Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0243570 | XP_003594872.2 | 97.083 | 480 | 14 | 0 | 17 | 496 | 1 | 480 | 0.0 | 974 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0243570 | sp|Q84JF5|PTA14_ARATH | 69.136 | 486 | 141 | 6 | 17 | 496 | 1 | 483 | 0.0 | 691 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0243570 | G7INE0 | 97.083 | 480 | 14 | 0 | 17 | 496 | 1 | 480 | 0.0 | 974 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0243570 | TR | SET |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0094700 | Msa0243570 | 0.802012 | 6.864196e-49 | -8.615850e-47 |
| Msa0171780 | Msa0243570 | 0.801497 | 8.756360e-49 | -8.615850e-47 |
| Msa0171930 | Msa0243570 | 0.801739 | 7.811364e-49 | -8.615850e-47 |
| Msa0243570 | Msa0258380 | 0.839045 | 2.003284e-57 | -8.615850e-47 |
| Msa0243570 | Msa0367370 | 0.812121 | 4.972428e-51 | -8.615850e-47 |
| Msa0243570 | Msa0569030 | 0.817705 | 2.871006e-52 | -8.615850e-47 |
| Msa0243570 | Msa0604700 | 0.809849 | 1.543871e-50 | -8.615850e-47 |
| Msa0243570 | Msa0614400 | 0.802381 | 5.763004e-49 | -8.615850e-47 |
| Msa0243570 | Msa0764020 | 0.826018 | 3.414935e-54 | -8.615850e-47 |
| Msa0243570 | Msa0790830 | 0.800753 | 1.243253e-48 | -8.615850e-47 |
| Msa0243570 | Msa0824140 | 0.808378 | 3.190105e-50 | -8.615850e-47 |
| Msa0243570 | Msa1069450 | 0.822636 | 2.130568e-53 | -8.615850e-47 |
| Msa0243570 | Msa1408770 | 0.802122 | 6.516380e-49 | -8.615850e-47 |
| Msa0243570 | Msa1430270 | 0.811530 | 6.684728e-51 | -8.615850e-47 |
| Msa0243570 | Msa1453670 | 0.802305 | 5.975723e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0243570 | MtrunA17_Chr2g0296791 | 97.083 | 480 | 14 | 0 | 17 | 496 | 1 | 480 | 0.0 | 974 |
| Msa0243570 | MtrunA17_Chr4g0042701 | 24.766 | 428 | 242 | 16 | 111 | 495 | 80 | 470 | 3.28e-15 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0243570 | AT4G20130.1 | 69.136 | 486 | 141 | 6 | 17 | 496 | 1 | 483 | 0.0 | 691 |
| Msa0243570 | AT4G20130.3 | 73.425 | 365 | 96 | 1 | 132 | 496 | 1 | 364 | 0.0 | 582 |
| Msa0243570 | AT4G20130.2 | 73.425 | 365 | 96 | 1 | 132 | 496 | 1 | 364 | 0.0 | 582 |
Find 103 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAATATACCTAACAATTTC+TGG | 0.157228 | 2_2:-20814019 | None:intergenic |
| GAAGCTGTTTCATCATCTTT+AGG | 0.257907 | 2_2:-20809685 | None:intergenic |
| TTGTCAGTCTTCAACATATC+TGG | 0.279113 | 2_2:+20813698 | Msa0243570:CDS |
| TTCTATACAGTTCAAAGGTT+TGG | 0.279764 | 2_2:+20809552 | Msa0243570:intron |
| AACAACGAGCTTTAGAATTC+TGG | 0.294216 | 2_2:+20811738 | Msa0243570:CDS |
| GTATATCTAGGAGGAACTTT+TGG | 0.297229 | 2_2:+20811673 | Msa0243570:intron |
| CAATTTCTGGTCTTGCTTAG+AGG | 0.300747 | 2_2:-20814006 | None:intergenic |
| GTCCGAAGTATGCGAGCTTA+TGG | 0.311545 | 2_2:+20810784 | Msa0243570:CDS |
| AAGGAAGGGCCAAATGGTTT+TGG | 0.316532 | 2_2:+20810817 | Msa0243570:CDS |
| TAGAATTCTGGGAGAAGAAC+TGG | 0.318642 | 2_2:+20811750 | Msa0243570:CDS |
| TGACCAAGGGGAATTATATC+AGG | 0.327820 | 2_2:-20811134 | None:intergenic |
| TCTATACAGTTCAAAGGTTT+GGG | 0.333761 | 2_2:+20809553 | Msa0243570:intron |
| AAGAAGCTTGTTTGATAAAG+TGG | 0.337875 | 2_2:-20809420 | None:intergenic |
| TTCCTTTCTTCACTTGGGAT+TGG | 0.339331 | 2_2:-20813927 | None:intergenic |
| GCAGCCTTCCTTTCTTCACT+TGG | 0.361561 | 2_2:-20813933 | None:intergenic |
| CTTTCTTCACTTGGGATTGG+AGG | 0.363171 | 2_2:-20813924 | None:intergenic |
| TGAACGTGGGCAGGTAATAA+TGG | 0.368058 | 2_2:+20811055 | Msa0243570:intron |
| TGGCGACCCACTTACTCGTT+TGG | 0.373384 | 2_2:+20809589 | Msa0243570:CDS |
| ATTACACAGAAAATTGTTGA+TGG | 0.378977 | 2_2:+20814396 | Msa0243570:CDS |
| TTGACTGCAAAGACAACTTT+TGG | 0.380436 | 2_2:+20811421 | Msa0243570:CDS |
| AATCTTTGTGGCAGACAGAT+TGG | 0.384792 | 2_2:+20811364 | Msa0243570:intron |
| CTTAAATTTGCAGAATCCTT+GGG | 0.386476 | 2_2:+20813628 | Msa0243570:intron |
| GTTTCAACAGAAGCTTTAAC+AGG | 0.387453 | 2_2:-20809637 | None:intergenic |
| CCGTTACGGTAATACTCTTC+AGG | 0.397864 | 2_2:-20813725 | None:intergenic |
| AATCCTATCTTGTAGAAATC+AGG | 0.398262 | 2_2:-20810760 | None:intergenic |
| GATCCTGATTTCTACAAGAT+AGG | 0.398743 | 2_2:+20810757 | Msa0243570:CDS |
| ACTTAAATTTGCAGAATCCT+TGG | 0.403356 | 2_2:+20813627 | Msa0243570:intron |
| AAGCAAGACCAGAAATTGTT+AGG | 0.405616 | 2_2:+20814011 | Msa0243570:CDS |
| CCACTCTTCAGTTCACTCAA+TGG | 0.406107 | 2_2:+20809386 | Msa0243570:CDS |
| ATCTTTGTGGCAGACAGATT+GGG | 0.429709 | 2_2:+20811365 | Msa0243570:intron |
| GAGGCTGAAACAAGGGAAAT+GGG | 0.430134 | 2_2:-20809663 | None:intergenic |
| GAGTTGATAATATCAAATAT+TGG | 0.430427 | 2_2:-20811158 | None:intergenic |
| CTTGAGGTTCTTATAAATGC+TGG | 0.434356 | 2_2:+20812241 | Msa0243570:CDS |
| GGAGGCTGAAACAAGGGAAA+TGG | 0.441003 | 2_2:-20809664 | None:intergenic |
| CAGCCTTCCTTTCTTCACTT+GGG | 0.444382 | 2_2:-20813932 | None:intergenic |
| AGGCAATGCACGAATCCATC+TGG | 0.446339 | 2_2:+20813667 | Msa0243570:CDS |
| GCTAGTACTTTCATCTGCAC+TGG | 0.452982 | 2_2:-20811466 | None:intergenic |
| TTCCCTGATATAATTCCCCT+TGG | 0.459258 | 2_2:+20811131 | Msa0243570:CDS |
| ACAACGAGCTTTAGAATTCT+GGG | 0.462914 | 2_2:+20811739 | Msa0243570:CDS |
| GTTTGGGCCATGGTTATTTG+TGG | 0.467165 | 2_2:+20809569 | Msa0243570:CDS |
| CAGTTCAAAGGTTTGGGCCA+TGG | 0.468840 | 2_2:+20809559 | Msa0243570:intron |
| CTATTGTACAGTTAGTAGAT+TGG | 0.469330 | 2_2:-20814472 | None:intergenic |
| CTCCATAAGCTCGCATACTT+CGG | 0.475886 | 2_2:-20810786 | None:intergenic |
| ACAATGTTACAAAACTTTCG+TGG | 0.477031 | 2_2:-20814495 | None:intergenic |
| ACTGCCCACATGAACCTTTG+AGG | 0.479039 | 2_2:-20811909 | None:intergenic |
| TTGTAGAAATCAGGATCTAC+AGG | 0.487204 | 2_2:-20810751 | None:intergenic |
| GAACAAAGCTTACCAGCATA+AGG | 0.490671 | 2_2:-20812008 | None:intergenic |
| AACAATTTGGCTCAAACGAA+TGG | 0.492685 | 2_2:-20812189 | None:intergenic |
| GCATACACACCAAAACCATT+TGG | 0.501747 | 2_2:-20810826 | None:intergenic |
| TCTCATTGTAGAAGCAAGAT+CGG | 0.504225 | 2_2:-20811708 | None:intergenic |
| TGGGATGTGATCAAATTCTC+AGG | 0.506817 | 2_2:+20813647 | Msa0243570:CDS |
| ATCAAATATTGGATGACCAA+GGG | 0.508658 | 2_2:-20811147 | None:intergenic |
| TCTTTAGGAGGCTGAAACAA+GGG | 0.516914 | 2_2:-20809670 | None:intergenic |
| GTGAACTGAAGAGTGGAAAC+TGG | 0.523138 | 2_2:-20809379 | None:intergenic |
| CTCCAATCCCAAGTGAAGAA+AGG | 0.524529 | 2_2:+20813925 | Msa0243570:CDS |
| TGCTGGACAACGGATAAGAA+AGG | 0.527485 | 2_2:+20812258 | Msa0243570:CDS |
| CTCATTGTAGAAGCAAGATC+GGG | 0.528009 | 2_2:-20811707 | None:intergenic |
| GTTAATCTTGTTCAGCATAG+TGG | 0.529314 | 2_2:+20811852 | Msa0243570:intron |
| TAACATTGACCATACCGTTA+CGG | 0.535383 | 2_2:-20813739 | None:intergenic |
| TTGAACCTCTTCGCCGACCA+AGG | 0.541303 | 2_2:+20810860 | Msa0243570:CDS |
| ATTGTTAGCATCAATTCAAG+AGG | 0.542230 | 2_2:-20811083 | None:intergenic |
| CAAAGGTTCATGTGGGCAGT+AGG | 0.553144 | 2_2:+20811912 | Msa0243570:CDS |
| TTACTTTCTATACAGTTCAA+AGG | 0.553177 | 2_2:+20809547 | Msa0243570:intron |
| AACATGTTAATGCAAAGATA+CGG | 0.553221 | 2_2:+20813198 | Msa0243570:CDS |
| GCAGAAGTTCTATCGAGCAC+TGG | 0.557263 | 2_2:+20813831 | Msa0243570:intron |
| CAGCACGAACATTGCCAACA+TGG | 0.557449 | 2_2:+20813886 | Msa0243570:CDS |
| AGAATTCTGGGAGAAGAACT+GGG | 0.561648 | 2_2:+20811751 | Msa0243570:CDS |
| AATATGCTGATTCCTTATGC+TGG | 0.561727 | 2_2:+20811996 | Msa0243570:CDS |
| GCTGTTTCATCATCTTTAGG+AGG | 0.562065 | 2_2:-20809682 | None:intergenic |
| GCTGGACAACGGATAAGAAA+GGG | 0.563259 | 2_2:+20812259 | Msa0243570:CDS |
| AGATGATGAAACAGCTTCTG+AGG | 0.564802 | 2_2:+20809690 | Msa0243570:CDS |
| CTCACCCTTGGTCGGCGAAG+AGG | 0.565363 | 2_2:-20810865 | None:intergenic |
| TCCTGTCTTTAAAACGCCAA+TGG | 0.567322 | 2_2:-20812216 | None:intergenic |
| CTAGTACTTTCATCTGCACT+GGG | 0.569363 | 2_2:-20811465 | None:intergenic |
| GTGATCCTCAAAGGTTCATG+TGG | 0.575415 | 2_2:+20811904 | Msa0243570:CDS |
| GAGAATTTGATCACATCCCA+AGG | 0.578387 | 2_2:-20813644 | None:intergenic |
| GTCTTGCTCGTGATCCTCAA+AGG | 0.578672 | 2_2:+20811895 | Msa0243570:CDS |
| ATCTTTAGGAGGCTGAAACA+AGG | 0.580488 | 2_2:-20809671 | None:intergenic |
| CTGACAAGAAAGAATCCAGA+TGG | 0.581532 | 2_2:-20813682 | None:intergenic |
| TATCAAATATTGGATGACCA+AGG | 0.581735 | 2_2:-20811148 | None:intergenic |
| TGAAGAAAGGAAGGCTGCGA+AGG | 0.582874 | 2_2:+20813938 | Msa0243570:CDS |
| AGTCAAATGAAAACAAGAGA+AGG | 0.583863 | 2_2:-20811404 | None:intergenic |
| AATCCCAAGTGAAGAAAGGA+AGG | 0.592614 | 2_2:+20813929 | Msa0243570:CDS |
| CTTGATAGATCTCCAATGCA+AGG | 0.597179 | 2_2:-20814429 | None:intergenic |
| CCATTGAGTGAACTGAAGAG+TGG | 0.601198 | 2_2:-20809386 | None:intergenic |
| TTTCTGGTCTTGCTTAGAGG+TGG | 0.601975 | 2_2:-20814003 | None:intergenic |
| TGAACCTCTTCGCCGACCAA+GGG | 0.604145 | 2_2:+20810861 | Msa0243570:CDS |
| TCAAGCGTTCTCGTAGACTC+TGG | 0.607255 | 2_2:-20814241 | None:intergenic |
| GACCAAGGGGAATTATATCA+GGG | 0.608421 | 2_2:-20811133 | None:intergenic |
| CCTGAAGAGTATTACCGTAA+CGG | 0.614136 | 2_2:+20813725 | Msa0243570:CDS |
| AGGCTGAAACAAGGGAAATG+GGG | 0.620587 | 2_2:-20809662 | None:intergenic |
| TCAAATATTGGATGACCAAG+GGG | 0.620822 | 2_2:-20811146 | None:intergenic |
| ACATTGCCAACATGGTCAGA+TGG | 0.621351 | 2_2:+20813894 | Msa0243570:CDS |
| TTCTTATAAATGCTGGACAA+CGG | 0.630290 | 2_2:+20812248 | Msa0243570:CDS |
| ACATCTCCATCTGACCATGT+TGG | 0.639498 | 2_2:-20813900 | None:intergenic |
| TACGGTAATACTCTTCAGGA+AGG | 0.641879 | 2_2:-20813721 | None:intergenic |
| TGAGGCTACTCACCCTTGGT+CGG | 0.651450 | 2_2:-20810873 | None:intergenic |
| ACGGATAAGAAAGGGAGATG+AGG | 0.666436 | 2_2:+20812267 | Msa0243570:CDS |
| TAGCTTACTTCTAGCTACAG+AGG | 0.670222 | 2_2:+20811485 | Msa0243570:CDS |
| TGATCCTCAAAGGTTCATGT+GGG | 0.670337 | 2_2:+20811905 | Msa0243570:CDS |
| CAATAAGCAAGAAACTACCA+TGG | 0.673687 | 2_2:+20811102 | Msa0243570:CDS |
| TATCAACTCAACAAATCCAG+AGG | 0.680162 | 2_2:+20811172 | Msa0243570:CDS |
| TGGGTCGCCACAAATAACCA+TGG | 0.693090 | 2_2:-20809576 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATAAAATAATAAATAT+AGG | + | chr2_2:20812716-20812735 | Msa0243570:intron | 0.0% |
| !! | ATAATAAAATAATAAATATA+GGG | + | chr2_2:20812717-20812736 | Msa0243570:intron | 0.0% |
| !! | TAACATGTAAAATAAAATTT+AGG | - | chr2_2:20810964-20810983 | None:intergenic | 10.0% |
| !!! | TAAAAAATACGTTTTTTAAT+CGG | + | chr2_2:20811512-20811531 | Msa0243570:intron | 10.0% |
| !! | TTTATTCTTATAATATTGAT+TGG | + | chr2_2:20812370-20812389 | Msa0243570:intron | 10.0% |
| !!! | TGTAAAATTTTAATTTCATT+AGG | + | chr2_2:20814316-20814335 | Msa0243570:intron | 10.0% |
| !!! | TTTATTTATTCTACTGTTTT+TGG | + | chr2_2:20809734-20809753 | Msa0243570:intron | 15.0% |
| !!! | TTTGGTTTTTGTTTATTTAT+TGG | + | chr2_2:20809752-20809771 | Msa0243570:intron | 15.0% |
| !! | AAAGTAAGTAAAAATATAGA+CGG | + | chr2_2:20812420-20812439 | Msa0243570:intron | 15.0% |
| !! | AAAAGATGTAAAAATGGAAA+GGG | - | chr2_2:20809487-20809506 | None:intergenic | 20.0% |
| !! | AAAAAGATGTAAAAATGGAA+AGG | - | chr2_2:20809488-20809507 | None:intergenic | 20.0% |
| !! | AGAAGAAAAAGATGTAAAAA+TGG | - | chr2_2:20809493-20809512 | None:intergenic | 20.0% |
| !! | AACAGTAGAATAAATAAACA+AGG | - | chr2_2:20809732-20809751 | None:intergenic | 20.0% |
| !!! | AAAAGAATGTTACCTTTTTT+GGG | + | chr2_2:20809824-20809843 | Msa0243570:intron | 20.0% |
| !! | AGATACGAAAAATACAAAAA+TGG | + | chr2_2:20809955-20809974 | Msa0243570:intron | 20.0% |
| !! | CAATTTGTATTAAAAGACTA+TGG | + | chr2_2:20810069-20810088 | Msa0243570:intron | 20.0% |
| !! | ATAGACAAATATAATTGATG+GGG | - | chr2_2:20810297-20810316 | None:intergenic | 20.0% |
| !! | CATAGACAAATATAATTGAT+GGG | - | chr2_2:20810298-20810317 | None:intergenic | 20.0% |
| !! | TCATAGACAAATATAATTGA+TGG | - | chr2_2:20810299-20810318 | None:intergenic | 20.0% |
| !! | TCAATTATATTTGTCTATGA+AGG | + | chr2_2:20810299-20810318 | Msa0243570:intron | 20.0% |
| !!! | GTGATTTGAATTTAAAATGT+TGG | + | chr2_2:20810518-20810537 | Msa0243570:intron | 20.0% |
| !!! | GAGTTGATAATATCAAATAT+TGG | - | chr2_2:20811161-20811180 | None:intergenic | 20.0% |
| !! | TATACTTATGTGTATTTGAA+TGG | + | chr2_2:20811592-20811611 | Msa0243570:intron | 20.0% |
| !!! | TTTTTGATAAATAACAACAG+AGG | + | chr2_2:20812127-20812146 | Msa0243570:intron | 20.0% |
| !!! | AAATGTCAAATTTTCAATGT+AGG | + | chr2_2:20812486-20812505 | Msa0243570:intron | 20.0% |
| !!! | ATGATCAATGTTTTAAAAAC+CGG | + | chr2_2:20812609-20812628 | Msa0243570:intron | 20.0% |
| !!! | ATTAAGAGATATAGTTTTAG+AGG | + | chr2_2:20812901-20812920 | Msa0243570:intron | 20.0% |
| !! | AATTACAATTAAAGTGACAT+AGG | + | chr2_2:20812967-20812986 | Msa0243570:intron | 20.0% |
| !!! | ATTAGTTTCACTAACTTAAA+AGG | - | chr2_2:20813060-20813079 | None:intergenic | 20.0% |
| !! | TCACAATGAAATAATACTAA+CGG | - | chr2_2:20813106-20813125 | None:intergenic | 20.0% |
| !!! | AGAATTTTGGACATATAATT+AGG | - | chr2_2:20813140-20813159 | None:intergenic | 20.0% |
| !!! | TGAACTAAATTTTCAAAACT+CGG | - | chr2_2:20813600-20813619 | None:intergenic | 20.0% |
| !! | TATTCAAATCAGACTTATTT+AGG | + | chr2_2:20813788-20813807 | Msa0243570:intron | 20.0% |
| !! | AAAAACATATTAGAGGTTTA+AGG | - | chr2_2:20814343-20814362 | None:intergenic | 20.0% |
| !! | AGAAGAAAAAAACATATTAG+AGG | - | chr2_2:20814350-20814369 | None:intergenic | 20.0% |
| ! | TTACTTTCTATACAGTTCAA+AGG | + | chr2_2:20809547-20809566 | Msa0243570:intron | 25.0% |
| ! | AAATAAACAAGGTGGAAAAT+GGG | - | chr2_2:20809721-20809740 | None:intergenic | 25.0% |
| ! | TAAATAAACAAGGTGGAAAA+TGG | - | chr2_2:20809722-20809741 | None:intergenic | 25.0% |
| ! | AGTAGAATAAATAAACAAGG+TGG | - | chr2_2:20809729-20809748 | None:intergenic | 25.0% |
| !!! | CAAAAGAATGTTACCTTTTT+TGG | + | chr2_2:20809823-20809842 | Msa0243570:intron | 25.0% |
| ! | ATAGTTAATGATAAGTGAGT+AGG | - | chr2_2:20810141-20810160 | None:intergenic | 25.0% |
| !!! | GTTTCCAAGGTTTTAAATAA+AGG | + | chr2_2:20810208-20810227 | Msa0243570:intron | 25.0% |
| !! | AGAACCTTTATTTAAAACCT+TGG | - | chr2_2:20810215-20810234 | None:intergenic | 25.0% |
| !! | CTTTCATCGTCTAAAATTAT+AGG | - | chr2_2:20810364-20810383 | None:intergenic | 25.0% |
| !!! | CAGAGTTTTCTAAAATTTCA+AGG | + | chr2_2:20810475-20810494 | Msa0243570:intron | 25.0% |
| ! | ACTTTGGATGAATTCTTTAA+AGG | + | chr2_2:20810631-20810650 | Msa0243570:intron | 25.0% |
| ! | CTTTGGATGAATTCTTTAAA+GGG | + | chr2_2:20810632-20810651 | Msa0243570:intron | 25.0% |
| !! | TTTTGAACTAATGACTTTAG+AGG | - | chr2_2:20811211-20811230 | None:intergenic | 25.0% |
| ! | CAGATAACTAGAAAAACTAA+CGG | - | chr2_2:20811327-20811346 | None:intergenic | 25.0% |
| ! | TGTAATTGTGTAAATCTTTG+TGG | + | chr2_2:20811352-20811371 | Msa0243570:intron | 25.0% |
| !!! | TTTTTTAATCGGTAAACCAT+TGG | + | chr2_2:20811523-20811542 | Msa0243570:intron | 25.0% |
| !!! | TCATGTTGATTTGTATATCT+AGG | + | chr2_2:20811661-20811680 | Msa0243570:intron | 25.0% |
| ! | ACTAAGTAACCTCTAATATA+AGG | - | chr2_2:20812338-20812357 | None:intergenic | 25.0% |
| ! | ACAAAATGTCTATCTAGTTA+AGG | - | chr2_2:20812396-20812415 | None:intergenic | 25.0% |
| !! | TTTCATTGACATTTAGAGTT+TGG | - | chr2_2:20812469-20812488 | None:intergenic | 25.0% |
| !!! | AGAATGTTTTCTCTTGTTAT+AGG | + | chr2_2:20812557-20812576 | Msa0243570:intron | 25.0% |
| ! | TATATTTGTGTGCAGATATT+GGG | - | chr2_2:20812817-20812836 | None:intergenic | 25.0% |
| ! | TATTATTTCATTGTGAGATG+CGG | + | chr2_2:20813110-20813129 | Msa0243570:intron | 25.0% |
| ! | AACATGTTAATGCAAAGATA+CGG | + | chr2_2:20813198-20813217 | Msa0243570:CDS | 25.0% |
| ! | TTTATGCTTCAAAGAAAAAC+TGG | + | chr2_2:20813281-20813300 | Msa0243570:intron | 25.0% |
| ! | TTATGCTTCAAAGAAAAACT+GGG | + | chr2_2:20813282-20813301 | Msa0243570:intron | 25.0% |
| ! | TGAATATACCTAACAATTTC+TGG | - | chr2_2:20814022-20814041 | None:intergenic | 25.0% |
| !!! | TATGTTTCTACTTTTCTTCT+AGG | - | chr2_2:20814061-20814080 | None:intergenic | 25.0% |
| ! | ATTACACAGAAAATTGTTGA+TGG | + | chr2_2:20814396-20814415 | Msa0243570:CDS | 25.0% |
| ! | AAGAAGCTTGTTTGATAAAG+TGG | - | chr2_2:20809423-20809442 | None:intergenic | 30.0% |
| TTCTATACAGTTCAAAGGTT+TGG | + | chr2_2:20809552-20809571 | Msa0243570:intron | 30.0% | |
| TCTATACAGTTCAAAGGTTT+GGG | + | chr2_2:20809553-20809572 | Msa0243570:intron | 30.0% | |
| ATTGGTTGAAAGTAACAACT+AGG | + | chr2_2:20809770-20809789 | Msa0243570:intron | 30.0% | |
| !!! | TGTTGTTTTAACACATTCCA+GGG | - | chr2_2:20809916-20809935 | None:intergenic | 30.0% |
| AATGTGTTAAAACAACAGCT+CGG | + | chr2_2:20809919-20809938 | Msa0243570:intron | 30.0% | |
| CAAAAATGGAACATGATGTT+TGG | + | chr2_2:20809969-20809988 | Msa0243570:intron | 30.0% | |
| ! | TGATGTTTGGTAACAAAGTT+CGG | + | chr2_2:20809982-20810001 | Msa0243570:intron | 30.0% |
| TATACTGTAAACTCACAGAA+AGG | - | chr2_2:20810049-20810068 | None:intergenic | 30.0% | |
| CCACTGAGACTTTAAATTTA+AGG | - | chr2_2:20810443-20810462 | None:intergenic | 30.0% | |
| ! | CCTTAAATTTAAAGTCTCAG+TGG | + | chr2_2:20810440-20810459 | Msa0243570:intron | 30.0% |
| TATCTTGATTCCTATAAAGC+CGG | + | chr2_2:20810608-20810627 | Msa0243570:intron | 30.0% | |
| TAAAGAATTCATCCAAAGTC+CGG | - | chr2_2:20810630-20810649 | None:intergenic | 30.0% | |
| !!! | GATTTATTTTTTCCTCCAGT+TGG | + | chr2_2:20810726-20810745 | Msa0243570:intron | 30.0% |
| AATCCTATCTTGTAGAAATC+AGG | - | chr2_2:20810763-20810782 | None:intergenic | 30.0% | |
| !! | AGCTTATGGAGTTGATTTTA+AGG | + | chr2_2:20810798-20810817 | Msa0243570:CDS | 30.0% |
| !! | TATGGAGTTGATTTTAAGGA+AGG | + | chr2_2:20810802-20810821 | Msa0243570:CDS | 30.0% |
| !! | ATGGAGTTGATTTTAAGGAA+GGG | + | chr2_2:20810803-20810822 | Msa0243570:CDS | 30.0% |
| TCTTACATAGGATTTGTATG+AGG | - | chr2_2:20810894-20810913 | None:intergenic | 30.0% | |
| ATACAAATCCTATGTAAGAC+TGG | + | chr2_2:20810895-20810914 | Msa0243570:intron | 30.0% | |
| ATTGTTAGCATCAATTCAAG+AGG | - | chr2_2:20811086-20811105 | None:intergenic | 30.0% | |
| ATCAAATATTGGATGACCAA+GGG | - | chr2_2:20811150-20811169 | None:intergenic | 30.0% | |
| TATCAAATATTGGATGACCA+AGG | - | chr2_2:20811151-20811170 | None:intergenic | 30.0% | |
| AGTCAAATGAAAACAAGAGA+AGG | - | chr2_2:20811407-20811426 | None:intergenic | 30.0% | |
| GTAAGCTAAATATCAACCAA+TGG | - | chr2_2:20811542-20811561 | None:intergenic | 30.0% | |
| TGTATTTGAATGGCTACATT+TGG | + | chr2_2:20811602-20811621 | Msa0243570:intron | 30.0% | |
| !! | AAAGCAGATTCTAAAACTGT+CGG | - | chr2_2:20811633-20811652 | None:intergenic | 30.0% |
| !! | TGTTGATTTGTATATCTAGG+AGG | + | chr2_2:20811664-20811683 | Msa0243570:intron | 30.0% |
| TTCGAAAATGATAGGATAGT+TGG | - | chr2_2:20812050-20812069 | None:intergenic | 30.0% | |
| GAAAAACTTCACATCAAAAC+TGG | - | chr2_2:20812102-20812121 | None:intergenic | 30.0% | |
| !!! | AGCCAAATTGTTTTTTCCAT+TGG | + | chr2_2:20812200-20812219 | Msa0243570:CDS | 30.0% |
| TTCTTATAAATGCTGGACAA+CGG | + | chr2_2:20812248-20812267 | Msa0243570:CDS | 30.0% | |
| TGATTCCTTCCTTATATTAG+AGG | + | chr2_2:20812326-20812345 | Msa0243570:intron | 30.0% | |
| AGTAACCTCTAATATAAGGA+AGG | - | chr2_2:20812334-20812353 | None:intergenic | 30.0% | |
| TTCAATGTAGGCTAGTATAA+AGG | + | chr2_2:20812498-20812517 | Msa0243570:intron | 30.0% | |
| TTATAGGAATTTCACATCCT+CGG | + | chr2_2:20812573-20812592 | Msa0243570:intron | 30.0% | |
| GTATATTTGTGTGCAGATAT+TGG | - | chr2_2:20812818-20812837 | None:intergenic | 30.0% | |
| CAATTATTTGGTCAGATATG+GGG | - | chr2_2:20812861-20812880 | None:intergenic | 30.0% | |
| GCAATTATTTGGTCAGATAT+GGG | - | chr2_2:20812862-20812881 | None:intergenic | 30.0% | |
| TGCAATTATTTGGTCAGATA+TGG | - | chr2_2:20812863-20812882 | None:intergenic | 30.0% | |
| ATATCTGACCAAATAATTGC+AGG | + | chr2_2:20812862-20812881 | Msa0243570:intron | 30.0% | |
| TCTCTTAATTTCTGCAACAA+AGG | - | chr2_2:20812890-20812909 | None:intergenic | 30.0% | |
| ACACTTGATGTACTCAATAA+AGG | + | chr2_2:20812938-20812957 | Msa0243570:intron | 30.0% | |
| GAAGCTTGAAAAATACTAGT+TGG | + | chr2_2:20813004-20813023 | Msa0243570:intron | 30.0% | |
| AACGGTAATTTAAACATGCT+AGG | - | chr2_2:20813088-20813107 | None:intergenic | 30.0% | |
| ! | TTCTCCTAAATCCTTTTGAA+AGG | + | chr2_2:20813249-20813268 | Msa0243570:intron | 30.0% |
| CTATATTTAGGGAAGAATGT+AGG | - | chr2_2:20813387-20813406 | None:intergenic | 30.0% | |
| CTACATTCTTCCCTAAATAT+AGG | + | chr2_2:20813385-20813404 | Msa0243570:intron | 30.0% | |
| AGCATTAAGGAAGTTTGTAT+TGG | + | chr2_2:20813428-20813447 | Msa0243570:intron | 30.0% | |
| ! | ACTAAATTTTCAAAACTCGG+TGG | - | chr2_2:20813597-20813616 | None:intergenic | 30.0% |
| ACTTAAATTTGCAGAATCCT+TGG | + | chr2_2:20813627-20813646 | Msa0243570:intron | 30.0% | |
| CTTAAATTTGCAGAATCCTT+GGG | + | chr2_2:20813628-20813647 | Msa0243570:intron | 30.0% | |
| CTATTGTACAGTTAGTAGAT+TGG | - | chr2_2:20814475-20814494 | None:intergenic | 30.0% | |
| ACAATGTTACAAAACTTTCG+TGG | - | chr2_2:20814498-20814517 | None:intergenic | 30.0% | |
| ! | TGTATCACTAGTTTAGTCAA+TGG | + | chr2_2:20814534-20814553 | Msa0243570:intron | 30.0% |
| CAAAAACCAAACGAGTAAGT+GGG | - | chr2_2:20809598-20809617 | None:intergenic | 35.0% | |
| ACAAAAACCAAACGAGTAAG+TGG | - | chr2_2:20809599-20809618 | None:intergenic | 35.0% | |
| ! | GTTTCAACAGAAGCTTTAAC+AGG | - | chr2_2:20809640-20809659 | None:intergenic | 35.0% |
| ! | GAAGCTGTTTCATCATCTTT+AGG | - | chr2_2:20809688-20809707 | None:intergenic | 35.0% |
| GAAAGTAACAACTAGGACTA+AGG | + | chr2_2:20809777-20809796 | Msa0243570:intron | 35.0% | |
| ! | TGCATATGAGACCTTTTTGT+TGG | + | chr2_2:20809847-20809866 | Msa0243570:intron | 35.0% |
| ! | ATATGAGACCTTTTTGTTGG+TGG | + | chr2_2:20809850-20809869 | Msa0243570:intron | 35.0% |
| ! | TATGAGACCTTTTTGTTGGT+GGG | + | chr2_2:20809851-20809870 | Msa0243570:intron | 35.0% |
| !!! | CTGTTGTTTTAACACATTCC+AGG | - | chr2_2:20809917-20809936 | None:intergenic | 35.0% |
| CCTACGGTAACATTATAATC+TGG | - | chr2_2:20810096-20810115 | None:intergenic | 35.0% | |
| CCAGATTATAATGTTACCGT+AGG | + | chr2_2:20810093-20810112 | Msa0243570:intron | 35.0% | |
| ACTGTCTCAATCAATCTGTT+GGG | - | chr2_2:20810172-20810191 | None:intergenic | 35.0% | |
| TTGTAGAAATCAGGATCTAC+AGG | - | chr2_2:20810754-20810773 | None:intergenic | 35.0% | |
| GATCCTGATTTCTACAAGAT+AGG | + | chr2_2:20810757-20810776 | Msa0243570:CDS | 35.0% | |
| ATATTCTGAGTAGTTGTCCA+TGG | + | chr2_2:20811016-20811035 | Msa0243570:intron | 35.0% | |
| CAATAAGCAAGAAACTACCA+TGG | + | chr2_2:20811102-20811121 | Msa0243570:CDS | 35.0% | |
| ATATCAGGGAAAAACATCCA+TGG | - | chr2_2:20811122-20811141 | None:intergenic | 35.0% | |
| TCAAATATTGGATGACCAAG+GGG | - | chr2_2:20811149-20811168 | None:intergenic | 35.0% | |
| TATCAACTCAACAAATCCAG+AGG | + | chr2_2:20811172-20811191 | Msa0243570:CDS | 35.0% | |
| ! | TTGACTGCAAAGACAACTTT+TGG | + | chr2_2:20811421-20811440 | Msa0243570:CDS | 35.0% |
| ! | GACAACTTTTGGCAGTATTA+CGG | + | chr2_2:20811432-20811451 | Msa0243570:CDS | 35.0% |
| ! | GTATATCTAGGAGGAACTTT+TGG | + | chr2_2:20811673-20811692 | Msa0243570:intron | 35.0% |
| TCTCATTGTAGAAGCAAGAT+CGG | - | chr2_2:20811711-20811730 | None:intergenic | 35.0% | |
| !! | AACAACGAGCTTTAGAATTC+TGG | + | chr2_2:20811738-20811757 | Msa0243570:CDS | 35.0% |
| !! | ACAACGAGCTTTAGAATTCT+GGG | + | chr2_2:20811739-20811758 | Msa0243570:CDS | 35.0% |
| GTTAATCTTGTTCAGCATAG+TGG | + | chr2_2:20811852-20811871 | Msa0243570:intron | 35.0% | |
| !! | AATATGCTGATTCCTTATGC+TGG | + | chr2_2:20811996-20812015 | Msa0243570:CDS | 35.0% |
| !! | TAAGCTTTGTTCACCTCAAA+TGG | + | chr2_2:20812019-20812038 | Msa0243570:intron | 35.0% |
| ATAGTTGGTTAGACCATTTG+AGG | - | chr2_2:20812035-20812054 | None:intergenic | 35.0% | |
| ! | AACAATTTGGCTCAAACGAA+TGG | - | chr2_2:20812192-20812211 | None:intergenic | 35.0% |
| CGCCAATGGAAAAAACAATT+TGG | - | chr2_2:20812205-20812224 | None:intergenic | 35.0% | |
| !! | TTTTAAAGACAGGATGCTTG+AGG | + | chr2_2:20812225-20812244 | Msa0243570:CDS | 35.0% |
| CTTGAGGTTCTTATAAATGC+TGG | + | chr2_2:20812241-20812260 | Msa0243570:CDS | 35.0% | |
| TAGGCTAGTATAAAGGAACT+AGG | + | chr2_2:20812505-20812524 | Msa0243570:intron | 35.0% | |
| ATAGACACAGTGAATATGAG+AGG | - | chr2_2:20812533-20812552 | None:intergenic | 35.0% | |
| ! | TTTAAAAACCGGACTAGAGA+TGG | + | chr2_2:20812620-20812639 | Msa0243570:intron | 35.0% |
| TTTATTATCCAGCTCAACTG+TGG | - | chr2_2:20812685-20812704 | None:intergenic | 35.0% | |
| !! | TTTTAGGAAGATTGTGTGCT+TGG | - | chr2_2:20812759-20812778 | None:intergenic | 35.0% |
| TCCTAAAAAAAGAAACACCG+AGG | + | chr2_2:20812771-20812790 | Msa0243570:intron | 35.0% | |
| !!! | TCCTCGGTGTTTCTTTTTTT+AGG | - | chr2_2:20812775-20812794 | None:intergenic | 35.0% |
| CAGATATGGGGTACATATAT+TGG | - | chr2_2:20812849-20812868 | None:intergenic | 35.0% | |
| !!! | TATAGTTTTAGAGGATGTGC+TGG | + | chr2_2:20812910-20812929 | Msa0243570:intron | 35.0% |
| ATTGAGTACATCAAGTGTCA+TGG | - | chr2_2:20812936-20812955 | None:intergenic | 35.0% | |
| ! | ACTGTCATCTGTCAGAATTT+TGG | - | chr2_2:20813153-20813172 | None:intergenic | 35.0% |
| GAGAAAAAGAAAGTTACCAC+TGG | - | chr2_2:20813234-20813253 | None:intergenic | 35.0% | |
| CCTTCCTTTCAAAAGGATTT+AGG | - | chr2_2:20813256-20813275 | None:intergenic | 35.0% | |
| !! | CCTAAATCCTTTTGAAAGGA+AGG | + | chr2_2:20813253-20813272 | Msa0243570:intron | 35.0% |
| AACAGAACCTTCCTTTCAAA+AGG | - | chr2_2:20813263-20813282 | None:intergenic | 35.0% | |
| TACAGGACACAATATCCAAT+TGG | + | chr2_2:20813314-20813333 | Msa0243570:intron | 35.0% | |
| ACAGGACACAATATCCAATT+GGG | + | chr2_2:20813315-20813334 | Msa0243570:intron | 35.0% | |
| ATATTTCAGACATCCCCAAT+TGG | - | chr2_2:20813332-20813351 | None:intergenic | 35.0% | |
| TTGATGAGGGCCTATATTTA+GGG | - | chr2_2:20813398-20813417 | None:intergenic | 35.0% | |
| CAACTAAACTTCGAGCATTA+AGG | + | chr2_2:20813415-20813434 | Msa0243570:intron | 35.0% | |
| CAAAGAAGCAACTGCATATA+TGG | - | chr2_2:20813496-20813515 | None:intergenic | 35.0% | |
| TTGTCAGTCTTCAACATATC+TGG | + | chr2_2:20813698-20813717 | Msa0243570:CDS | 35.0% | |
| TAACATTGACCATACCGTTA+CGG | - | chr2_2:20813742-20813761 | None:intergenic | 35.0% | |
| ! | ACTGGAGATACTTTTGTTGA+TGG | + | chr2_2:20813849-20813868 | Msa0243570:CDS | 35.0% |
| !! | AGATACTTTTGTTGATGGAG+CGG | + | chr2_2:20813854-20813873 | Msa0243570:CDS | 35.0% |
| AAGCAAGACCAGAAATTGTT+AGG | + | chr2_2:20814011-20814030 | Msa0243570:CDS | 35.0% | |
| ATACCTGTATGTCACATTCA+CGG | - | chr2_2:20814374-20814393 | None:intergenic | 35.0% | |
| GGAAAAAGTTATCCTTGCAT+TGG | + | chr2_2:20814417-20814436 | Msa0243570:CDS | 35.0% | |
| AAGCTTCTTCTCAAAAACCC+AGG | + | chr2_2:20809434-20809453 | Msa0243570:CDS | 40.0% | |
| AAGTGAAGTGAAGTGAACCT+GGG | - | chr2_2:20809454-20809473 | None:intergenic | 40.0% | |
| ! | TCTTTAGGAGGCTGAAACAA+GGG | - | chr2_2:20809673-20809692 | None:intergenic | 40.0% |
| ! | ATCTTTAGGAGGCTGAAACA+AGG | - | chr2_2:20809674-20809693 | None:intergenic | 40.0% |
| ! | GCTGTTTCATCATCTTTAGG+AGG | - | chr2_2:20809685-20809704 | None:intergenic | 40.0% |
| AGATGATGAAACAGCTTCTG+AGG | + | chr2_2:20809690-20809709 | Msa0243570:CDS | 40.0% | |
| GTCTCATATGCACCCAAAAA+AGG | - | chr2_2:20809839-20809858 | None:intergenic | 40.0% | |
| CTTTATGCCCACCAACAAAA+AGG | - | chr2_2:20809861-20809880 | None:intergenic | 40.0% | |
| ! | TAGTAGTCTTACCCTTAAGC+CGG | + | chr2_2:20809890-20809909 | Msa0243570:intron | 40.0% |
| CACTGTCTCAATCAATCTGT+TGG | - | chr2_2:20810173-20810192 | None:intergenic | 40.0% | |
| CAACAGATTGATTGAGACAG+TGG | + | chr2_2:20810171-20810190 | Msa0243570:intron | 40.0% | |
| !! | GTGAGTGAATGTTGTTTCCA+AGG | + | chr2_2:20810195-20810214 | Msa0243570:intron | 40.0% |
| AACCTCTTTGACTGCAATTG+CGG | + | chr2_2:20810271-20810290 | Msa0243570:intron | 40.0% | |
| ATTCCTATAAAGCCGGACTT+TGG | + | chr2_2:20810615-20810634 | Msa0243570:intron | 40.0% | |
| !! | GATTTTAAGGAAGGGCCAAA+TGG | + | chr2_2:20810811-20810830 | Msa0243570:CDS | 40.0% |
| GCATACACACCAAAACCATT+TGG | - | chr2_2:20810829-20810848 | None:intergenic | 40.0% | |
| CAAATCCTATGTAAGACTGG+TGG | + | chr2_2:20810898-20810917 | Msa0243570:intron | 40.0% | |
| ! | TTTTCCCTAACGATGAACGT+GGG | + | chr2_2:20811042-20811061 | Msa0243570:intron | 40.0% |
| TTCCCTGATATAATTCCCCT+TGG | + | chr2_2:20811131-20811150 | Msa0243570:CDS | 40.0% | |
| GACCAAGGGGAATTATATCA+GGG | - | chr2_2:20811136-20811155 | None:intergenic | 40.0% | |
| TGACCAAGGGGAATTATATC+AGG | - | chr2_2:20811137-20811156 | None:intergenic | 40.0% | |
| AGGAGAATTGCAATTACCTC+TGG | - | chr2_2:20811191-20811210 | None:intergenic | 40.0% | |
| AATCTTTGTGGCAGACAGAT+TGG | + | chr2_2:20811364-20811383 | Msa0243570:intron | 40.0% | |
| ATCTTTGTGGCAGACAGATT+GGG | + | chr2_2:20811365-20811384 | Msa0243570:intron | 40.0% | |
| CTAGTACTTTCATCTGCACT+GGG | - | chr2_2:20811468-20811487 | None:intergenic | 40.0% | |
| ! | TAGCTTACTTCTAGCTACAG+AGG | + | chr2_2:20811485-20811504 | Msa0243570:CDS | 40.0% |
| CTCATTGTAGAAGCAAGATC+GGG | - | chr2_2:20811710-20811729 | None:intergenic | 40.0% | |
| ! | TAGAATTCTGGGAGAAGAAC+TGG | + | chr2_2:20811750-20811769 | Msa0243570:CDS | 40.0% |
| ! | AGAATTCTGGGAGAAGAACT+GGG | + | chr2_2:20811751-20811770 | Msa0243570:CDS | 40.0% |
| ! | GCAAGACGTTTTACTTTGAG+CGG | - | chr2_2:20811882-20811901 | None:intergenic | 40.0% |
| TGATCCTCAAAGGTTCATGT+GGG | + | chr2_2:20811905-20811924 | Msa0243570:CDS | 40.0% | |
| GAACAAAGCTTACCAGCATA+AGG | - | chr2_2:20812011-20812030 | None:intergenic | 40.0% | |
| TGCATGGGTTCGAAAATGAT+AGG | - | chr2_2:20812058-20812077 | None:intergenic | 40.0% | |
| ! | CAAGTACTGCTACAATGCAT+GGG | - | chr2_2:20812073-20812092 | None:intergenic | 40.0% |
| ! | ACAAGTACTGCTACAATGCA+TGG | - | chr2_2:20812074-20812093 | None:intergenic | 40.0% |
| !!! | TCCATTGGCGTTTTAAAGAC+AGG | + | chr2_2:20812215-20812234 | Msa0243570:CDS | 40.0% |
| !! | TCCTGTCTTTAAAACGCCAA+TGG | - | chr2_2:20812219-20812238 | None:intergenic | 40.0% |
| CGTTCGGGTCATAGTTTAAT+TGG | + | chr2_2:20812654-20812673 | Msa0243570:intron | 40.0% | |
| GTGCAGATATTGGGTTAAAG+TGG | - | chr2_2:20812808-20812827 | None:intergenic | 40.0% | |
| TATGGGGTACATATATTGGC+AGG | - | chr2_2:20812845-20812864 | None:intergenic | 40.0% | |
| !! | CAAAGGCACCTGCAATTATT+TGG | - | chr2_2:20812873-20812892 | None:intergenic | 40.0% |
| ! | ATACGGATTTTCATCTCCAG+TGG | + | chr2_2:20813215-20813234 | Msa0243570:CDS | 40.0% |
| CAAAGAAAAACTGGGCTGAT+AGG | + | chr2_2:20813290-20813309 | Msa0243570:intron | 40.0% | |
| CAGGACACAATATCCAATTG+GGG | + | chr2_2:20813316-20813335 | Msa0243570:intron | 40.0% | |
| ! | GTTGATGAGGGCCTATATTT+AGG | - | chr2_2:20813399-20813418 | None:intergenic | 40.0% |
| !! | GCTCGAAGTTTAGTTGATGA+GGG | - | chr2_2:20813411-20813430 | None:intergenic | 40.0% |
| ! | TGCTCGAAGTTTAGTTGATG+AGG | - | chr2_2:20813412-20813431 | None:intergenic | 40.0% |
| GAGAATTTGATCACATCCCA+AGG | - | chr2_2:20813647-20813666 | None:intergenic | 40.0% | |
| TGGGATGTGATCAAATTCTC+AGG | + | chr2_2:20813647-20813666 | Msa0243570:CDS | 40.0% | |
| CTGACAAGAAAGAATCCAGA+TGG | - | chr2_2:20813685-20813704 | None:intergenic | 40.0% | |
| TACGGTAATACTCTTCAGGA+AGG | - | chr2_2:20813724-20813743 | None:intergenic | 40.0% | |
| !! | CCTGAAGAGTATTACCGTAA+CGG | + | chr2_2:20813725-20813744 | Msa0243570:CDS | 40.0% |
| ! | AGAGTATTACCGTAACGGTA+TGG | + | chr2_2:20813730-20813749 | Msa0243570:intron | 40.0% |
| TTCCTTTCTTCACTTGGGAT+TGG | - | chr2_2:20813930-20813949 | None:intergenic | 40.0% | |
| AATCCCAAGTGAAGAAAGGA+AGG | + | chr2_2:20813929-20813948 | Msa0243570:CDS | 40.0% | |
| !! | CAATTTCTGGTCTTGCTTAG+AGG | - | chr2_2:20814009-20814028 | None:intergenic | 40.0% |
| CTTGATAGATCTCCAATGCA+AGG | - | chr2_2:20814432-20814451 | None:intergenic | 40.0% | |
| GTGAACTGAAGAGTGGAAAC+TGG | - | chr2_2:20809382-20809401 | None:intergenic | 45.0% | |
| CCATTGAGTGAACTGAAGAG+TGG | - | chr2_2:20809389-20809408 | None:intergenic | 45.0% | |
| CCACTCTTCAGTTCACTCAA+TGG | + | chr2_2:20809386-20809405 | Msa0243570:CDS | 45.0% | |
| GAAGTGAAGTGAAGTGAACC+TGG | - | chr2_2:20809455-20809474 | None:intergenic | 45.0% | |
| GTTTGGGCCATGGTTATTTG+TGG | + | chr2_2:20809569-20809588 | Msa0243570:CDS | 45.0% | |
| AGGCTGAAACAAGGGAAATG+GGG | - | chr2_2:20809665-20809684 | None:intergenic | 45.0% | |
| GAGGCTGAAACAAGGGAAAT+GGG | - | chr2_2:20809666-20809685 | None:intergenic | 45.0% | |
| !! | GTTTTAACACATTCCAGGGC+CGG | - | chr2_2:20809912-20809931 | None:intergenic | 45.0% |
| !! | GAGCAAAAGAAGAGCACCTA+CGG | - | chr2_2:20810112-20810131 | None:intergenic | 45.0% |
| ! | CATCCAAAGTCCGGCTTTAT+AGG | - | chr2_2:20810621-20810640 | None:intergenic | 45.0% |
| CTCCATAAGCTCGCATACTT+CGG | - | chr2_2:20810789-20810808 | None:intergenic | 45.0% | |
| ! | AAGGAAGGGCCAAATGGTTT+TGG | + | chr2_2:20810817-20810836 | Msa0243570:CDS | 45.0% |
| ATCGTTAGGGAAAACAGCCA+TGG | - | chr2_2:20811036-20811055 | None:intergenic | 45.0% | |
| ! | GTTTTCCCTAACGATGAACG+TGG | + | chr2_2:20811041-20811060 | Msa0243570:intron | 45.0% |
| TGAACGTGGGCAGGTAATAA+TGG | + | chr2_2:20811055-20811074 | Msa0243570:intron | 45.0% | |
| GCTAGTACTTTCATCTGCAC+TGG | - | chr2_2:20811469-20811488 | None:intergenic | 45.0% | |
| GTGATCCTCAAAGGTTCATG+TGG | + | chr2_2:20811904-20811923 | Msa0243570:CDS | 45.0% | |
| TGCTGGACAACGGATAAGAA+AGG | + | chr2_2:20812258-20812277 | Msa0243570:CDS | 45.0% | |
| GCTGGACAACGGATAAGAAA+GGG | + | chr2_2:20812259-20812278 | Msa0243570:CDS | 45.0% | |
| ACGGATAAGAAAGGGAGATG+AGG | + | chr2_2:20812267-20812286 | Msa0243570:CDS | 45.0% | |
| TCATTACCACAGATACACCG+AGG | - | chr2_2:20812593-20812612 | None:intergenic | 45.0% | |
| TAGGAAGATTGTGTGCTTGG+CGG | - | chr2_2:20812756-20812775 | None:intergenic | 45.0% | |
| AAGTGGTAAGCTTGTGTCCT+CGG | - | chr2_2:20812791-20812810 | None:intergenic | 45.0% | |
| AAACTGGGCTGATAGGATAC+AGG | + | chr2_2:20813297-20813316 | Msa0243570:intron | 45.0% | |
| CCGTTACGGTAATACTCTTC+AGG | - | chr2_2:20813728-20813747 | None:intergenic | 45.0% | |
| ACATTGCCAACATGGTCAGA+TGG | + | chr2_2:20813894-20813913 | Msa0243570:CDS | 45.0% | |
| ACATCTCCATCTGACCATGT+TGG | - | chr2_2:20813903-20813922 | None:intergenic | 45.0% | |
| CTTTCTTCACTTGGGATTGG+AGG | - | chr2_2:20813927-20813946 | None:intergenic | 45.0% | |
| CTCCAATCCCAAGTGAAGAA+AGG | + | chr2_2:20813925-20813944 | Msa0243570:CDS | 45.0% | |
| CAGCCTTCCTTTCTTCACTT+GGG | - | chr2_2:20813935-20813954 | None:intergenic | 45.0% | |
| !! | TTTCTGGTCTTGCTTAGAGG+TGG | - | chr2_2:20814006-20814025 | None:intergenic | 45.0% |
| CTTCCGTGAATGTGACATAC+AGG | + | chr2_2:20814368-20814387 | Msa0243570:intron | 45.0% | |
| CAGTTCAAAGGTTTGGGCCA+TGG | + | chr2_2:20809559-20809578 | Msa0243570:intron | 50.0% | |
| TGGGTCGCCACAAATAACCA+TGG | - | chr2_2:20809579-20809598 | None:intergenic | 50.0% | |
| GGAGGCTGAAACAAGGGAAA+TGG | - | chr2_2:20809667-20809686 | None:intergenic | 50.0% | |
| CTATGTCTCCGATAGCAGAG+CGG | + | chr2_2:20810015-20810034 | Msa0243570:intron | 50.0% | |
| TGTCCATGTCGTGTCAGTGT+CGG | + | chr2_2:20810404-20810423 | Msa0243570:intron | 50.0% | |
| GTCCGAAGTATGCGAGCTTA+TGG | + | chr2_2:20810784-20810803 | Msa0243570:CDS | 50.0% | |
| TGTATGAGGCTACTCACCCT+TGG | - | chr2_2:20810880-20810899 | None:intergenic | 50.0% | |
| CACTGCCACCAGTCTTACAT+AGG | - | chr2_2:20810906-20810925 | None:intergenic | 50.0% | |
| GTCTTGCTCGTGATCCTCAA+AGG | + | chr2_2:20811895-20811914 | Msa0243570:CDS | 50.0% | |
| ACTGCCCACATGAACCTTTG+AGG | - | chr2_2:20811912-20811931 | None:intergenic | 50.0% | |
| CAAAGGTTCATGTGGGCAGT+AGG | + | chr2_2:20811912-20811931 | Msa0243570:CDS | 50.0% | |
| ! | TCACATCCTCGGTGTATCTG+TGG | + | chr2_2:20812584-20812603 | Msa0243570:intron | 50.0% |
| ! | AACCGGACTAGAGATGGAAC+TGG | + | chr2_2:20812626-20812645 | Msa0243570:intron | 50.0% |
| AGCCAGTTCCATCTCTAGTC+CGG | - | chr2_2:20812631-20812650 | None:intergenic | 50.0% | |
| GATGGAACTGGCTAGACGTT+CGG | + | chr2_2:20812638-20812657 | Msa0243570:intron | 50.0% | |
| ATGGAACTGGCTAGACGTTC+GGG | + | chr2_2:20812639-20812658 | Msa0243570:intron | 50.0% | |
| TGGTTCAACCACAGTTGAGC+TGG | + | chr2_2:20812674-20812693 | Msa0243570:intron | 50.0% | |
| AGGCAATGCACGAATCCATC+TGG | + | chr2_2:20813667-20813686 | Msa0243570:CDS | 50.0% | |
| GCAGAAGTTCTATCGAGCAC+TGG | + | chr2_2:20813831-20813850 | Msa0243570:intron | 50.0% | |
| CAGCACGAACATTGCCAACA+TGG | + | chr2_2:20813886-20813905 | Msa0243570:CDS | 50.0% | |
| GCAGCCTTCCTTTCTTCACT+TGG | - | chr2_2:20813936-20813955 | None:intergenic | 50.0% | |
| TGAAGAAAGGAAGGCTGCGA+AGG | + | chr2_2:20813938-20813957 | Msa0243570:CDS | 50.0% | |
| TCAAGCGTTCTCGTAGACTC+TGG | - | chr2_2:20814244-20814263 | None:intergenic | 50.0% | |
| TGGCGACCCACTTACTCGTT+TGG | + | chr2_2:20809589-20809608 | Msa0243570:CDS | 55.0% | |
| ! | ACATTCCAGGGCCGGCTTAA+GGG | - | chr2_2:20809904-20809923 | None:intergenic | 55.0% |
| CGCTCTGCTATCGGAGACAT+AGG | - | chr2_2:20810017-20810036 | None:intergenic | 55.0% | |
| GGCCGCAATTGCAGTCAAAG+AGG | - | chr2_2:20810276-20810295 | None:intergenic | 55.0% | |
| TGTCCGACACTGACACGACA+TGG | - | chr2_2:20810410-20810429 | None:intergenic | 55.0% | |
| GATCTACAGGCACCAACTGG+AGG | - | chr2_2:20810741-20810760 | None:intergenic | 55.0% | |
| CAGGATCTACAGGCACCAAC+TGG | - | chr2_2:20810744-20810763 | None:intergenic | 55.0% | |
| TTGAACCTCTTCGCCGACCA+AGG | + | chr2_2:20810860-20810879 | Msa0243570:CDS | 55.0% | |
| TGAACCTCTTCGCCGACCAA+GGG | + | chr2_2:20810861-20810880 | Msa0243570:CDS | 55.0% | |
| TGAGGCTACTCACCCTTGGT+CGG | - | chr2_2:20810876-20810895 | None:intergenic | 55.0% | |
| CCTGCCCACGTTCATCGTTA+GGG | - | chr2_2:20811049-20811068 | None:intergenic | 55.0% | |
| ACCTGCCCACGTTCATCGTT+AGG | - | chr2_2:20811050-20811069 | None:intergenic | 55.0% | |
| !!! | GGAGGAACTTTTGGAGCTGC+AGG | + | chr2_2:20811682-20811701 | Msa0243570:intron | 55.0% |
| TCTTACCCTTAAGCCGGCCC+TGG | + | chr2_2:20809896-20809915 | Msa0243570:intron | 60.0% | |
| ! | CACATTCCAGGGCCGGCTTA+AGG | - | chr2_2:20809905-20809924 | None:intergenic | 60.0% |
| AACCGCAGCCGCTCTGCTAT+CGG | - | chr2_2:20810026-20810045 | None:intergenic | 60.0% | |
| CCCTAACGATGAACGTGGGC+AGG | + | chr2_2:20811046-20811065 | Msa0243570:intron | 60.0% | |
| CTCCGATAGCAGAGCGGCTG+CGG | + | chr2_2:20810021-20810040 | Msa0243570:intron | 65.0% | |
| CTCACCCTTGGTCGGCGAAG+AGG | - | chr2_2:20810868-20810887 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 20809357 | 20814594 | 20809357 | ID=Msa0243570;Name=Msa0243570 |
| chr2_2 | mRNA | 20809357 | 20814594 | 20809357 | ID=Msa0243570-mRNA-1;Parent=Msa0243570;Name=Msa0243570-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|1|0.92|1|0.84|0.78|14|87|496 |
| chr2_2 | exon | 20809357 | 20809455 | 20809357 | ID=Msa0243570-mRNA-1:exon:8297;Parent=Msa0243570-mRNA-1 |
| chr2_2 | exon | 20809562 | 20809711 | 20809562 | ID=Msa0243570-mRNA-1:exon:8298;Parent=Msa0243570-mRNA-1 |
| chr2_2 | exon | 20810745 | 20810882 | 20810745 | ID=Msa0243570-mRNA-1:exon:8299;Parent=Msa0243570-mRNA-1 |
| chr2_2 | exon | 20811068 | 20811193 | 20811068 | ID=Msa0243570-mRNA-1:exon:8300;Parent=Msa0243570-mRNA-1 |
| chr2_2 | exon | 20811378 | 20811506 | 20811378 | ID=Msa0243570-mRNA-1:exon:8301;Parent=Msa0243570-mRNA-1 |
| chr2_2 | exon | 20811683 | 20811772 | 20811683 | ID=Msa0243570-mRNA-1:exon:8302;Parent=Msa0243570-mRNA-1 |
| chr2_2 | exon | 20811867 | 20812017 | 20811867 | ID=Msa0243570-mRNA-1:exon:8303;Parent=Msa0243570-mRNA-1 |
| chr2_2 | exon | 20812179 | 20812288 | 20812179 | ID=Msa0243570-mRNA-1:exon:8304;Parent=Msa0243570-mRNA-1 |
| chr2_2 | exon | 20813165 | 20813236 | 20813165 | ID=Msa0243570-mRNA-1:exon:8305;Parent=Msa0243570-mRNA-1 |
| chr2_2 | exon | 20813641 | 20813746 | 20813641 | ID=Msa0243570-mRNA-1:exon:8306;Parent=Msa0243570-mRNA-1 |
| chr2_2 | exon | 20813835 | 20814032 | 20813835 | ID=Msa0243570-mRNA-1:exon:8307;Parent=Msa0243570-mRNA-1 |
| chr2_2 | exon | 20814233 | 20814275 | 20814233 | ID=Msa0243570-mRNA-1:exon:8308;Parent=Msa0243570-mRNA-1 |
| chr2_2 | exon | 20814390 | 20814516 | 20814390 | ID=Msa0243570-mRNA-1:exon:8309;Parent=Msa0243570-mRNA-1 |
| chr2_2 | exon | 20814556 | 20814594 | 20814556 | ID=Msa0243570-mRNA-1:exon:8310;Parent=Msa0243570-mRNA-1 |
| chr2_2 | CDS | 20809357 | 20809455 | 20809357 | ID=Msa0243570-mRNA-1:cds;Parent=Msa0243570-mRNA-1 |
| chr2_2 | CDS | 20809562 | 20809711 | 20809562 | ID=Msa0243570-mRNA-1:cds;Parent=Msa0243570-mRNA-1 |
| chr2_2 | CDS | 20810745 | 20810882 | 20810745 | ID=Msa0243570-mRNA-1:cds;Parent=Msa0243570-mRNA-1 |
| chr2_2 | CDS | 20811068 | 20811193 | 20811068 | ID=Msa0243570-mRNA-1:cds;Parent=Msa0243570-mRNA-1 |
| chr2_2 | CDS | 20811378 | 20811506 | 20811378 | ID=Msa0243570-mRNA-1:cds;Parent=Msa0243570-mRNA-1 |
| chr2_2 | CDS | 20811683 | 20811772 | 20811683 | ID=Msa0243570-mRNA-1:cds;Parent=Msa0243570-mRNA-1 |
| chr2_2 | CDS | 20811867 | 20812017 | 20811867 | ID=Msa0243570-mRNA-1:cds;Parent=Msa0243570-mRNA-1 |
| chr2_2 | CDS | 20812179 | 20812288 | 20812179 | ID=Msa0243570-mRNA-1:cds;Parent=Msa0243570-mRNA-1 |
| chr2_2 | CDS | 20813165 | 20813236 | 20813165 | ID=Msa0243570-mRNA-1:cds;Parent=Msa0243570-mRNA-1 |
| chr2_2 | CDS | 20813641 | 20813746 | 20813641 | ID=Msa0243570-mRNA-1:cds;Parent=Msa0243570-mRNA-1 |
| chr2_2 | CDS | 20813835 | 20814032 | 20813835 | ID=Msa0243570-mRNA-1:cds;Parent=Msa0243570-mRNA-1 |
| chr2_2 | CDS | 20814233 | 20814275 | 20814233 | ID=Msa0243570-mRNA-1:cds;Parent=Msa0243570-mRNA-1 |
| chr2_2 | CDS | 20814390 | 20814468 | 20814390 | ID=Msa0243570-mRNA-1:cds;Parent=Msa0243570-mRNA-1 |
| chr2_2 | three_prime_UTR | 20814469 | 20814516 | 20814469 | ID=Msa0243570-mRNA-1:three_prime_utr;Parent=Msa0243570-mRNA-1 |
| chr2_2 | three_prime_UTR | 20814556 | 20814594 | 20814556 | ID=Msa0243570-mRNA-1:three_prime_utr;Parent=Msa0243570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
