 0.586042 8_2:+49014312 Msa1252190:CDS
CTGAGAAACCATATAATGGT+TGG 0.586834 8_2:-49014650 None:intergenic
GGAAACATTTCTCTGCTCCT+GGG 0.587345 8_2:-49013958 None:intergenic
GAACTTATGCCGCTGCTGGT+AGG 0.590784 8_2:+49014371 Msa1252190:CDS
GATTTGGTTGCAAAAGCTAG+AGG 0.596922 8_2:+49013305 Msa1252190:CDS
AATTTACATGAATCACTCCT+CGG 0.599378 8_2:-49014476 None:intergenic
TGCAGCTCGACTCCCACTCA+CGG 0.604824 8_2:-49013979 None:intergenic
ATGTATAGCTTGGTCACTGA+CGG 0.607677 8_2:-49013279 None:intergenic
CATCAACATAAATAGACGCA+AGG 0.616654 8_2:-49013715 None:intergenic
TTGAAACTCTTCAAAGACGG+TGG 0.620058 8_2:+49011603 Msa1252190:CDS
AACATGTTTGAGAAGGCAGA+AGG 0.623532 8_2:+49013740 Msa1252190:CDS
AAGCAATCTCAATTGGTAGA+GGG 0.624857 8_2:+49014194 Msa1252190:CDS
GAAGGCTAGCAATATCATGC+CGG 0.629396 8_2:+49013565 Msa1252190:CDS
AGCACTTGTCCTACCAGCAG+CGG 0.633534 8_2:-49014380 None:intergenic
GAAGCACTACGAGCAAGAGA+AGG 0.634627 8_2:+49014264 Msa1252190:CDS
GTTAACTTGAAAGATCTCCC+AGG 0.640592 8_2:+49013941 Msa1252190:CDS
TTATAAGACAGTGAACTCAA+AGG 0.644951 8_2:-49013476 None:intergenic
TGATGCTAACATGTTTGAGA+AGG 0.651168 8_2:+49013733 Msa1252190:CDS
ATGAGGTCTATAGGGTCTGG+CGG 0.666314 8_2:+49013855 Msa1252190:CDS
TATCAGAAACAACGGCCAAG+AGG 0.667981 8_2:+49013243 Msa1252190:CDS
ATTGATGAGATGAAGAGGGA+CGG 0.670634 8_2:+49013659 Msa1252190:CDS
GAAATCTGTGGAATCTGTTG+GGG 0.676021 8_2:+49014324 Msa1252190:CDS
GTTGCTTGAGGCTATATCCG+AGG 0.682538 8_2:+49014459 Msa1252190:CDS
TTGATGACTGATAAAGCTGA+AGG 0.689860 8_2:+49013422 Msa1252190:CDS
AGATACCCAGAAGTTGCTTG+AGG 0.693369 8_2:+49014447 Msa1252190:CDS
AACTAAAGGAGCGTGCTCGG+AGG 0.698646 8_2:+49014077 Msa1252190:CDS
GTTGCAGCTATCAGAAACAA+CGG 0.704069 8_2:+49013235 Msa1252190:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAAAAATAAGATTATATAT+TGG + chr8_2:49011817-49011836 Msa1252190:intron 10.0%
!!! GTTGTTTTTATAAACTATTT+TGG + chr8_2:49012028-49012047 Msa1252190:intron 15.0%
!! TATGAAAATAAGCTAAAAAA+AGG + chr8_2:49012057-49012076 Msa1252190:intron 15.0%
!! AATAAAATGATATATTAGCT+TGG + chr8_2:49012730-49012749 Msa1252190:intron 15.0%
!!! ATAAAATGATATATTAGCTT+GGG + chr8_2:49012731-49012750 Msa1252190:intron 15.0%
!!! GCAAATTGTTAATTTTTTTT+TGG + chr8_2:49012868-49012887 Msa1252190:intron 15.0%
!! ATAATAAGAAAGATAAATCA+AGG - chr8_2:49014689-49014708 None:intergenic 15.0%
!!! AATAAGATTATATATTGGCT+TGG + chr8_2:49011822-49011841 Msa1252190:intron 20.0%
!! CATATACACTTAACATATAA+GGG + chr8_2:49012307-49012326 Msa1252190:intron 20.0%
!!! GGGTTAACTTTTTTTTTTTT+TGG - chr8_2:49012654-49012673 None:intergenic 20.0%
!! TATCATAGAATCATAAAATG+AGG + chr8_2:49012773-49012792 Msa1252190:intron 20.0%
!! TGTTCCATAATTTATATTCA+TGG + chr8_2:49013193-49013212 Msa1252190:intron 20.0%
!! TTCTCCATGAATATAAATTA+TGG - chr8_2:49013200-49013219 None:intergenic 20.0%
!! ATTCTTACACATATAATGTA+TGG + chr8_2:49013588-49013607 Msa1252190:CDS 20.0%
!! AGTTTCTAATTACATTGTAT+GGG + chr8_2:49013816-49013835 Msa1252190:CDS 20.0%
!!! AAAAACTTGGGAAATATTTT+TGG + chr8_2:49014120-49014139 Msa1252190:CDS 20.0%
!!! TCAATTTAAACATTTTGAAG+TGG + chr8_2:49014551-49014570 Msa1252190:three_prime_UTR 20.0%
!! CTTATATTGAAAACCATATA+CGG - chr8_2:49014583-49014602 None:intergenic 20.0%
!!! TATATGGTTTTCAATATAAG+AGG + chr8_2:49014583-49014602 Msa1252190:three_prime_UTR 20.0%
!! AAAGTGAAACCTAATTTTCT+CGG - chr8_2:49011458-49011477 None:intergenic 25.0%
! TCAATCAGTTTATTAAGAGT+GGG + chr8_2:49011652-49011671 Msa1252190:CDS 25.0%
!!! TACATTTAAGCGCTTTTTTT+AGG + chr8_2:49011760-49011779 Msa1252190:intron 25.0%
!!! AATGTAGTTTTTTGGTACAT+AGG + chr8_2:49011851-49011870 Msa1252190:intron 25.0%
!!! ATGTAGTTTTTTGGTACATA+GGG + chr8_2:49011852-49011871 Msa1252190:intron 25.0%
!!! ATTGTTTTTGTATATGCTGT+AGG + chr8_2:49012006-49012025 Msa1252190:intron 25.0%
! GAGTTGTAGTTTATGAAATA+TGG + chr8_2:49012185-49012204 Msa1252190:intron 25.0%
! GCTATATCTATATGTTTCTT+AGG + chr8_2:49012247-49012266 Msa1252190:intron 25.0%
! GCATATACACTTAACATATA+AGG + chr8_2:49012306-49012325 Msa1252190:intron 25.0%
!! ACTAAGTTGAAAATAATCGA+TGG + chr8_2:49012430-49012449 Msa1252190:intron 25.0%
!!! GTTAATTTTTTTTTGGTGTG+TGG + chr8_2:49012875-49012894 Msa1252190:intron 25.0%
! ATGACTCTTTATACTAAAGT+AGG + chr8_2:49013506-49013525 Msa1252190:CDS 25.0%
! ACATTATATGTGTAAGAATC+CGG - chr8_2:49013587-49013606 None:intergenic 25.0%
! CAGTTTCTAATTACATTGTA+TGG + chr8_2:49013815-49013834 Msa1252190:CDS 25.0%
! ATTACATTGTATGGGAAAAT+AGG + chr8_2:49013824-49013843 Msa1252190:CDS 25.0%
! AAGCTATTTGAATATGATTC+AGG + chr8_2:49013913-49013932 Msa1252190:CDS 25.0%
!!! TTTGAATATGATTCAGGTTT+TGG + chr8_2:49013919-49013938 Msa1252190:CDS 25.0%
! ATATGCAAAATTAGATATGC+TGG + chr8_2:49014042-49014061 Msa1252190:CDS 25.0%
!!! TATTTTTGGATTACCATTTG+CGG + chr8_2:49014134-49014153 Msa1252190:CDS 25.0%
! TATACTGAGAAACCATATAA+TGG - chr8_2:49014657-49014676 None:intergenic 25.0%
TACTTGAAACTCTTCAAAGA+CGG + chr8_2:49011600-49011619 Msa1252190:CDS 30.0%
CTCAATCAGTTTATTAAGAG+TGG + chr8_2:49011651-49011670 Msa1252190:CDS 30.0%
!!! GGATCTAGAATGTAGTTTTT+TGG + chr8_2:49011843-49011862 Msa1252190:intron 30.0%
TCAAATTAGCCAATCTAGAA+GGG + chr8_2:49012154-49012173 Msa1252190:intron 30.0%
CATAAACTACAACTCACTAA+GGG - chr8_2:49012180-49012199 None:intergenic 30.0%
TCATAAACTACAACTCACTA+AGG - chr8_2:49012181-49012200 None:intergenic 30.0%
!! TTAGCTATAAGCTGTTTTCA+TGG + chr8_2:49012386-49012405 Msa1252190:intron 30.0%
!! TAGCTATAAGCTGTTTTCAT+GGG + chr8_2:49012387-49012406 Msa1252190:intron 30.0%
AAGCATTTATGAGCATGTTT+GGG - chr8_2:49012485-49012504 None:intergenic 30.0%
TAAGCATTTATGAGCATGTT+TGG - chr8_2:49012486-49012505 None:intergenic 30.0%
ACCTAGAAACACACAAATTT+GGG - chr8_2:49012674-49012693 None:intergenic 30.0%
AACCTAGAAACACACAAATT+TGG - chr8_2:49012675-49012694 None:intergenic 30.0%
! ATGATATATTAGCTTGGGTT+TGG + chr8_2:49012736-49012755 Msa1252190:intron 30.0%
! GTTTTTCTGCATAATTTAGC+AGG + chr8_2:49012846-49012865 Msa1252190:intron 30.0%
TAATATCCAAGCAGAACTAA+AGG - chr8_2:49012906-49012925 None:intergenic 30.0%
TCTGCTTGGATATTAATATC+AGG + chr8_2:49012911-49012930 Msa1252190:intron 30.0%
ATTGCTTATAGTGTGGTTAT+AGG + chr8_2:49012981-49013000 Msa1252190:intron 30.0%
CCAAATCAATATGTATAGCT+TGG - chr8_2:49013292-49013311 None:intergenic 30.0%
! CCAAGCTATACATATTGATT+TGG + chr8_2:49013289-49013308 Msa1252190:CDS 30.0%
!! AGGTGTCATTGAAAAAATGA+AGG + chr8_2:49013442-49013461 Msa1252190:CDS 30.0%
TTATAAGACAGTGAACTCAA+AGG - chr8_2:49013479-49013498 None:intergenic 30.0%
! TTCATTTCTTGAATGATGGA+CGG - chr8_2:49013548-49013567 None:intergenic 30.0%
!! ATGATATTTCTGGTGTTGAA+AGG + chr8_2:49013633-49013652 Msa1252190:CDS 30.0%
!! TGATATTTCTGGTGTTGAAA+GGG + chr8_2:49013634-49013653 Msa1252190:CDS 30.0%
GAAAATAGGCAAAGTATATG+AGG + chr8_2:49013838-49013857 Msa1252190:CDS 30.0%
CAAAGTATATGAGGTCTATA+GGG + chr8_2:49013847-49013866 Msa1252190:CDS 30.0%
! TAGCTTATGTTTGCAGTTTT+AGG - chr8_2:49013899-49013918 None:intergenic 30.0%
!!! GAGTTGCAAATGTTTTGATA+GGG + chr8_2:49014017-49014036 Msa1252190:CDS 30.0%
!!! AGTTGCAAATGTTTTGATAG+GGG + chr8_2:49014018-49014037 Msa1252190:CDS 30.0%
AAAATTAGATATGCTGGAGA+AGG + chr8_2:49014048-49014067 Msa1252190:CDS 30.0%
! ATTTCCCAAGTTTTTGCATT+AGG - chr8_2:49014115-49014134 None:intergenic 30.0%
AATTTACATGAATCACTCCT+CGG - chr8_2:49014479-49014498 None:intergenic 30.0%
! ATGGTTTTCAATATAAGAGG+TGG + chr8_2:49014586-49014605 Msa1252190:three_prime_UTR 30.0%
TTTGCTTCTCCGAGAAAATT+AGG + chr8_2:49011446-49011465 Msa1252190:five_prime_UTR 35.0%
CACTTTCTTCATTCCTACAA+CGG + chr8_2:49011472-49011491 Msa1252190:five_prime_UTR 35.0%
GATTCAAAATTCACCGTTGT+AGG - chr8_2:49011488-49011507 None:intergenic 35.0%
ATTATATCAACCTGCGCTTA+AGG + chr8_2:49011731-49011750 Msa1252190:CDS 35.0%
TGTAAAAATACCTTAAGCGC+AGG - chr8_2:49011744-49011763 None:intergenic 35.0%
CTCAAATTAGCCAATCTAGA+AGG + chr8_2:49012153-49012172 Msa1252190:intron 35.0%
ACCCAAATTTGTGTGTTTCT+AGG + chr8_2:49012670-49012689 Msa1252190:intron 35.0%
TGTTAGTGTCAACCTTTGTT+AGG + chr8_2:49012804-49012823 Msa1252190:intron 35.0%
GCTTGGATATTAATATCAGG+TGG + chr8_2:49012914-49012933 Msa1252190:intron 35.0%
TGGATATTAATATCAGGTGG+TGG + chr8_2:49012917-49012936 Msa1252190:intron 35.0%
GGATATTAATATCAGGTGGT+GGG + chr8_2:49012918-49012937 Msa1252190:intron 35.0%
!!! GTTTTGGTTCCTTTTGCAAT+TGG + chr8_2:49012942-49012961 Msa1252190:intron 35.0%
AGCACAAAACCAATTGCAAA+AGG - chr8_2:49012954-49012973 None:intergenic 35.0%
CAATCAAACCTCCTTAAAAC+AGG - chr8_2:49013017-49013036 None:intergenic 35.0%
GTTTGATTGTTCATTCTGTG+TGG + chr8_2:49013028-49013047 Msa1252190:intron 35.0%
!!! TGTCTGTTTTTGGTCTTTTG+TGG + chr8_2:49013052-49013071 Msa1252190:intron 35.0%
! GTCTTTTGTGGTTTCTGATT+TGG + chr8_2:49013064-49013083 Msa1252190:intron 35.0%
! GTACGTTGATGTTGATTATG+TGG + chr8_2:49013111-49013130 Msa1252190:intron 35.0%
GGTCTTTATCATATTCCTCT+TGG - chr8_2:49013261-49013280 None:intergenic 35.0%
! TTGATGACTGATAAAGCTGA+AGG + chr8_2:49013422-49013441 Msa1252190:CDS 35.0%
GTCCATCATTCAAGAAATGA+AGG + chr8_2:49013547-49013566 Msa1252190:CDS 35.0%
AGCCTTCATTTCTTGAATGA+TGG - chr8_2:49013552-49013571 None:intergenic 35.0%
GCTGCAGTTAATGATATTTC+TGG + chr8_2:49013623-49013642 Msa1252190:CDS 35.0%
GGTTATTGATGAGATGAAGA+GGG + chr8_2:49013655-49013674 Msa1252190:CDS 35.0%
CATCAACATAAATAGACGCA+AGG - chr8_2:49013718-49013737 None:intergenic 35.0%
TGATGCTAACATGTTTGAGA+AGG + chr8_2:49013733-49013752 Msa1252190:CDS 35.0%
CACTTAAGGAATTGGAAAAG+AGG + chr8_2:49013765-49013784 Msa1252190:CDS 35.0%
AAGGAATTGGAAAAGAGGAA+TGG + chr8_2:49013770-49013789 Msa1252190:CDS 35.0%
GCAAAGTATATGAGGTCTAT+AGG + chr8_2:49013846-49013865 Msa1252190:CDS 35.0%
!!! CGAGTTGCAAATGTTTTGAT+AGG + chr8_2:49014016-49014035 Msa1252190:CDS 35.0%
CAAGCCTAATGCAAAAACTT+GGG + chr8_2:49014108-49014127 Msa1252190:CDS 35.0%
TTATCCGAAGCAATCTCAAT+TGG + chr8_2:49014187-49014206 Msa1252190:CDS 35.0%
TCTACCAATTGAGATTGCTT+CGG - chr8_2:49014194-49014213 None:intergenic 35.0%
AAGCAATCTCAATTGGTAGA+GGG + chr8_2:49014194-49014213 Msa1252190:CDS 35.0%
ATACCTATTGTCTCAGATGA+TGG - chr8_2:49014238-49014257 None:intergenic 35.0%
CGAAATCTTGAAGAAATCTG+TGG + chr8_2:49014312-49014331 Msa1252190:CDS 35.0%
AAGAAATCTGTGGAATCTGT+TGG + chr8_2:49014322-49014341 Msa1252190:CDS 35.0%
AGAAATCTGTGGAATCTGTT+GGG + chr8_2:49014323-49014342 Msa1252190:CDS 35.0%
TATGAAACGACGATTGAAGA+TGG + chr8_2:49014405-49014424 Msa1252190:CDS 35.0%
! ATTCACTCATCTCCTTTTGA+AGG + chr8_2:49014617-49014636 Msa1252190:three_prime_UTR 35.0%
TGTCTACACCAACCATTATA+TGG + chr8_2:49014642-49014661 Msa1252190:three_prime_UTR 35.0%
CTGAGAAACCATATAATGGT+TGG - chr8_2:49014653-49014672 None:intergenic 35.0%
AAAAGAATCATGAGGTTGCA+TGG - chr8_2:49014712-49014731 None:intergenic 35.0%
! TTTTCTCGGAGAAGCAAAAG+CGG - chr8_2:49011444-49011463 None:intergenic 40.0%
ATGTCTCTGATGCAACGTTA+CGG + chr8_2:49011525-49011544 Msa1252190:CDS 40.0%
TTGAAACTCTTCAAAGACGG+TGG + chr8_2:49011603-49011622 Msa1252190:CDS 40.0%
! TGGGAAGCGCGTTTATAAAT+GGG + chr8_2:49011671-49011690 Msa1252190:CDS 40.0%
CGCGTTTATAAATGGGAAGT+TGG + chr8_2:49011678-49011697 Msa1252190:CDS 40.0%
AACTTATGCTCTGCTCTGTT+TGG + chr8_2:49011889-49011908 Msa1252190:intron 40.0%
AGTCAATCCAAAAACCCACT+TGG + chr8_2:49012528-49012547 Msa1252190:intron 40.0%
CCAAATTAGTGCACCGAAAT+TGG - chr8_2:49012628-49012647 None:intergenic 40.0%
! CCAATTTCGGTGCACTAATT+TGG + chr8_2:49012625-49012644 Msa1252190:intron 40.0%
! ATATTAGCTTGGGTTTGGAG+TGG + chr8_2:49012741-49012760 Msa1252190:intron 40.0%
ACCTTTGTTAGGCAAGGTAA+AGG + chr8_2:49012815-49012834 Msa1252190:intron 40.0%
ACCTTTACCTTGCCTAACAA+AGG - chr8_2:49012819-49012838 None:intergenic 40.0%
!! GAATAGCCTTTAGTTCTGCT+TGG + chr8_2:49012897-49012916 Msa1252190:intron 40.0%
GCTTATAGTGTGGTTATAGG+TGG + chr8_2:49012984-49013003 Msa1252190:intron 40.0%
! GTGGATTTGTGCCTGTTTTA+AGG + chr8_2:49013003-49013022 Msa1252190:intron 40.0%
!!! GATTTGTGCCTGTTTTAAGG+AGG + chr8_2:49013006-49013025 Msa1252190:intron 40.0%
! TCTGTGTGGTTGTCTGTTTT+TGG + chr8_2:49013042-49013061 Msa1252190:intron 40.0%
!! TCTGATTTGGCTTAGACTCT+TGG + chr8_2:49013077-49013096 Msa1252190:intron 40.0%
! TCTCTAAATCTAGAGCTGCA+TGG - chr8_2:49013154-49013173 None:intergenic 40.0%
GTTGCAGCTATCAGAAACAA+CGG + chr8_2:49013235-49013254 Msa1252190:intron 40.0%
ATGTATAGCTTGGTCACTGA+CGG - chr8_2:49013282-49013301 None:intergenic 40.0%
! GATTTGGTTGCAAAAGCTAG+AGG + chr8_2:49013305-49013324 Msa1252190:CDS 40.0%
! AGATGATTTTTCGCAGACTC+GGG - chr8_2:49013365-49013384 None:intergenic 40.0%
! CAGATGATTTTTCGCAGACT+CGG - chr8_2:49013366-49013385 None:intergenic 40.0%
GCGAAAAATCATCTGTGCTA+TGG + chr8_2:49013371-49013390 Msa1252190:CDS 40.0%
!!! ATGATGGACGGAATCTTTTC+TGG - chr8_2:49013536-49013555 None:intergenic 40.0%
GGGTTATTGATGAGATGAAG+AGG + chr8_2:49013654-49013673 Msa1252190:CDS 40.0%
ATTGATGAGATGAAGAGGGA+CGG + chr8_2:49013659-49013678 Msa1252190:CDS 40.0%
AACATGTTTGAGAAGGCAGA+AGG + chr8_2:49013740-49013759 Msa1252190:CDS 40.0%
! AGAAGGTGCACTTAAGGAAT+TGG + chr8_2:49013757-49013776 Msa1252190:CDS 40.0%
TATATGAGGTCTATAGGGTC+TGG + chr8_2:49013852-49013871 Msa1252190:CDS 40.0%
! GTTAACTTGAAAGATCTCCC+AGG + chr8_2:49013941-49013960 Msa1252190:CDS 40.0%
AGAGAAATGTTTCCGTGAGT+GGG + chr8_2:49013967-49013986 Msa1252190:CDS 40.0%
! CCAAGTTTTTGCATTAGGCT+TGG - chr8_2:49014110-49014129 None:intergenic 40.0%
CCAAGCCTAATGCAAAAACT+TGG + chr8_2:49014107-49014126 Msa1252190:CDS 40.0%
TAAAGTCTGCATTCCGCAAA+TGG - chr8_2:49014150-49014169 None:intergenic 40.0%
!! GAATGCAGACTTTAAGTTGG+CGG + chr8_2:49014156-49014175 Msa1252190:CDS 40.0%
GAAGCAATCTCAATTGGTAG+AGG + chr8_2:49014193-49014212 Msa1252190:CDS 40.0%
ATCTCAATTGGTAGAGGGAA+TGG + chr8_2:49014199-49014218 Msa1252190:CDS 40.0%
TAGAGGGAATGGTGAAAAGT+GGG + chr8_2:49014210-49014229 Msa1252190:CDS 40.0%
! GTTCCATCATCTGAGACAAT+AGG + chr8_2:49014232-49014251 Msa1252190:CDS 40.0%
GAAATCTGTGGAATCTGTTG+GGG + chr8_2:49014324-49014343 Msa1252190:CDS 40.0%
TATAGCCTCAAGCAACTTCT+GGG - chr8_2:49014455-49014474 None:intergenic 40.0%
ATATAGCCTCAAGCAACTTC+TGG - chr8_2:49014456-49014475 None:intergenic 40.0%
GGTGTAGACATTCCTTCAAA+AGG - chr8_2:49014632-49014651 None:intergenic 40.0%
GAGACATTGTTGCTCAGTGA+TGG - chr8_2:49011512-49011531 None:intergenic 45.0%
! GTGGGAAGCGCGTTTATAAA+TGG + chr8_2:49011670-49011689 Msa1252190:CDS 45.0%
CGCTTAAGAAGCTGAGACAA+CGG + chr8_2:49011706-49011725 Msa1252190:CDS 45.0%
ATCCAAAAACCCACTTGGCT+TGG + chr8_2:49012533-49012552 Msa1252190:intron 45.0%
AACGAACTTGAGACCTTGAG+AGG - chr8_2:49012594-49012613 None:intergenic 45.0%
GTCTCAAGTTCGTTTCTCTC+CGG + chr8_2:49012600-49012619 Msa1252190:intron 45.0%
! TTTCTCTCCGGTGCCAATTT+CGG + chr8_2:49012612-49012631 Msa1252190:intron 45.0%
GTGTCAACCTTTGTTAGGCA+AGG + chr8_2:49012809-49012828 Msa1252190:intron 45.0%
!!! ATATCAGGTGGTGGGTGTTT+TGG + chr8_2:49012926-49012945 Msa1252190:intron 45.0%
!!! CAATTGGTTTTGTGCTAGCG+TGG + chr8_2:49012958-49012977 Msa1252190:intron 45.0%
! AGCGTGGATTGCTTATAGTG+TGG + chr8_2:49012974-49012993 Msa1252190:intron 45.0%
GTTGATTATGTGGTCGTGTC+TGG + chr8_2:49013121-49013140 Msa1252190:intron 45.0%
TATCAGAAACAACGGCCAAG+AGG + chr8_2:49013243-49013262 Msa1252190:CDS 45.0%
! GATGATTTTTCGCAGACTCG+GGG - chr8_2:49013364-49013383 None:intergenic 45.0%
GAAGGCTAGCAATATCATGC+CGG + chr8_2:49013565-49013584 Msa1252190:CDS 45.0%
GGAAACATTTCTCTGCTCCT+GGG - chr8_2:49013961-49013980 None:intergenic 45.0%
CAGAGAAATGTTTCCGTGAG+TGG + chr8_2:49013966-49013985 Msa1252190:CDS 45.0%
GGAGAAGGCTGAAGAACTAA+AGG + chr8_2:49014063-49014082 Msa1252190:CDS 45.0%
! AAGAACTAAAGGAGCGTGCT+CGG + chr8_2:49014074-49014093 Msa1252190:CDS 45.0%
GCGGAATGCAGACTTTAAGT+TGG + chr8_2:49014153-49014172 Msa1252190:CDS 45.0%
GTAGAGGGAATGGTGAAAAG+TGG + chr8_2:49014209-49014228 Msa1252190:CDS 45.0%
GAGCAAGAGAAGGATGTTGA+TGG + chr8_2:49014274-49014293 Msa1252190:CDS 45.0%
ATTAGAACTTATGCCGCTGC+TGG + chr8_2:49014367-49014386 Msa1252190:CDS 45.0%
AGATACCCAGAAGTTGCTTG+AGG + chr8_2:49014447-49014466 Msa1252190:CDS 45.0%
CACTAAGGGCCCTTCTAGAT+TGG - chr8_2:49012166-49012185 None:intergenic 50.0%
TAGTGCACCGAAATTGGCAC+CGG - chr8_2:49012622-49012641 None:intergenic 50.0%
! GAAGGCAGAAGGTGCACTTA+AGG + chr8_2:49013751-49013770 Msa1252190:CDS 50.0%
ATGAGGTCTATAGGGTCTGG+CGG + chr8_2:49013855-49013874 Msa1252190:CDS 50.0%
CGGAAACATTTCTCTGCTCC+TGG - chr8_2:49013962-49013981 None:intergenic 50.0%
!! TGCAGACTTTAAGTTGGCGG+TGG + chr8_2:49014159-49014178 Msa1252190:CDS 50.0%
! GAAGCACTACGAGCAAGAGA+AGG + chr8_2:49014264-49014283 Msa1252190:CDS 50.0%
TGTGGAATCTGTTGGGGAAG+AGG + chr8_2:49014330-49014349 Msa1252190:CDS 50.0%
GTTGCTTGAGGCTATATCCG+AGG + chr8_2:49014459-49014478 Msa1252190:CDS 50.0%
CGGAGAAGCAAAAGCGGAAG+AGG - chr8_2:49011438-49011457 None:intergenic 55.0%
!! GGCCAAGCCAAGTGGGTTTT+TGG - chr8_2:49012538-49012557 None:intergenic 55.0%
!! AAAACCCACTTGGCTTGGCC+TGG + chr8_2:49012538-49012557 Msa1252190:intron 55.0%
! TGGTGTGGGCTTGGTACCTT+GGG + chr8_2:49012561-49012580 Msa1252190:intron 55.0%
ACGGTCGAGTCACTGGAGAT+TGG + chr8_2:49013678-49013697 Msa1252190:CDS 55.0%
ATAGGGTCTGGCGGTCTCTT+AGG + chr8_2:49013864-49013883 Msa1252190:CDS 55.0%
! AACTAAAGGAGCGTGCTCGG+AGG + chr8_2:49014077-49014096 Msa1252190:CDS 55.0%
GAACTTATGCCGCTGCTGGT+AGG + chr8_2:49014371-49014390 Msa1252190:CDS 55.0%
AGCACTTGTCCTACCAGCAG+CGG - chr8_2:49014383-49014402 None:intergenic 55.0%
GAAGTGGCGCATGCCGTATA+TGG + chr8_2:49014567-49014586 Msa1252190:three_prime_UTR 55.0%
ACCACCAGGCCAAGCCAAGT+GGG - chr8_2:49012545-49012564 None:intergenic 60.0%
!! TTGGCTTGGCCTGGTGGTGT+GGG + chr8_2:49012547-49012566 Msa1252190:intron 60.0%
! GTGGTGTGGGCTTGGTACCT+TGG + chr8_2:49012560-49012579 Msa1252190:intron 60.0%
! GGTGTGGGCTTGGTACCTTG+GGG + chr8_2:49012562-49012581 Msa1252190:intron 60.0%
! CTTGAGAGGAGCACACCCCA+AGG - chr8_2:49012580-49012599 None:intergenic 60.0%
CTTGGGGTGTGCTCCTCTCA+AGG + chr8_2:49012578-49012597 Msa1252190:intron 60.0%
AAGAGGGACGGTCGAGTCAC+TGG + chr8_2:49013671-49013690 Msa1252190:CDS 60.0%
GGTCTGGCGGTCTCTTAGGT+TGG + chr8_2:49013868-49013887 Msa1252190:CDS 60.0%
TGCAGCTCGACTCCCACTCA+CGG - chr8_2:49013982-49014001 None:intergenic 60.0%
! TAAAGGAGCGTGCTCGGAGG+AGG + chr8_2:49014080-49014099 Msa1252190:CDS 60.0%
! AAAGGAGCGTGCTCGGAGGA+GGG + chr8_2:49014081-49014100 Msa1252190:CDS 60.0%
!! ACCCACTTGGCTTGGCCTGG+TGG + chr8_2:49012541-49012560 Msa1252190:intron 65.0%
CACCACCAGGCCAAGCCAAG+TGG - chr8_2:49012546-49012565 None:intergenic 65.0%
!! CTTGGCTTGGCCTGGTGGTG+TGG + chr8_2:49012546-49012565 Msa1252190:intron 65.0%
! TTGGCCTGGTGGTGTGGGCT+TGG + chr8_2:49012552-49012571 Msa1252190:intron 65.0%
GGTACCAAGCCCACACCACC+AGG - chr8_2:49012559-49012578 None:intergenic 65.0%
! AAGGAGCGTGCTCGGAGGAG+GGG + chr8_2:49014082-49014101 Msa1252190:CDS 65.0%
! AGGAGCGTGCTCGGAGGAGG+GGG + chr8_2:49014083-49014102 Msa1252190:CDS 70.0%
GGAGCGTGCTCGGAGGAGGG+GGG + chr8_2:49014084-49014103 Msa1252190:CDS 75.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 49011434 49014731 49011434 ID=Msa1252190;Name=Msa1252190
chr8_2 mRNA 49011434 49014731 49011434 ID=Msa1252190-mRNA-1;Parent=Msa1252190;Name=Msa1252190-mRNA-1;_AED=0.00;_eAED=0.00;_QI=91|1|1|1|1|1|2|245|490
chr8_2 exon 49011434 49011752 49011434 ID=Msa1252190-mRNA-1:exon:14782;Parent=Msa1252190-mRNA-1
chr8_2 exon 49013242 49014731 49013242 ID=Msa1252190-mRNA-1:exon:14783;Parent=Msa1252190-mRNA-1
chr8_2 five_prime_UTR 49011434 49011524 49011434 ID=Msa1252190-mRNA-1:five_prime_utr;Parent=Msa1252190-mRNA-1
chr8_2 CDS 49011525 49011752 49011525 ID=Msa1252190-mRNA-1:cds;Parent=Msa1252190-mRNA-1
chr8_2 CDS 49013242 49014486 49013242 ID=Msa1252190-mRNA-1:cds;Parent=Msa1252190-mRNA-1
chr8_2 three_prime_UTR 49014487 49014731 49014487 ID=Msa1252190-mRNA-1:three_prime_utr;Parent=Msa1252190-mRNA-1
Gene Sequence

>Msa1252190

ATGTCTCTGATGCAACGTTACGGAAAATGCAAAAGCGTTGTGAAACGATCAAAAAAGTACTTAGACGAAGCGCTTTACTTGAAACTCTTCAAAGACGGTGGTTCTGAACTCAATGTTCGTCAACAGCTCAATCAGTTTATTAAGAGTGGGAAGCGCGTTTATAAATGGGAAGTTGGTGATACGCTTAAGAAGCTGAGACAACGGAAATTATATCAACCTGCGCTTAAGCTATCAGAAACAACGGCCAAGAGGAATATGATAAAGACCGTCAGTGACCAAGCTATACATATTGATTTGGTTGCAAAAGCTAGAGGTATTGTTGCTGCTGAAAAATATTTTATTGATCTCCCCGAGTCTGCGAAAAATCATCTGTGCTATGGTGCACTTCTCAACTGCTACTGCAAAGAGTTGATGACTGATAAAGCTGAAGGTGTCATTGAAAAAATGAAGGATCTTGACTTTCCTTTGAGTTCACTGTCTTATAATAGTCTTATGACTCTTTATACTAAAGTAGGTCAACCAGAAAAGATTCCGTCCATCATTCAAGAAATGAAGGCTAGCAATATCATGCCGGATTCTTACACATATAATGTATGGATGAGAGCTCTTGCTGCAGTTAATGATATTTCTGGTGTTGAAAGGGTTATTGATGAGATGAAGAGGGACGGTCGAGTCACTGGAGATTGGACAACATATAGCAACCTTGCGTCTATTTATGTTGATGCTAACATGTTTGAGAAGGCAGAAGGTGCACTTAAGGAATTGGAAAAGAGGAATGGTTACAAAGATCTTTCTGCTTATCAGTTTCTAATTACATTGTATGGGAAAATAGGCAAAGTATATGAGGTCTATAGGGTCTGGCGGTCTCTTAGGTTGGCATTTCCTAAAACTGCAAACATAAGCTATTTGAATATGATTCAGGTTTTGGTTAACTTGAAAGATCTCCCAGGAGCAGAGAAATGTTTCCGTGAGTGGGAGTCGAGCTGCAGTACTTATGATATTCGAGTTGCAAATGTTTTGATAGGGGCATATGCAAAATTAGATATGCTGGAGAAGGCTGAAGAACTAAAGGAGCGTGCTCGGAGGAGGGGGGCCAAGCCTAATGCAAAAACTTGGGAAATATTTTTGGATTACCATTTGCGGAATGCAGACTTTAAGTTGGCGGTGGATTGTTTATCCGAAGCAATCTCAATTGGTAGAGGGAATGGTGAAAAGTGGGTTCCATCATCTGAGACAATAGGTATTATGATGAAGCACTACGAGCAAGAGAAGGATGTTGATGGTGCAGAAGAATTCATCGAAATCTTGAAGAAATCTGTGGAATCTGTTGGGGAAGAGGTGTTTGAATCATTGATTAGAACTTATGCCGCTGCTGGTAGGACAAGTGCTGCTATGAAACGACGATTGAAGATGGAAAATGTGAACGTGAATGAAGATACCCAGAAGTTGCTTGAGGCTATATCCGAGGAGTGA

Protein sequence

>Msa1252190

MSLMQRYGKCKSVVKRSKKYLDEALYLKLFKDGGSELNVRQQLNQFIKSGKRVYKWEVGDTLKKLRQRKLYQPALKLSETTAKRNMIKTVSDQAIHIDLVAKARGIVAAEKYFIDLPESAKNHLCYGALLNCYCKELMTDKAEGVIEKMKDLDFPLSSLSYNSLMTLYTKVGQPEKIPSIIQEMKASNIMPDSYTYNVWMRALAAVNDISGVERVIDEMKRDGRVTGDWTTYSNLASIYVDANMFEKAEGALKELEKRNGYKDLSAYQFLITLYGKIGKVYEVYRVWRSLRLAFPKTANISYLNMIQVLVNLKDLPGAEKCFREWESSCSTYDIRVANVLIGAYAKLDMLEKAEELKERARRRGAKPNAKTWEIFLDYHLRNADFKLAVDCLSEAISIGRGNGEKWVPSSETIGIMMKHYEQEKDVDGAEEFIEILKKSVESVGEEVFESLIRTYAAAGRTSAAMKRRLKMENVNVNEDTQKLLEAISEE*