AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0258380

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0258380 MtrunA17_Chr2g0320921 90.201 847 66 3 1 834 1 843 0.0 1498
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0258380 AT5G22640.1 49.880 832 358 12 32 821 50 864 0.0 752
Msa0258380 AT5G22640.2 60.922 499 181 3 32 520 50 544 0.0 646
Msa0258380 AT5G22640.3 51.196 627 249 11 237 821 2 613 0.0 566

Find 221 sgRNAs with CRISPR-Local

Find 619 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAGCCATTCTCTCTCTTC+TGG 0.161520 2_2:-54700503 None:intergenic
GGACTGGTGCTTCAGTGTTT+TGG 0.197606 2_2:-54697272 None:intergenic
CCATTCATCCCTCTCATAAT+AGG 0.203599 2_2:-54700576 None:intergenic
TGAACCTTACTTCATAAAAT+TGG 0.221404 2_2:-54702795 None:intergenic
TTGAGAGAGCTTTGGGATAA+TGG 0.233445 2_2:+54697456 Msa0258380:CDS
TGTTACAGGTTCCTGATTAC+TGG 0.234389 2_2:+54702884 Msa0258380:intron
GGTTTGATAACCTAGGAAAA+TGG 0.251822 2_2:+54703768 Msa0258380:CDS
AATTCTTCAATAACATCTTT+AGG 0.263590 2_2:-54697651 None:intergenic
GAAAATTAGTGAAATGAAAA+AGG 0.269320 2_2:+54703805 Msa0258380:CDS
GATATTGCACCATCGAGTTT+TGG 0.272261 2_2:+54704043 Msa0258380:CDS
TGAGAGAGCTTTGGGATAAT+GGG 0.275118 2_2:+54697457 Msa0258380:CDS
ACTAATCATTCTGCTATTAA+AGG 0.278113 2_2:+54697627 Msa0258380:CDS
CGGCTTTCAGCCTACCCTTT+TGG 0.278462 2_2:-54705161 None:intergenic
CTGAAGGGAAGATAATAAAA+AGG 0.282694 2_2:+54700468 Msa0258380:CDS
GCTAGTGAAGTTGTAGAAAA+TGG 0.287833 2_2:-54704121 None:intergenic
TTATTTACTTAGCGGTAAAT+AGG 0.287909 2_2:-54696994 None:intergenic
TTCCTATAAGGAAGATAAAA+AGG 0.292162 2_2:-54697585 None:intergenic
TAAAGATGTTATTGAAGAAT+TGG 0.297588 2_2:+54697653 Msa0258380:CDS
GATGAATGGGTTAAGGAGTT+TGG 0.301803 2_2:+54700590 Msa0258380:CDS
TGAGGTTCTCTTTGGATGTT+TGG 0.305532 2_2:-54705402 None:intergenic
TTGTTAAGCAGGACAAATTC+AGG 0.305982 2_2:-54703467 None:intergenic
ATTTGAAGTGAGGTTCTCTT+TGG 0.308838 2_2:-54705410 None:intergenic
TGTGAAGTGGAAGCATTATA+AGG 0.309843 2_2:+54697542 Msa0258380:CDS
CTACATTAATTAAACTTGAA+TGG 0.311924 2_2:+54697022 Msa0258380:five_prime_UTR
CATTCATCCCTCTCATAATA+GGG 0.321040 2_2:-54700575 None:intergenic
TGGCAACCACCTTTGCAAAA+AGG 0.323564 2_2:+54703617 Msa0258380:CDS
GTCAGTTTCCCTCCTGTGAT+TGG 0.326869 2_2:+54705138 Msa0258380:CDS
AGAAGATTTGAGAGAGCTTT+GGG 0.329983 2_2:+54697449 Msa0258380:CDS
TTAGATATGAAGGAACTCTT+TGG 0.332618 2_2:+54698759 Msa0258380:intron
AATGATTGTTGCAGCTTTGA+TGG 0.333289 2_2:-54705027 None:intergenic
TGCAACAATCATTTCCATTC+TGG 0.336605 2_2:+54705037 Msa0258380:CDS
TCTTTCCAATTCTCATCATC+AGG 0.337468 2_2:-54697426 None:intergenic
TAAGGTTGGTTGTTGTTTGC+GGG 0.343226 2_2:-54697094 None:intergenic
GTTGAGTCAAGAAGTTATTC+AGG 0.343371 2_2:+54705204 Msa0258380:CDS
ACTTCAAATTTAAGCTTTGA+AGG 0.350865 2_2:+54705424 Msa0258380:CDS
CAAGCCATTCTCTCTCTTCT+GGG 0.352645 2_2:-54700502 None:intergenic
AAGAAGATTTGAGAGAGCTT+TGG 0.357631 2_2:+54697448 Msa0258380:CDS
TAATTAAACTTGAATGGAAC+TGG 0.357988 2_2:+54697028 Msa0258380:five_prime_UTR
TTAGTAGGTACAGGAGGAAT+AGG 0.360057 2_2:-54697609 None:intergenic
TCTGGGTCGAATTCGGAGGC+TGG 0.360552 2_2:-54697294 None:intergenic
TTCCACCTGATGATGAGAAT+TGG 0.360876 2_2:+54697421 Msa0258380:CDS
TGAGAAAGTTGACCCTAAAA+AGG 0.365613 2_2:+54703640 Msa0258380:CDS
GATAGAAGCTGAATTATGTT+TGG 0.365778 2_2:+54703853 Msa0258380:CDS
AATGGGAATAACACCATTAC+TGG 0.371101 2_2:+54697474 Msa0258380:CDS
TGTAGAAAATGGCGATTTGC+CGG 0.374317 2_2:-54704110 None:intergenic
TAGATATGAAGGAACTCTTT+GGG 0.377987 2_2:+54698760 Msa0258380:intron
CGGGTCTTCAGGGTCAGGCT+CGG 0.378073 2_2:-54703495 None:intergenic
CCCTCCTGTGATTGGCCAAA+AGG 0.382992 2_2:+54705146 Msa0258380:CDS
TGAGAGGGATGAATGGGTTA+AGG 0.388463 2_2:+54700583 Msa0258380:CDS
TTCGACATCGAGGTCGTCTT+GGG 0.388583 2_2:-54697226 None:intergenic
TTTCAGCTGCACGCTGGTAT+AGG 0.396522 2_2:+54701568 Msa0258380:intron
GATAGTTATCTTCTTGCAAA+TGG 0.399040 2_2:+54700539 Msa0258380:CDS
TATTTAATACCGCTGAAGTT+TGG 0.403494 2_2:-54701459 None:intergenic
TTAATAGCAGAATGATTAGT+AGG 0.408842 2_2:-54697624 None:intergenic
GGAGGAATAGGTTTCCTATA+AGG 0.411609 2_2:-54697597 None:intergenic
TCGAATTCGGAGGCTGGGAC+TGG 0.415203 2_2:-54697288 None:intergenic
TTGGAGTCGGAGGGTGGTGG+TGG 0.417529 2_2:-54697153 None:intergenic
GAGAAACATTGTTGAAGATA+AGG 0.420184 2_2:-54697112 None:intergenic
CTCATCCTTCACACTCCAAC+CGG 0.421667 2_2:+54703545 Msa0258380:CDS
CCTGTTATAGAACCTGTTCC+CGG 0.424006 2_2:+54700324 Msa0258380:CDS
ATTCGACATCGAGGTCGTCT+TGG 0.429381 2_2:-54697227 None:intergenic
GCATGCTGTGGATCATTATA+CGG 0.429585 2_2:-54702724 None:intergenic
CCGGGAACAGGTTCTATAAC+AGG 0.430966 2_2:-54700324 None:intergenic
TATGTTTGGAAGAGGCCATT+GGG 0.431358 2_2:+54703867 Msa0258380:CDS
GTTTGATAACCTAGGAAAAT+GGG 0.431396 2_2:+54703769 Msa0258380:CDS
ATCTTGTTTGACTACAGAAC+CGG 0.434750 2_2:-54703969 None:intergenic
TCAATAACACCATGACCCTC+TGG 0.435554 2_2:-54700291 None:intergenic
TTTGACGGGTCTTCAGGGTC+AGG 0.438983 2_2:-54703500 None:intergenic
ACATACTTGGACCCGGGAAC+AGG 0.442435 2_2:-54700336 None:intergenic
AATATGGAATACGTATGTTC+TGG 0.442630 2_2:+54703597 Msa0258380:CDS
GGGTCTTCAGGGTCAGGCTC+GGG 0.442845 2_2:-54703494 None:intergenic
TAGATAAATTATTTACTTAG+CGG 0.444917 2_2:-54697002 None:intergenic
TTTCTATATCATAGGTATGA+AGG 0.446030 2_2:+54700249 Msa0258380:intron
TGCCAGCTGAGTTGGAATAC+TGG 0.446775 2_2:+54702986 Msa0258380:CDS
TATGTCGAGGATGAGAAATA+TGG 0.449653 2_2:+54703581 Msa0258380:CDS
CACCATTACTGGTACTGGTT+GGG 0.454895 2_2:+54697485 Msa0258380:CDS
AATAACACCATTACTGGTAC+TGG 0.456394 2_2:+54697480 Msa0258380:CDS
GATACCTATGCCAGCTGAGT+TGG 0.457310 2_2:+54702978 Msa0258380:CDS
GATCCAACCTTGTTCCAGAA+TGG 0.459069 2_2:-54705051 None:intergenic
AACATTGTTGAAGATAAGGT+TGG 0.462424 2_2:-54697108 None:intergenic
TCCTCAGGCGTAGCAAAAGC+AGG 0.464185 2_2:-54697510 None:intergenic
CTTCTCCAGATGGACTTGTC+AGG 0.467032 2_2:+54698813 Msa0258380:CDS
GGATGAGTCGGAGTCGGAAT+CGG 0.467762 2_2:-54697184 None:intergenic
ATAAGGTTGGTTGTTGTTTG+CGG 0.468497 2_2:-54697095 None:intergenic
TCATCAGGTGGAAAATCAAA+CGG 0.471502 2_2:-54697411 None:intergenic
ATGTTGTCTAAATCCCTCTC+TGG 0.472786 2_2:-54705339 None:intergenic
GATGATATTGCTCAAGGAAA+AGG 0.473909 2_2:+54698782 Msa0258380:CDS
CACAACTCACCGCAGAGATA+AGG 0.476851 2_2:-54704159 None:intergenic
ATTGCGTAGAAGAGAGAAAG+AGG 0.477384 2_2:+54703904 Msa0258380:CDS
CCTATTATGAGAGGGATGAA+TGG 0.477757 2_2:+54700576 Msa0258380:CDS
GCAGAATGATTAGTAGGTAC+AGG 0.480235 2_2:-54697618 None:intergenic
TTCACATATTCCCATTCCTC+AGG 0.482160 2_2:-54697525 None:intergenic
TCATATGTGTCACACTTTGT+TGG 0.485177 2_2:-54705646 None:intergenic
CAGCTGGCATAGGTATCCTA+AGG 0.486521 2_2:-54702972 None:intergenic
AAATAATGCATTATGCATAC+AGG 0.486979 2_2:-54705584 None:intergenic
CTTTCTATAGATCTCCCCTT+AGG 0.487320 2_2:+54702956 Msa0258380:CDS
GTGAAGTGGAAGCATTATAA+GGG 0.489573 2_2:+54697543 Msa0258380:CDS
GCTCGGGTTCCTTGTTAAGC+AGG 0.489747 2_2:-54703478 None:intergenic
CCTCCTGTGATTGGCCAAAA+GGG 0.490125 2_2:+54705147 Msa0258380:CDS
GGAAGAGGCCATTGGGGACA+TGG 0.491646 2_2:+54703874 Msa0258380:CDS
ACAAACCTGACAAGTCCATC+TGG 0.492218 2_2:-54698818 None:intergenic
GACATAATTGATGATAAATC+CGG 0.492776 2_2:-54703564 None:intergenic
CTGGGTCGAATTCGGAGGCT+GGG 0.494605 2_2:-54697293 None:intergenic
GTAGAAAATGGCGATTTGCC+GGG 0.495368 2_2:-54704109 None:intergenic
TAAAATTGGTTAATGAAGCC+AGG 0.495775 2_2:-54702781 None:intergenic
CTATTATGAGAGGGATGAAT+GGG 0.496621 2_2:+54700577 Msa0258380:CDS
TTGAAGTCCCCTATTATGAG+AGG 0.496719 2_2:+54700567 Msa0258380:CDS
AGAGAGAGAATGGCTTGATA+AGG 0.498294 2_2:+54700508 Msa0258380:CDS
CTAAACATCATACTTCCATC+TGG 0.499339 2_2:-54701631 None:intergenic
TAGGTTATCAAACCATGGCT+TGG 0.500218 2_2:-54703759 None:intergenic
GATTGAAGAGTTTCTCAAAT+GGG 0.501735 2_2:+54697680 Msa0258380:CDS
AGCTGAATTATGTTTGGAAG+AGG 0.502575 2_2:+54703859 Msa0258380:CDS
TTTCCATTCTGGAACAAGGT+TGG 0.503912 2_2:+54705048 Msa0258380:CDS
GTTCACAAACATGCGAGCCT+TGG 0.504894 2_2:-54701605 None:intergenic
GAACCGGTATCATCTTCATC+TGG 0.507816 2_2:-54703953 None:intergenic
TTATGTTTGGAAGAGGCCAT+TGG 0.510151 2_2:+54703866 Msa0258380:CDS
GAAGAAGCAATGCGAGCTGA+AGG 0.512756 2_2:+54700452 Msa0258380:CDS
GGATTGAAGAGTTTCTCAAA+TGG 0.515739 2_2:+54697679 Msa0258380:CDS
ATCATTTCCATTCTGGAACA+AGG 0.521145 2_2:+54705044 Msa0258380:CDS
TGTCCCCAGAAGAGAGAGAA+TGG 0.525180 2_2:+54700498 Msa0258380:CDS
ACACCATTACTGGTACTGGT+TGG 0.525319 2_2:+54697484 Msa0258380:CDS
CTTCATCTTCTTCATCTACA+CGG 0.528670 2_2:-54704000 None:intergenic
ATACGCGCATGAAGTAGATC+AGG 0.529667 2_2:+54702912 Msa0258380:CDS
ATCAGCGATGTGAAAACAGC+TGG 0.530970 2_2:+54705111 Msa0258380:CDS
CTTTGGGATGATATTGCTCA+AGG 0.531578 2_2:+54698776 Msa0258380:CDS
TTCATCTTCTTCATCTACAC+GGG 0.533739 2_2:-54703999 None:intergenic
AAAGGTCGCTATCGTTATGC+TGG 0.534373 2_2:+54700737 Msa0258380:CDS
CATCAGGTGGAAAATCAAAC+GGG 0.534536 2_2:-54697410 None:intergenic
TGAGTCGGAGTCGGAATCGG+AGG 0.534988 2_2:-54697181 None:intergenic
GCTGCATGCGGCACCAGAGA+GGG 0.535166 2_2:+54705326 Msa0258380:CDS
CAGCATGCTTACTTGTATGA+AGG 0.538200 2_2:+54702739 Msa0258380:CDS
CAAAGCTTAAATTTGAAGTG+AGG 0.539205 2_2:-54705420 None:intergenic
ATCATAGGTATGAAGGTGAA+TGG 0.539261 2_2:+54700256 Msa0258380:intron
AGGTGAAGTTGCTGCTGCCA+AGG 0.539918 2_2:+54701588 Msa0258380:CDS
TGAAGAAGATGAAGATGATG+AGG 0.540232 2_2:+54704009 Msa0258380:CDS
GGTTTCTGATTCTGCGTCGG+AGG 0.541799 2_2:-54697205 None:intergenic
CAGATATACATACTTGGACC+CGG 0.543991 2_2:-54700343 None:intergenic
ATGTTATTGAAGAATTGGAT+AGG 0.546328 2_2:+54697658 Msa0258380:CDS
CACCAGTATTCCAACTCAGC+TGG 0.548245 2_2:-54702988 None:intergenic
GGTGTTTATACTTCTCCAGA+TGG 0.549999 2_2:+54698803 Msa0258380:CDS
TTGGGTTTCTGATTCTGCGT+CGG 0.552974 2_2:-54697208 None:intergenic
ATGAAGCATGGGAGGATGCA+TGG 0.553835 2_2:+54700764 Msa0258380:CDS
CTGTTATAGAACCTGTTCCC+GGG 0.558902 2_2:+54700325 Msa0258380:CDS
TGCTTACTTGTATGAAGGAG+AGG 0.559972 2_2:+54702744 Msa0258380:CDS
GAGTCGGAGTCGGAATCGGA+GGG 0.563257 2_2:-54697180 None:intergenic
TGAATTTGTCCTGCTTAACA+AGG 0.563327 2_2:+54703469 Msa0258380:CDS
AGTGTGACACATATGACAAA+TGG 0.568279 2_2:+54705653 Msa0258380:three_prime_UTR
AACAAGGTTGGATCAAAACC+AGG 0.568503 2_2:+54705060 Msa0258380:CDS
TTCCAATTCTCATCATCAGG+TGG 0.569444 2_2:-54697423 None:intergenic
CAATAACACCATGACCCTCT+GGG 0.570495 2_2:-54700290 None:intergenic
TTCTGCGTCGGAGGATGAGT+CGG 0.571987 2_2:-54697196 None:intergenic
GAGGATGTGTGGATGGCACC+TGG 0.574763 2_2:+54702763 Msa0258380:CDS
TTCAGGTGGGAGATTTCTTG+AGG 0.575981 2_2:+54705221 Msa0258380:CDS
AGAAATATTGGATGATGATG+AGG 0.576592 2_2:+54701426 Msa0258380:CDS
GAAATATTGGATGATGATGA+GGG 0.577055 2_2:+54701427 Msa0258380:CDS
TATTCCAACTCAGCTGGCAT+AGG 0.578083 2_2:-54702982 None:intergenic
TTGGAATACTGGTGGTCCAA+AGG 0.580088 2_2:+54702997 Msa0258380:CDS
ATCAAAGACAGATCAGCAGA+AGG 0.580464 2_2:+54704081 Msa0258380:CDS
AAGCTTAAGACGCTCCCATA+CGG 0.582795 2_2:-54703720 None:intergenic
TATGCTGGTCAGATGAAGCA+TGG 0.583444 2_2:+54700752 Msa0258380:CDS
CGAAACGACCCAGAGGGTCA+TGG 0.583757 2_2:+54700282 Msa0258380:CDS
TTGTTCTGGGTCGAATTCGG+AGG 0.585869 2_2:-54697298 None:intergenic
ATGTGATCAATGTGTTGCGC+AGG 0.586670 2_2:-54705090 None:intergenic
TGTATGAAGGAGAGGATGTG+TGG 0.586754 2_2:+54702752 Msa0258380:CDS
GATCAGCAGAAGGGAAAACC+CGG 0.587447 2_2:+54704091 Msa0258380:CDS
CTGTGATTGGCCAAAAGGGT+AGG 0.593200 2_2:+54705151 Msa0258380:CDS
TTTCCTAGGTTATCAAACCA+TGG 0.593326 2_2:-54703764 None:intergenic
GAGTCAAGAAGTTATTCAGG+TGG 0.594211 2_2:+54705207 Msa0258380:CDS
TTGCCAGATGAAGATGATAC+CGG 0.595416 2_2:+54703950 Msa0258380:CDS
CATGGGAGGATGCATGGATG+TGG 0.599968 2_2:+54700770 Msa0258380:CDS
TAACTCTTCCATGTCCCCAA+TGG 0.600348 2_2:-54703882 None:intergenic
TGAAGTCCCCTATTATGAGA+GGG 0.600859 2_2:+54700568 Msa0258380:CDS
AGATATACATACTTGGACCC+GGG 0.601167 2_2:-54700342 None:intergenic
GTCCCAACCAGTACCAGTAA+TGG 0.601866 2_2:-54697487 None:intergenic
TCAAAGACAGATCAGCAGAA+GGG 0.602574 2_2:+54704082 Msa0258380:CDS
AAGAAGCAATGCGAGCTGAA+GGG 0.605218 2_2:+54700453 Msa0258380:CDS
AGTCAAGAAGTTATTCAGGT+GGG 0.607587 2_2:+54705208 Msa0258380:CDS
TAATTGATGATAAATCCGGT+TGG 0.607681 2_2:-54703560 None:intergenic
TCAATAGACCCAAAACTCGA+TGG 0.608158 2_2:-54704052 None:intergenic
TCAAAAGAGCGAAGAATGAG+TGG 0.612655 2_2:+54705294 Msa0258380:CDS
AGCTGGCATAGGTATCCTAA+GGG 0.613587 2_2:-54702971 None:intergenic
TTCTAGCAGCCTTATCTCTG+CGG 0.613883 2_2:+54704150 Msa0258380:CDS
GGCTGCATGCGGCACCAGAG+AGG 0.614419 2_2:+54705325 Msa0258380:CDS
GTCGGAGGATGAGTCGGAGT+CGG 0.616817 2_2:-54697190 None:intergenic
ATTTATCATCAATTATGTCG+AGG 0.618144 2_2:+54703568 Msa0258380:CDS
ATGCTGGTCAGATGAAGCAT+GGG 0.619110 2_2:+54700753 Msa0258380:CDS
TCCTTCGTGTCTCTATGCCG+AGG 0.619254 2_2:-54705505 None:intergenic
TGGCAACATGTGGCTGCATG+CGG 0.619737 2_2:+54705314 Msa0258380:CDS
TGTTGCGCAGGAACTAACCC+TGG 0.620055 2_2:-54705078 None:intergenic
GAATGATTAGTAGGTACAGG+AGG 0.622571 2_2:-54697615 None:intergenic
AGTCATCATAACCATCGGGT+AGG 0.627073 2_2:-54703670 None:intergenic
TAGATCAGGAAAGAGAAATG+TGG 0.627095 2_2:+54702926 Msa0258380:CDS
ATGTTTGTGAACAAGCCAGA+TGG 0.628868 2_2:+54701616 Msa0258380:CDS
TGTCAATTTCAGCTGCACGC+TGG 0.629404 2_2:+54701562 Msa0258380:intron
GTTGGAGTGTGAAGGATGAG+AGG 0.631119 2_2:-54703542 None:intergenic
ATTCATCCCTCTCATAATAG+GGG 0.633266 2_2:-54700574 None:intergenic
TGAAGGAGAGGATGTGTGGA+TGG 0.635250 2_2:+54702756 Msa0258380:CDS
TCATACAAGTAAGCATGCTG+TGG 0.635472 2_2:-54702736 None:intergenic
ATGTTTGGAAGAGGCCATTG+GGG 0.639745 2_2:+54703868 Msa0258380:CDS
AAGCCATTCTCTCTCTTCTG+GGG 0.643213 2_2:-54700501 None:intergenic
CGGTCGAGTCTGAGACATAG+AGG 0.649168 2_2:-54705247 None:intergenic
AAGGGTAGGCTGAAAGCCGT+CGG 0.650840 2_2:+54705165 Msa0258380:CDS
AGGAATGGGAATATGTGAAG+TGG 0.653783 2_2:+54697529 Msa0258380:CDS
GCCTCGGCATAGAGACACGA+AGG 0.653928 2_2:+54705504 Msa0258380:three_prime_UTR
AAGGCTATATTCCTACCCGA+TGG 0.656178 2_2:+54703659 Msa0258380:CDS
CCTCAGGCGTAGCAAAAGCA+GGG 0.658702 2_2:-54697509 None:intergenic
CTGGTCAGATGAAGCATGGG+AGG 0.660225 2_2:+54700756 Msa0258380:CDS
AAGCCATGGTTTGATAACCT+AGG 0.662376 2_2:+54703761 Msa0258380:CDS
AGTCGGAGTCGGAATCGGAG+GGG 0.663708 2_2:-54697179 None:intergenic
TTAAGCAGGACAAATTCAGG+AGG 0.663739 2_2:-54703464 None:intergenic
TGGTTTCGAAACGACCCAGA+GGG 0.666508 2_2:+54700276 Msa0258380:CDS
TAAATCCGGTTGGAGTGTGA+AGG 0.671748 2_2:-54703550 None:intergenic
GTCAAAACTCATATATACTG+AGG 0.684772 2_2:+54703517 Msa0258380:CDS
GAAGAATGAGTGGCAACATG+TGG 0.687291 2_2:+54705304 Msa0258380:CDS
ATGTGATGACCAAACTTCAG+CGG 0.697886 2_2:+54701450 Msa0258380:CDS
TGAGATAAGATTCGACATCG+AGG 0.702508 2_2:-54697236 None:intergenic
CAGCTGAGTTGGAATACTGG+TGG 0.706946 2_2:+54702989 Msa0258380:CDS
ACAAGGTTGGATCAAAACCA+GGG 0.708459 2_2:+54705061 Msa0258380:CDS
ATGGTTTCGAAACGACCCAG+AGG 0.719076 2_2:+54700275 Msa0258380:CDS
GCTGGCATAGGTATCCTAAG+GGG 0.735218 2_2:-54702970 None:intergenic
GCAGTGGTTAGAGAAAAGAG+AGG 0.769842 2_2:+54702700 Msa0258380:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTACCTTTTATTAAAATAA+TGG - chr2_2:54699020-54699039 None:intergenic 10.0%
!!! CTTTTCAAATTTATAAAAAA+AGG + chr2_2:54700882-54700901 Msa0258380:intron 10.0%
!! TTTCAAATTTATAAAAAAAG+GGG + chr2_2:54700884-54700903 Msa0258380:intron 10.0%
!!! ACTTTTTTAAGATAAAAATA+AGG + chr2_2:54700920-54700939 Msa0258380:intron 10.0%
!! TAATAAATATAAAAGAAAAG+AGG - chr2_2:54701370-54701389 None:intergenic 10.0%
!!! GATTTTAATATTCAATAATT+TGG - chr2_2:54703312-54703331 None:intergenic 10.0%
!! TAGATAAATTATTTACTTAG+CGG - chr2_2:54697005-54697024 None:intergenic 15.0%
!! TTAACAACTTACTATAAATT+TGG - chr2_2:54698293-54698312 None:intergenic 15.0%
!! AGATTATAAATATTTCGAAA+AGG - chr2_2:54698384-54698403 None:intergenic 15.0%
!! TTCGAAATATTTATAATCTT+AGG + chr2_2:54698385-54698404 Msa0258380:intron 15.0%
!! TCGAAATATTTATAATCTTA+GGG + chr2_2:54698386-54698405 Msa0258380:intron 15.0%
!!! TAAGCCATTATTTTAATAAA+AGG + chr2_2:54699013-54699032 Msa0258380:intron 15.0%
!!! ATATACTAATATACATGTTT+TGG + chr2_2:54699887-54699906 Msa0258380:intron 15.0%
!! TTCAAATTTATAAAAAAAGG+GGG + chr2_2:54700885-54700904 Msa0258380:intron 15.0%
!!! TAGTTTAAAAGTTTTTTACA+CGG + chr2_2:54700963-54700982 Msa0258380:intron 15.0%
!!! TTTGAGTTAAAAATGTATAA+AGG - chr2_2:54701206-54701225 None:intergenic 15.0%
!!! ATTTTATTTTGGAGAAATAT+TGG + chr2_2:54701414-54701433 Msa0258380:CDS 15.0%
!! AATAATATTAGTAATTTGAG+AGG + chr2_2:54701505-54701524 Msa0258380:intron 15.0%
!! TATATTTATTCAATACCAAT+TGG + chr2_2:54702282-54702301 Msa0258380:intron 15.0%
!!! TATATACAAACCTTTATTTT+CGG + chr2_2:54702309-54702328 Msa0258380:intron 15.0%
!! AAAAAAAAACTGTAACAAAT+GGG - chr2_2:54703032-54703051 None:intergenic 15.0%
!! AAAAAAAAAACTGTAACAAA+TGG - chr2_2:54703033-54703052 None:intergenic 15.0%
!!! TGTTACAGTTTTTTTTTTTT+TGG + chr2_2:54703035-54703054 Msa0258380:intron 15.0%
!!! TATCAAAAATGATTTTTAAC+AGG - chr2_2:54703194-54703213 None:intergenic 15.0%
!!! TTAAAAAGTGATTTTCATTA+TGG + chr2_2:54703229-54703248 Msa0258380:intron 15.0%
!! TCAAAGAATAATACAAAAAT+TGG - chr2_2:54704246-54704265 None:intergenic 15.0%
!! AAATTGACATACAAAATAAT+TGG + chr2_2:54704430-54704449 Msa0258380:intron 15.0%
!! CTACATTAATTAAACTTGAA+TGG + chr2_2:54697022-54697041 Msa0258380:five_prime_UTR 20.0%
!!! GTAGTATTTTTGAACTTTTT+CGG - chr2_2:54697355-54697374 None:intergenic 20.0%
!! AATTCTTCAATAACATCTTT+AGG - chr2_2:54697654-54697673 None:intergenic 20.0%
!! TAAAGATGTTATTGAAGAAT+TGG + chr2_2:54697653-54697672 Msa0258380:CDS 20.0%
!! AACACAATATTTATCTATGT+AGG + chr2_2:54698102-54698121 Msa0258380:intron 20.0%
!! ACACAATATTTATCTATGTA+GGG + chr2_2:54698103-54698122 Msa0258380:intron 20.0%
!! GATTATGAATACTTCATAAA+TGG + chr2_2:54698182-54698201 Msa0258380:intron 20.0%
!! TAGTAAGTTGTTAAAATACA+AGG + chr2_2:54698299-54698318 Msa0258380:intron 20.0%
!! TTAAGCAAATAGTTATTGTT+CGG + chr2_2:54698517-54698536 Msa0258380:intron 20.0%
!!! AATAGGCATTTGTTTTTAAA+GGG - chr2_2:54698671-54698690 None:intergenic 20.0%
!!! AAATAGGCATTTGTTTTTAA+AGG - chr2_2:54698672-54698691 None:intergenic 20.0%
!!! TGCTAAATTTTTAGATATGA+AGG + chr2_2:54698749-54698768 Msa0258380:intron 20.0%
!! AATAAGCTGAAAACAATTTA+TGG + chr2_2:54699084-54699103 Msa0258380:intron 20.0%
!! ATTACTTGGAAATTTGATAT+AGG + chr2_2:54699525-54699544 Msa0258380:intron 20.0%
!!! AACTTTGATGATGATATATT+TGG + chr2_2:54699672-54699691 Msa0258380:intron 20.0%
!!! ACTTTGATGATGATATATTT+GGG + chr2_2:54699673-54699692 Msa0258380:intron 20.0%
!! CAGTAAATTAATTATGCTTA+TGG + chr2_2:54701177-54701196 Msa0258380:intron 20.0%
!! GAATGAAATATAAGCAAAAA+AGG - chr2_2:54701871-54701890 None:intergenic 20.0%
!!! TTTTTGCTTATATTTCATTC+CGG + chr2_2:54701871-54701890 Msa0258380:intron 20.0%
!!! TTGGTATTGATATGTTTAAA+TGG - chr2_2:54701953-54701972 None:intergenic 20.0%
!! AGAAAACATAAAACCAAAAA+GGG - chr2_2:54702254-54702273 None:intergenic 20.0%
!!! ATATACAAACCTTTATTTTC+GGG + chr2_2:54702310-54702329 Msa0258380:intron 20.0%
!!! TTAATATGCATGTTGATTAT+TGG + chr2_2:54702559-54702578 Msa0258380:intron 20.0%
!! TAACAAGATTAAAAACAGTA+TGG - chr2_2:54702649-54702668 None:intergenic 20.0%
!!! TTAACCAATTTTATGAAGTA+AGG + chr2_2:54702791-54702810 Msa0258380:intron 20.0%
!!! TTTTGAAAATCTGTAACAAA+CGG - chr2_2:54703113-54703132 None:intergenic 20.0%
!! GAAAATTAGTGAAATGAAAA+AGG + chr2_2:54703805-54703824 Msa0258380:CDS 20.0%
!! ACAAAACATATATACACTAA+AGG - chr2_2:54704810-54704829 None:intergenic 20.0%
!!! AATATTTTATCGTTGTCATT+TGG + chr2_2:54704993-54705012 Msa0258380:intron 20.0%
!!! ATGCATAATGCATTATTTTT+TGG + chr2_2:54705589-54705608 Msa0258380:three_prime_UTR 20.0%
! TTATTTACTTAGCGGTAAAT+AGG - chr2_2:54696997-54697016 None:intergenic 25.0%
! TAATTAAACTTGAATGGAAC+TGG + chr2_2:54697028-54697047 Msa0258380:five_prime_UTR 25.0%
! TTCCTATAAGGAAGATAAAA+AGG - chr2_2:54697588-54697607 None:intergenic 25.0%
! TTAATAGCAGAATGATTAGT+AGG - chr2_2:54697627-54697646 None:intergenic 25.0%
! ACTAATCATTCTGCTATTAA+AGG + chr2_2:54697627-54697646 Msa0258380:CDS 25.0%
! ATGTTATTGAAGAATTGGAT+AGG + chr2_2:54697658-54697677 Msa0258380:CDS 25.0%
! TAACAACTAAGTTGTACTTA+CGG - chr2_2:54697805-54697824 None:intergenic 25.0%
! CATAGATAAATATTGTGTTC+TGG - chr2_2:54698101-54698120 None:intergenic 25.0%
! TTAACCACTCATTATCAATT+AGG - chr2_2:54698326-54698345 None:intergenic 25.0%
!! TACAAAATAAGAGACTAGTT+TGG + chr2_2:54698427-54698446 Msa0258380:intron 25.0%
! TTTAGTACAATATTGTCGAA+TGG + chr2_2:54698550-54698569 Msa0258380:intron 25.0%
! TGCATAGAAGAATTTAAACA+AGG + chr2_2:54698590-54698609 Msa0258380:intron 25.0%
! GCATAGAAGAATTTAAACAA+GGG + chr2_2:54698591-54698610 Msa0258380:intron 25.0%
!!! TTGTTTTTGCTACATTGTTT+TGG + chr2_2:54698837-54698856 Msa0258380:intron 25.0%
!! TAGTTATGCTTAAATGGTTT+TGG + chr2_2:54698877-54698896 Msa0258380:intron 25.0%
! ATACAAGTTTAGTTAAACAC+AGG + chr2_2:54699388-54699407 Msa0258380:intron 25.0%
!!! TACTAATATACATGTTTTGG+TGG + chr2_2:54699890-54699909 Msa0258380:intron 25.0%
!!! ACTAATATACATGTTTTGGT+GGG + chr2_2:54699891-54699910 Msa0258380:intron 25.0%
!!! AAGTTCTGTCACTTTTTTTT+GGG - chr2_2:54700022-54700041 None:intergenic 25.0%
!! CAGTGTATTTTCTATATCAT+AGG + chr2_2:54700241-54700260 Msa0258380:intron 25.0%
! TTTCTATATCATAGGTATGA+AGG + chr2_2:54700249-54700268 Msa0258380:intron 25.0%
!! TTGAACACAATTTTAAACTG+TGG - chr2_2:54700384-54700403 None:intergenic 25.0%
! TGAAGGGAAGATAATAAAAA+GGG + chr2_2:54700469-54700488 Msa0258380:CDS 25.0%
! AGAATCAAGAATTGAACTTA+CGG - chr2_2:54700623-54700642 None:intergenic 25.0%
!! TGAAAAAAACTGTATTTTCG+TGG + chr2_2:54700706-54700725 Msa0258380:intron 25.0%
! TTGAAAAGTAAGTTGTTGAT+TGG - chr2_2:54700870-54700889 None:intergenic 25.0%
!! CTTTTGCTTATATTTCATTC+CGG - chr2_2:54701784-54701803 None:intergenic 25.0%
! ATATGATGTAAAGTTCCAAT+TGG - chr2_2:54702042-54702061 None:intergenic 25.0%
!! TTTATTGATAACACTCGATA+TGG + chr2_2:54702061-54702080 Msa0258380:intron 25.0%
! CAGAAAACATAAAACCAAAA+AGG - chr2_2:54702255-54702274 None:intergenic 25.0%
!!! TTGGTTTTATGTTTTCTGTT+AGG + chr2_2:54702257-54702276 Msa0258380:intron 25.0%
! GTTTGTATATAATTGCCAAT+TGG - chr2_2:54702300-54702319 None:intergenic 25.0%
!!! ATTCCACTATAATTGTTTTG+AGG + chr2_2:54702427-54702446 Msa0258380:intron 25.0%
! TGAACCTTACTTCATAAAAT+TGG - chr2_2:54702798-54702817 None:intergenic 25.0%
!!! GCTTATTTTCATTTTATGCA+AGG + chr2_2:54702839-54702858 Msa0258380:intron 25.0%
!!! TCAGTATATATGAGTTTTGA+CGG - chr2_2:54703518-54703537 None:intergenic 25.0%
!! GACATAATTGATGATAAATC+CGG - chr2_2:54703567-54703586 None:intergenic 25.0%
! ATTTATCATCAATTATGTCG+AGG + chr2_2:54703568-54703587 Msa0258380:CDS 25.0%
! AAAAAAGTCATCATAACCAT+CGG - chr2_2:54703678-54703697 None:intergenic 25.0%
!!! ATGGTTATGATGACTTTTTT+GGG + chr2_2:54703678-54703697 Msa0258380:CDS 25.0%
! AATTAGTGAAATGAAAAAGG+AGG + chr2_2:54703808-54703827 Msa0258380:CDS 25.0%
! AACTTTATAAAACTGCTCAA+TGG - chr2_2:54704205-54704224 None:intergenic 25.0%
!!! TTTTTTACAAGTTAGCTTAC+AGG + chr2_2:54704284-54704303 Msa0258380:intron 25.0%
! GGTTAATTACATTCAATGAA+TGG - chr2_2:54704532-54704551 None:intergenic 25.0%
!!! CAACTCTAAAGTTGAAATTA+GGG + chr2_2:54704739-54704758 Msa0258380:intron 25.0%
!! AGTGTATATATGTTTTGTGA+AGG + chr2_2:54704812-54704831 Msa0258380:intron 25.0%
! TTGTGTATAACTGTATATCT+CGG + chr2_2:54704854-54704873 Msa0258380:intron 25.0%
! CAATTCTACATATTGAAATG+AGG - chr2_2:54704940-54704959 None:intergenic 25.0%
!! ACTTCAAATTTAAGCTTTGA+AGG + chr2_2:54705424-54705443 Msa0258380:CDS 25.0%
! AAATAATGCATTATGCATAC+AGG - chr2_2:54705587-54705606 None:intergenic 25.0%
!!! CATTTTAAAGTTGTGCAAAA+AGG - chr2_2:54705626-54705645 None:intergenic 25.0%
AACATTGTTGAAGATAAGGT+TGG - chr2_2:54697111-54697130 None:intergenic 30.0%
GAGAAACATTGTTGAAGATA+AGG - chr2_2:54697115-54697134 None:intergenic 30.0%
!!! CTTCTTTGAAGTTTTGTTCT+GGG - chr2_2:54697314-54697333 None:intergenic 30.0%
!!! ACTTCTTTGAAGTTTTGTTC+TGG - chr2_2:54697315-54697334 None:intergenic 30.0%
! CTCCTTTTTATCTTCCTTAT+AGG + chr2_2:54697583-54697602 Msa0258380:CDS 30.0%
GATTGAAGAGTTTCTCAAAT+GGG + chr2_2:54697680-54697699 Msa0258380:CDS 30.0%
AACAACTAAGTTGTACTTAC+GGG - chr2_2:54697804-54697823 None:intergenic 30.0%
! TCTCTCTCTCATCTTATTTA+TGG - chr2_2:54697999-54698018 None:intergenic 30.0%
CAATATTTATCTATGTAGGG+CGG + chr2_2:54698106-54698125 Msa0258380:intron 30.0%
GCTCAAATAATAAACATGCT+TGG + chr2_2:54698128-54698147 Msa0258380:intron 30.0%
TGAGTAAAATTAACCAGAGT+CGG - chr2_2:54698209-54698228 None:intergenic 30.0%
! GAGACTAAATTGATAGTAAG+TGG + chr2_2:54698254-54698273 Msa0258380:intron 30.0%
!! AAAATAAGAGACTAGTTTGG+TGG + chr2_2:54698430-54698449 Msa0258380:intron 30.0%
ATAGTTATTGTTCGGCAATA+AGG + chr2_2:54698525-54698544 Msa0258380:intron 30.0%
TTAGATATGAAGGAACTCTT+TGG + chr2_2:54698759-54698778 Msa0258380:intron 30.0%
TAGATATGAAGGAACTCTTT+GGG + chr2_2:54698760-54698779 Msa0258380:intron 30.0%
TGCTGTTAGTTATGCTTAAA+TGG + chr2_2:54698871-54698890 Msa0258380:intron 30.0%
!!! TTATGCTTAAATGGTTTTGG+TGG + chr2_2:54698880-54698899 Msa0258380:intron 30.0%
AACAAGATAGAATGAGATAC+AGG + chr2_2:54698922-54698941 Msa0258380:intron 30.0%
AACGATCAGATTACTATCAA+TGG - chr2_2:54699277-54699296 None:intergenic 30.0%
AACTAAACTTGTATTGCCTA+CGG - chr2_2:54699382-54699401 None:intergenic 30.0%
CAAATTTCCAAGTAATGTGT+TGG - chr2_2:54699521-54699540 None:intergenic 30.0%
ACTTGGAAATTTGATATAGG+CGG + chr2_2:54699528-54699547 Msa0258380:intron 30.0%
GTAACTAAGTTTGTCAAAGT+AGG - chr2_2:54699618-54699637 None:intergenic 30.0%
TTGAGTATATTTGTCTCAGT+TGG + chr2_2:54699748-54699767 Msa0258380:intron 30.0%
TGAGTATATTTGTCTCAGTT+GGG + chr2_2:54699749-54699768 Msa0258380:intron 30.0%
!!! CTAATATACATGTTTTGGTG+GGG + chr2_2:54699892-54699911 Msa0258380:intron 30.0%
!!! TAATATACATGTTTTGGTGG+GGG + chr2_2:54699893-54699912 Msa0258380:intron 30.0%
!!! CAAGTTCTGTCACTTTTTTT+TGG - chr2_2:54700023-54700042 None:intergenic 30.0%
! TCTATTTGTCATGTTTTCTG+CGG + chr2_2:54700066-54700085 Msa0258380:intron 30.0%
CCATTATCAAACAAAGTCAA+AGG - chr2_2:54700112-54700131 None:intergenic 30.0%
! CCTTTGACTTTGTTTGATAA+TGG + chr2_2:54700109-54700128 Msa0258380:intron 30.0%
AGACTTCAGATATACATACT+TGG - chr2_2:54700352-54700371 None:intergenic 30.0%
CTGAAGGGAAGATAATAAAA+AGG + chr2_2:54700468-54700487 Msa0258380:CDS 30.0%
GATAGTTATCTTCTTGCAAA+TGG + chr2_2:54700539-54700558 Msa0258380:CDS 30.0%
AATGACCGTATCATATATGT+AGG + chr2_2:54700806-54700825 Msa0258380:intron 30.0%
ATGGACCTACATATATGATA+CGG - chr2_2:54700814-54700833 None:intergenic 30.0%
CATAAACTTTATCTACTCCA+TGG - chr2_2:54700833-54700852 None:intergenic 30.0%
ATTTATAAAAAAAGGGGGAG+AGG + chr2_2:54700890-54700909 Msa0258380:intron 30.0%
AAGGTTCAATCACATAAATC+AGG - chr2_2:54701259-54701278 None:intergenic 30.0%
AACCTTGCAACTAAATTCAA+AGG + chr2_2:54701273-54701292 Msa0258380:intron 30.0%
AACCTTTGAATTTAGTTGCA+AGG - chr2_2:54701278-54701297 None:intergenic 30.0%
TGCAACTAAATTCAAAGGTT+AGG + chr2_2:54701278-54701297 Msa0258380:intron 30.0%
ATCTTACTTGACTCACATAT+AGG + chr2_2:54701341-54701360 Msa0258380:intron 30.0%
AAAATAAAATCTACCCTGCA+TGG - chr2_2:54701404-54701423 None:intergenic 30.0%
!! ATGCAGGGTAGATTTTATTT+TGG + chr2_2:54701403-54701422 Msa0258380:intron 30.0%
! AGAAATATTGGATGATGATG+AGG + chr2_2:54701426-54701445 Msa0258380:CDS 30.0%
! GAAATATTGGATGATGATGA+GGG + chr2_2:54701427-54701446 Msa0258380:CDS 30.0%
TATTTAATACCGCTGAAGTT+TGG - chr2_2:54701462-54701481 None:intergenic 30.0%
TATTAGTAATTTGAGAGGTG+TGG + chr2_2:54701510-54701529 Msa0258380:intron 30.0%
AAAACAAAACCATGAATACG+AGG - chr2_2:54701682-54701701 None:intergenic 30.0%
!!! CGTATTCATGGTTTTGTTTT+TGG + chr2_2:54701682-54701701 Msa0258380:intron 30.0%
AGTTGAAAAGTCAATGTATG+TGG + chr2_2:54701808-54701827 Msa0258380:intron 30.0%
GATATGTTTAAATGGCAAGA+AGG - chr2_2:54701945-54701964 None:intergenic 30.0%
GTCATGATATAAAGACCAAT+TGG + chr2_2:54702024-54702043 Msa0258380:intron 30.0%
! TAGTCCTTTTCATTACTCTT+GGG + chr2_2:54702186-54702205 Msa0258380:intron 30.0%
AAAACCCAAGAGTAATGAAA+AGG - chr2_2:54702193-54702212 None:intergenic 30.0%
AAGAAGAAACCCGAAAATAA+AGG - chr2_2:54702322-54702341 None:intergenic 30.0%
TTGTTGAGATGATTGTCAAA+GGG - chr2_2:54702528-54702547 None:intergenic 30.0%
ATTGTTGAGATGATTGTCAA+AGG - chr2_2:54702529-54702548 None:intergenic 30.0%
ATCATCTCAACAATTGATGA+TGG + chr2_2:54702535-54702554 Msa0258380:intron 30.0%
TAAAATTGGTTAATGAAGCC+AGG - chr2_2:54702784-54702803 None:intergenic 30.0%
ACAGAAAAAGAGAAAGACTA+AGG - chr2_2:54703363-54703382 None:intergenic 30.0%
! CTTTTTCTGTATGAACAAGT+AGG + chr2_2:54703373-54703392 Msa0258380:intron 30.0%
!! CAGTATATATGAGTTTTGAC+GGG - chr2_2:54703517-54703536 None:intergenic 30.0%
GTCAAAACTCATATATACTG+AGG + chr2_2:54703517-54703536 Msa0258380:CDS 30.0%
! TAATTGATGATAAATCCGGT+TGG - chr2_2:54703563-54703582 None:intergenic 30.0%
AATATGGAATACGTATGTTC+TGG + chr2_2:54703597-54703616 Msa0258380:CDS 30.0%
! GTAGGAATATAGCCTTTTTA+GGG - chr2_2:54703655-54703674 None:intergenic 30.0%
AAAAAGTCATCATAACCATC+GGG - chr2_2:54703677-54703696 None:intergenic 30.0%
!!! GATGGTTATGATGACTTTTT+TGG + chr2_2:54703677-54703696 Msa0258380:CDS 30.0%
ATAAGAACAAAAAGACCGTA+TGG + chr2_2:54703705-54703724 Msa0258380:CDS 30.0%
TAAGAACAAAAAGACCGTAT+GGG + chr2_2:54703706-54703725 Msa0258380:CDS 30.0%
! GTTTGATAACCTAGGAAAAT+GGG + chr2_2:54703769-54703788 Msa0258380:CDS 30.0%
GATAGAAGCTGAATTATGTT+TGG + chr2_2:54703853-54703872 Msa0258380:CDS 30.0%
!! CAGATTTTAAGAATCACATG+AGG + chr2_2:54704361-54704380 Msa0258380:intron 30.0%
ATGATACTTTGACACAAGAA+TGG - chr2_2:54704688-54704707 None:intergenic 30.0%
!! CCTAATTTCAACTTTAGAGT+TGG - chr2_2:54704741-54704760 None:intergenic 30.0%
!! CCAACTCTAAAGTTGAAATT+AGG + chr2_2:54704738-54704757 Msa0258380:intron 30.0%
TATTGAAATGAGGTGCAATT+AGG - chr2_2:54704930-54704949 None:intergenic 30.0%
AGAATTGAAACTGTTTGAGT+TGG + chr2_2:54704953-54704972 Msa0258380:intron 30.0%
!!! CTTTTTGAAGTCGTATAACA+CGG - chr2_2:54705270-54705289 None:intergenic 30.0%
! CAAAGCTTAAATTTGAAGTG+AGG - chr2_2:54705423-54705442 None:intergenic 30.0%
!!! ACTCATTTTTTGGTACACAA+GGG - chr2_2:54705471-54705490 None:intergenic 30.0%
!! ATAAGGTTGGTTGTTGTTTG+CGG - chr2_2:54697098-54697117 None:intergenic 35.0%
TCATCAGGTGGAAAATCAAA+CGG - chr2_2:54697414-54697433 None:intergenic 35.0%
TCTTTCCAATTCTCATCATC+AGG - chr2_2:54697429-54697448 None:intergenic 35.0%
AAGAAGATTTGAGAGAGCTT+TGG + chr2_2:54697448-54697467 Msa0258380:CDS 35.0%
AGAAGATTTGAGAGAGCTTT+GGG + chr2_2:54697449-54697468 Msa0258380:CDS 35.0%
AATGGGAATAACACCATTAC+TGG + chr2_2:54697474-54697493 Msa0258380:CDS 35.0%
AATAACACCATTACTGGTAC+TGG + chr2_2:54697480-54697499 Msa0258380:CDS 35.0%
!! TGTGAAGTGGAAGCATTATA+AGG + chr2_2:54697542-54697561 Msa0258380:CDS 35.0%
!! GTGAAGTGGAAGCATTATAA+GGG + chr2_2:54697543-54697562 Msa0258380:CDS 35.0%
GGAAGATAAAAAGGAGCAAT+AGG - chr2_2:54697579-54697598 None:intergenic 35.0%
GGATTGAAGAGTTTCTCAAA+TGG + chr2_2:54697679-54697698 Msa0258380:CDS 35.0%
!! GTTAGCTACGTTTTTGAAGA+TGG + chr2_2:54697702-54697721 Msa0258380:CDS 35.0%
! TAGCTGCATTGACGTTAATA+TGG + chr2_2:54697823-54697842 Msa0258380:intron 35.0%
! TGCATTGACGTTAATATGGA+TGG + chr2_2:54697827-54697846 Msa0258380:intron 35.0%
! GCATTGACGTTAATATGGAT+GGG + chr2_2:54697828-54697847 Msa0258380:intron 35.0%
GAGAATCACATGTTCAATCT+CGG - chr2_2:54697864-54697883 None:intergenic 35.0%
TCTCTACTTCTCCACATTTA+AGG + chr2_2:54697880-54697899 Msa0258380:intron 35.0%
!! GAGATTCACTGACTTTAAGA+CGG + chr2_2:54697920-54697939 Msa0258380:intron 35.0%
!! AGATTCACTGACTTTAAGAC+GGG + chr2_2:54697921-54697940 Msa0258380:intron 35.0%
TAGTGGCTATACTCACAAAT+TGG - chr2_2:54698068-54698087 None:intergenic 35.0%
GTTCTGGTCAAATAATCTAG+TGG - chr2_2:54698085-54698104 None:intergenic 35.0%
!! ATAAACATGCTTGGCTTTGT+AGG + chr2_2:54698137-54698156 Msa0258380:intron 35.0%
!! TAAACATGCTTGGCTTTGTA+GGG + chr2_2:54698138-54698157 Msa0258380:intron 35.0%
!! TTTGTAGGGTGCTCTAAAAT+AGG + chr2_2:54698152-54698171 Msa0258380:intron 35.0%
GAGTAAAATTAACCAGAGTC+GGG - chr2_2:54698208-54698227 None:intergenic 35.0%
!! AGGACCTAATTGATAATGAG+TGG + chr2_2:54698319-54698338 Msa0258380:intron 35.0%
TTGACAGCTTGATAGAGATA+AGG + chr2_2:54698357-54698376 Msa0258380:intron 35.0%
!! TGTTCAGTGTTGGTAAATAG+AGG + chr2_2:54698477-54698496 Msa0258380:intron 35.0%
AGTACAATATTGTCGAATGG+TGG + chr2_2:54698553-54698572 Msa0258380:intron 35.0%
! AACAAATGCCTATTTTGTGC+CGG + chr2_2:54698677-54698696 Msa0258380:intron 35.0%
GATGATATTGCTCAAGGAAA+AGG + chr2_2:54698782-54698801 Msa0258380:CDS 35.0%
!!! TTAAATGGTTTTGGTGGTAG+TGG + chr2_2:54698886-54698905 Msa0258380:intron 35.0%
AGACAATTACGGTACTGTTT+GGG - chr2_2:54699139-54699158 None:intergenic 35.0%
!!! CTTTTAGGATGTTACGACAA+TGG + chr2_2:54699182-54699201 Msa0258380:intron 35.0%
AATCGTGAATGTATTTCCGT+AGG + chr2_2:54699212-54699231 Msa0258380:intron 35.0%
ATCGTGAATGTATTTCCGTA+GGG + chr2_2:54699213-54699232 Msa0258380:intron 35.0%
TAGTTAAACACAGGACTGAT+AGG + chr2_2:54699397-54699416 Msa0258380:intron 35.0%
AGTTAAACACAGGACTGATA+GGG + chr2_2:54699398-54699417 Msa0258380:intron 35.0%
GACATAGCATATGTACTATC+AGG - chr2_2:54699451-54699470 None:intergenic 35.0%
GACAAACTTAGTTACAGAGA+AGG + chr2_2:54699623-54699642 Msa0258380:intron 35.0%
AAACTTAGTTACAGAGAAGG+AGG + chr2_2:54699626-54699645 Msa0258380:intron 35.0%
!!! AATATACATGTTTTGGTGGG+GGG + chr2_2:54699894-54699913 Msa0258380:intron 35.0%
GGATAACACTTCGTATTCAA+TGG - chr2_2:54699985-54700004 None:intergenic 35.0%
! ATACGAAGTGTTATCCAAGT+TGG + chr2_2:54699989-54700008 Msa0258380:intron 35.0%
GAAGCTAATACATCTAATGC+AGG - chr2_2:54700165-54700184 None:intergenic 35.0%
ATCATAGGTATGAAGGTGAA+TGG + chr2_2:54700256-54700275 Msa0258380:intron 35.0%
ATTCATCCCTCTCATAATAG+GGG - chr2_2:54700577-54700596 None:intergenic 35.0%
CATTCATCCCTCTCATAATA+GGG - chr2_2:54700578-54700597 None:intergenic 35.0%
CTATTATGAGAGGGATGAAT+GGG + chr2_2:54700577-54700596 Msa0258380:CDS 35.0%
! ATGCTGCATTGTCTCTATTT+TGG + chr2_2:54700656-54700675 Msa0258380:intron 35.0%
GTATCATATATGTAGGTCCA+TGG + chr2_2:54700813-54700832 Msa0258380:intron 35.0%
GTTCAATCACATAAATCAGG+TGG - chr2_2:54701256-54701275 None:intergenic 35.0%
ATGCTAGTCATCTCAACATA+AGG + chr2_2:54701303-54701322 Msa0258380:intron 35.0%
TGCTAGTCATCTCAACATAA+GGG + chr2_2:54701304-54701323 Msa0258380:intron 35.0%
CTAAACATCATACTTCCATC+TGG - chr2_2:54701634-54701653 None:intergenic 35.0%
AATTGAAAGCCTCGTATTCA+TGG + chr2_2:54701670-54701689 Msa0258380:intron 35.0%
GTAACATGTGTGCTAATGAA+TGG - chr2_2:54701739-54701758 None:intergenic 35.0%
TGCTTATATTTCATTCCGGA+GGG - chr2_2:54701875-54701894 None:intergenic 35.0%
TTGCTTATATTTCATTCCGG+AGG - chr2_2:54701874-54701893 None:intergenic 35.0%
TGCTTATATTTCATTCCGGA+TGG + chr2_2:54701875-54701894 Msa0258380:intron 35.0%
GGGTGTTCTTAAATCTTACT+TGG - chr2_2:54701972-54701991 None:intergenic 35.0%
CACAAATTGGAAAAGAACAC+TGG - chr2_2:54701999-54702018 None:intergenic 35.0%
! CAGTGTTCTTTTCCAATTTG+TGG + chr2_2:54701997-54702016 Msa0258380:intron 35.0%
ATCATGACTTAGCCACAAAT+TGG - chr2_2:54702012-54702031 None:intergenic 35.0%
AACATGCAGAACAAAGCAAT+TGG - chr2_2:54702152-54702171 None:intergenic 35.0%
! CTAGTCCTTTTCATTACTCT+TGG + chr2_2:54702185-54702204 Msa0258380:intron 35.0%
CGACCTCAAAACAATTATAG+TGG - chr2_2:54702433-54702452 None:intergenic 35.0%
ATGATTGTCAAAGGGTAAAG+AGG - chr2_2:54702520-54702539 None:intergenic 35.0%
! AAGATATTTTGTCTGTGCAG+TGG + chr2_2:54702684-54702703 Msa0258380:intron 35.0%
CATGCATATGATTCTGTTAC+AGG + chr2_2:54702870-54702889 Msa0258380:intron 35.0%
TAGATCAGGAAAGAGAAATG+TGG + chr2_2:54702926-54702945 Msa0258380:CDS 35.0%
!! AAATGGGCTCTAAATACCTT+TGG - chr2_2:54703016-54703035 None:intergenic 35.0%
! AGACTAAGGTCTGTTTGTTA+CGG - chr2_2:54703349-54703368 None:intergenic 35.0%
TTGTTAAGCAGGACAAATTC+AGG - chr2_2:54703470-54703489 None:intergenic 35.0%
TGAATTTGTCCTGCTTAACA+AGG + chr2_2:54703469-54703488 Msa0258380:CDS 35.0%
TATGTCGAGGATGAGAAATA+TGG + chr2_2:54703581-54703600 Msa0258380:CDS 35.0%
! ACTTTCTCACCTTTTTGCAA+AGG - chr2_2:54703629-54703648 None:intergenic 35.0%
TGAGAAAGTTGACCCTAAAA+AGG + chr2_2:54703640-54703659 Msa0258380:CDS 35.0%
! GGTAGGAATATAGCCTTTTT+AGG - chr2_2:54703656-54703675 None:intergenic 35.0%
TTTCCTAGGTTATCAAACCA+TGG - chr2_2:54703767-54703786 None:intergenic 35.0%
! GGTTTGATAACCTAGGAAAA+TGG + chr2_2:54703768-54703787 Msa0258380:CDS 35.0%
AGCTGAATTATGTTTGGAAG+AGG + chr2_2:54703859-54703878 Msa0258380:CDS 35.0%
AGAGAAAGAGGAGAAAAAGA+AGG + chr2_2:54703916-54703935 Msa0258380:CDS 35.0%
! ATCTTGTTTGACTACAGAAC+CGG - chr2_2:54703972-54703991 None:intergenic 35.0%
TTCATCTTCTTCATCTACAC+GGG - chr2_2:54704002-54704021 None:intergenic 35.0%
CTTCATCTTCTTCATCTACA+CGG - chr2_2:54704003-54704022 None:intergenic 35.0%
TGAAGAAGATGAAGATGATG+AGG + chr2_2:54704009-54704028 Msa0258380:CDS 35.0%
! ATATTGCACCATCGAGTTTT+GGG + chr2_2:54704044-54704063 Msa0258380:CDS 35.0%
GCTAGTGAAGTTGTAGAAAA+TGG - chr2_2:54704124-54704143 None:intergenic 35.0%
GTTAACGAACAACAAAGACA+TGG + chr2_2:54704452-54704471 Msa0258380:intron 35.0%
TTAACCACAAATTCGATCAG+TGG + chr2_2:54704546-54704565 Msa0258380:intron 35.0%
TTAACCACTGATCGAATTTG+TGG - chr2_2:54704553-54704572 None:intergenic 35.0%
! ATGACATATGTTTTGCTCCT+TGG - chr2_2:54704898-54704917 None:intergenic 35.0%
GAGCAAAACATATGTCATGT+TGG + chr2_2:54704900-54704919 Msa0258380:intron 35.0%
! AATGATTGTTGCAGCTTTGA+TGG - chr2_2:54705030-54705049 None:intergenic 35.0%
TGCAACAATCATTTCCATTC+TGG + chr2_2:54705037-54705056 Msa0258380:CDS 35.0%
!! ATCATTTCCATTCTGGAACA+AGG + chr2_2:54705044-54705063 Msa0258380:CDS 35.0%
! TTTTTCATGTGCTTTACCGA+CGG - chr2_2:54705184-54705203 None:intergenic 35.0%
GTTGAGTCAAGAAGTTATTC+AGG + chr2_2:54705204-54705223 Msa0258380:CDS 35.0%
AGTCAAGAAGTTATTCAGGT+GGG + chr2_2:54705208-54705227 Msa0258380:CDS 35.0%
! ATTTGAAGTGAGGTTCTCTT+TGG - chr2_2:54705413-54705432 None:intergenic 35.0%
!!! GGCCATTTTTATTCTTAGCT+AGG + chr2_2:54705445-54705464 Msa0258380:three_prime_UTR 35.0%
GGCCTAGCTAAGAATAAAAA+TGG - chr2_2:54705450-54705469 None:intergenic 35.0%
!!! CACTCATTTTTTGGTACACA+AGG - chr2_2:54705472-54705491 None:intergenic 35.0%
ACCAAAAAATGAGTGAGCAT+AGG + chr2_2:54705477-54705496 Msa0258380:three_prime_UTR 35.0%
!!! ACCTATGCTCACTCATTTTT+TGG - chr2_2:54705481-54705500 None:intergenic 35.0%
TCATATGTGTCACACTTTGT+TGG - chr2_2:54705649-54705668 None:intergenic 35.0%
AGTGTGACACATATGACAAA+TGG + chr2_2:54705653-54705672 Msa0258380:three_prime_UTR 35.0%
!! TAAGGTTGGTTGTTGTTTGC+GGG - chr2_2:54697097-54697116 None:intergenic 40.0%
TGAGATAAGATTCGACATCG+AGG - chr2_2:54697239-54697258 None:intergenic 40.0%
!! GTTTTGTTCTGGGTCGAATT+CGG - chr2_2:54697304-54697323 None:intergenic 40.0%
CATCAGGTGGAAAATCAAAC+GGG - chr2_2:54697413-54697432 None:intergenic 40.0%
! TTCCACCTGATGATGAGAAT+TGG + chr2_2:54697421-54697440 Msa0258380:CDS 40.0%
TTCCAATTCTCATCATCAGG+TGG - chr2_2:54697426-54697445 None:intergenic 40.0%
!! TTGAGAGAGCTTTGGGATAA+TGG + chr2_2:54697456-54697475 Msa0258380:CDS 40.0%
!! TGAGAGAGCTTTGGGATAAT+GGG + chr2_2:54697457-54697476 Msa0258380:CDS 40.0%
TTCACATATTCCCATTCCTC+AGG - chr2_2:54697528-54697547 None:intergenic 40.0%
AGGAATGGGAATATGTGAAG+TGG + chr2_2:54697529-54697548 Msa0258380:CDS 40.0%
GGAGGAATAGGTTTCCTATA+AGG - chr2_2:54697600-54697619 None:intergenic 40.0%
TTAGTAGGTACAGGAGGAAT+AGG - chr2_2:54697612-54697631 None:intergenic 40.0%
GAATGATTAGTAGGTACAGG+AGG - chr2_2:54697618-54697637 None:intergenic 40.0%
GCAGAATGATTAGTAGGTAC+AGG - chr2_2:54697621-54697640 None:intergenic 40.0%
AGACTCACACACCTTAAATG+TGG - chr2_2:54697894-54697913 None:intergenic 40.0%
! CATTTAAGGTGTGTGAGTCT+AGG + chr2_2:54697894-54697913 Msa0258380:intron 40.0%
!! GTCTCTGTTTTGTTCAGTGT+TGG + chr2_2:54698467-54698486 Msa0258380:intron 40.0%
GGTAAATAGAGGCTATTGCA+AGG + chr2_2:54698488-54698507 Msa0258380:intron 40.0%
AAATAGAGGCTATTGCAAGG+TGG + chr2_2:54698491-54698510 Msa0258380:intron 40.0%
CTTCTTATCAAGTGTCCTTC+GGG - chr2_2:54698632-54698651 None:intergenic 40.0%
GCTTCTTATCAAGTGTCCTT+CGG - chr2_2:54698633-54698652 None:intergenic 40.0%
!! CTTTGGGATGATATTGCTCA+AGG + chr2_2:54698776-54698795 Msa0258380:CDS 40.0%
GGTGTTTATACTTCTCCAGA+TGG + chr2_2:54698803-54698822 Msa0258380:CDS 40.0%
!!! ACATTGTTTTGGCATGCAGT+TGG + chr2_2:54698848-54698867 Msa0258380:intron 40.0%
CTAAGCTGTTTACCCAAACA+GGG - chr2_2:54698948-54698967 None:intergenic 40.0%
ACTAAGCTGTTTACCCAAAC+AGG - chr2_2:54698949-54698968 None:intergenic 40.0%
CAGACAATTACGGTACTGTT+TGG - chr2_2:54699140-54699159 None:intergenic 40.0%
CCAACACACACAGACAATTA+CGG - chr2_2:54699150-54699169 None:intergenic 40.0%
CGTAATTGTCTGTGTGTGTT+GGG + chr2_2:54699148-54699167 Msa0258380:intron 40.0%
GTAATTGTCTGTGTGTGTTG+GGG + chr2_2:54699149-54699168 Msa0258380:intron 40.0%
TCGTGAATGTATTTCCGTAG+GGG + chr2_2:54699214-54699233 Msa0258380:intron 40.0%
ATACAAGCCATCACTGATGT+TGG + chr2_2:54699320-54699339 Msa0258380:intron 40.0%
CAAATCACCAACATCAGTGA+TGG - chr2_2:54699330-54699349 None:intergenic 40.0%
GTTAAACACAGGACTGATAG+GGG + chr2_2:54699399-54699418 Msa0258380:intron 40.0%
TCCACATGCAAAAGCCAATT+GGG + chr2_2:54699471-54699490 Msa0258380:intron 40.0%
TTGATATAGGCGGCAAACAA+AGG + chr2_2:54699538-54699557 Msa0258380:intron 40.0%
! CAAACAAAGGACCAAGCTTT+TGG + chr2_2:54699551-54699570 Msa0258380:intron 40.0%
CTGCAAGGACAATAATATGC+CGG + chr2_2:54699774-54699793 Msa0258380:intron 40.0%
TGCAAGGACAATAATATGCC+GGG + chr2_2:54699775-54699794 Msa0258380:intron 40.0%
TCCAACAGGGACATATTGAA+GGG - chr2_2:54699945-54699964 None:intergenic 40.0%
TTACGAAAACCTCTCCAACA+GGG - chr2_2:54699958-54699977 None:intergenic 40.0%
ATTACGAAAACCTCTCCAAC+AGG - chr2_2:54699959-54699978 None:intergenic 40.0%
!! TTTTGGGTAGTTAGCCAACT+TGG - chr2_2:54700006-54700025 None:intergenic 40.0%
!! GAAAGTGTTACACAATGCAG+TGG - chr2_2:54700204-54700223 None:intergenic 40.0%
AGATATACATACTTGGACCC+GGG - chr2_2:54700345-54700364 None:intergenic 40.0%
CAGATATACATACTTGGACC+CGG - chr2_2:54700346-54700365 None:intergenic 40.0%
AGAGAGAGAATGGCTTGATA+AGG + chr2_2:54700508-54700527 Msa0258380:CDS 40.0%
TTGAAGTCCCCTATTATGAG+AGG + chr2_2:54700567-54700586 Msa0258380:CDS 40.0%
TGAAGTCCCCTATTATGAGA+GGG + chr2_2:54700568-54700587 Msa0258380:CDS 40.0%
CCATTCATCCCTCTCATAAT+AGG - chr2_2:54700579-54700598 None:intergenic 40.0%
CCTATTATGAGAGGGATGAA+TGG + chr2_2:54700576-54700595 Msa0258380:CDS 40.0%
!! GATGAATGGGTTAAGGAGTT+TGG + chr2_2:54700590-54700609 Msa0258380:CDS 40.0%
TCTCTCTGATACGTTGTAAC+TGG + chr2_2:54700681-54700700 Msa0258380:intron 40.0%
! AAAACTGTATTTTCGTGGCC+AGG + chr2_2:54700711-54700730 Msa0258380:intron 40.0%
! AAACTGTATTTTCGTGGCCA+GGG + chr2_2:54700712-54700731 Msa0258380:intron 40.0%
!! CACGATTTGCTTTAGCTTTC+TGG + chr2_2:54701147-54701166 Msa0258380:intron 40.0%
TTACATTATCTGTGCCATGC+AGG + chr2_2:54701387-54701406 Msa0258380:intron 40.0%
TACATTATCTGTGCCATGCA+GGG + chr2_2:54701388-54701407 Msa0258380:intron 40.0%
ATGTGATGACCAAACTTCAG+CGG + chr2_2:54701450-54701469 Msa0258380:CDS 40.0%
ATGTTTGTGAACAAGCCAGA+TGG + chr2_2:54701616-54701635 Msa0258380:CDS 40.0%
TGGATCTATCAAACAGACAG+AGG - chr2_2:54701719-54701738 None:intergenic 40.0%
GTATTAAGATGTACTCCCTC+CGG + chr2_2:54701762-54701781 Msa0258380:intron 40.0%
ACATGAATCTGTACTCCATC+CGG - chr2_2:54701893-54701912 None:intergenic 40.0%
AAATGGCAAGAAGGAGATGT+CGG - chr2_2:54701936-54701955 None:intergenic 40.0%
TGGAAAAGAACACTGGTGAT+GGG - chr2_2:54701992-54702011 None:intergenic 40.0%
TTGGAAAAGAACACTGGTGA+TGG - chr2_2:54701993-54702012 None:intergenic 40.0%
! TTGATAACACTCGATATGGC+TGG + chr2_2:54702065-54702084 Msa0258380:intron 40.0%
AAAACCTGTTAGCCCTTGAT+CGG + chr2_2:54702105-54702124 Msa0258380:intron 40.0%
! TTACTCTTGGGTTTTGCCTT+TGG + chr2_2:54702198-54702217 Msa0258380:intron 40.0%
CCAATCAGGAAAAGGAAACA+TGG - chr2_2:54702624-54702643 None:intergenic 40.0%
! CCATGTTTCCTTTTCCTGAT+TGG + chr2_2:54702621-54702640 Msa0258380:intron 40.0%
! AAAACAGTATGGTGCCAATC+AGG - chr2_2:54702638-54702657 None:intergenic 40.0%
GCATGCTGTGGATCATTATA+CGG - chr2_2:54702727-54702746 None:intergenic 40.0%
TCATACAAGTAAGCATGCTG+TGG - chr2_2:54702739-54702758 None:intergenic 40.0%
CAGCATGCTTACTTGTATGA+AGG + chr2_2:54702739-54702758 Msa0258380:CDS 40.0%
TGCTTACTTGTATGAAGGAG+AGG + chr2_2:54702744-54702763 Msa0258380:CDS 40.0%
TGTTACAGGTTCCTGATTAC+TGG + chr2_2:54702884-54702903 Msa0258380:intron 40.0%
! GCGTATGTTTTCCAGTAATC+AGG - chr2_2:54702898-54702917 None:intergenic 40.0%
CTTTCTATAGATCTCCCCTT+AGG + chr2_2:54702956-54702975 Msa0258380:CDS 40.0%
TGTTATTCTCCTCTGGTCAA+GGG - chr2_2:54703442-54703461 None:intergenic 40.0%
! TTGTTATTCTCCTCTGGTCA+AGG - chr2_2:54703443-54703462 None:intergenic 40.0%
TTAAGCAGGACAAATTCAGG+AGG - chr2_2:54703467-54703486 None:intergenic 40.0%
! TTCTCACCTTTTTGCAAAGG+TGG - chr2_2:54703626-54703645 None:intergenic 40.0%
!! TTGAAAAAGTGTCCAAGCCA+TGG + chr2_2:54703747-54703766 Msa0258380:CDS 40.0%
TAGGTTATCAAACCATGGCT+TGG - chr2_2:54703762-54703781 None:intergenic 40.0%
! AAGCCATGGTTTGATAACCT+AGG + chr2_2:54703761-54703780 Msa0258380:CDS 40.0%
TTATGTTTGGAAGAGGCCAT+TGG + chr2_2:54703866-54703885 Msa0258380:CDS 40.0%
TATGTTTGGAAGAGGCCATT+GGG + chr2_2:54703867-54703886 Msa0258380:CDS 40.0%
ATTGCGTAGAAGAGAGAAAG+AGG + chr2_2:54703904-54703923 Msa0258380:CDS 40.0%
GAAAGAGGAGAAAAAGAAGG+CGG + chr2_2:54703919-54703938 Msa0258380:CDS 40.0%
TTGCCAGATGAAGATGATAC+CGG + chr2_2:54703950-54703969 Msa0258380:CDS 40.0%
! GATATTGCACCATCGAGTTT+TGG + chr2_2:54704043-54704062 Msa0258380:CDS 40.0%
TCAATAGACCCAAAACTCGA+TGG - chr2_2:54704055-54704074 None:intergenic 40.0%
ATCAAAGACAGATCAGCAGA+AGG + chr2_2:54704081-54704100 Msa0258380:CDS 40.0%
TCAAAGACAGATCAGCAGAA+GGG + chr2_2:54704082-54704101 Msa0258380:CDS 40.0%
TGTAGAAAATGGCGATTTGC+CGG - chr2_2:54704113-54704132 None:intergenic 40.0%
GTCAACACACATACACACAA+GGG - chr2_2:54704328-54704347 None:intergenic 40.0%
AGTCAACACACATACACACA+AGG - chr2_2:54704329-54704348 None:intergenic 40.0%
ATGTTCAGCAGATGGTTAAC+AGG + chr2_2:54704481-54704500 Msa0258380:intron 40.0%
CTCAAGTGGTAACCAACTAT+TGG + chr2_2:54704659-54704678 Msa0258380:intron 40.0%
CAAGAATGGATGCCAATAGT+TGG - chr2_2:54704674-54704693 None:intergenic 40.0%
!!! TCGTTGTCATTTGGCTTTTC+AGG + chr2_2:54705002-54705021 Msa0258380:intron 40.0%
!! TTTCCATTCTGGAACAAGGT+TGG + chr2_2:54705048-54705067 Msa0258380:CDS 40.0%
AACAAGGTTGGATCAAAACC+AGG + chr2_2:54705060-54705079 Msa0258380:CDS 40.0%
ACAAGGTTGGATCAAAACCA+GGG + chr2_2:54705061-54705080 Msa0258380:CDS 40.0%
GAGTCAAGAAGTTATTCAGG+TGG + chr2_2:54705207-54705226 Msa0258380:CDS 40.0%
TCAAAAGAGCGAAGAATGAG+TGG + chr2_2:54705294-54705313 Msa0258380:CDS 40.0%
ATGTTGTCTAAATCCCTCTC+TGG - chr2_2:54705342-54705361 None:intergenic 40.0%
TGAGGTTCTCTTTGGATGTT+TGG - chr2_2:54705405-54705424 None:intergenic 40.0%
TTGGGTTTCTGATTCTGCGT+CGG - chr2_2:54697211-54697230 None:intergenic 45.0%
! GACTGGTGCTTCAGTGTTTT+GGG - chr2_2:54697274-54697293 None:intergenic 45.0%
CGACAAAAAAACTCGTCGCA+AGG + chr2_2:54697374-54697393 Msa0258380:CDS 45.0%
!! ACACCATTACTGGTACTGGT+TGG + chr2_2:54697484-54697503 Msa0258380:CDS 45.0%
!! CACCATTACTGGTACTGGTT+GGG + chr2_2:54697485-54697504 Msa0258380:CDS 45.0%
! TTTTGCTACGCCTGAGGAAT+GGG + chr2_2:54697515-54697534 Msa0258380:CDS 45.0%
!! CTTTCCCGCTTTAAAGTCAC+TGG + chr2_2:54698039-54698058 Msa0258380:intron 45.0%
!! GCATCCAGTGACTTTAAAGC+GGG - chr2_2:54698046-54698065 None:intergenic 45.0%
! GGCATCCAGTGACTTTAAAG+CGG - chr2_2:54698047-54698066 None:intergenic 45.0%
AAATGCTAACAAGTGCCCGA+AGG + chr2_2:54698614-54698633 Msa0258380:intron 45.0%
ACAAACCTGACAAGTCCATC+TGG - chr2_2:54698821-54698840 None:intergenic 45.0%
AATGAGATACAGGCCCTGTT+TGG + chr2_2:54698932-54698951 Msa0258380:intron 45.0%
ATGAGATACAGGCCCTGTTT+GGG + chr2_2:54698933-54698952 Msa0258380:intron 45.0%
CCGTAATTGTCTGTGTGTGT+TGG + chr2_2:54699147-54699166 Msa0258380:intron 45.0%
!! ACTGATGTTGGTGATTTGCC+TGG + chr2_2:54699332-54699351 Msa0258380:intron 45.0%
CTCCACATGCAAAAGCCAAT+TGG + chr2_2:54699470-54699489 Msa0258380:intron 45.0%
! CCAAGTAATGTGTTGGTCAG+CGG - chr2_2:54699514-54699533 None:intergenic 45.0%
CTCGTCAAAGACCAAAAGCT+TGG - chr2_2:54699565-54699584 None:intergenic 45.0%
!! CAAGCTTTTGGTCTTTGACG+AGG + chr2_2:54699563-54699582 Msa0258380:intron 45.0%
GCAAGGACAATAATATGCCG+GGG + chr2_2:54699776-54699795 Msa0258380:intron 45.0%
! TTTTGGTCGCGTAGCTTAGT+CGG - chr2_2:54699824-54699843 None:intergenic 45.0%
ACATATTGAAGGGGGAAGCA+GGG - chr2_2:54699935-54699954 None:intergenic 45.0%
CAACAGGGACATATTGAAGG+GGG - chr2_2:54699943-54699962 None:intergenic 45.0%
CCAACAGGGACATATTGAAG+GGG - chr2_2:54699944-54699963 None:intergenic 45.0%
CTCCAACAGGGACATATTGA+AGG - chr2_2:54699946-54699965 None:intergenic 45.0%
TCAATATGTCCCTGTTGGAG+AGG + chr2_2:54699946-54699965 Msa0258380:intron 45.0%
! TCATGTTTTCTGCGGCTTCA+TGG + chr2_2:54700074-54700093 Msa0258380:intron 45.0%
CAATAACACCATGACCCTCT+GGG - chr2_2:54700293-54700312 None:intergenic 45.0%
TCAATAACACCATGACCCTC+TGG - chr2_2:54700294-54700313 None:intergenic 45.0%
CCTGTTATAGAACCTGTTCC+CGG + chr2_2:54700324-54700343 Msa0258380:CDS 45.0%
CTGTTATAGAACCTGTTCCC+GGG + chr2_2:54700325-54700344 Msa0258380:CDS 45.0%
AAGAAGCAATGCGAGCTGAA+GGG + chr2_2:54700453-54700472 Msa0258380:CDS 45.0%
AAGCCATTCTCTCTCTTCTG+GGG - chr2_2:54700504-54700523 None:intergenic 45.0%
CAAGCCATTCTCTCTCTTCT+GGG - chr2_2:54700505-54700524 None:intergenic 45.0%
TCAAGCCATTCTCTCTCTTC+TGG - chr2_2:54700506-54700525 None:intergenic 45.0%
!! TGAGAGGGATGAATGGGTTA+AGG + chr2_2:54700583-54700602 Msa0258380:CDS 45.0%
AAAGGTCGCTATCGTTATGC+TGG + chr2_2:54700737-54700756 Msa0258380:CDS 45.0%
TATGCTGGTCAGATGAAGCA+TGG + chr2_2:54700752-54700771 Msa0258380:CDS 45.0%
ATGCTGGTCAGATGAAGCAT+GGG + chr2_2:54700753-54700772 Msa0258380:CDS 45.0%
! ATATCTGCTGCACCGATCAA+GGG - chr2_2:54702120-54702139 None:intergenic 45.0%
! TATATCTGCTGCACCGATCA+AGG - chr2_2:54702121-54702140 None:intergenic 45.0%
GGTGCAGCAGATATATGTTG+TGG + chr2_2:54702126-54702145 Msa0258380:intron 45.0%
ACATAGCAGAGGTAGACCAA+AGG - chr2_2:54702217-54702236 None:intergenic 45.0%
ACAACACTGCTACATAGCAG+AGG - chr2_2:54702228-54702247 None:intergenic 45.0%
!! GCAGTGTTGTTCACCCTTTT+TGG + chr2_2:54702238-54702257 Msa0258380:intron 45.0%
TTCCATGCAGTTATCCTGGA+TGG + chr2_2:54702456-54702475 Msa0258380:intron 45.0%
! GTATGGTGCCAATCAGGAAA+AGG - chr2_2:54702632-54702651 None:intergenic 45.0%
GCAGTGGTTAGAGAAAAGAG+AGG + chr2_2:54702700-54702719 Msa0258380:intron 45.0%
TGTATGAAGGAGAGGATGTG+TGG + chr2_2:54702752-54702771 Msa0258380:CDS 45.0%
ATACGCGCATGAAGTAGATC+AGG + chr2_2:54702912-54702931 Msa0258380:CDS 45.0%
AGCTGGCATAGGTATCCTAA+GGG - chr2_2:54702974-54702993 None:intergenic 45.0%
TATTCCAACTCAGCTGGCAT+AGG - chr2_2:54702985-54703004 None:intergenic 45.0%
TTGGAATACTGGTGGTCCAA+AGG + chr2_2:54702997-54703016 Msa0258380:CDS 45.0%
!! TGAGTTTTGACGGGTCTTCA+GGG - chr2_2:54703508-54703527 None:intergenic 45.0%
!! ATGAGTTTTGACGGGTCTTC+AGG - chr2_2:54703509-54703528 None:intergenic 45.0%
TAAATCCGGTTGGAGTGTGA+AGG - chr2_2:54703553-54703572 None:intergenic 45.0%
TGGCAACCACCTTTGCAAAA+AGG + chr2_2:54703617-54703636 Msa0258380:CDS 45.0%
AAGGCTATATTCCTACCCGA+TGG + chr2_2:54703659-54703678 Msa0258380:CDS 45.0%
AGTCATCATAACCATCGGGT+AGG - chr2_2:54703673-54703692 None:intergenic 45.0%
AAGCTTAAGACGCTCCCATA+CGG - chr2_2:54703723-54703742 None:intergenic 45.0%
! GTTCTTCAGCCCATTTTCCT+AGG - chr2_2:54703781-54703800 None:intergenic 45.0%
ATGTTTGGAAGAGGCCATTG+GGG + chr2_2:54703868-54703887 Msa0258380:CDS 45.0%
TAACTCTTCCATGTCCCCAA+TGG - chr2_2:54703885-54703904 None:intergenic 45.0%
GGAGAAAAAGAAGGCGGAAT+CGG + chr2_2:54703925-54703944 Msa0258380:CDS 45.0%
GAGAAAAAGAAGGCGGAATC+GGG + chr2_2:54703926-54703945 Msa0258380:CDS 45.0%
AGAAAAAGAAGGCGGAATCG+GGG + chr2_2:54703927-54703946 Msa0258380:CDS 45.0%
GAACCGGTATCATCTTCATC+TGG - chr2_2:54703956-54703975 None:intergenic 45.0%
!!! GAGTTTTGGGTCTATTGAGC+AGG + chr2_2:54704057-54704076 Msa0258380:CDS 45.0%
GTAGAAAATGGCGATTTGCC+GGG - chr2_2:54704112-54704131 None:intergenic 45.0%
! TTCTAGCAGCCTTATCTCTG+CGG + chr2_2:54704150-54704169 Msa0258380:CDS 45.0%
GGTGCATTATGTTCAGCAGA+TGG + chr2_2:54704473-54704492 Msa0258380:intron 45.0%
ACCACGTAGTTGAACTCAAG+TGG + chr2_2:54704645-54704664 Msa0258380:intron 45.0%
ACCACTTGAGTTCAACTACG+TGG - chr2_2:54704649-54704668 None:intergenic 45.0%
ATGCTTGTAACACTGTGCCA+AGG + chr2_2:54704878-54704897 Msa0258380:intron 45.0%
GATCCAACCTTGTTCCAGAA+TGG - chr2_2:54705054-54705073 None:intergenic 45.0%
ATGTGATCAATGTGTTGCGC+AGG - chr2_2:54705093-54705112 None:intergenic 45.0%
ATCAGCGATGTGAAAACAGC+TGG + chr2_2:54705111-54705130 Msa0258380:CDS 45.0%
TTCAGGTGGGAGATTTCTTG+AGG + chr2_2:54705221-54705240 Msa0258380:CDS 45.0%
GAAGAATGAGTGGCAACATG+TGG + chr2_2:54705304-54705323 Msa0258380:CDS 45.0%
! AGTGAGCATAGGTTTTGCCT+CGG + chr2_2:54705488-54705507 Msa0258380:three_prime_UTR 45.0%
!!! ATAATTTATTTATTTGTTTT+TGG - chr2_2:54699841-54699860 None:intergenic 5.0%
!!! TTTTCAAATTTATAAAAAAA+GGG + chr2_2:54700883-54700902 Msa0258380:intron 5.0%
!!! GTGGTGGTGGTTTTTGGAAG+CGG - chr2_2:54697143-54697162 None:intergenic 50.0%
!!! ATCGGAGGGGTTTTTGGAGT+CGG - chr2_2:54697169-54697188 None:intergenic 50.0%
TTCGACATCGAGGTCGTCTT+GGG - chr2_2:54697229-54697248 None:intergenic 50.0%
ATTCGACATCGAGGTCGTCT+TGG - chr2_2:54697230-54697249 None:intergenic 50.0%
!! GGACTGGTGCTTCAGTGTTT+TGG - chr2_2:54697275-54697294 None:intergenic 50.0%
! TTGTTCTGGGTCGAATTCGG+AGG - chr2_2:54697301-54697320 None:intergenic 50.0%
GTCCCAACCAGTACCAGTAA+TGG - chr2_2:54697490-54697509 None:intergenic 50.0%
! CTTTTGCTACGCCTGAGGAA+TGG + chr2_2:54697514-54697533 Msa0258380:CDS 50.0%
CTTCATAAATGGCCCGACTC+TGG + chr2_2:54698193-54698212 Msa0258380:intron 50.0%
AATCGCAGCCGGCACAAAAT+AGG - chr2_2:54698688-54698707 None:intergenic 50.0%
CCAGTATTGTCAATCGCAGC+CGG - chr2_2:54698699-54698718 None:intergenic 50.0%
! CTTCTCCAGATGGACTTGTC+AGG + chr2_2:54698813-54698832 Msa0258380:CDS 50.0%
!!! GGTTTTGGTGGTAGTGGAAG+TGG + chr2_2:54698892-54698911 Msa0258380:intron 50.0%
TTGTCTGTGTGTGTTGGGGT+TGG + chr2_2:54699153-54699172 Msa0258380:intron 50.0%
!! ACCTTTTGACTACGCCCCTA+CGG - chr2_2:54699231-54699250 None:intergenic 50.0%
TTGCCTGGTTGTGTGACCAT+AGG + chr2_2:54699347-54699366 Msa0258380:intron 50.0%
TGCCTGGTTGTGTGACCATA+GGG + chr2_2:54699348-54699367 Msa0258380:intron 50.0%
!!! GCCCAATTGGCTTTTGCATG+TGG - chr2_2:54699475-54699494 None:intergenic 50.0%
GTTTGTGCATCAGGCCCAAT+TGG - chr2_2:54699488-54699507 None:intergenic 50.0%
! CAGCGGTTTGTTTGTGCATC+AGG - chr2_2:54699497-54699516 None:intergenic 50.0%
CCGCTGACCAACACATTACT+TGG + chr2_2:54699511-54699530 Msa0258380:intron 50.0%
GGACAATAATATGCCGGGGT+CGG + chr2_2:54699780-54699799 Msa0258380:intron 50.0%
GACAATAATATGCCGGGGTC+GGG + chr2_2:54699781-54699800 Msa0258380:intron 50.0%
ACAATAATATGCCGGGGTCG+GGG + chr2_2:54699782-54699801 Msa0258380:intron 50.0%
CGTAGCTTAGTCGGGAATCT+AGG - chr2_2:54699815-54699834 None:intergenic 50.0%
TTTGGTCGCGTAGCTTAGTC+GGG - chr2_2:54699823-54699842 None:intergenic 50.0%
!!! ATACATGTTTTGGTGGGGGG+TGG + chr2_2:54699897-54699916 Msa0258380:intron 50.0%
CATATTGAAGGGGGAAGCAG+GGG - chr2_2:54699934-54699953 None:intergenic 50.0%
GACATATTGAAGGGGGAAGC+AGG - chr2_2:54699936-54699955 None:intergenic 50.0%
CCCCTTCAATATGTCCCTGT+TGG + chr2_2:54699941-54699960 Msa0258380:intron 50.0%
! CGGCTTCATGGTAATGATCG+AGG + chr2_2:54700086-54700105 Msa0258380:intron 50.0%
ATGGTTTCGAAACGACCCAG+AGG + chr2_2:54700275-54700294 Msa0258380:CDS 50.0%
TGGTTTCGAAACGACCCAGA+GGG + chr2_2:54700276-54700295 Msa0258380:CDS 50.0%
CCGGGAACAGGTTCTATAAC+AGG - chr2_2:54700327-54700346 None:intergenic 50.0%
GAAGAAGCAATGCGAGCTGA+AGG + chr2_2:54700452-54700471 Msa0258380:CDS 50.0%
TGTCCCCAGAAGAGAGAGAA+TGG + chr2_2:54700498-54700517 Msa0258380:CDS 50.0%
! ATTTTCGTGGCCAGGGAGAA+AGG + chr2_2:54700719-54700738 Msa0258380:intron 50.0%
ATGAAGCATGGGAGGATGCA+TGG + chr2_2:54700764-54700783 Msa0258380:CDS 50.0%
AAAAAAGGGGGAGAGGAAGC+TGG + chr2_2:54700897-54700916 Msa0258380:intron 50.0%
TGTCAATTTCAGCTGCACGC+TGG + chr2_2:54701562-54701581 Msa0258380:intron 50.0%
TTTCAGCTGCACGCTGGTAT+AGG + chr2_2:54701568-54701587 Msa0258380:intron 50.0%
GTTCACAAACATGCGAGCCT+TGG - chr2_2:54701608-54701627 None:intergenic 50.0%
AAGAAGGAGATGTCGGAGGA+AGG - chr2_2:54701929-54701948 None:intergenic 50.0%
GTAGCAAGTCTGTCACGCTT+AGG - chr2_2:54702400-54702419 None:intergenic 50.0%
GCTGTTCCATGCAGTTATCC+TGG + chr2_2:54702452-54702471 Msa0258380:intron 50.0%
CTCCATCCAGGATAACTGCA+TGG - chr2_2:54702461-54702480 None:intergenic 50.0%
TGAAGGAGAGGATGTGTGGA+TGG + chr2_2:54702756-54702775 Msa0258380:CDS 50.0%
GCTGGCATAGGTATCCTAAG+GGG - chr2_2:54702973-54702992 None:intergenic 50.0%
CAGCTGGCATAGGTATCCTA+AGG - chr2_2:54702975-54702994 None:intergenic 50.0%
GATACCTATGCCAGCTGAGT+TGG + chr2_2:54702978-54702997 Msa0258380:CDS 50.0%
! TGCCAGCTGAGTTGGAATAC+TGG + chr2_2:54702986-54703005 Msa0258380:CDS 50.0%
CACCAGTATTCCAACTCAGC+TGG - chr2_2:54702991-54703010 None:intergenic 50.0%
! CAGCTGAGTTGGAATACTGG+TGG + chr2_2:54702989-54703008 Msa0258380:CDS 50.0%
TCTCCTCTGGTCAAGGGATT+TGG - chr2_2:54703436-54703455 None:intergenic 50.0%
!! GGAGGCTTGTTATTCTCCTC+TGG - chr2_2:54703449-54703468 None:intergenic 50.0%
GTTGGAGTGTGAAGGATGAG+AGG - chr2_2:54703545-54703564 None:intergenic 50.0%
CTCATCCTTCACACTCCAAC+CGG + chr2_2:54703545-54703564 Msa0258380:CDS 50.0%
GATCAGCAGAAGGGAAAACC+CGG + chr2_2:54704091-54704110 Msa0258380:CDS 50.0%
CACAACTCACCGCAGAGATA+AGG - chr2_2:54704162-54704181 None:intergenic 50.0%
GTCAGTTTCCCTCCTGTGAT+TGG + chr2_2:54705138-54705157 Msa0258380:CDS 50.0%
! CCTTTTGGCCAATCACAGGA+GGG - chr2_2:54705149-54705168 None:intergenic 50.0%
! CCTCCTGTGATTGGCCAAAA+GGG + chr2_2:54705147-54705166 Msa0258380:CDS 50.0%
! CTACCCTTTTGGCCAATCAC+AGG - chr2_2:54705153-54705172 None:intergenic 50.0%
! CTGTGATTGGCCAAAAGGGT+AGG + chr2_2:54705151-54705170 Msa0258380:CDS 50.0%
!! GTGGTTTTTGGAAGCGGCGA+AGG - chr2_2:54697137-54697156 None:intergenic 55.0%
!!! TTTTTGGAGTCGGAGGGTGG+TGG - chr2_2:54697159-54697178 None:intergenic 55.0%
!!! GAGGGGTTTTTGGAGTCGGA+GGG - chr2_2:54697165-54697184 None:intergenic 55.0%
! GTCGGAATCGGAGGGGTTTT+TGG - chr2_2:54697175-54697194 None:intergenic 55.0%
GGATGAGTCGGAGTCGGAAT+CGG - chr2_2:54697187-54697206 None:intergenic 55.0%
TTCTGCGTCGGAGGATGAGT+CGG - chr2_2:54697199-54697218 None:intergenic 55.0%
GGTTTCTGATTCTGCGTCGG+AGG - chr2_2:54697208-54697227 None:intergenic 55.0%
CCTCAGGCGTAGCAAAAGCA+GGG - chr2_2:54697512-54697531 None:intergenic 55.0%
TCCTCAGGCGTAGCAAAAGC+AGG - chr2_2:54697513-54697532 None:intergenic 55.0%
CCGGCTGCGATTGACAATAC+TGG + chr2_2:54698696-54698715 Msa0258380:intron 55.0%
TCTGTGTGTGTTGGGGTTGG+AGG + chr2_2:54699156-54699175 Msa0258380:intron 55.0%
CTGTGTGTGTTGGGGTTGGA+GGG + chr2_2:54699157-54699176 Msa0258380:intron 55.0%
TGTGTGTGTTGGGGTTGGAG+GGG + chr2_2:54699158-54699177 Msa0258380:intron 55.0%
! TGGGGTTGGAGGGGACTTTT+AGG + chr2_2:54699167-54699186 Msa0258380:intron 55.0%
! TCCGTAGGGGCGTAGTCAAA+AGG + chr2_2:54699227-54699246 Msa0258380:intron 55.0%
GCCTGGTTGTGTGACCATAG+GGG + chr2_2:54699349-54699368 Msa0258380:intron 55.0%
TCCCCTATGGTCACACAACC+AGG - chr2_2:54699353-54699372 None:intergenic 55.0%
TGTCTCAGTTGGGAGCTGCA+AGG + chr2_2:54699759-54699778 Msa0258380:intron 55.0%
ACATACTTGGACCCGGGAAC+AGG - chr2_2:54700339-54700358 None:intergenic 55.0%
ACGATAGCGACCTTTCTCCC+TGG - chr2_2:54700732-54700751 None:intergenic 55.0%
CTGGTCAGATGAAGCATGGG+AGG + chr2_2:54700756-54700775 Msa0258380:CDS 55.0%
CATGGGAGGATGCATGGATG+TGG + chr2_2:54700770-54700789 Msa0258380:CDS 55.0%
AGGTGAAGTTGCTGCTGCCA+AGG + chr2_2:54701588-54701607 Msa0258380:CDS 55.0%
TGGCAAGAAGGAGATGTCGG+AGG - chr2_2:54701933-54701952 None:intergenic 55.0%
! TGCACCGATCAAGGGCTAAC+AGG - chr2_2:54702112-54702131 None:intergenic 55.0%
CCTCTGGTCAAGGGATTTGG+AGG - chr2_2:54703433-54703452 None:intergenic 55.0%
CCTCCAAATCCCTTGACCAG+AGG + chr2_2:54703430-54703449 Msa0258380:intron 55.0%
GCTCGGGTTCCTTGTTAAGC+AGG - chr2_2:54703481-54703500 None:intergenic 55.0%
! TTTGACGGGTCTTCAGGGTC+AGG - chr2_2:54703503-54703522 None:intergenic 55.0%
TGTTGCGCAGGAACTAACCC+TGG - chr2_2:54705081-54705100 None:intergenic 55.0%
! CCCTCCTGTGATTGGCCAAA+AGG + chr2_2:54705146-54705165 Msa0258380:CDS 55.0%
! CCCTTTTGGCCAATCACAGG+AGG - chr2_2:54705150-54705169 None:intergenic 55.0%
! CGGCTTTCAGCCTACCCTTT+TGG - chr2_2:54705164-54705183 None:intergenic 55.0%
AAGGGTAGGCTGAAAGCCGT+CGG + chr2_2:54705165-54705184 Msa0258380:CDS 55.0%
! CGGTCGAGTCTGAGACATAG+AGG - chr2_2:54705250-54705269 None:intergenic 55.0%
TGGCAACATGTGGCTGCATG+CGG + chr2_2:54705314-54705333 Msa0258380:CDS 55.0%
TCCTTCGTGTCTCTATGCCG+AGG - chr2_2:54705508-54705527 None:intergenic 55.0%
!!! CGGAGGGTGGTGGTGGTTTT+TGG - chr2_2:54697149-54697168 None:intergenic 60.0%
!!! GGGTTTTTGGAGTCGGAGGG+TGG - chr2_2:54697162-54697181 None:intergenic 60.0%
!!! GGAGGGGTTTTTGGAGTCGG+AGG - chr2_2:54697166-54697185 None:intergenic 60.0%
AGTCGGAGTCGGAATCGGAG+GGG - chr2_2:54697182-54697201 None:intergenic 60.0%
GAGTCGGAGTCGGAATCGGA+GGG - chr2_2:54697183-54697202 None:intergenic 60.0%
TGAGTCGGAGTCGGAATCGG+AGG - chr2_2:54697184-54697203 None:intergenic 60.0%
GTCGGAGGATGAGTCGGAGT+CGG - chr2_2:54697193-54697212 None:intergenic 60.0%
TCGAATTCGGAGGCTGGGAC+TGG - chr2_2:54697291-54697310 None:intergenic 60.0%
CTGGGTCGAATTCGGAGGCT+GGG - chr2_2:54697296-54697315 None:intergenic 60.0%
TCTGGGTCGAATTCGGAGGC+TGG - chr2_2:54697297-54697316 None:intergenic 60.0%
!! CCCTGCTTTTGCTACGCCTG+AGG + chr2_2:54697509-54697528 Msa0258380:CDS 60.0%
CCTACGGTAGCAGTCCCCTA+TGG - chr2_2:54699366-54699385 None:intergenic 60.0%
CCATAGGGGACTGCTACCGT+AGG + chr2_2:54699363-54699382 Msa0258380:intron 60.0%
CACAGGACTGATAGGGGAGC+TGG + chr2_2:54699405-54699424 Msa0258380:intron 60.0%
TAGGTTTCGAACCCCGACCC+CGG - chr2_2:54699796-54699815 None:intergenic 60.0%
!!! ATGTTTTGGTGGGGGGTGGC+TGG + chr2_2:54699901-54699920 Msa0258380:intron 60.0%
!!! TGTTTTGGTGGGGGGTGGCT+GGG + chr2_2:54699902-54699921 Msa0258380:intron 60.0%
CGAAACGACCCAGAGGGTCA+TGG + chr2_2:54700282-54700301 Msa0258380:CDS 60.0%
GAGGATGTGTGGATGGCACC+TGG + chr2_2:54702763-54702782 Msa0258380:CDS 60.0%
GGAAGAGGCCATTGGGGACA+TGG + chr2_2:54703874-54703893 Msa0258380:CDS 60.0%
GCCTCGGCATAGAGACACGA+AGG + chr2_2:54705504-54705523 Msa0258380:three_prime_UTR 60.0%
! TTGGAGTCGGAGGGTGGTGG+TGG - chr2_2:54697156-54697175 None:intergenic 65.0%
GGGTCTTCAGGGTCAGGCTC+GGG - chr2_2:54703497-54703516 None:intergenic 65.0%
CGGGTCTTCAGGGTCAGGCT+CGG - chr2_2:54703498-54703517 None:intergenic 65.0%
GCTGCATGCGGCACCAGAGA+GGG + chr2_2:54705326-54705345 Msa0258380:CDS 65.0%
TTGGTGGGGGGTGGCTGGGT+TGG + chr2_2:54699906-54699925 Msa0258380:intron 70.0%
GGCTGCATGCGGCACCAGAG+AGG + chr2_2:54705325-54705344 Msa0258380:CDS 70.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 54696992 54705683 54696992 ID=Msa0258380;Name=Msa0258380
chr2_2 mRNA 54696992 54705683 54696992 ID=Msa0258380-mRNA-1;Parent=Msa0258380;Name=Msa0258380-mRNA-1;_AED=0.14;_eAED=0.14;_QI=134|0.9|0.90|1|1|1|11|240|834
chr2_2 exon 54696992 54697730 54696992 ID=Msa0258380-mRNA-1:exon:16460;Parent=Msa0258380-mRNA-1
chr2_2 exon 54698763 54698834 54698763 ID=Msa0258380-mRNA-1:exon:16461;Parent=Msa0258380-mRNA-1
chr2_2 exon 54700263 54700352 54700263 ID=Msa0258380-mRNA-1:exon:16462;Parent=Msa0258380-mRNA-1
chr2_2 exon 54700448 54700621 54700448 ID=Msa0258380-mRNA-1:exon:16463;Parent=Msa0258380-mRNA-1
chr2_2 exon 54700733 54700793 54700733 ID=Msa0258380-mRNA-1:exon:16464;Parent=Msa0258380-mRNA-1
chr2_2 exon 54701409 54701471 54701409 ID=Msa0258380-mRNA-1:exon:16465;Parent=Msa0258380-mRNA-1
chr2_2 exon 54701574 54701640 54701574 ID=Msa0258380-mRNA-1:exon:16466;Parent=Msa0258380-mRNA-1
chr2_2 exon 54702704 54702807 54702704 ID=Msa0258380-mRNA-1:exon:16467;Parent=Msa0258380-mRNA-1
chr2_2 exon 54702892 54703018 54702892 ID=Msa0258380-mRNA-1:exon:16468;Parent=Msa0258380-mRNA-1
chr2_2 exon 54703450 54704171 54703450 ID=Msa0258380-mRNA-1:exon:16469;Parent=Msa0258380-mRNA-1
chr2_2 exon 54705024 54705683 54705024 ID=Msa0258380-mRNA-1:exon:16470;Parent=Msa0258380-mRNA-1
chr2_2 five_prime_UTR 54696992 54697125 54696992 ID=Msa0258380-mRNA-1:five_prime_utr;Parent=Msa0258380-mRNA-1
chr2_2 CDS 54697126 54697730 54697126 ID=Msa0258380-mRNA-1:cds;Parent=Msa0258380-mRNA-1
chr2_2 CDS 54698763 54698834 54698763 ID=Msa0258380-mRNA-1:cds;Parent=Msa0258380-mRNA-1
chr2_2 CDS 54700263 54700352 54700263 ID=Msa0258380-mRNA-1:cds;Parent=Msa0258380-mRNA-1
chr2_2 CDS 54700448 54700621 54700448 ID=Msa0258380-mRNA-1:cds;Parent=Msa0258380-mRNA-1
chr2_2 CDS 54700733 54700793 54700733 ID=Msa0258380-mRNA-1:cds;Parent=Msa0258380-mRNA-1
chr2_2 CDS 54701409 54701471 54701409 ID=Msa0258380-mRNA-1:cds;Parent=Msa0258380-mRNA-1
chr2_2 CDS 54701574 54701640 54701574 ID=Msa0258380-mRNA-1:cds;Parent=Msa0258380-mRNA-1
chr2_2 CDS 54702704 54702807 54702704 ID=Msa0258380-mRNA-1:cds;Parent=Msa0258380-mRNA-1
chr2_2 CDS 54702892 54703018 54702892 ID=Msa0258380-mRNA-1:cds;Parent=Msa0258380-mRNA-1
chr2_2 CDS 54703450 54704171 54703450 ID=Msa0258380-mRNA-1:cds;Parent=Msa0258380-mRNA-1
chr2_2 CDS 54705024 54705443 54705024 ID=Msa0258380-mRNA-1:cds;Parent=Msa0258380-mRNA-1
chr2_2 three_prime_UTR 54705444 54705683 54705444 ID=Msa0258380-mRNA-1:three_prime_utr;Parent=Msa0258380-mRNA-1
Gene Sequence

>Msa0258380

ATGTTTCTCCTTCGCCGCTTCCAAAAACCACCACCACCCTCCGACTCCAAAAACCCCTCCGATTCCGACTCCGACTCATCCTCCGACGCAGAATCAGAAACCCAAGACGACCTCGATGTCGAATCTTATCTCAACTCATTCATCGCCCAAAACACTGAAGCACCAGTCCCAGCCTCCGAATTCGACCCAGAACAAAACTTCAAAGAAGTAATCGAAGCTTATCATTCCGAAAAAGTTCAAAAATACTACGACAAAAAAACTCGTCGCAAGGTTAAACATCGTAACCCGTTTGATTTTCCACCTGATGATGAGAATTGGAAAGAAGAAGATTTGAGAGAGCTTTGGGATAATGGGAATAACACCATTACTGGTACTGGTTGGGACCCTGCTTTTGCTACGCCTGAGGAATGGGAATATGTGAAGTGGAAGCATTATAAGGGACAAGATGTTCCTATTGCTCCTTTTTATCTTCCTTATAGGAAACCTATTCCTCCTGTACCTACTAATCATTCTGCTATTAAAGGTCCTAAAGATGTTATTGAAGAATTGGATAGGATTGAAGAGTTTCTCAAATGGGTTAGCTACGTTTTTGAAGATGGTAGCACATATGAAGGAACTCTTTGGGATGATATTGCTCAAGGAAAAGGTGTTTATACTTCTCCAGATGGACTTGTCAGGTATGAAGGTGAATGGTTTCGAAACGACCCAGAGGGTCATGGTGTTATTGAAGTTGAAGTACCTGTTATAGAACCTGTTCCCGGGTCCAAACTTGAAGAAGCAATGCGAGCTGAAGGGAAGATAATAAAAAGGGATTTTATGTCCCCAGAAGAGAGAGAATGGCTTGATAAGGATATTGAAGATAGTTATCTTCTTGCAAATGGCAACTTTGAAGTCCCCTATTATGAGAGGGATGAATGGGTTAAGGAGTTTGGAGAAAAGCCGGAGAAAGGTCGCTATCGTTATGCTGGTCAGATGAAGCATGGGAGGATGCATGGATGTGGTGGTAGATTTTATTTTGGAGAAATATTGGATGATGATGAGGGATGTGATGACCAAACTTCAGCGCTGCACGCTGGTATAGGTGAAGTTGCTGCTGCCAAGGCTCGCATGTTTGTGAACAAGCCAGATGGAATGGTTAGAGAAAAGAGAGGTCCGTATAATGATCCACAGCATGCTTACTTGTATGAAGGAGAGGATGTGTGGATGGCACCTGGCTTCATTAACCAATTTTATGAAGTTCCTGATTACTGGAAAACATACGCGCATGAAGTAGATCAGGAAAGAGAAATGTGGTTGAACTCTTTCTATAGATCTCCCCTTAGGATACCTATGCCAGCTGAGTTGGAATACTGGTGGTCCAAAGAGGAGAATAACAAGCCTCCTGAATTTGTCCTGCTTAACAAGGAACCCGAGCCTGACCCTGAAGACCCGTCAAAACTCATATATACTGAGGATCCTCTCATCCTTCACACTCCAACCGGATTTATCATCAATTATGTCGAGGATGAGAAATATGGAATACGTATGTTCTGGCAACCACCTTTGCAAAAAGGTGAGAAAGTTGACCCTAAAAAGGCTATATTCCTACCCGATGGTTATGATGACTTTTTTGGGATAGATAAGAACAAAAAGACCGTATGGGAGCGTCTTAAGCTTGCAATTGAAAAAGTGTCCAAGCCATGGTTTGATAACCTAGGAAAATGGGCTGAAGAACAGAAGAAAATTAGTGAAATGAAAAAGGAGGCACTTGAGAAAGAACTTGAACTGATAGAAGCTGAATTATGTTTGGAAGAGGCCATTGGGGACATGGAAGAGTTATTGCGTAGAAGAGAGAAAGAGGAGAAAAAGAAGGCGGAATCGGGGTTGCCAGATGAAGATGATACCGGTTCTGTAGTCAAACAAGATGAAAAAGCCCGTGTAGATGAAGAAGATGAAGATGATGAGGAAGACGAAGATGATATTGCACCATCGAGTTTTGGGTCTATTGAGCAGGAATCAAAGACAGATCAGCAGAAGGGAAAACCCGGCAAATCGCCATTTTCTACAACTTCACTAGCATTTACTTCTAGCAGCCTTATCTCTGCGGTTCCATCAAAGCTGCAACAATCATTTCCATTCTGGAACAAGGTTGGATCAAAACCAGGGTTAGTTCCTGCGCAACACATTGATCACATCAGCGATGTGAAAACAGCTGGTTCAGTCAGTTTCCCTCCTGTGATTGGCCAAAAGGGTAGGCTGAAAGCCGTCGGTAAAGCACATGAAAAAGTTGAGTCAAGAAGTTATTCAGGTGGGAGATTTCTTGAGGCATCCTCTATGTCTCAGACTCGACCGTGTTATACGACTTCAAAAAGTAACTCAAAAGAGCGAAGAATGAGTGGCAACATGTGGCTGCATGCGGCACCAGAGAGGGATTTAGACAACATACTCTCTCTGCATTCAGCTTCATCAATGTACAATTTTTATCCAAACATCCAAAGAGAACCTCACTTCAAATTTAAGCTTTGA
Protein sequence

>Msa0258380

MFLLRRFQKPPPPSDSKNPSDSDSDSSSDAESETQDDLDVESYLNSFIAQNTEAPVPASEFDPEQNFKEVIEAYHSEKVQKYYDKKTRRKVKHRNPFDFPPDDENWKEEDLRELWDNGNNTITGTGWDPAFATPEEWEYVKWKHYKGQDVPIAPFYLPYRKPIPPVPTNHSAIKGPKDVIEELDRIEEFLKWVSYVFEDGSTYEGTLWDDIAQGKGVYTSPDGLVRYEGEWFRNDPEGHGVIEVEVPVIEPVPGSKLEEAMRAEGKIIKRDFMSPEEREWLDKDIEDSYLLANGNFEVPYYERDEWVKEFGEKPEKGRYRYAGQMKHGRMHGCGGRFYFGEILDDDEGCDDQTSALHAGIGEVAAAKARMFVNKPDGMVREKRGPYNDPQHAYLYEGEDVWMAPGFINQFYEVPDYWKTYAHEVDQEREMWLNSFYRSPLRIPMPAELEYWWSKEENNKPPEFVLLNKEPEPDPEDPSKLIYTEDPLILHTPTGFIINYVEDEKYGIRMFWQPPLQKGEKVDPKKAIFLPDGYDDFFGIDKNKKTVWERLKLAIEKVSKPWFDNLGKWAEEQKKISEMKKEALEKELELIEAELCLEEAIGDMEELLRRREKEEKKKAESGLPDEDDTGSVVKQDEKARVDEEDEDDEEDEDDIAPSSFGSIEQESKTDQQKGKPGKSPFSTTSLAFTSSSLISAVPSKLQQSFPFWNKVGSKPGLVPAQHIDHISDVKTAGSVSFPPVIGQKGRLKAVGKAHEKVESRSYSGGRFLEASSMSQTRPCYTTSKSNSKERRMSGNMWLHAAPERDLDNILSLHSASSMYNFYPNIQREPHFKFKL*