AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0824140


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0824140 MtrunA17_Chr5g0444861 93.704 540 25 2 1 534 24 560 0.0 984
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0824140 AT5G55220.1 58.877 552 205 6 1 535 1 547 0.0 655

Find 110 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTTCCTTGATTCTATAAT+TGG 0.141614 5_3:+63270875 Msa0824140:CDS
TCAGAAATCCATTTAATTTC+TGG 0.168583 5_3:-63270189 None:intergenic
CACATTGCTTATTTCCCTTT+TGG 0.177272 5_3:-63273315 None:intergenic
CCGAAAGAAAACTCTTTAAA+TGG 0.194150 5_3:-63272989 None:intergenic
CCGTCTTCCTGCTGAATTAA+AGG 0.205745 5_3:+63268236 Msa0824140:CDS
ATGTTGCACCAGAAATTAAA+TGG 0.259733 5_3:+63270181 Msa0824140:CDS
ATTATTCTCTCGGATATCTT+AGG 0.278137 5_3:+63269936 Msa0824140:CDS
GAGGTTGAAGGAGTTGAATT+TGG 0.284849 5_3:-63268103 None:intergenic
TCAATACCTGCATTTCTAAT+AGG 0.299634 5_3:-63271809 None:intergenic
GGTTACTGGAAGGGCTTTGC+AGG 0.317659 5_3:+63269868 Msa0824140:intron
CTGCAAATGGAACTCTTTGC+AGG 0.319833 5_3:-63273161 None:intergenic
AAGCACCGGCCAAACAAATT+AGG 0.327773 5_3:+63272949 Msa0824140:three_prime_UTR
CTTGATTCTATAATTGGAAT+TGG 0.335719 5_3:+63270881 Msa0824140:CDS
AAGATATCCGAGAGAATAAT+AGG 0.339434 5_3:-63269933 None:intergenic
TCTCACTTTCCTAATTTGTT+TGG 0.341930 5_3:-63272958 None:intergenic
TATATTAGATCAGATTTCTA+AGG 0.345020 5_3:+63271481 Msa0824140:CDS
AAACAGAGTTACTCACTCTT+TGG 0.347338 5_3:-63267964 None:intergenic
TAGCTGTTTGCTCTATCTCT+TGG 0.360719 5_3:-63271436 None:intergenic
AGTAGCACATACTCTGGAAT+TGG 0.362998 5_3:-63268277 None:intergenic
TTCGATGCATACATAGTTGT+TGG 0.364385 5_3:-63273240 None:intergenic
AGTATTCTTGTTGGTTATGT+GGG 0.365092 5_3:+63269297 Msa0824140:CDS
AGATATTCATTCACGGACTT+TGG 0.385184 5_3:-63272006 None:intergenic
TGGCAGTTGGTGACATATAT+AGG 0.388142 5_3:+63272073 Msa0824140:CDS
TAACCAACAAGAATACTTTC+CGG 0.396552 5_3:-63269291 None:intergenic
CTGTTTGATTGCTGCTGCCA+TGG 0.402955 5_3:+63267981 Msa0824140:exon
GAACAAGGTAGACAGCTATA+TGG 0.427214 5_3:+63271780 Msa0824140:CDS
AACCAACAAGAATACTTTCC+GGG 0.427325 5_3:-63269290 None:intergenic
TGGATGTACCACAGTGCAAC+AGG 0.439789 5_3:+63271297 Msa0824140:CDS
AAGTATTCTTGTTGGTTATG+TGG 0.444352 5_3:+63269296 Msa0824140:CDS
GTCCCGGAAAGTATTCTTGT+TGG 0.452137 5_3:+63269288 Msa0824140:CDS
CGAACTTTGTAAACTCAACT+AGG 0.456526 5_3:-63268918 None:intergenic
TTACAGAGATTTACCAGAGC+TGG 0.456759 5_3:+63271246 Msa0824140:CDS
ATGTCAATGTCAATCCCAAA+AGG 0.459984 5_3:+63273300 Msa0824140:three_prime_UTR
AACTTCTTTCTAGCATGGAA+TGG 0.465422 5_3:-63273188 None:intergenic
GAAGAAGGAAGAGAGAAAGA+AGG 0.469342 5_3:-63268048 None:intergenic
TCAGTGACCTTTAATTCAGC+AGG 0.471611 5_3:-63268243 None:intergenic
ATTAAAGGTCACTGAAACAA+AGG 0.471679 5_3:+63268251 Msa0824140:CDS
TGTTGCACTGTGGTACATCC+AGG 0.475737 5_3:-63271295 None:intergenic
CGAGGAACGTGTAAAGGAAC+AGG 0.479197 5_3:+63272420 Msa0824140:CDS
ACTTCTTTCTAGCATGGAAT+GGG 0.479457 5_3:-63273187 None:intergenic
TGAATATCTTGAGCATCATA+AGG 0.481148 5_3:+63272020 Msa0824140:CDS
AAGAAGGAAGAGAGAAAGAA+GGG 0.486758 5_3:-63268047 None:intergenic
ACTTTCCTAATTTGTTTGGC+CGG 0.487830 5_3:-63272954 None:intergenic
GCGTATAACGAGAAATATAT+CGG 0.491183 5_3:-63273268 None:intergenic
TACCTGCATTTCTAATAGGC+TGG 0.492031 5_3:-63271805 None:intergenic
GAAAGAAGATGAGAGGTTGA+AGG 0.492372 5_3:-63268115 None:intergenic
AAAACTAACTGAAGAGCAGC+TGG 0.495940 5_3:+63271969 Msa0824140:CDS
ATCCAGCCTATTAGAAATGC+AGG 0.500445 5_3:+63271803 Msa0824140:CDS
ATAGTTGTTGGAAAGATTTG+AGG 0.501400 5_3:-63273228 None:intergenic
ACTGAAGAAGAAGGAGATGA+AGG 0.501906 5_3:-63268192 None:intergenic
ATACGACGAGGAACGTGTAA+AGG 0.502907 5_3:+63272414 Msa0824140:CDS
AGAGAATTTGAAGAAGAAGA+AGG 0.510181 5_3:-63268063 None:intergenic
AATAAGCAATGTGATATTCA+AGG 0.519149 5_3:+63273325 Msa0824140:three_prime_UTR
ATTCCTTCTGCTGAAAGTAA+AGG 0.519175 5_3:+63270705 Msa0824140:CDS
GCATGTGGAGGTACCGTCAC+TGG 0.519412 5_3:+63268870 Msa0824140:CDS
GAGGATACCTATTATTCTCT+CGG 0.520497 5_3:+63269926 Msa0824140:CDS
TGTTACTGACAGAGGACTAC+AGG 0.522402 5_3:+63270326 Msa0824140:CDS
AAGGAGCTAAGGTGCTAGAA+TGG 0.522425 5_3:+63272882 Msa0824140:CDS
ATGGAATGGGTGGCTGCAAA+TGG 0.523253 5_3:-63273174 None:intergenic
GCAATAGAATCATCCAGCTC+TGG 0.523626 5_3:-63271259 None:intergenic
CTACCTTTACTTTCAGCAGA+AGG 0.525053 5_3:-63270708 None:intergenic
TCTATAATTGGAATTGGTCG+AGG 0.525412 5_3:+63270887 Msa0824140:CDS
TCTGTAACTTCTTTCTAGCA+TGG 0.526461 5_3:-63273193 None:intergenic
AGAAGGCGTTACAAGTCAGC+TGG 0.527767 5_3:+63270291 Msa0824140:CDS
AAAAGTTCAACTGAAGAAGA+AGG 0.527774 5_3:-63268201 None:intergenic
AAGAGATAGAGCAAACAGCT+AGG 0.529180 5_3:+63271438 Msa0824140:CDS
CAATTCCAATTATAGAATCA+AGG 0.531449 5_3:-63270880 None:intergenic
GATATTTGATTCTTGATCAA+CGG 0.532623 5_3:-63270676 None:intergenic
TATATATGTCACCAACTGCC+AGG 0.537928 5_3:-63272071 None:intergenic
CAGGTACCTGGATTTCGTCC+TGG 0.538561 5_3:+63269258 Msa0824140:intron
ATTGCTGATAAACTTATCCC+TGG 0.539379 5_3:+63271277 Msa0824140:CDS
TGTTCATCAAACAAGGATTG+AGG 0.541311 5_3:-63271762 None:intergenic
ATGCTCAAGATATTCATTCA+CGG 0.543020 5_3:-63272013 None:intergenic
AAGGTTCAAGAAATACTAGA+AGG 0.544740 5_3:+63272863 Msa0824140:intron
CAATCCTTGTTTGATGAACA+AGG 0.549416 5_3:+63271765 Msa0824140:CDS
TGTCAATGTCAATCCCAAAA+GGG 0.553031 5_3:+63273301 Msa0824140:three_prime_UTR
ATCAAACAGAACCTGGCAGT+TGG 0.559239 5_3:+63272060 Msa0824140:CDS
AGAAATACTAGAAGGAGCTA+AGG 0.563256 5_3:+63272871 Msa0824140:CDS
TTGACGTTTGAATTCAGCAA+TGG 0.576175 5_3:-63272383 None:intergenic
ATATAGGCGTGAAAATATGC+AGG 0.579562 5_3:+63272089 Msa0824140:CDS
TCTTTCTAGCATGGAATGGG+TGG 0.582674 5_3:-63273184 None:intergenic
CCTTTAATTCAGCAGGAAGA+CGG 0.583442 5_3:-63268236 None:intergenic
AAATTTGATCAAACAGAACC+TGG 0.587535 5_3:+63272053 Msa0824140:CDS
CCTTCAGGTTAGATTGCATG+TGG 0.587910 5_3:+63268855 Msa0824140:intron
GTATTCTTGTTGGTTATGTG+GGG 0.588330 5_3:+63269298 Msa0824140:CDS
CTACGATCGAATCAATATTG+AGG 0.589271 5_3:+63269340 Msa0824140:CDS
AGAGATAGAGCAAACAGCTA+GGG 0.589916 5_3:+63271439 Msa0824140:CDS
TCTACCTTGTTCATCAAACA+AGG 0.591447 5_3:-63271769 None:intergenic
ATGCGAGGACTGTTACGAAA+GGG 0.596481 5_3:+63268894 Msa0824140:CDS
AGGAGAAGCTGAAACAGTGA+AGG 0.597465 5_3:-63268172 None:intergenic
ATTATAGAATCAAGGAAACC+TGG 0.599565 5_3:-63270872 None:intergenic
TGAGTTTACAAAGTTCGCCA+AGG 0.601858 5_3:+63268924 Msa0824140:CDS
TCTTTGATGATGTCTTCAGT+AGG 0.610103 5_3:-63272349 None:intergenic
TAAACTGAGCATGAACACCT+TGG 0.610469 5_3:-63270964 None:intergenic
TACTGAAGACATCATCAAAG+AGG 0.612818 5_3:+63272351 Msa0824140:CDS
GATGGTGAAATATTAGTACC+AGG 0.615164 5_3:+63270854 Msa0824140:CDS
ACTTTCACACGCTGTAACAG+CGG 0.616868 5_3:+63269368 Msa0824140:CDS
CTGAAAGTTGTTACTGACAG+AGG 0.619184 5_3:+63270318 Msa0824140:CDS
CAGTCCTCGCATACCAGTGA+CGG 0.639082 5_3:-63268883 None:intergenic
GGAGAAGCTGAAACAGTGAA+GGG 0.639539 5_3:-63268171 None:intergenic
ACAAAATGAGAGACAAGCAC+CGG 0.645226 5_3:+63272935 Msa0824140:exon
TATGCGAGGACTGTTACGAA+AGG 0.650131 5_3:+63268893 Msa0824140:CDS
GTTGCACTGTGGTACATCCA+GGG 0.654086 5_3:-63271294 None:intergenic
TCAGGTTAGATTGCATGTGG+AGG 0.655245 5_3:+63268858 Msa0824140:intron
CGATCGAATCAATATTGAGG+AGG 0.656634 5_3:+63269343 Msa0824140:CDS
GTTGAATGAAAGAAGATGAG+AGG 0.657369 5_3:-63268122 None:intergenic
TGGAAGCAGGAAAATCTCCA+AGG 0.665686 5_3:+63270947 Msa0824140:CDS
GGTACCGTCACTGGTATGCG+AGG 0.674754 5_3:+63268879 Msa0824140:CDS
AGTTCGAGTACAGAGCTCCA+TGG 0.675973 5_3:-63267998 None:intergenic
AAAAGTCACCTGTTGCACTG+TGG 0.753690 5_3:-63271305 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATAATCAATTTTGTTTTAT+AGG + chr5_3:63269847-63269866 Msa0824140:intron 10.0%
!! TTTATTTATTTGTTCTTATT+TGG + chr5_3:63271919-63271938 Msa0824140:intron 10.0%
!!! GTACATAATATTTTTTATTT+CGG - chr5_3:63272530-63272549 None:intergenic 10.0%
!! AAAATACATATAAAAGGAAA+TGG - chr5_3:63270570-63270589 None:intergenic 15.0%
!!! TTTTTTTTTCTTTCTTTTTC+TGG + chr5_3:63271650-63271669 Msa0824140:intron 15.0%
!! AGTCTATTTAGTAAATTATT+TGG + chr5_3:63272285-63272304 Msa0824140:intron 15.0%
!!! TTCTAAATAATGGAATATAA+AGG + chr5_3:63272640-63272659 Msa0824140:intron 15.0%
!! TATCAATCAATCTTTAAATT+AGG - chr5_3:63272822-63272841 None:intergenic 15.0%
!!! TTTAAGTTTTCAAAGTAATC+TGG + chr5_3:63268648-63268667 Msa0824140:intron 20.0%
!!! TTTTCTGAATGAATTTTGTT+TGG - chr5_3:63269014-63269033 None:intergenic 20.0%
!! ATGATTTCTGATATCTAAAT+TGG + chr5_3:63269068-63269087 Msa0824140:intron 20.0%
!! TAGTAAACTTGTATATGATA+TGG - chr5_3:63269162-63269181 None:intergenic 20.0%
!!! ACTTTTTTCAGTAATAACTT+TGG - chr5_3:63269782-63269801 None:intergenic 20.0%
!! AAAGTTATTACTGAAAAAAG+TGG + chr5_3:63269781-63269800 Msa0824140:intron 20.0%
!!! AATTTTGTTTTATAGGTTAC+TGG + chr5_3:63269854-63269873 Msa0824140:intron 20.0%
!!! AGTTACTAAATTTTCTGATA+TGG + chr5_3:63269904-63269923 Msa0824140:CDS 20.0%
!! TTTATGAGTATAGATAACTT+TGG - chr5_3:63270036-63270055 None:intergenic 20.0%
!! ATACTCATAAAATAGAGAAA+AGG + chr5_3:63270045-63270064 Msa0824140:intron 20.0%
!!! TTTCTTTTCCATTTTTAATG+TGG + chr5_3:63270391-63270410 Msa0824140:intron 20.0%
!! TTAAGAAACCACATTAAAAA+TGG - chr5_3:63270402-63270421 None:intergenic 20.0%
!! TATATTAGATCAGATTTCTA+AGG + chr5_3:63271481-63271500 Msa0824140:CDS 20.0%
!!! TTTTTTCTTCCTTTAAATGT+TGG - chr5_3:63271877-63271896 None:intergenic 20.0%
!!! ATTATGTACCGTTTTTAAAA+TGG + chr5_3:63272541-63272560 Msa0824140:intron 20.0%
!! AAAAAAAATACTATGCAAGT+AGG - chr5_3:63272588-63272607 None:intergenic 20.0%
!! GAGATGTATATTCTAAATAA+TGG + chr5_3:63272630-63272649 Msa0824140:intron 20.0%
!!! ATTGTTCTTAGTTTGTATTT+GGG - chr5_3:63272675-63272694 None:intergenic 20.0%
!!! TATTTTCTTACAACTTACAT+TGG - chr5_3:63273015-63273034 None:intergenic 20.0%
!!! ATTGATAAAGAATCTTTTTG+AGG - chr5_3:63273398-63273417 None:intergenic 20.0%
! GTAAAATAGTGAAGTGTAAT+TGG + chr5_3:63268365-63268384 Msa0824140:intron 25.0%
!! ACTAAACAATTTTTGTCATC+AGG - chr5_3:63268600-63268619 None:intergenic 25.0%
! GAAAACTTAAACTCTAAATC+AGG - chr5_3:63268639-63268658 None:intergenic 25.0%
! AACAATTATACCATACACTA+TGG - chr5_3:63268723-63268742 None:intergenic 25.0%
! ATATATTTATGCTATCCTTC+AGG + chr5_3:63268840-63268859 Msa0824140:intron 25.0%
! AGCATAAATCAATAATACCT+TGG - chr5_3:63268944-63268963 None:intergenic 25.0%
! ATTTCTGATATCTAAATTGG+AGG + chr5_3:63269071-63269090 Msa0824140:intron 25.0%
!! TTGTAAAATTCAGTTTTGCA+TGG - chr5_3:63269120-63269139 None:intergenic 25.0%
! AACTTGTATATGATATGGTA+GGG - chr5_3:63269157-63269176 None:intergenic 25.0%
! AAACTTGTATATGATATGGT+AGG - chr5_3:63269158-63269177 None:intergenic 25.0%
!! TAACAATGTTTTACTTCAAC+AGG + chr5_3:63269239-63269258 Msa0824140:intron 25.0%
!!! TTAGCTTTTTAGACAATGTT+GGG + chr5_3:63269450-63269469 Msa0824140:intron 25.0%
! AGTAATATGATGAATATGAC+TGG - chr5_3:63269544-63269563 None:intergenic 25.0%
!!! TACTGAAAAAAGTGGATTAT+TGG + chr5_3:63269789-63269808 Msa0824140:intron 25.0%
!! TACTAAATTTTCTGATATGG+AGG + chr5_3:63269907-63269926 Msa0824140:CDS 25.0%
!! TCAGAAATCCATTTAATTTC+TGG - chr5_3:63270192-63270211 None:intergenic 25.0%
! CATCTGAAAAAGAATTTAGA+AGG + chr5_3:63270274-63270293 Msa0824140:CDS 25.0%
! AAAACATTCATGAGGAAATA+TGG - chr5_3:63270506-63270525 None:intergenic 25.0%
! GACTAAATAAAACATTCATG+AGG - chr5_3:63270514-63270533 None:intergenic 25.0%
!!! TTGTGCGTATTTAATTTTAC+AGG + chr5_3:63270617-63270636 Msa0824140:intron 25.0%
! GATATTTGATTCTTGATCAA+CGG - chr5_3:63270679-63270698 None:intergenic 25.0%
!! ATTTGTGATAGCAGTTATTT+TGG + chr5_3:63270761-63270780 Msa0824140:intron 25.0%
!!! TTTGTGATAGCAGTTATTTT+GGG + chr5_3:63270762-63270781 Msa0824140:intron 25.0%
! CAATTCCAATTATAGAATCA+AGG - chr5_3:63270883-63270902 None:intergenic 25.0%
! CTTGATTCTATAATTGGAAT+TGG + chr5_3:63270881-63270900 Msa0824140:CDS 25.0%
! AAAACTATTATGCTGTATGT+TGG - chr5_3:63271041-63271060 None:intergenic 25.0%
!! CAGCATAATAGTTTTTCTTT+TGG + chr5_3:63271046-63271065 Msa0824140:intron 25.0%
! TCACATACATGTATAGTTTA+TGG + chr5_3:63271090-63271109 Msa0824140:intron 25.0%
! TAAGGTAACATTACATCATT+AGG + chr5_3:63271499-63271518 Msa0824140:intron 25.0%
!! ATTCATATTGTCATTTCAGA+TGG + chr5_3:63271725-63271744 Msa0824140:intron 25.0%
! TTCTATACAAATAGTTACTC+AGG + chr5_3:63272137-63272156 Msa0824140:intron 25.0%
!! TATACACTCATATCATCTTT+TGG - chr5_3:63272191-63272210 None:intergenic 25.0%
!!! CATTGTTCTTAGTTTGTATT+TGG - chr5_3:63272676-63272695 None:intergenic 25.0%
! CAAATACAAACTAAGAACAA+TGG + chr5_3:63272674-63272693 Msa0824140:intron 25.0%
!!! GGTTGCATTTTTCAATTTTA+AGG + chr5_3:63272766-63272785 Msa0824140:intron 25.0%
! ATCTATTTGAACTTTCTTGA+AGG + chr5_3:63272844-63272863 Msa0824140:intron 25.0%
!! CCATTTAAAGAGTTTTCTTT+CGG + chr5_3:63272989-63273008 Msa0824140:three_prime_UTR 25.0%
! AATAAGCAATGTGATATTCA+AGG + chr5_3:63273325-63273344 Msa0824140:three_prime_UTR 25.0%
AGAGAATTTGAAGAAGAAGA+AGG - chr5_3:63268066-63268085 None:intergenic 30.0%
AAAAGTTCAACTGAAGAAGA+AGG - chr5_3:63268204-63268223 None:intergenic 30.0%
ATTAAAGGTCACTGAAACAA+AGG + chr5_3:63268251-63268270 Msa0824140:CDS 30.0%
ACTATACAATCCATAGTGTA+TGG + chr5_3:63268710-63268729 Msa0824140:intron 30.0%
GTATGGTATAATTGTTTCCA+TGG + chr5_3:63268727-63268746 Msa0824140:intron 30.0%
CTTAAGAGAAGATAATGCTA+AGG + chr5_3:63268802-63268821 Msa0824140:intron 30.0%
! CAGCATGTTTTCTTAAAAGA+GGG - chr5_3:63269190-63269209 None:intergenic 30.0%
TAACCAACAAGAATACTTTC+CGG - chr5_3:63269294-63269313 None:intergenic 30.0%
! AAGTATTCTTGTTGGTTATG+TGG + chr5_3:63269296-63269315 Msa0824140:CDS 30.0%
! AGTATTCTTGTTGGTTATGT+GGG + chr5_3:63269297-63269316 Msa0824140:CDS 30.0%
!!! GTTAGCTTTTTAGACAATGT+TGG + chr5_3:63269449-63269468 Msa0824140:intron 30.0%
CGTACTATAAAGATGTTTGT+TGG + chr5_3:63269576-63269595 Msa0824140:intron 30.0%
CTCACACAAATTTACTATCA+TGG - chr5_3:63269658-63269677 None:intergenic 30.0%
AATAACTTTGGACAAACGAT+TGG - chr5_3:63269770-63269789 None:intergenic 30.0%
!! TTGTTTTATAGGTTACTGGA+AGG + chr5_3:63269858-63269877 Msa0824140:intron 30.0%
! TGTTTTATAGGTTACTGGAA+GGG + chr5_3:63269859-63269878 Msa0824140:intron 30.0%
AAGATATCCGAGAGAATAAT+AGG - chr5_3:63269936-63269955 None:intergenic 30.0%
ATTATTCTCTCGGATATCTT+AGG + chr5_3:63269936-63269955 Msa0824140:CDS 30.0%
ATAACAGACTCAAAAAAAGG+AGG - chr5_3:63270012-63270031 None:intergenic 30.0%
GGTATAACAGACTCAAAAAA+AGG - chr5_3:63270015-63270034 None:intergenic 30.0%
ATGTTGCACCAGAAATTAAA+TGG + chr5_3:63270181-63270200 Msa0824140:CDS 30.0%
TGATGCATACAAAAACTTGA+AGG + chr5_3:63270212-63270231 Msa0824140:CDS 30.0%
ATAGATTCTGAACACTTGTT+TGG - chr5_3:63270483-63270502 None:intergenic 30.0%
!!! TGAATGTTTTATTTAGTCGC+AGG + chr5_3:63270516-63270535 Msa0824140:intron 30.0%
!! GCGTATTTAATTTTACAGGT+CGG + chr5_3:63270621-63270640 Msa0824140:intron 30.0%
!! TTGTGATAGCAGTTATTTTG+GGG + chr5_3:63270763-63270782 Msa0824140:intron 30.0%
AAACATTATACTACGTATGC+AGG + chr5_3:63270812-63270831 Msa0824140:intron 30.0%
!! AGGATTCAATTTTGATACAG+AGG + chr5_3:63270832-63270851 Msa0824140:intron 30.0%
!! TTCAATTTTGATACAGAGGA+TGG + chr5_3:63270836-63270855 Msa0824140:CDS 30.0%
ATTATAGAATCAAGGAAACC+TGG - chr5_3:63270875-63270894 None:intergenic 30.0%
GGTTTCCTTGATTCTATAAT+TGG + chr5_3:63270875-63270894 Msa0824140:CDS 30.0%
ATACATGTATGTGAACAAGT+TGG - chr5_3:63271084-63271103 None:intergenic 30.0%
GAATTGTGAGTAAAATTCTC+CGG + chr5_3:63271374-63271393 Msa0824140:intron 30.0%
CATATCGAAAAAATGTTGTG+AGG - chr5_3:63271571-63271590 None:intergenic 30.0%
TCAATACCTGCATTTCTAAT+AGG - chr5_3:63271812-63271831 None:intergenic 30.0%
CTTTATCCAATCAGAAAACT+TGG + chr5_3:63271848-63271867 Msa0824140:intron 30.0%
ACTTGGATTCCAACATTTAA+AGG + chr5_3:63271865-63271884 Msa0824140:intron 30.0%
ATGCTCAAGATATTCATTCA+CGG - chr5_3:63272016-63272035 None:intergenic 30.0%
TGAATATCTTGAGCATCATA+AGG + chr5_3:63272020-63272039 Msa0824140:CDS 30.0%
AAATTTGATCAAACAGAACC+TGG + chr5_3:63272053-63272072 Msa0824140:CDS 30.0%
! TCATATCATCTTTTGGCAAT+GGG - chr5_3:63272184-63272203 None:intergenic 30.0%
AGCAAGCAAATTCAAAAGTA+AGG - chr5_3:63272452-63272471 None:intergenic 30.0%
!! TACACGGTCCATTTTAAAAA+CGG - chr5_3:63272552-63272571 None:intergenic 30.0%
!!! TTTTTAAAATGGACCGTGTA+GGG + chr5_3:63272552-63272571 Msa0824140:intron 30.0%
!!! TCTCTTTTTGCTGTTTCAAA+AGG - chr5_3:63272614-63272633 None:intergenic 30.0%
! CAAAAGTCACTTCATTTTGT+AGG + chr5_3:63272730-63272749 Msa0824140:intron 30.0%
AAGGTTCAAGAAATACTAGA+AGG + chr5_3:63272863-63272882 Msa0824140:intron 30.0%
!! TCTCACTTTCCTAATTTGTT+TGG - chr5_3:63272961-63272980 None:intergenic 30.0%
CCGAAAGAAAACTCTTTAAA+TGG - chr5_3:63272992-63273011 None:intergenic 30.0%
ATAGTTGTTGGAAAGATTTG+AGG - chr5_3:63273231-63273250 None:intergenic 30.0%
GCGTATAACGAGAAATATAT+CGG - chr5_3:63273271-63273290 None:intergenic 30.0%
! ACATTGCTTATTTCCCTTTT+GGG - chr5_3:63273317-63273336 None:intergenic 30.0%
AAGAAGGAAGAGAGAAAGAA+GGG - chr5_3:63268050-63268069 None:intergenic 35.0%
GTTGAATGAAAGAAGATGAG+AGG - chr5_3:63268125-63268144 None:intergenic 35.0%
GAAGTGTGATGAAAAAGTGA+TGG - chr5_3:63268147-63268166 None:intergenic 35.0%
AGAAAAAGTAGCACATACTC+TGG - chr5_3:63268286-63268305 None:intergenic 35.0%
TACACTCATAACATTCTTCC+AGG - chr5_3:63268552-63268571 None:intergenic 35.0%
CGAACTTTGTAAACTCAACT+AGG - chr5_3:63268921-63268940 None:intergenic 35.0%
! GCAGCATGTTTTCTTAAAAG+AGG - chr5_3:63269191-63269210 None:intergenic 35.0%
AACCAACAAGAATACTTTCC+GGG - chr5_3:63269293-63269312 None:intergenic 35.0%
! GTATTCTTGTTGGTTATGTG+GGG + chr5_3:63269298-63269317 Msa0824140:CDS 35.0%
GGGGAGTAAAAATGTTCAAA+AGG + chr5_3:63269317-63269336 Msa0824140:CDS 35.0%
CTACGATCGAATCAATATTG+AGG + chr5_3:63269340-63269359 Msa0824140:CDS 35.0%
TAACATCAAGAAAGAACGCA+AGG - chr5_3:63269433-63269452 None:intergenic 35.0%
TATCATGGACATCGATAATG+TGG - chr5_3:63269643-63269662 None:intergenic 35.0%
!! TCATGTCAAAGGCATTTCAT+TGG - chr5_3:63269690-63269709 None:intergenic 35.0%
AATGAAATGCCTTTGACATG+AGG + chr5_3:63269689-63269708 Msa0824140:intron 35.0%
GAGGATACCTATTATTCTCT+CGG + chr5_3:63269926-63269945 Msa0824140:CDS 35.0%
!!! CTCGCTTATTTCACTTTTTC+AGG + chr5_3:63270142-63270161 Msa0824140:intron 35.0%
ATTCCTTCTGCTGAAAGTAA+AGG + chr5_3:63270705-63270724 Msa0824140:CDS 35.0%
GATGGTGAAATATTAGTACC+AGG + chr5_3:63270854-63270873 Msa0824140:CDS 35.0%
TCTATAATTGGAATTGGTCG+AGG + chr5_3:63270887-63270906 Msa0824140:CDS 35.0%
ATGTTTCAGGAAAAACAAGG+GGG - chr5_3:63270928-63270947 None:intergenic 35.0%
CATGTTTCAGGAAAAACAAG+GGG - chr5_3:63270929-63270948 None:intergenic 35.0%
CCATGTTTCAGGAAAAACAA+GGG - chr5_3:63270930-63270949 None:intergenic 35.0%
TCCATGTTTCAGGAAAAACA+AGG - chr5_3:63270931-63270950 None:intergenic 35.0%
CATACACAAACACAGATCAA+AGG - chr5_3:63271144-63271163 None:intergenic 35.0%
TGCTTCCGTTAAAGTTCAAT+GGG - chr5_3:63271175-63271194 None:intergenic 35.0%
TTGCTTCCGTTAAAGTTCAA+TGG - chr5_3:63271176-63271195 None:intergenic 35.0%
GCTTCTCTTTCATTTCTAAC+AGG + chr5_3:63271204-63271223 Msa0824140:intron 35.0%
ATTGCTGATAAACTTATCCC+TGG + chr5_3:63271277-63271296 Msa0824140:CDS 35.0%
AGTATGACAATTGCACTTGA+GGG - chr5_3:63271334-63271353 None:intergenic 35.0%
CTAACAATAAGTCTTTGACC+TGG - chr5_3:63271409-63271428 None:intergenic 35.0%
TTGTGAGGTACATTCTAATC+TGG - chr5_3:63271556-63271575 None:intergenic 35.0%
GAAACACATCATTATGCACA+AGG - chr5_3:63271607-63271626 None:intergenic 35.0%
TGTTCATCAAACAAGGATTG+AGG - chr5_3:63271765-63271784 None:intergenic 35.0%
! CAATCCTTGTTTGATGAACA+AGG + chr5_3:63271765-63271784 Msa0824140:CDS 35.0%
TCTACCTTGTTCATCAAACA+AGG - chr5_3:63271772-63271791 None:intergenic 35.0%
!! ATGCAGGTATTGATTCAAGT+AGG + chr5_3:63271819-63271838 Msa0824140:intron 35.0%
! TGGAATCCAAGTTTTCTGAT+TGG - chr5_3:63271857-63271876 None:intergenic 35.0%
AGATATTCATTCACGGACTT+TGG - chr5_3:63272009-63272028 None:intergenic 35.0%
ATATAGGCGTGAAAATATGC+AGG + chr5_3:63272089-63272108 Msa0824140:CDS 35.0%
! CTCATATCATCTTTTGGCAA+TGG - chr5_3:63272185-63272204 None:intergenic 35.0%
CTCAATCAGATTAAACTGAG+TGG - chr5_3:63272218-63272237 None:intergenic 35.0%
GAAGCTAGAGAACAACATAT+AGG - chr5_3:63272330-63272349 None:intergenic 35.0%
!! TCTTTGATGATGTCTTCAGT+AGG - chr5_3:63272352-63272371 None:intergenic 35.0%
TACTGAAGACATCATCAAAG+AGG + chr5_3:63272351-63272370 Msa0824140:CDS 35.0%
TTGACGTTTGAATTCAGCAA+TGG - chr5_3:63272386-63272405 None:intergenic 35.0%
TCAAAAACAAGAATACGACG+AGG + chr5_3:63272402-63272421 Msa0824140:CDS 35.0%
!!! GTTTTTAAAATGGACCGTGT+AGG + chr5_3:63272551-63272570 Msa0824140:intron 35.0%
AAGATACCGTGTAATCCTAT+CGG - chr5_3:63272704-63272723 None:intergenic 35.0%
! TCACTTCATTTTGTAGGCAA+TGG + chr5_3:63272736-63272755 Msa0824140:intron 35.0%
TTTGTAGGCAATGGTAGTTT+AGG + chr5_3:63272745-63272764 Msa0824140:intron 35.0%
AGAAATACTAGAAGGAGCTA+AGG + chr5_3:63272871-63272890 Msa0824140:CDS 35.0%
!! ACTTTCCTAATTTGTTTGGC+CGG - chr5_3:63272957-63272976 None:intergenic 35.0%
! AAAGCGCTAACAAAAACAGT+AGG + chr5_3:63273122-63273141 Msa0824140:three_prime_UTR 35.0%
! ACTTCTTTCTAGCATGGAAT+GGG - chr5_3:63273190-63273209 None:intergenic 35.0%
! AACTTCTTTCTAGCATGGAA+TGG - chr5_3:63273191-63273210 None:intergenic 35.0%
! TCTGTAACTTCTTTCTAGCA+TGG - chr5_3:63273196-63273215 None:intergenic 35.0%
TTCGATGCATACATAGTTGT+TGG - chr5_3:63273243-63273262 None:intergenic 35.0%
ATGTCAATGTCAATCCCAAA+AGG + chr5_3:63273300-63273319 Msa0824140:three_prime_UTR 35.0%
TGTCAATGTCAATCCCAAAA+GGG + chr5_3:63273301-63273320 Msa0824140:three_prime_UTR 35.0%
! CACATTGCTTATTTCCCTTT+TGG - chr5_3:63273318-63273337 None:intergenic 35.0%
ACTCAGCAGTTAAAAAAGAG+TGG + chr5_3:63273372-63273391 Msa0824140:three_prime_UTR 35.0%
GAAGAAGGAAGAGAGAAAGA+AGG - chr5_3:63268051-63268070 None:intergenic 40.0%
GAGGTTGAAGGAGTTGAATT+TGG - chr5_3:63268106-63268125 None:intergenic 40.0%
GAAAGAAGATGAGAGGTTGA+AGG - chr5_3:63268118-63268137 None:intergenic 40.0%
ACTGAAGAAGAAGGAGATGA+AGG - chr5_3:63268195-63268214 None:intergenic 40.0%
CCTTTAATTCAGCAGGAAGA+CGG - chr5_3:63268239-63268258 None:intergenic 40.0%
TCAGTGACCTTTAATTCAGC+AGG - chr5_3:63268246-63268265 None:intergenic 40.0%
!! AGTAGCACATACTCTGGAAT+TGG - chr5_3:63268280-63268299 None:intergenic 40.0%
CTATGCTGCATTGTTTGATG+TGG + chr5_3:63268343-63268362 Msa0824140:intron 40.0%
AATTGGACCTGAAATTTCGC+CGG + chr5_3:63268382-63268401 Msa0824140:intron 40.0%
! ATTGAAAGTGTAGCTAGTCC+TGG + chr5_3:63268531-63268550 Msa0824140:intron 40.0%
! TTGTTTCCATGGAAGAGTGT+AGG + chr5_3:63268738-63268757 Msa0824140:intron 40.0%
TGAGTTTACAAAGTTCGCCA+AGG + chr5_3:63268924-63268943 Msa0824140:CDS 40.0%
! GTTTTACTTCAACAGGTACC+TGG + chr5_3:63269246-63269265 Msa0824140:intron 40.0%
!!! TTTTTTCCAGGACGAAATCC+AGG - chr5_3:63269267-63269286 None:intergenic 40.0%
TGGATTTCGTCCTGGAAAAA+AGG + chr5_3:63269266-63269285 Msa0824140:CDS 40.0%
CGATCGAATCAATATTGAGG+AGG + chr5_3:63269343-63269362 Msa0824140:CDS 40.0%
AACAGCGGTATGTTGTAATC+TGG + chr5_3:63269383-63269402 Msa0824140:intron 40.0%
CATGATCAAGGAATCACTCA+TGG - chr5_3:63269502-63269521 None:intergenic 40.0%
CATGAGTGATTCCTTGATCA+TGG + chr5_3:63269500-63269519 Msa0824140:intron 40.0%
CTGTTTACTAGCCATGATCA+AGG - chr5_3:63269514-63269533 None:intergenic 40.0%
TTGTGTTAGTGCAATGTGCA+TGG - chr5_3:63269603-63269622 None:intergenic 40.0%
TGGACATCGATAATGTGGAA+TGG - chr5_3:63269638-63269657 None:intergenic 40.0%
GTAACAAGTCCTCATGTCAA+AGG - chr5_3:63269701-63269720 None:intergenic 40.0%
ATCTGCAGTGTAGAAGTCAT+CGG - chr5_3:63270103-63270122 None:intergenic 40.0%
CTGAAAGTTGTTACTGACAG+AGG + chr5_3:63270318-63270337 Msa0824140:CDS 40.0%
ACAAGTGTCAGTTAGTTGAC+TGG - chr5_3:63270371-63270390 None:intergenic 40.0%
CGTTATAAAACGACTTGCAG+AGG - chr5_3:63270447-63270466 None:intergenic 40.0%
CTACCTTTACTTTCAGCAGA+AGG - chr5_3:63270711-63270730 None:intergenic 40.0%
CTTCTGCTGAAAGTAAAGGT+AGG + chr5_3:63270709-63270728 Msa0824140:intron 40.0%
TAGGTGATGTGCTTGCAAAA+TGG + chr5_3:63270728-63270747 Msa0824140:intron 40.0%
!!! CCCTTGTTTTTCCTGAAACA+TGG + chr5_3:63270927-63270946 Msa0824140:CDS 40.0%
! TTTTCCTGAAACATGGAAGC+AGG + chr5_3:63270934-63270953 Msa0824140:CDS 40.0%
! TTTTCCTGCTTCCATGTTTC+AGG - chr5_3:63270941-63270960 None:intergenic 40.0%
TAAACTGAGCATGAACACCT+TGG - chr5_3:63270967-63270986 None:intergenic 40.0%
ACGAGCCCATTGAACTTTAA+CGG + chr5_3:63271167-63271186 Msa0824140:intron 40.0%
TTACAGAGATTTACCAGAGC+TGG + chr5_3:63271246-63271265 Msa0824140:CDS 40.0%
CAGTATGACAATTGCACTTG+AGG - chr5_3:63271335-63271354 None:intergenic 40.0%
TTTGACCTGGAAATTCATGC+CGG - chr5_3:63271396-63271415 None:intergenic 40.0%
TAGCTGTTTGCTCTATCTCT+TGG - chr5_3:63271439-63271458 None:intergenic 40.0%
AAGAGATAGAGCAAACAGCT+AGG + chr5_3:63271438-63271457 Msa0824140:CDS 40.0%
AGAGATAGAGCAAACAGCTA+GGG + chr5_3:63271439-63271458 Msa0824140:CDS 40.0%
GAACAAGGTAGACAGCTATA+TGG + chr5_3:63271780-63271799 Msa0824140:CDS 40.0%
ATCCAGCCTATTAGAAATGC+AGG + chr5_3:63271803-63271822 Msa0824140:CDS 40.0%
TACCTGCATTTCTAATAGGC+TGG - chr5_3:63271808-63271827 None:intergenic 40.0%
AAAACTAACTGAAGAGCAGC+TGG + chr5_3:63271969-63271988 Msa0824140:CDS 40.0%
TATATATGTCACCAACTGCC+AGG - chr5_3:63272074-63272093 None:intergenic 40.0%
!! TGGCAGTTGGTGACATATAT+AGG + chr5_3:63272073-63272092 Msa0824140:CDS 40.0%
!! AGGAAGTGTTTATCCCTACA+CGG - chr5_3:63272568-63272587 None:intergenic 40.0%
AAGAACAATGGCTATCCGAT+AGG + chr5_3:63272686-63272705 Msa0824140:intron 40.0%
ACAAAATGAGAGACAAGCAC+CGG + chr5_3:63272935-63272954 Msa0824140:exon 40.0%
GGAGAAGCTGAAACAGTGAA+GGG - chr5_3:63268174-63268193 None:intergenic 45.0%
AGGAGAAGCTGAAACAGTGA+AGG - chr5_3:63268175-63268194 None:intergenic 45.0%
!! CAGGAAGACGGTCATTTTCT+GGG - chr5_3:63268227-63268246 None:intergenic 45.0%
CCGTCTTCCTGCTGAATTAA+AGG + chr5_3:63268236-63268255 Msa0824140:CDS 45.0%
CCACATGCAATCTAACCTGA+AGG - chr5_3:63268858-63268877 None:intergenic 45.0%
! CCTTCAGGTTAGATTGCATG+TGG + chr5_3:63268855-63268874 Msa0824140:intron 45.0%
TCAGGTTAGATTGCATGTGG+AGG + chr5_3:63268858-63268877 Msa0824140:intron 45.0%
TATGCGAGGACTGTTACGAA+AGG + chr5_3:63268893-63268912 Msa0824140:CDS 45.0%
ATGCGAGGACTGTTACGAAA+GGG + chr5_3:63268894-63268913 Msa0824140:CDS 45.0%
GCATGGAAGAGAATGTAGAG+TGG - chr5_3:63269103-63269122 None:intergenic 45.0%
!! GTCCCGGAAAGTATTCTTGT+TGG + chr5_3:63269288-63269307 Msa0824140:CDS 45.0%
ACTTTCACACGCTGTAACAG+CGG + chr5_3:63269368-63269387 Msa0824140:CDS 45.0%
TGTTACTGACAGAGGACTAC+AGG + chr5_3:63270326-63270345 Msa0824140:CDS 45.0%
TGGAAGCAGGAAAATCTCCA+AGG + chr5_3:63270947-63270966 Msa0824140:CDS 45.0%
GCAATAGAATCATCCAGCTC+TGG - chr5_3:63271262-63271281 None:intergenic 45.0%
AAAAGTCACCTGTTGCACTG+TGG - chr5_3:63271308-63271327 None:intergenic 45.0%
ATTCTCCGGCATGAATTTCC+AGG + chr5_3:63271388-63271407 Msa0824140:intron 45.0%
ATCAAACAGAACCTGGCAGT+TGG + chr5_3:63272060-63272079 Msa0824140:CDS 45.0%
ATACGACGAGGAACGTGTAA+AGG + chr5_3:63272414-63272433 Msa0824140:CDS 45.0%
GGCTATCCGATAGGATTACA+CGG + chr5_3:63272695-63272714 Msa0824140:intron 45.0%
! AAGGAGCTAAGGTGCTAGAA+TGG + chr5_3:63272882-63272901 Msa0824140:CDS 45.0%
!! AAGCACCGGCCAAACAAATT+AGG + chr5_3:63272949-63272968 Msa0824140:three_prime_UTR 45.0%
CTGCAAATGGAACTCTTTGC+AGG - chr5_3:63273164-63273183 None:intergenic 45.0%
! TCTTTCTAGCATGGAATGGG+TGG - chr5_3:63273187-63273206 None:intergenic 45.0%
!! AATTATAAAATACATATAAA+AGG - chr5_3:63270576-63270595 None:intergenic 5.0%
CTGTTTGATTGCTGCTGCCA+TGG + chr5_3:63267981-63268000 Msa0824140:exon 50.0%
AGTTCGAGTACAGAGCTCCA+TGG - chr5_3:63268001-63268020 None:intergenic 50.0%
!! GCAGGAAGACGGTCATTTTC+TGG - chr5_3:63268228-63268247 None:intergenic 50.0%
CTTGCACCTACACTCTTCCA+TGG - chr5_3:63268747-63268766 None:intergenic 50.0%
TCGTCCTGGAAAAAAGGTCC+CGG + chr5_3:63269272-63269291 Msa0824140:CDS 50.0%
!!! CTTTCCGGGACCTTTTTTCC+AGG - chr5_3:63269279-63269298 None:intergenic 50.0%
!! AGAAGGCGTTACAAGTCAGC+TGG + chr5_3:63270291-63270310 Msa0824140:CDS 50.0%
GTTGCACTGTGGTACATCCA+GGG - chr5_3:63271297-63271316 None:intergenic 50.0%
TGTTGCACTGTGGTACATCC+AGG - chr5_3:63271298-63271317 None:intergenic 50.0%
TGGATGTACCACAGTGCAAC+AGG + chr5_3:63271297-63271316 Msa0824140:CDS 50.0%
CGAGGAACGTGTAAAGGAAC+AGG + chr5_3:63272420-63272439 Msa0824140:CDS 50.0%
ATGGAATGGGTGGCTGCAAA+TGG - chr5_3:63273177-63273196 None:intergenic 50.0%
! TGTTGCGCCGGCGAAATTTC+AGG - chr5_3:63268392-63268411 None:intergenic 55.0%
ATTTCGCCGGCGCAACAGTA+TGG + chr5_3:63268395-63268414 Msa0824140:intron 55.0%
TTTCGCCGGCGCAACAGTAT+GGG + chr5_3:63268396-63268415 Msa0824140:intron 55.0%
GTCTTCCCATACTGTTGCGC+CGG - chr5_3:63268404-63268423 None:intergenic 55.0%
CAGTCCTCGCATACCAGTGA+CGG - chr5_3:63268886-63268905 None:intergenic 55.0%
CAGGTACCTGGATTTCGTCC+TGG + chr5_3:63269258-63269277 Msa0824140:intron 55.0%
GGTTACTGGAAGGGCTTTGC+AGG + chr5_3:63269868-63269887 Msa0824140:intron 55.0%
!! GCATGTGGAGGTACCGTCAC+TGG + chr5_3:63268870-63268889 Msa0824140:CDS 60.0%
GGTACCGTCACTGGTATGCG+AGG + chr5_3:63268879-63268898 Msa0824140:CDS 60.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 63267965 63273428 63267965 ID=Msa0824140;Name=Msa0824140
chr5_3 mRNA 63267965 63273428 63267965 ID=Msa0824140-mRNA-1;Parent=Msa0824140;Name=Msa0824140-mRNA-1;_AED=0.11;_eAED=0.11;_QI=35|1|1|1|1|1|13|485|535
chr5_3 exon 63267965 63268287 63267965 ID=Msa0824140-mRNA-1:exon:19661;Parent=Msa0824140-mRNA-1
chr5_3 exon 63268862 63268945 63268862 ID=Msa0824140-mRNA-1:exon:19662;Parent=Msa0824140-mRNA-1
chr5_3 exon 63269261 63269389 63269261 ID=Msa0824140-mRNA-1:exon:19663;Parent=Msa0824140-mRNA-1
chr5_3 exon 63269869 63269957 63269869 ID=Msa0824140-mRNA-1:exon:19664;Parent=Msa0824140-mRNA-1
chr5_3 exon 63270164 63270347 63270164 ID=Msa0824140-mRNA-1:exon:19665;Parent=Msa0824140-mRNA-1
chr5_3 exon 63270639 63270726 63270639 ID=Msa0824140-mRNA-1:exon:19666;Parent=Msa0824140-mRNA-1
chr5_3 exon 63270834 63270988 63270834 ID=Msa0824140-mRNA-1:exon:19667;Parent=Msa0824140-mRNA-1
chr5_3 exon 63271226 63271318 63271226 ID=Msa0824140-mRNA-1:exon:19668;Parent=Msa0824140-mRNA-1
chr5_3 exon 63271410 63271502 63271410 ID=Msa0824140-mRNA-1:exon:19669;Parent=Msa0824140-mRNA-1
chr5_3 exon 63271744 63271824 63271744 ID=Msa0824140-mRNA-1:exon:19670;Parent=Msa0824140-mRNA-1
chr5_3 exon 63271961 63272110 63271961 ID=Msa0824140-mRNA-1:exon:19671;Parent=Msa0824140-mRNA-1
chr5_3 exon 63272346 63272441 63272346 ID=Msa0824140-mRNA-1:exon:19672;Parent=Msa0824140-mRNA-1
chr5_3 exon 63272866 63273428 63272866 ID=Msa0824140-mRNA-1:exon:19673;Parent=Msa0824140-mRNA-1
chr5_3 five_prime_UTR 63267965 63267999 63267965 ID=Msa0824140-mRNA-1:five_prime_utr;Parent=Msa0824140-mRNA-1
chr5_3 CDS 63268000 63268287 63268000 ID=Msa0824140-mRNA-1:cds;Parent=Msa0824140-mRNA-1
chr5_3 CDS 63268862 63268945 63268862 ID=Msa0824140-mRNA-1:cds;Parent=Msa0824140-mRNA-1
chr5_3 CDS 63269261 63269389 63269261 ID=Msa0824140-mRNA-1:cds;Parent=Msa0824140-mRNA-1
chr5_3 CDS 63269869 63269957 63269869 ID=Msa0824140-mRNA-1:cds;Parent=Msa0824140-mRNA-1
chr5_3 CDS 63270164 63270347 63270164 ID=Msa0824140-mRNA-1:cds;Parent=Msa0824140-mRNA-1
chr5_3 CDS 63270639 63270726 63270639 ID=Msa0824140-mRNA-1:cds;Parent=Msa0824140-mRNA-1
chr5_3 CDS 63270834 63270988 63270834 ID=Msa0824140-mRNA-1:cds;Parent=Msa0824140-mRNA-1
chr5_3 CDS 63271226 63271318 63271226 ID=Msa0824140-mRNA-1:cds;Parent=Msa0824140-mRNA-1
chr5_3 CDS 63271410 63271502 63271410 ID=Msa0824140-mRNA-1:cds;Parent=Msa0824140-mRNA-1
chr5_3 CDS 63271744 63271824 63271744 ID=Msa0824140-mRNA-1:cds;Parent=Msa0824140-mRNA-1
chr5_3 CDS 63271961 63272110 63271961 ID=Msa0824140-mRNA-1:cds;Parent=Msa0824140-mRNA-1
chr5_3 CDS 63272346 63272441 63272346 ID=Msa0824140-mRNA-1:cds;Parent=Msa0824140-mRNA-1
chr5_3 CDS 63272866 63272943 63272866 ID=Msa0824140-mRNA-1:cds;Parent=Msa0824140-mRNA-1
chr5_3 three_prime_UTR 63272944 63273428 63272944 ID=Msa0824140-mRNA-1:three_prime_utr;Parent=Msa0824140-mRNA-1
Gene Sequence

>Msa0824140

ATGGAGCTCTGTACTCGAACTTTCACAACTACTTCTCTTCTTTTCAACCCTTCTTTCTCTCTTCCTTCTTCTTCTTCAAATTCTCTTCATCTTCATCTTCATTCCAAATTCAACTCCTTCAACCTCTCATCTTCTTTCATTCAACCATCACTTTTTCATCACACTTCTTCTCCCTTCACTGTTTCAGCTTCTCCTTCATCTCCTTCTTCTTCAGTTGAACTTTTCCCAGAAAATGACCGTCTTCCTGCTGAATTAAAGGTCACTGAAACAAAGGAATCCAATTCCAGAGTTAGATTGCATGTGGAGGTACCGTCACTGGTATGCGAGGACTGTTACGAAAGGGTCCTAGTTGAGTTTACAAAGTTCGCCAAGGTACCTGGATTTCGTCCTGGAAAAAAGGTCCCGGAAAGTATTCTTGTTGGTTATGTGGGGAGTAAAAATGTTCAAAAGGCTACGATCGAATCAATATTGAGGAGGACACTTTCACACGCTGTAACAGCGGTTACTGGAAGGGCTTTGCAGGATTCTATACGTATAGTTACTAAATTTTCTGATATGGAGGATACCTATTATTCTCTCGGATATCTTAGGTATGATGTGATTGTTGATGTTGCACCAGAAATTAAATGGATTTCTGATGATGCATACAAAAACTTGAAGGTTGTTGTTGAGATAGACAGTGAAATAGATGCTCACATAGCATCTGAAAAAGAATTTAGAAGGCGTTACAAGTCAGCTGGTGTACTGAAAGTTGTTACTGACAGAGGACTACAGGTCGGTGATGTTGTTGTACTTGACATCTCAGCAACGACCGTTGATCAAGAATCAAATATCAAAAATATTCCTTCTGCTGAAAGTAAAGGATTCAATTTTGATACAGAGGATGGTGAAATATTAGTACCAGGTTTCCTTGATTCTATAATTGGAATTGGTCGAGGCGAAACAAAGTCATTCCCCCTTGTTTTTCCTGAAACATGGAAGCAGGAAAATCTCCAAGGTGTTCATGCTCAGTTTACTGTTGAGTGCAAAGAACTTTTTTACAGAGATTTACCAGAGCTGGATGATTCTATTGCTGATAAACTTATCCCTGGATGTACCACAGTGCAACAGGTCAAAGACTTATTGTTAGAAAGATTCCAAGAGATAGAGCAAACAGCTAGGGAACAAGCAACTGATAATGCTATATTAGATCAGATTTCTAAGATGGTAGAAGTTGATATACCTCAATCCTTGTTTGATGAACAAGGTAGACAGCTATATGGATCCAGCCTATTAGAAATGCAGACAAAAATAAAACTAACTGAAGAGCAGCTGGCTACTCTATCAAGTCCAAAGTCCGTGAATGAATATCTTGAGCATCATAAGGAAAATATTACAAATTTGATCAAACAGAACCTGGCAGTTGGTGACATATATAGGCGTGAAAATATGCAGCTTCCTACTGAAGACATCATCAAAGAGGTTGAGAATTCCATTGCTGAATTCAAACGTCAAAAACAAGAATACGACGAGGAACGTGTAAAGGAACAGGTTCAAGAAATACTAGAAGGAGCTAAGGTGCTAGAATGGTTGAGAGAACATGCAGAAGTTCAGTATATAACAAAATGA

Protein sequence

>Msa0824140

MELCTRTFTTTSLLFNPSFSLPSSSSNSLHLHLHSKFNSFNLSSSFIQPSLFHHTSSPFTVSASPSSPSSSVELFPENDRLPAELKVTETKESNSRVRLHVEVPSLVCEDCYERVLVEFTKFAKVPGFRPGKKVPESILVGYVGSKNVQKATIESILRRTLSHAVTAVTGRALQDSIRIVTKFSDMEDTYYSLGYLRYDVIVDVAPEIKWISDDAYKNLKVVVEIDSEIDAHIASEKEFRRRYKSAGVLKVVTDRGLQVGDVVVLDISATTVDQESNIKNIPSAESKGFNFDTEDGEILVPGFLDSIIGIGRGETKSFPLVFPETWKQENLQGVHAQFTVECKELFYRDLPELDDSIADKLIPGCTTVQQVKDLLLERFQEIEQTAREQATDNAILDQISKMVEVDIPQSLFDEQGRQLYGSSLLEMQTKIKLTEEQLATLSSPKSVNEYLEHHKENITNLIKQNLAVGDIYRRENMQLPTEDIIKEVENSIAEFKRQKQEYDEERVKEQVQEILEGAKVLEWLREHAEVQYITK*