Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1453670 | sp|Q0WV12|ANL2_ARATH | 63.108 | 740 | 239 | 9 | 51 | 790 | 94 | 799 | 0.0 | 917 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1453670 | A0A396JYM0 | 98.737 | 792 | 10 | 0 | 1 | 792 | 1 | 792 | 0.0 | 1618 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1453670 | TF | HB-HD-ZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004350 | Msa1453670 | 0.836795 | 7.589948e-57 | -8.615850e-47 |
| Msa0030730 | Msa1453670 | 0.809168 | 2.161772e-50 | -8.615850e-47 |
| Msa0032400 | Msa1453670 | 0.806094 | 9.720368e-50 | -8.615850e-47 |
| Msa0039490 | Msa1453670 | 0.832549 | 8.871082e-56 | -8.615850e-47 |
| Msa0056040 | Msa1453670 | 0.801921 | 7.168442e-49 | -8.615850e-47 |
| Msa0059960 | Msa1453670 | -0.814739 | 1.321505e-51 | -8.615850e-47 |
| Msa0062750 | Msa1453670 | 0.811059 | 8.459396e-51 | -8.615850e-47 |
| Msa0073820 | Msa1453670 | 0.807495 | 4.916767e-50 | -8.615850e-47 |
| Msa0082820 | Msa1453670 | 0.807394 | 5.164126e-50 | -8.615850e-47 |
| Msa0089210 | Msa1453670 | 0.831962 | 1.239478e-55 | -8.615850e-47 |
| Msa0102800 | Msa1453670 | 0.822842 | 1.908207e-53 | -8.615850e-47 |
| Msa0105210 | Msa1453670 | 0.810949 | 8.938895e-51 | -8.615850e-47 |
| Msa1354040 | Msa1453670 | 0.836365 | 9.765937e-57 | -8.615850e-47 |
| Msa1373950 | Msa1453670 | 0.809976 | 1.449711e-50 | -8.615850e-47 |
| Msa1375400 | Msa1453670 | 0.806011 | 1.012010e-49 | -8.615850e-47 |
| Msa1407710 | Msa1453670 | 0.830038 | 3.678293e-55 | -8.615850e-47 |
| Msa1412520 | Msa1453670 | 0.816699 | 4.834499e-52 | -8.615850e-47 |
| Msa1418200 | Msa1453670 | 0.808394 | 3.164723e-50 | -8.615850e-47 |
| Msa1429830 | Msa1453670 | 0.837961 | 3.815588e-57 | -8.615850e-47 |
| Msa1430270 | Msa1453670 | 0.814143 | 1.789800e-51 | -8.615850e-47 |
| Msa1435040 | Msa1453670 | 0.856856 | 2.424912e-62 | -8.615850e-47 |
| Msa1435050 | Msa1453670 | 0.826874 | 2.135454e-54 | -8.615850e-47 |
| Msa1435670 | Msa1453670 | 0.837773 | 4.265334e-57 | -8.615850e-47 |
| Msa1438360 | Msa1453670 | 0.806349 | 8.588275e-50 | -8.615850e-47 |
| Msa1439670 | Msa1453670 | 0.854660 | 1.061320e-61 | -8.615850e-47 |
| Msa1439680 | Msa1453670 | 0.800119 | 1.673352e-48 | -8.615850e-47 |
| Msa0604700 | Msa1453670 | 0.818091 | 2.348441e-52 | -8.615850e-47 |
| Msa0609990 | Msa1453670 | 0.811778 | 5.905318e-51 | -8.615850e-47 |
| Msa0619330 | Msa1453670 | 0.845376 | 4.222031e-59 | -8.615850e-47 |
| Msa0621770 | Msa1453670 | 0.827162 | 1.821812e-54 | -8.615850e-47 |
| Msa0621890 | Msa1453670 | 0.809771 | 1.604896e-50 | -8.615850e-47 |
| Msa0641620 | Msa1453670 | 0.802337 | 5.884324e-49 | -8.615850e-47 |
| Msa0643800 | Msa1453670 | 0.807911 | 4.010355e-50 | -8.615850e-47 |
| Msa0645050 | Msa1453670 | 0.802245 | 6.146804e-49 | -8.615850e-47 |
| Msa0648180 | Msa1453670 | 0.822835 | 1.914723e-53 | -8.615850e-47 |
| Msa0648270 | Msa1453670 | 0.808880 | 2.492406e-50 | -8.615850e-47 |
| Msa0661470 | Msa1453670 | 0.803106 | 4.084023e-49 | -8.615850e-47 |
| Msa0667970 | Msa1453670 | 0.813329 | 2.705178e-51 | -8.615850e-47 |
| Msa0678240 | Msa1453670 | 0.806250 | 9.012509e-50 | -8.615850e-47 |
| Msa0678890 | Msa1453670 | 0.830368 | 3.055194e-55 | -8.615850e-47 |
| Msa0682400 | Msa1453670 | 0.805351 | 1.392308e-49 | -8.615850e-47 |
| Msa0683650 | Msa1453670 | 0.829072 | 6.314627e-55 | -8.615850e-47 |
| Msa0684530 | Msa1453670 | 0.802254 | 6.122870e-49 | -8.615850e-47 |
| Msa0685540 | Msa1453670 | 0.825484 | 4.572058e-54 | -8.615850e-47 |
| Msa0690350 | Msa1453670 | 0.818066 | 2.379858e-52 | -8.615850e-47 |
| Msa0691160 | Msa1453670 | 0.818202 | 2.217194e-52 | -8.615850e-47 |
| Msa0698600 | Msa1453670 | 0.815064 | 1.119241e-51 | -8.615850e-47 |
| Msa0707780 | Msa1453670 | 0.838682 | 2.487185e-57 | -8.615850e-47 |
| Msa0709480 | Msa1453670 | 0.800676 | 1.288899e-48 | -8.615850e-47 |
| Msa0720270 | Msa1453670 | 0.818069 | 2.376179e-52 | -8.615850e-47 |
| Msa0730180 | Msa1453670 | 0.804741 | 1.867577e-49 | -8.615850e-47 |
| Msa0740420 | Msa1453670 | 0.817990 | 2.475828e-52 | -8.615850e-47 |
| Msa0756480 | Msa1453670 | 0.812848 | 3.448998e-51 | -8.615850e-47 |
| Msa0760840 | Msa1453670 | 0.808789 | 2.606693e-50 | -8.615850e-47 |
| Msa0760890 | Msa1453670 | 0.831226 | 1.881968e-55 | -8.615850e-47 |
| Msa0770430 | Msa1453670 | 0.820064 | 8.356588e-53 | -8.615850e-47 |
| Msa0790830 | Msa1453670 | 0.805114 | 1.560795e-49 | -8.615850e-47 |
| Msa0792510 | Msa1453670 | 0.812643 | 3.823171e-51 | -8.615850e-47 |
| Msa0802210 | Msa1453670 | 0.805475 | 1.311528e-49 | -8.615850e-47 |
| Msa0808420 | Msa1453670 | 0.804586 | 2.011607e-49 | -8.615850e-47 |
| Msa0820670 | Msa1453670 | 0.828900 | 6.950296e-55 | -8.615850e-47 |
| Msa0835510 | Msa1453670 | 0.802750 | 4.838638e-49 | -8.615850e-47 |
| Msa0122540 | Msa1453670 | 0.800933 | 1.142171e-48 | -8.615850e-47 |
| Msa0125440 | Msa1453670 | 0.806638 | 7.462752e-50 | -8.615850e-47 |
| Msa0130250 | Msa1453670 | 0.802329 | 5.908292e-49 | -8.615850e-47 |
| Msa0134040 | Msa1453670 | 0.912715 | 1.417536e-83 | -8.615850e-47 |
| Msa0135980 | Msa1453670 | 0.802657 | 5.054981e-49 | -8.615850e-47 |
| Msa0141670 | Msa1453670 | 0.813776 | 2.157173e-51 | -8.615850e-47 |
| Msa0147550 | Msa1453670 | 0.846756 | 1.778307e-59 | -8.615850e-47 |
| Msa0149500 | Msa1453670 | 0.822119 | 2.809007e-53 | -8.615850e-47 |
| Msa0159750 | Msa1453670 | 0.801319 | 9.523296e-49 | -8.615850e-47 |
| Msa0162030 | Msa1453670 | 0.812458 | 4.196793e-51 | -8.615850e-47 |
| Msa0162050 | Msa1453670 | 0.804855 | 1.768099e-49 | -8.615850e-47 |
| Msa0162070 | Msa1453670 | 0.816894 | 4.370077e-52 | -8.615850e-47 |
| Msa0168390 | Msa1453670 | 0.816635 | 4.995524e-52 | -8.615850e-47 |
| Msa0170680 | Msa1453670 | 0.818194 | 2.225608e-52 | -8.615850e-47 |
| Msa0171780 | Msa1453670 | 0.822331 | 2.508159e-53 | -8.615850e-47 |
| Msa0171930 | Msa1453670 | 0.818946 | 1.502841e-52 | -8.615850e-47 |
| Msa0181090 | Msa1453670 | 0.943370 | 1.359828e-102 | -8.615850e-47 |
| Msa0194570 | Msa1453670 | 0.805761 | 1.141832e-49 | -8.615850e-47 |
| Msa0207180 | Msa1453670 | 0.812663 | 3.785263e-51 | -8.615850e-47 |
| Msa0213080 | Msa1453670 | 0.823867 | 1.099364e-53 | -8.615850e-47 |
| Msa0217470 | Msa1453670 | 0.830707 | 2.523505e-55 | -8.615850e-47 |
| Msa0219660 | Msa1453670 | 0.824735 | 6.869895e-54 | -8.615850e-47 |
| Msa0227490 | Msa1453670 | 0.812403 | 4.314903e-51 | -8.615850e-47 |
| Msa0227500 | Msa1453670 | 0.820020 | 8.550993e-53 | -8.615850e-47 |
| Msa1226360 | Msa1453670 | 0.812498 | 4.112414e-51 | -8.615850e-47 |
| Msa1226600 | Msa1453670 | 0.817791 | 2.744905e-52 | -8.615850e-47 |
| Msa1229690 | Msa1453670 | 0.802112 | 6.547599e-49 | -8.615850e-47 |
| Msa1232860 | Msa1453670 | 0.813331 | 2.702401e-51 | -8.615850e-47 |
| Msa1238480 | Msa1453670 | 0.837085 | 6.400023e-57 | -8.615850e-47 |
| Msa1254770 | Msa1453670 | 0.839810 | 1.268017e-57 | -8.615850e-47 |
| Msa1254800 | Msa1453670 | 0.833912 | 4.061190e-56 | -8.615850e-47 |
| Msa1281720 | Msa1453670 | 0.806385 | 8.439748e-50 | -8.615850e-47 |
| Msa1287340 | Msa1453670 | 0.803837 | 2.880928e-49 | -8.615850e-47 |
| Msa1295010 | Msa1453670 | 0.831481 | 1.629442e-55 | -8.615850e-47 |
| Msa1302150 | Msa1453670 | 0.824608 | 7.360861e-54 | -8.615850e-47 |
| Msa1305520 | Msa1453670 | 0.802440 | 5.606081e-49 | -8.615850e-47 |
| Msa1321000 | Msa1453670 | 0.830285 | 3.200326e-55 | -8.615850e-47 |
| Msa1325980 | Msa1453670 | 0.802914 | 4.474820e-49 | -8.615850e-47 |
| Msa1326000 | Msa1453670 | 0.829991 | 3.776328e-55 | -8.615850e-47 |
| Msa1329990 | Msa1453670 | 0.836592 | 8.547630e-57 | -8.615850e-47 |
| Msa0367370 | Msa1453670 | 0.808000 | 3.840060e-50 | -8.615850e-47 |
| Msa0371610 | Msa1453670 | 0.806206 | 9.204798e-50 | -8.615850e-47 |
| Msa0382560 | Msa1453670 | 0.840384 | 8.981751e-58 | -8.615850e-47 |
| Msa0413180 | Msa1453670 | 0.825055 | 5.775327e-54 | -8.615850e-47 |
| Msa0413740 | Msa1453670 | 0.825194 | 5.352597e-54 | -8.615850e-47 |
| Msa0418000 | Msa1453670 | 0.811966 | 5.374645e-51 | -8.615850e-47 |
| Msa0427090 | Msa1453670 | 0.825514 | 4.497784e-54 | -8.615850e-47 |
| Msa0436090 | Msa1453670 | 0.805983 | 1.025662e-49 | -8.615850e-47 |
| Msa0450460 | Msa1453670 | 0.808390 | 3.170869e-50 | -8.615850e-47 |
| Msa0458110 | Msa1453670 | 0.819753 | 9.843809e-53 | -8.615850e-47 |
| Msa0458790 | Msa1453670 | 0.803727 | 3.036301e-49 | -8.615850e-47 |
| Msa0458830 | Msa1453670 | 0.801669 | 8.074870e-49 | -8.615850e-47 |
| Msa0465860 | Msa1453670 | 0.804740 | 1.868024e-49 | -8.615850e-47 |
| Msa0473490 | Msa1453670 | 0.807349 | 5.278624e-50 | -8.615850e-47 |
| Msa0981730 | Msa1453670 | 0.800051 | 1.727609e-48 | -8.615850e-47 |
| Msa0981740 | Msa1453670 | 0.831471 | 1.638648e-55 | -8.615850e-47 |
| Msa1018720 | Msa1453670 | 0.802940 | 4.419925e-49 | -8.615850e-47 |
| Msa1024140 | Msa1453670 | 0.829194 | 5.900232e-55 | -8.615850e-47 |
| Msa1027790 | Msa1453670 | 0.822522 | 2.264705e-53 | -8.615850e-47 |
| Msa1028460 | Msa1453670 | 0.802819 | 4.682160e-49 | -8.615850e-47 |
| Msa1032350 | Msa1453670 | 0.806300 | 8.794905e-50 | -8.615850e-47 |
| Msa1055260 | Msa1453670 | 0.807035 | 6.153088e-50 | -8.615850e-47 |
| Msa1055280 | Msa1453670 | 0.814580 | 1.432903e-51 | -8.615850e-47 |
| Msa1061180 | Msa1453670 | 0.802271 | 6.071117e-49 | -8.615850e-47 |
| Msa1072080 | Msa1453670 | 0.810559 | 1.085123e-50 | -8.615850e-47 |
| Msa1072350 | Msa1453670 | 0.807073 | 6.040539e-50 | -8.615850e-47 |
| Msa1080430 | Msa1453670 | 0.818704 | 1.705495e-52 | -8.615850e-47 |
| Msa1080460 | Msa1453670 | 0.828011 | 1.139129e-54 | -8.615850e-47 |
| Msa1080470 | Msa1453670 | 0.816900 | 4.357177e-52 | -8.615850e-47 |
| Msa1081700 | Msa1453670 | 0.812541 | 4.026091e-51 | -8.615850e-47 |
| Msa1105290 | Msa1453670 | 0.803003 | 4.288600e-49 | -8.615850e-47 |
| Msa1106560 | Msa1453670 | 0.833136 | 6.343692e-56 | -8.615850e-47 |
| Msa0243570 | Msa1453670 | 0.802305 | 5.975723e-49 | -8.615850e-47 |
| Msa0257130 | Msa1453670 | 0.810529 | 1.101671e-50 | -8.615850e-47 |
| Msa0258380 | Msa1453670 | 0.816720 | 4.780096e-52 | -8.615850e-47 |
| Msa0260960 | Msa1453670 | 0.836379 | 9.685683e-57 | -8.615850e-47 |
| Msa0260970 | Msa1453670 | 0.861975 | 7.029220e-64 | -8.615850e-47 |
| Msa0281570 | Msa1453670 | 0.801217 | 9.990565e-49 | -8.615850e-47 |
| Msa0290950 | Msa1453670 | 0.833841 | 4.228881e-56 | -8.615850e-47 |
| Msa0290970 | Msa1453670 | 0.831542 | 1.573795e-55 | -8.615850e-47 |
| Msa0295520 | Msa1453670 | 0.830147 | 3.459185e-55 | -8.615850e-47 |
| Msa0296610 | Msa1453670 | 0.827912 | 1.203650e-54 | -8.615850e-47 |
| Msa0301180 | Msa1453670 | 0.803448 | 3.469093e-49 | -8.615850e-47 |
| Msa0314790 | Msa1453670 | 0.810534 | 1.098938e-50 | -8.615850e-47 |
| Msa0315480 | Msa1453670 | 0.817235 | 3.663815e-52 | -8.615850e-47 |
| Msa0320540 | Msa1453670 | 0.814099 | 1.830503e-51 | -8.615850e-47 |
| Msa0331780 | Msa1453670 | 0.847651 | 1.010373e-59 | -8.615850e-47 |
| Msa0334980 | Msa1453670 | 0.805248 | 1.463004e-49 | -8.615850e-47 |
| Msa0344070 | Msa1453670 | 0.810684 | 1.019780e-50 | -8.615850e-47 |
| Msa0350020 | Msa1453670 | 0.824786 | 6.683726e-54 | -8.615850e-47 |
| Msa0352200 | Msa1453670 | 0.823676 | 1.218380e-53 | -8.615850e-47 |
| Msa1107970 | Msa1453670 | 0.831862 | 1.312078e-55 | -8.615850e-47 |
| Msa1112610 | Msa1453670 | 0.828667 | 7.916040e-55 | -8.615850e-47 |
| Msa1125780 | Msa1453670 | 0.810892 | 9.195119e-51 | -8.615850e-47 |
| Msa1125950 | Msa1453670 | 0.809639 | 1.713507e-50 | -8.615850e-47 |
| Msa1126170 | Msa1453670 | 0.802927 | 4.447538e-49 | -8.615850e-47 |
| Msa1130650 | Msa1453670 | 0.811557 | 6.596087e-51 | -8.615850e-47 |
| Msa1149760 | Msa1453670 | 0.800115 | 1.677062e-48 | -8.615850e-47 |
| Msa1151960 | Msa1453670 | 0.832141 | 1.119537e-55 | -8.615850e-47 |
| Msa1159100 | Msa1453670 | 0.810714 | 1.004775e-50 | -8.615850e-47 |
| Msa1167000 | Msa1453670 | 0.814680 | 1.362018e-51 | -8.615850e-47 |
| Msa1171340 | Msa1453670 | 0.808041 | 3.762643e-50 | -8.615850e-47 |
| Msa1186210 | Msa1453670 | 0.826480 | 2.650262e-54 | -8.615850e-47 |
| Msa1201990 | Msa1453670 | 0.840942 | 6.416428e-58 | -8.615850e-47 |
| Msa1220230 | Msa1453670 | 0.802788 | 4.751303e-49 | -8.615850e-47 |
| Msa1221260 | Msa1453670 | 0.818252 | 2.159472e-52 | -8.615850e-47 |
| Msa0504730 | Msa1453670 | 0.836196 | 1.078053e-56 | -8.615850e-47 |
| Msa0505390 | Msa1453670 | 0.820139 | 8.030852e-53 | -8.615850e-47 |
| Msa0506760 | Msa1453670 | 0.803830 | 2.890381e-49 | -8.615850e-47 |
| Msa0517300 | Msa1453670 | 0.826624 | 2.449483e-54 | -8.615850e-47 |
| Msa0524050 | Msa1453670 | 0.816276 | 6.011855e-52 | -8.615850e-47 |
| Msa0525240 | Msa1453670 | 0.841765 | 3.896903e-58 | -8.615850e-47 |
| Msa0530930 | Msa1453670 | 0.811607 | 6.433162e-51 | -8.615850e-47 |
| Msa0532840 | Msa1453670 | 0.804257 | 2.355667e-49 | -8.615850e-47 |
| Msa0543850 | Msa1453670 | 0.822317 | 2.526978e-53 | -8.615850e-47 |
| Msa0554420 | Msa1453670 | 0.819177 | 1.331885e-52 | -8.615850e-47 |
| Msa0564460 | Msa1453670 | 0.817713 | 2.858796e-52 | -8.615850e-47 |
| Msa0574170 | Msa1453670 | 0.849830 | 2.512968e-60 | -8.615850e-47 |
| Msa0575250 | Msa1453670 | 0.858892 | 6.028778e-63 | -8.615850e-47 |
| Msa0576420 | Msa1453670 | 0.843051 | 1.777518e-58 | -8.615850e-47 |
| Msa0581340 | Msa1453670 | 0.818604 | 1.797442e-52 | -8.615850e-47 |
| Msa0601110 | Msa1453670 | 0.801411 | 9.120150e-49 | -8.615850e-47 |
| Msa0843290 | Msa1453670 | 0.825513 | 4.499963e-54 | -8.615850e-47 |
| Msa0855020 | Msa1453670 | 0.807284 | 5.448641e-50 | -8.615850e-47 |
| Msa0863250 | Msa1453670 | 0.803104 | 4.087208e-49 | -8.615850e-47 |
| Msa0909710 | Msa1453670 | 0.802067 | 6.687653e-49 | -8.615850e-47 |
| Msa0925160 | Msa1453670 | 0.804189 | 2.433679e-49 | -8.615850e-47 |
| Msa0930330 | Msa1453670 | 0.819089 | 1.394605e-52 | -8.615850e-47 |
| Msa0937940 | Msa1453670 | 0.800338 | 1.510730e-48 | -8.615850e-47 |
| Msa0951460 | Msa1453670 | 0.813973 | 1.951182e-51 | -8.615850e-47 |
| Msa0951960 | Msa1453670 | 0.810114 | 1.354160e-50 | -8.615850e-47 |
| Msa0977320 | Msa1453670 | 0.806654 | 7.405251e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1453670 | MtrunA17_Chr1g0203671 | 98.737 | 792 | 10 | 0 | 1 | 792 | 1 | 792 | 0.0 | 1618 |
| Msa1453670 | MtrunA17_Chr8g0350321 | 65.272 | 789 | 242 | 13 | 14 | 790 | 39 | 807 | 0.0 | 1001 |
| Msa1453670 | MtrunA17_Chr7g0246631 | 66.074 | 731 | 215 | 10 | 69 | 790 | 69 | 775 | 0.0 | 978 |
| Msa1453670 | MtrunA17_Chr6g0472471 | 58.344 | 773 | 295 | 12 | 34 | 792 | 9 | 768 | 0.0 | 882 |
| Msa1453670 | MtrunA17_Chr2g0322731 | 53.678 | 734 | 301 | 10 | 60 | 789 | 67 | 765 | 0.0 | 740 |
| Msa1453670 | MtrunA17_Chr4g0024351 | 51.907 | 734 | 317 | 11 | 60 | 789 | 28 | 729 | 0.0 | 730 |
| Msa1453670 | MtrunA17_Chr6g0481041 | 46.133 | 724 | 349 | 15 | 86 | 789 | 21 | 723 | 0.0 | 628 |
| Msa1453670 | MtrunA17_Chr5g0410711 | 41.430 | 741 | 401 | 17 | 63 | 789 | 57 | 778 | 0.0 | 586 |
| Msa1453670 | MtrunA17_Chr2g0331581 | 41.954 | 696 | 350 | 11 | 99 | 789 | 143 | 789 | 0.0 | 564 |
| Msa1453670 | MtrunA17_Chr5g0394111 | 37.158 | 732 | 356 | 12 | 68 | 789 | 9 | 646 | 5.51e-155 | 466 |
| Msa1453670 | MtrunA17_Chr7g0224451 | 40.755 | 503 | 216 | 14 | 94 | 587 | 15 | 444 | 1.20e-113 | 352 |
| Msa1453670 | MtrunA17_Chr2g0292731 | 32.302 | 517 | 322 | 12 | 286 | 789 | 47 | 548 | 1.07e-86 | 285 |
| Msa1453670 | MtrunA17_Chr2g0292741 | 31.384 | 513 | 327 | 11 | 286 | 789 | 39 | 535 | 7.82e-82 | 271 |
| Msa1453670 | MtrunA17_Chr7g0224481 | 38.817 | 389 | 167 | 10 | 94 | 475 | 15 | 339 | 1.18e-77 | 254 |
| Msa1453670 | MtrunA17_Chr7g0224491 | 44.923 | 325 | 134 | 10 | 478 | 789 | 1 | 293 | 9.94e-75 | 244 |
| Msa1453670 | MtrunA17_Chr2g0292761 | 29.839 | 620 | 347 | 18 | 176 | 789 | 3 | 540 | 1.17e-70 | 242 |
| Msa1453670 | MtrunA17_Chr5g0419821 | 55.118 | 127 | 56 | 1 | 90 | 215 | 28 | 154 | 4.54e-42 | 151 |
| Msa1453670 | MtrunA17_Chr2g0319671 | 31.801 | 261 | 133 | 5 | 301 | 526 | 18 | 268 | 1.03e-35 | 137 |
| Msa1453670 | MtrunA17_Chr2g0319681 | 36.017 | 236 | 135 | 6 | 559 | 789 | 1 | 225 | 3.47e-32 | 125 |
| Msa1453670 | MtrunA17_Chr2g0319701 | 35.146 | 239 | 131 | 8 | 559 | 789 | 1 | 223 | 4.28e-30 | 119 |
| Msa1453670 | MtrunA17_Chr1g0205981 | 32.110 | 218 | 110 | 5 | 150 | 359 | 1 | 188 | 2.91e-24 | 101 |
| Msa1453670 | MtrunA17_Chr2g0319691 | 39.062 | 128 | 70 | 3 | 414 | 539 | 1 | 122 | 8.91e-23 | 95.5 |
| Msa1453670 | MtrunA17_Chr7g0224461 | 45.312 | 128 | 46 | 4 | 674 | 790 | 1 | 115 | 1.72e-21 | 90.5 |
| Msa1453670 | MtrunA17_Chr2g0304191 | 28.244 | 131 | 93 | 1 | 309 | 438 | 1 | 131 | 9.32e-16 | 74.7 |
| Msa1453670 | MtrunA17_Chr1g0179581 | 39.326 | 89 | 44 | 3 | 91 | 172 | 24 | 109 | 7.35e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1453670 | AT4G00730.1 | 63.108 | 740 | 239 | 9 | 51 | 790 | 94 | 799 | 0.0 | 917 |
| Msa1453670 | AT3G61150.1 | 58.313 | 818 | 272 | 15 | 1 | 789 | 26 | 803 | 0.0 | 904 |
| Msa1453670 | AT4G04890.2 | 53.117 | 738 | 318 | 12 | 54 | 789 | 24 | 735 | 0.0 | 769 |
| Msa1453670 | AT4G04890.1 | 53.117 | 738 | 318 | 12 | 54 | 789 | 24 | 735 | 0.0 | 769 |
| Msa1453670 | AT5G52170.3 | 51.905 | 761 | 276 | 14 | 40 | 791 | 1 | 680 | 0.0 | 748 |
| Msa1453670 | AT5G52170.1 | 51.905 | 761 | 276 | 14 | 40 | 791 | 1 | 680 | 0.0 | 748 |
| Msa1453670 | AT1G05230.8 | 51.701 | 735 | 303 | 12 | 59 | 789 | 30 | 716 | 0.0 | 743 |
| Msa1453670 | AT1G05230.4 | 51.701 | 735 | 303 | 12 | 59 | 789 | 30 | 716 | 0.0 | 743 |
| Msa1453670 | AT1G05230.9 | 51.701 | 735 | 303 | 12 | 59 | 789 | 30 | 716 | 0.0 | 743 |
| Msa1453670 | AT1G05230.10 | 51.701 | 735 | 303 | 12 | 59 | 789 | 30 | 716 | 0.0 | 743 |
| Msa1453670 | AT1G05230.7 | 51.701 | 735 | 303 | 12 | 59 | 789 | 30 | 716 | 0.0 | 743 |
| Msa1453670 | AT1G05230.11 | 51.701 | 735 | 303 | 12 | 59 | 789 | 30 | 716 | 0.0 | 743 |
| Msa1453670 | AT1G05230.2 | 51.701 | 735 | 303 | 12 | 59 | 789 | 30 | 716 | 0.0 | 743 |
| Msa1453670 | AT1G05230.6 | 51.701 | 735 | 303 | 12 | 59 | 789 | 30 | 716 | 0.0 | 743 |
| Msa1453670 | AT1G05230.5 | 51.701 | 735 | 303 | 12 | 59 | 789 | 30 | 716 | 0.0 | 743 |
| Msa1453670 | AT1G05230.1 | 51.701 | 735 | 303 | 12 | 59 | 789 | 30 | 716 | 0.0 | 743 |
| Msa1453670 | AT5G52170.2 | 51.305 | 766 | 278 | 14 | 40 | 791 | 1 | 685 | 0.0 | 741 |
| Msa1453670 | AT1G05230.3 | 51.565 | 735 | 302 | 13 | 59 | 789 | 30 | 714 | 0.0 | 735 |
| Msa1453670 | AT4G21750.2 | 50.986 | 761 | 321 | 14 | 54 | 789 | 24 | 757 | 0.0 | 734 |
| Msa1453670 | AT4G21750.1 | 50.986 | 761 | 321 | 14 | 54 | 789 | 24 | 757 | 0.0 | 734 |
| Msa1453670 | AT4G21750.3 | 50.986 | 761 | 321 | 14 | 54 | 789 | 24 | 757 | 0.0 | 734 |
| Msa1453670 | AT4G21750.4 | 50.986 | 761 | 321 | 14 | 54 | 789 | 24 | 757 | 0.0 | 734 |
| Msa1453670 | AT1G73360.1 | 46.273 | 711 | 339 | 14 | 94 | 789 | 31 | 713 | 0.0 | 607 |
| Msa1453670 | AT1G05230.12 | 50.487 | 616 | 264 | 11 | 54 | 665 | 25 | 603 | 0.0 | 607 |
| Msa1453670 | AT4G00730.2 | 60.852 | 493 | 166 | 7 | 51 | 543 | 94 | 559 | 0.0 | 592 |
| Msa1453670 | AT1G17920.2 | 44.587 | 702 | 335 | 14 | 98 | 789 | 24 | 681 | 0.0 | 586 |
| Msa1453670 | AT1G17920.1 | 44.587 | 702 | 335 | 14 | 98 | 789 | 24 | 681 | 0.0 | 586 |
| Msa1453670 | AT2G32370.1 | 40.028 | 727 | 377 | 12 | 70 | 786 | 40 | 717 | 0.0 | 546 |
| Msa1453670 | AT1G79840.3 | 39.860 | 715 | 358 | 15 | 87 | 791 | 34 | 686 | 1.50e-177 | 526 |
| Msa1453670 | AT1G79840.6 | 39.860 | 715 | 358 | 15 | 87 | 791 | 34 | 686 | 1.50e-177 | 526 |
| Msa1453670 | AT1G79840.1 | 39.860 | 715 | 358 | 15 | 87 | 791 | 92 | 744 | 4.83e-177 | 527 |
| Msa1453670 | AT1G79840.2 | 39.691 | 713 | 362 | 14 | 87 | 791 | 121 | 773 | 6.04e-176 | 525 |
| Msa1453670 | AT5G46880.3 | 39.730 | 740 | 391 | 18 | 79 | 789 | 93 | 806 | 1.36e-171 | 516 |
| Msa1453670 | AT5G46880.1 | 39.730 | 740 | 391 | 18 | 79 | 789 | 93 | 806 | 1.36e-171 | 516 |
| Msa1453670 | AT5G46880.2 | 39.730 | 740 | 391 | 18 | 79 | 789 | 93 | 806 | 1.36e-171 | 516 |
| Msa1453670 | AT4G25530.1 | 39.028 | 720 | 367 | 15 | 76 | 789 | 29 | 682 | 8.91e-165 | 493 |
| Msa1453670 | AT1G79840.4 | 40.000 | 585 | 285 | 13 | 87 | 661 | 92 | 620 | 4.77e-143 | 435 |
| Msa1453670 | AT3G03260.1 | 34.060 | 734 | 415 | 17 | 79 | 789 | 7 | 694 | 1.30e-136 | 421 |
| Msa1453670 | AT4G17710.1 | 34.907 | 699 | 368 | 16 | 95 | 789 | 88 | 703 | 2.41e-129 | 402 |
| Msa1453670 | AT5G17320.1 | 34.008 | 741 | 439 | 22 | 74 | 790 | 2 | 716 | 2.77e-122 | 384 |
| Msa1453670 | AT1G34650.1 | 32.642 | 723 | 440 | 16 | 85 | 789 | 12 | 705 | 1.61e-113 | 361 |
| Msa1453670 | AT3G03260.2 | 33.692 | 558 | 329 | 13 | 79 | 627 | 7 | 532 | 1.01e-101 | 325 |
| Msa1453670 | AT1G79840.5 | 38.013 | 463 | 223 | 11 | 87 | 540 | 92 | 499 | 7.70e-99 | 317 |
| Msa1453670 | AT5G07260.1 | 25.841 | 565 | 335 | 16 | 160 | 722 | 9 | 491 | 8.98e-49 | 181 |
| Msa1453670 | AT5G07260.2 | 26.018 | 565 | 329 | 16 | 160 | 722 | 9 | 486 | 1.24e-48 | 181 |
| Msa1453670 | AT1G30490.1 | 37.255 | 102 | 55 | 3 | 81 | 178 | 6 | 102 | 4.55e-11 | 67.0 |
Find 239 sgRNAs with CRISPR-Local
Find 359 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCGTCCGTTGCTTATTTC+TGG | 0.113009 | tig0034871:+5032 | Msa1453670:CDS |
| CCGTTGCTTATTTCTGGTTT+TGG | 0.171502 | tig0034871:+5038 | Msa1453670:CDS |
| GGTGCTCTTCGAACAATATT+TGG | 0.196521 | tig0034871:-3123 | Msa1453670:intergenic |
| AGATAGTCCTGTTTGGATTA+AGG | 0.217419 | tig0034871:+3492 | Msa1453670:CDS |
| GAAGACTATTCACCAGAATT+TGG | 0.222863 | tig0034871:-6102 | Msa1453670:intergenic |
| GTGCTTCATCTGCCAGAAAA+TGG | 0.229968 | tig0034871:+5329 | Msa1453670:CDS |
| TCACCATTGCATTAACAAAA+TGG | 0.248222 | tig0034871:-6225 | Msa1453670:intergenic |
| AAAATAAACAAGTCAAATTC+TGG | 0.263814 | tig0034871:+2702 | Msa1453670:CDS |
| CCACCACAGTTGTTGCATAT+TGG | 0.272733 | tig0034871:-3085 | Msa1453670:intergenic |
| GATAGTCCTGTTTGGATTAA+GGG | 0.278755 | tig0034871:+3493 | Msa1453670:CDS |
| TTTGATCTTGAAGGAATATC+TGG | 0.281916 | tig0034871:+2427 | Msa1453670:CDS |
| ATGACCAACAACTTCTGTTC+TGG | 0.284388 | tig0034871:+5301 | Msa1453670:CDS |
| ATTTAATACTCACCTTCATT+TGG | 0.297931 | tig0034871:-2742 | Msa1453670:intergenic |
| CAGAACAGACACATATGTTT+TGG | 0.300815 | tig0034871:-6511 | Msa1453670:intergenic |
| GGATTAGCCAATGATGATAT+TGG | 0.305207 | tig0034871:-3223 | Msa1453670:intergenic |
| TCCTGTTTGGATTAAGGGCT+TGG | 0.312251 | tig0034871:+3498 | Msa1453670:CDS |
| GACAAGTCTTGCAACCTTAC+AGG | 0.315039 | tig0034871:-2100 | Msa1453670:intergenic |
| CACAGTCGGATTCCAAATTC+TGG | 0.317732 | tig0034871:+6090 | Msa1453670:CDS |
| TATGTTGCACTCTTGCCTTC+AGG | 0.326578 | tig0034871:+5968 | Msa1453670:CDS |
| TCAAGCTCTTGAATTTGATT+AGG | 0.330233 | tig0034871:-2514 | Msa1453670:intergenic |
| TTGGATTTGGCGCTCATAGA+TGG | 0.334166 | tig0034871:+5057 | Msa1453670:CDS |
| CGGTTGATTTCTTCTTGTAT+TGG | 0.335981 | tig0034871:+3559 | Msa1453670:CDS |
| GCGACAAAACCAGCGGGTTT+AGG | 0.336378 | tig0034871:-3583 | Msa1453670:intergenic |
| AACAGTCTTTGTCTTGAAAC+TGG | 0.339604 | tig0034871:-5469 | Msa1453670:intergenic |
| TCTCAATACTGACAAGAAAT+TGG | 0.342826 | tig0034871:+1568 | Msa1453670:five_prime_UTR |
| GGTTATACATTTGGTTGTAT+AGG | 0.343855 | tig0034871:+6309 | Msa1453670:three_prime_UTR |
| GTCACTGTTCTTGCTGTTGT+GGG | 0.345979 | tig0034871:+1644 | Msa1453670:five_prime_UTR |
| CCAAGCCTTCACACTGCCTT+TGG | 0.351820 | tig0034871:-5091 | Msa1453670:intergenic |
| GCTCTACCATCCTCAAATTC+TGG | 0.354909 | tig0034871:+3250 | Msa1453670:CDS |
| TTTAATACTCACCTTCATTT+GGG | 0.357417 | tig0034871:-2741 | Msa1453670:intergenic |
| GTTTCCTTGCCCTTGACCTT+TGG | 0.362517 | tig0034871:-5575 | Msa1453670:intergenic |
| TGAGAAAGGGGTTATACATT+TGG | 0.376965 | tig0034871:+6300 | Msa1453670:three_prime_UTR |
| ATGAATGGTTGTGCATTAGA+AGG | 0.380812 | tig0034871:-4127 | Msa1453670:intergenic |
| ACGATACCGGGAGGCTCGCC+AGG | 0.388787 | tig0034871:-5418 | Msa1453670:intergenic |
| TAGTTCACCAATGGGATTGA+TGG | 0.393674 | tig0034871:+3381 | Msa1453670:CDS |
| AATATTTGGCCAGGAATTGC+TGG | 0.396823 | tig0034871:-3109 | Msa1453670:intergenic |
| AGCAGCATGCAGAAGGTGTA+TGG | 0.397562 | tig0034871:+4068 | Msa1453670:CDS |
| AAGATAAAAGTCTTGTTTGT+GGG | 0.399676 | tig0034871:+1786 | Msa1453670:five_prime_UTR |
| TTCAATGATTGCCCGTCAAC+TGG | 0.404111 | tig0034871:-5917 | Msa1453670:intergenic |
| TGTTTGTTAAGGCACATATA+CGG | 0.406272 | tig0034871:-3186 | Msa1453670:intergenic |
| GCCAAGGAACTTGTTTGTTA+AGG | 0.406883 | tig0034871:-3197 | Msa1453670:intergenic |
| AACTGACTCCATTGTGAGCT+TGG | 0.411048 | tig0034871:-6131 | Msa1453670:intergenic |
| GGTATCGGAAGGAACGGTTT+TGG | 0.412783 | tig0034871:+3283 | Msa1453670:CDS |
| TGACCAACAACTTCTGTTCT+GGG | 0.413733 | tig0034871:+5302 | Msa1453670:CDS |
| AGATCTTGCATTGGCTGCTA+TGG | 0.415072 | tig0034871:+3444 | Msa1453670:CDS |
| TGTGGTGGACCAGCAATTCC+TGG | 0.416505 | tig0034871:+3100 | Msa1453670:CDS |
| CTCGGCAATCCTTTGCCAAT+GGG | 0.418291 | tig0034871:+3322 | Msa1453670:CDS |
| CTCAGACAGATAGTCCTGTT+TGG | 0.418832 | tig0034871:+3485 | Msa1453670:CDS |
| AAGAAATGGTGCTATACATT+TGG | 0.420804 | tig0034871:+3894 | Msa1453670:CDS |
| TTTGTTGAATCAGACTCAAC+TGG | 0.422317 | tig0034871:+2979 | Msa1453670:intron |
| AGGATTCTCACTTGACGAAC+CGG | 0.422609 | tig0034871:-4034 | Msa1453670:intergenic |
| CTTACCTTGGAGTAACCATT+TGG | 0.423156 | tig0034871:-4193 | Msa1453670:intergenic |
| GTTGATGTTTCTGTTGAGAT+TGG | 0.423253 | tig0034871:+4097 | Msa1453670:CDS |
| AGCCTTCACACTGCCTTTGG+AGG | 0.424623 | tig0034871:-5088 | Msa1453670:intergenic |
| CATCACTCAGAGTCCCCATT+TGG | 0.425038 | tig0034871:-5360 | Msa1453670:intergenic |
| TTACAGTTGCAACTTGCAAA+TGG | 0.427475 | tig0034871:+6550 | Msa1453670:three_prime_UTR |
| TGCTTCATCTGCCAGAAAAT+GGG | 0.429726 | tig0034871:+5330 | Msa1453670:CDS |
| AATTGAAAACGCTCGTCTAA+AGG | 0.433147 | tig0034871:+3153 | Msa1453670:CDS |
| GCTGAAGCTACGAGAGAAAC+CGG | 0.433814 | tig0034871:+3604 | Msa1453670:CDS |
| AAAGTGATAGTGACGATTGC+TGG | 0.435596 | tig0034871:+1946 | Msa1453670:five_prime_UTR |
| TGTATAGGAAAGGTTGCTTA+AGG | 0.438143 | tig0034871:+6324 | Msa1453670:three_prime_UTR |
| TCCTTCTGGCTGTATTGTGC+AGG | 0.438832 | tig0034871:+4165 | Msa1453670:CDS |
| TTAGCGCTGCAACATCTGTT+TGG | 0.439034 | tig0034871:+5443 | Msa1453670:CDS |
| TCAAATTCTGGTCTGGAACT+TGG | 0.441450 | tig0034871:+3262 | Msa1453670:CDS |
| AGCTTAGATACTGGTCTGCT+TGG | 0.441475 | tig0034871:+2358 | Msa1453670:CDS |
| AGCGATAACTTTGATCTTGA+AGG | 0.443275 | tig0034871:+2418 | Msa1453670:CDS |
| TCTGGCTACGGCTTGTCAAA+TGG | 0.446656 | tig0034871:+6022 | Msa1453670:CDS |
| ATGGAGGGGCAGAGTGAGAT+TGG | 0.448707 | tig0034871:+2322 | Msa1453670:CDS |
| TACAGTTGCAACTTGCAAAT+GGG | 0.451118 | tig0034871:+6551 | Msa1453670:three_prime_UTR |
| TGTCACTGTTCTTGCTGTTG+TGG | 0.451766 | tig0034871:+1643 | Msa1453670:five_prime_UTR |
| AAGATCAAAGTTATCGCTTC+CGG | 0.452078 | tig0034871:-2413 | Msa1453670:intergenic |
| AGCACTTGTGGAAACTTTGA+TGG | 0.452399 | tig0034871:+3648 | Msa1453670:CDS |
| ACCATCCTCAAATTCTGGTC+TGG | 0.453392 | tig0034871:+3255 | Msa1453670:CDS |
| TCCAAGCCCTTAATCCAAAC+AGG | 0.457877 | tig0034871:-3499 | Msa1453670:intergenic |
| GAAGCATGTGTGAACCTTGT+TGG | 0.458837 | tig0034871:+1678 | Msa1453670:five_prime_UTR |
| GGTGGTGCTGGCGATGGTGG+TGG | 0.459096 | tig0034871:+6058 | Msa1453670:CDS |
| AAAATGGGACAGCCTCCAAA+TGG | 0.459225 | tig0034871:+5345 | Msa1453670:CDS |
| ACATGCTTCTTCTACCAGCT+TGG | 0.460496 | tig0034871:-5261 | Msa1453670:intergenic |
| CAAAGTTATCGCTTCCGGAC+CGG | 0.465356 | tig0034871:-2408 | Msa1453670:intergenic |
| TGGCAAACCAATATCATCAT+TGG | 0.472028 | tig0034871:+3216 | Msa1453670:CDS |
| GTTTGGATTAAGGGCTTGGA+TGG | 0.472664 | tig0034871:+3502 | Msa1453670:CDS |
| TGTTGATTCTGCAAGAAACT+TGG | 0.473065 | tig0034871:+5861 | Msa1453670:CDS |
| AGGAATATCTGGTGATGATC+AGG | 0.473094 | tig0034871:+2438 | Msa1453670:CDS |
| AATCAACAGTTTAGCACTTG+TGG | 0.473233 | tig0034871:+3636 | Msa1453670:CDS |
| CCTCGGCAATCCTTTGCCAA+TGG | 0.475104 | tig0034871:+3321 | Msa1453670:CDS |
| GGCTTTGCAATTGTTCCTGA+TGG | 0.475420 | tig0034871:+5989 | Msa1453670:CDS |
| TTGCCAATGGGACTTGATCT+CGG | 0.479358 | tig0034871:+3334 | Msa1453670:CDS |
| GCCTTAACAAACAAGTTCCT+TGG | 0.480879 | tig0034871:+3196 | Msa1453670:CDS |
| TACATTTGGTTGTATAGGAA+AGG | 0.481183 | tig0034871:+6314 | Msa1453670:three_prime_UTR |
| TGCAGCGCTAAGCACGATAC+CGG | 0.481258 | tig0034871:-5431 | Msa1453670:intergenic |
| AGCAAGAACAGTGACACATA+AGG | 0.481995 | tig0034871:-1636 | Msa1453670:intergenic |
| GCCTTCACACTGCCTTTGGA+GGG | 0.482232 | tig0034871:-5087 | Msa1453670:intergenic |
| AAGTTCCAGACCAGAATTTG+AGG | 0.483874 | tig0034871:-3260 | Msa1453670:intergenic |
| GGTGGTGGTTCAAGCTCCCT+CGG | 0.484315 | tig0034871:+3304 | Msa1453670:CDS |
| GCAAGAACAGTGACACATAA+GGG | 0.484327 | tig0034871:-1635 | Msa1453670:intergenic |
| GATGACCCTGGCGAGCCTCC+CGG | 0.485077 | tig0034871:+5412 | Msa1453670:CDS |
| TAGGAAAGGTTGCTTAAGGA+AGG | 0.486319 | tig0034871:+6328 | Msa1453670:three_prime_UTR |
| AGGAAAATGACAAGCTAAGA+GGG | 0.487415 | tig0034871:+3029 | Msa1453670:CDS |
| GTGGTGTATGCACCAGTTGA+CGG | 0.489013 | tig0034871:+5905 | Msa1453670:CDS |
| AAATGGGACAGCCTCCAAAT+GGG | 0.489875 | tig0034871:+5346 | Msa1453670:CDS |
| AGGTCACTTGGATTGAGCAC+TGG | 0.495140 | tig0034871:+4979 | Msa1453670:intron |
| GCTTAGATACTGGTCTGCTT+GGG | 0.495575 | tig0034871:+2359 | Msa1453670:CDS |
| AGCTGTAGAAGACTTCCTTC+TGG | 0.496424 | tig0034871:+4151 | Msa1453670:CDS |
| TTGCATTGTTGTAGGTCACT+TGG | 0.496497 | tig0034871:+4967 | Msa1453670:intron |
| ACAGTTGATAAGAAAGAAGA+TGG | 0.497161 | tig0034871:-2162 | Msa1453670:intergenic |
| ACTGTTGATTATTACTATCC+CGG | 0.497411 | tig0034871:-3623 | Msa1453670:intergenic |
| GGTAATGATCCCTCTGGCTA+CGG | 0.497673 | tig0034871:+6010 | Msa1453670:CDS |
| CCTGGTATTAGTTCACCAAT+GGG | 0.499291 | tig0034871:+3373 | Msa1453670:CDS |
| CCAAAGGCAGTGTGAAGGCT+TGG | 0.499979 | tig0034871:+5091 | Msa1453670:CDS |
| TTTGCAAGTTGCAACTGTAA+AGG | 0.500669 | tig0034871:-6547 | Msa1453670:intergenic |
| GGATTCTCACTTGACGAACC+GGG | 0.501488 | tig0034871:-4033 | Msa1453670:intergenic |
| TGATGTTCAGCTTGAGAGAT+CGG | 0.502609 | tig0034871:+3414 | Msa1453670:CDS |
| GATGAGTATGAAAGCCGGTC+CGG | 0.502821 | tig0034871:+2394 | Msa1453670:CDS |
| CCCATTGGTGAACTAATACC+AGG | 0.505164 | tig0034871:-3373 | Msa1453670:intergenic |
| CACTCAGAGTCCCCATTTGG+AGG | 0.506413 | tig0034871:-5357 | Msa1453670:intergenic |
| AAAGATAAAAGTCTTGTTTG+TGG | 0.507627 | tig0034871:+1785 | Msa1453670:five_prime_UTR |
| ACTGGTGATAGCTTAGATAC+TGG | 0.508547 | tig0034871:+2349 | Msa1453670:CDS |
| TCAAATGGTACTTTACAGAA+AGG | 0.510605 | tig0034871:+6037 | Msa1453670:CDS |
| TTCACACTGCCTTTGGAGGG+TGG | 0.511667 | tig0034871:-5084 | Msa1453670:intergenic |
| CAGAGTGAGATTGGTCTCAC+TGG | 0.512660 | tig0034871:+2331 | Msa1453670:CDS |
| AGTCTTCTACAGCTTATGAA+TGG | 0.512664 | tig0034871:-4142 | Msa1453670:intergenic |
| TTCGTCAAGTGAGAATCCTT+CGG | 0.514988 | tig0034871:+4038 | Msa1453670:CDS |
| TATGGATGAATTATTAAAGA+TGG | 0.515193 | tig0034871:+3462 | Msa1453670:CDS |
| TGAGAACATAATGCTTAGGC+AGG | 0.515881 | tig0034871:+3009 | Msa1453670:CDS |
| ATTGCTTTCACCACTAGTCC+CGG | 0.516885 | tig0034871:+4015 | Msa1453670:CDS |
| AGTTCACCAATGGGATTGAT+GGG | 0.519574 | tig0034871:+3382 | Msa1453670:CDS |
| TCTTAGCAAGAGACTTGGCT+TGG | 0.520649 | tig0034871:+2679 | Msa1453670:CDS |
| TAGAAGAAGCATGTTGAAGC+TGG | 0.521232 | tig0034871:+5270 | Msa1453670:CDS |
| TCTTCGAACAATATTTGGCC+AGG | 0.521570 | tig0034871:-3118 | Msa1453670:intergenic |
| GGAGATGGTCGCTCAATGCC+TGG | 0.523620 | tig0034871:+3355 | Msa1453670:CDS |
| GCCTGGTATTAGTTCACCAA+TGG | 0.525635 | tig0034871:+3372 | Msa1453670:CDS |
| AAAGGTGGTGCTGGCGATGG+TGG | 0.526742 | tig0034871:+6055 | Msa1453670:CDS |
| GGTCACTTGGATTGAGCACT+GGG | 0.528082 | tig0034871:+4980 | Msa1453670:intron |
| TGCAGCTTTGATCTTCTGAA+TGG | 0.531714 | tig0034871:-6182 | Msa1453670:intergenic |
| GTTCACATTGCCAAAGGTCA+AGG | 0.536772 | tig0034871:+5565 | Msa1453670:CDS |
| GGATACATCTTGCTCGGTGG+TGG | 0.536827 | tig0034871:+5886 | Msa1453670:CDS |
| TTTGCAGCATTGAGCCAAGC+TGG | 0.536871 | tig0034871:+5247 | Msa1453670:intron |
| TGAGTACATAAGAGTCAGAA+TGG | 0.536981 | tig0034871:+1986 | Msa1453670:five_prime_UTR |
| GAGTGTGAACAGTTCCTGTA+AGG | 0.537925 | tig0034871:+2086 | Msa1453670:CDS |
| GGAATCGGTGGAACAAGAAA+TGG | 0.540658 | tig0034871:+3880 | Msa1453670:CDS |
| CAGGAAAATGACAAGCTAAG+AGG | 0.541163 | tig0034871:+3028 | Msa1453670:CDS |
| TACATAAGAGTCAGAATGGA+AGG | 0.542507 | tig0034871:+1990 | Msa1453670:five_prime_UTR |
| TGTATTGGTCCTAAACCCGC+TGG | 0.543160 | tig0034871:+3574 | Msa1453670:CDS |
| ATGAAAGGCTTAGAAGCGAG+TGG | 0.543168 | tig0034871:+5506 | Msa1453670:CDS |
| TTGGATCTTAGCAAGAGACT+TGG | 0.543973 | tig0034871:+2674 | Msa1453670:CDS |
| CCAGAGGGATCATTACCATC+AGG | 0.544598 | tig0034871:-6004 | Msa1453670:intergenic |
| AACCCCAGAACAGAAGTTGT+TGG | 0.545437 | tig0034871:-5305 | Msa1453670:intergenic |
| GAATCGTCGAACCCAAATGA+AGG | 0.545567 | tig0034871:+2730 | Msa1453670:CDS |
| GGTGGAAGTTTGCTCACAGT+CGG | 0.546541 | tig0034871:+6076 | Msa1453670:CDS |
| TTCTGTAAGCAGCATGCAGA+AGG | 0.546904 | tig0034871:+4061 | Msa1453670:CDS |
| GGCTCTAATAGATCTTGCAT+TGG | 0.550601 | tig0034871:+3435 | Msa1453670:CDS |
| TTTGAGGATGGTAGAGCCAT+GGG | 0.555597 | tig0034871:-3244 | Msa1453670:intergenic |
| GTGATGATGGTCAGCGCAAG+AGG | 0.555699 | tig0034871:+2467 | Msa1453670:CDS |
| ATCATCATTGGCTAATCCCA+TGG | 0.556384 | tig0034871:+3228 | Msa1453670:CDS |
| GATCAGGATGGTGGTGATGA+TGG | 0.558173 | tig0034871:+2454 | Msa1453670:CDS |
| AATGTGAACCATCTCTTGCA+TGG | 0.559591 | tig0034871:-5551 | Msa1453670:intergenic |
| CCTGATGGTAATGATCCCTC+TGG | 0.562249 | tig0034871:+6004 | Msa1453670:CDS |
| TGGTGTATGCACCAGTTGAC+GGG | 0.562286 | tig0034871:+5906 | Msa1453670:CDS |
| CTACTTCCCATCAATCCCAT+TGG | 0.562854 | tig0034871:-3388 | Msa1453670:intergenic |
| ATGGGACTTGATCTCGGAGA+TGG | 0.563438 | tig0034871:+3340 | Msa1453670:CDS |
| GGCATGAGAACATAATGCTT+AGG | 0.566863 | tig0034871:+3005 | Msa1453670:CDS |
| GTCTGGAACTTGGTATCGGA+AGG | 0.567325 | tig0034871:+3272 | Msa1453670:CDS |
| CAGAAAGGTGGTGCTGGCGA+TGG | 0.567714 | tig0034871:+6052 | Msa1453670:CDS |
| ATGTGAACCATCTCTTGCAT+GGG | 0.567812 | tig0034871:-5550 | Msa1453670:intergenic |
| TCCATTGTGAGCTTGGCAGT+TGG | 0.569368 | tig0034871:-6124 | Msa1453670:intergenic |
| AGATAAAAGTCTTGTTTGTG+GGG | 0.569816 | tig0034871:+1787 | Msa1453670:five_prime_UTR |
| ACCAGATAAAACATCAAGGT+TGG | 0.570465 | tig0034871:-3857 | Msa1453670:intergenic |
| ATTTGAGGATGGTAGAGCCA+TGG | 0.573157 | tig0034871:-3245 | Msa1453670:intergenic |
| ACTTTACAGAAAGGTGGTGC+TGG | 0.574608 | tig0034871:+6046 | Msa1453670:CDS |
| TCTGGTCTGGAACTTGGTAT+CGG | 0.578760 | tig0034871:+3268 | Msa1453670:CDS |
| ACCCTCCAAAGGCAGTGTGA+AGG | 0.587970 | tig0034871:+5086 | Msa1453670:CDS |
| TTGGATGGATACATCTTGCT+CGG | 0.589147 | tig0034871:+5880 | Msa1453670:CDS |
| TGGTGGACCCATGCAAGAGA+TGG | 0.592249 | tig0034871:+5543 | Msa1453670:CDS |
| GATTCTGCAAGAAACTTGGA+TGG | 0.592935 | tig0034871:+5865 | Msa1453670:CDS |
| GACCAACAACTTCTGTTCTG+GGG | 0.596269 | tig0034871:+5303 | Msa1453670:CDS |
| GCAGCATGCAGAAGGTGTAT+GGG | 0.596526 | tig0034871:+4069 | Msa1453670:CDS |
| GGAACTCGTGGCGTTGCTGA+TGG | 0.596588 | tig0034871:+6380 | Msa1453670:three_prime_UTR |
| GATGGATCGCCACCCTCCAA+AGG | 0.597522 | tig0034871:+5075 | Msa1453670:CDS |
| GGAACAATTGCAAAGCCTGA+AGG | 0.597670 | tig0034871:-5983 | Msa1453670:intergenic |
| TCCAGACCAGAATTTGAGGA+TGG | 0.597964 | tig0034871:-3256 | Msa1453670:intergenic |
| GCAGCGCTAAGCACGATACC+GGG | 0.598314 | tig0034871:-5430 | Msa1453670:intergenic |
| ACTTGACGAACCGGGACTAG+TGG | 0.600610 | tig0034871:-4025 | Msa1453670:intergenic |
| CAAGTTGCAACTGTAAAGGA+CGG | 0.603277 | tig0034871:-6543 | Msa1453670:intergenic |
| AGATCAAGTCCCATTGGCAA+AGG | 0.604435 | tig0034871:-3331 | Msa1453670:intergenic |
| TCTCCGAGATCAAGTCCCAT+TGG | 0.604534 | tig0034871:-3337 | Msa1453670:intergenic |
| CCAATATGCAACAACTGTGG+TGG | 0.604713 | tig0034871:+3085 | Msa1453670:CDS |
| TAGCATGATGAAAGAAGCAA+TGG | 0.604769 | tig0034871:+3057 | Msa1453670:CDS |
| TGCAGAAGGTGTATGGGCCG+TGG | 0.605614 | tig0034871:+4075 | Msa1453670:CDS |
| GAATGCAAAGACTAACTCGC+AGG | 0.606002 | tig0034871:-6476 | Msa1453670:intergenic |
| GGTGTGATCATCGTTTGAGA+TGG | 0.606434 | tig0034871:-5132 | Msa1453670:intergenic |
| GAACTTGGTATCGGAAGGAA+CGG | 0.607404 | tig0034871:+3277 | Msa1453670:CDS |
| TTGTTTGTGGGGTGTTGACA+AGG | 0.608143 | tig0034871:+1798 | Msa1453670:five_prime_UTR |
| TTGAATGTGGTGATGAGTGG+TGG | 0.609782 | tig0034871:+5935 | Msa1453670:CDS |
| ATGATGATATTGGTTTGCCA+AGG | 0.610133 | tig0034871:-3213 | Msa1453670:intergenic |
| CATGCTGCTTACAGAACCGA+AGG | 0.611995 | tig0034871:-4054 | Msa1453670:intergenic |
| CTGAAGCTACGAGAGAAACC+GGG | 0.613811 | tig0034871:+3605 | Msa1453670:CDS |
| ATCATCGTTTGAGATGGAAG+AGG | 0.615317 | tig0034871:-5126 | Msa1453670:intergenic |
| TAAGCAACGGACGATAGAGT+TGG | 0.616243 | tig0034871:-5025 | Msa1453670:intergenic |
| TCTTCCTTTCTGATCCAACA+AGG | 0.616341 | tig0034871:-1692 | Msa1453670:intergenic |
| TGTGGAAACTTTGATGGATG+CGG | 0.616357 | tig0034871:+3654 | Msa1453670:CDS |
| TCCAACTGCCAAGCTCACAA+TGG | 0.619453 | tig0034871:+6123 | Msa1453670:CDS |
| TGAATCAGACTCAACTGGAA+AGG | 0.621264 | tig0034871:+2984 | Msa1453670:intron |
| GAGAGGATGAGTATGAAAGC+CGG | 0.622277 | tig0034871:+2389 | Msa1453670:CDS |
| TTCACATTGCCAAAGGTCAA+GGG | 0.624942 | tig0034871:+5566 | Msa1453670:CDS |
| ATGACATGAGAGTTATGACT+AGG | 0.627138 | tig0034871:+5380 | Msa1453670:CDS |
| TATGCCAAATGGTTACTCCA+AGG | 0.627451 | tig0034871:+4189 | Msa1453670:CDS |
| TTCCACCAGATAAAACATCA+AGG | 0.627792 | tig0034871:-3861 | Msa1453670:intergenic |
| GCTTCAGCGACAAAACCAGC+GGG | 0.631586 | tig0034871:-3589 | Msa1453670:intergenic |
| ATTGCCAAAGGTCAAGGGCA+AGG | 0.631892 | tig0034871:+5571 | Msa1453670:CDS |
| TGAATCAAGAAGAGTATGCA+CGG | 0.632793 | tig0034871:+3539 | Msa1453670:CDS |
| GCAATTTCAGATGCATACTG+AGG | 0.637345 | tig0034871:+3988 | Msa1453670:intron |
| TTTGATTAGGAGTGTGTCTG+TGG | 0.637619 | tig0034871:-2501 | Msa1453670:intergenic |
| TTTGACAAGCCGTAGCCAGA+GGG | 0.639169 | tig0034871:-6019 | Msa1453670:intergenic |
| TGAAAGGCTTAGAAGCGAGT+GGG | 0.641966 | tig0034871:+5507 | Msa1453670:CDS |
| ATTGTGCAGGATATGCCAAA+TGG | 0.645079 | tig0034871:+4178 | Msa1453670:CDS |
| AATGGGACAGCCTCCAAATG+GGG | 0.646605 | tig0034871:+5347 | Msa1453670:CDS |
| AATGGTACTTTACAGAAAGG+TGG | 0.653820 | tig0034871:+6040 | Msa1453670:CDS |
| TTGAGATGGAAGAGGACATG+AGG | 0.654253 | tig0034871:-5118 | Msa1453670:intergenic |
| GAGATGGTTCACATTGCCAA+AGG | 0.654763 | tig0034871:+5559 | Msa1453670:CDS |
| TCCTGCACAATACAGCCAGA+AGG | 0.655286 | tig0034871:-4166 | Msa1453670:intergenic |
| CGATACCGGGAGGCTCGCCA+GGG | 0.655976 | tig0034871:-5417 | Msa1453670:intergenic |
| CTCAACAGAAACATCAACCA+CGG | 0.657444 | tig0034871:-4092 | Msa1453670:intergenic |
| TGAACCTTGTTGGATCAGAA+AGG | 0.657649 | tig0034871:+1688 | Msa1453670:five_prime_UTR |
| AGCTTCAGCGACAAAACCAG+CGG | 0.660319 | tig0034871:-3590 | Msa1453670:intergenic |
| TCATTGAATGTGGTGATGAG+TGG | 0.663206 | tig0034871:+5932 | Msa1453670:CDS |
| ATTTGACAAGCCGTAGCCAG+AGG | 0.664455 | tig0034871:-6020 | Msa1453670:intergenic |
| GCGCTAAGCACGATACCGGG+AGG | 0.668252 | tig0034871:-5427 | Msa1453670:intergenic |
| CCAAAACCAGAAATAAGCAA+CGG | 0.679772 | tig0034871:-5038 | Msa1453670:intergenic |
| GATGGATACATCTTGCTCGG+TGG | 0.691053 | tig0034871:+5883 | Msa1453670:CDS |
| CATTGGCAAAGGATTGCCGA+GGG | 0.693173 | tig0034871:-3320 | Msa1453670:intergenic |
| TCTGCTTGGGAGAATGAGAG+AGG | 0.693480 | tig0034871:+2372 | Msa1453670:CDS |
| GGAAAATGACAAGCTAAGAG+GGG | 0.705532 | tig0034871:+3030 | Msa1453670:CDS |
| ATCTCAAACGATGATCACAC+CGG | 0.708202 | tig0034871:+5134 | Msa1453670:CDS |
| TAAAACTTACATTAGCACGA+AGG | 0.708878 | tig0034871:-5609 | Msa1453670:intergenic |
| TGACGGGCAATCATTGAATG+TGG | 0.709763 | tig0034871:+5922 | Msa1453670:CDS |
| CCATTGGCAAAGGATTGCCG+AGG | 0.716261 | tig0034871:-3321 | Msa1453670:intergenic |
| TCTGGTGATGATCAGGATGG+TGG | 0.723311 | tig0034871:+2445 | Msa1453670:CDS |
| ATATCTGGTGATGATCAGGA+TGG | 0.775557 | tig0034871:+2442 | Msa1453670:CDS |
| AATCCAATATGCAACAACTG+TGG | 0.796420 | tig0034871:+3082 | Msa1453670:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAATCTTATTTTTCTTA+TGG | + | tig0034871:2056-2075 | Msa1453670:exon | 10.0% |
| !!! | AAAAATCTTATTTTTCTTAT+GGG | + | tig0034871:2057-2076 | Msa1453670:exon | 10.0% |
| !!! | TTATTAATCTTTATTGTTTT+TGG | + | tig0034871:2214-2233 | Msa1453670:intron | 10.0% |
| !!! | AAACAAATATTTTATACTAA+AGG | - | tig0034871:4590-4609 | Msa1453670:intergenic | 10.0% |
| !! | TAATGCTATATAAAATATAA+TGG | + | tig0034871:4657-4676 | Msa1453670:intron | 10.0% |
| !!! | AAAATCTTATTTTTCTTATG+GGG | + | tig0034871:2058-2077 | Msa1453670:exon | 15.0% |
| !!! | TAATCTTATATCTTGTTTTA+TGG | + | tig0034871:2190-2209 | Msa1453670:intron | 15.0% |
| !! | AAAAAACAATAAGAGAAAAA+TGG | - | tig0034871:2607-2626 | Msa1453670:intergenic | 15.0% |
| !!! | TTTTTTTTTTAGTTTCTTCA+AGG | + | tig0034871:2622-2641 | Msa1453670:intron | 15.0% |
| !! | TATTAATACAAATGCAATAA+CGG | - | tig0034871:2926-2945 | Msa1453670:intergenic | 15.0% |
| !! | ATCTGTCTAATTATATTAAA+AGG | - | tig0034871:4707-4726 | Msa1453670:intergenic | 15.0% |
| !!! | TTATAATTTATAATTAGCCT+AGG | + | tig0034871:4864-4883 | Msa1453670:intron | 15.0% |
| !!! | TATAATTTATAATTAGCCTA+GGG | + | tig0034871:4865-4884 | Msa1453670:intron | 15.0% |
| !!! | GTTTTATTAATTTTTTGAAC+TGG | + | tig0034871:6277-6296 | Msa1453670:three_prime_UTR | 15.0% |
| !! | TAGTTAAGAACTAAAAACAA+TGG | - | tig0034871:2565-2584 | Msa1453670:intergenic | 20.0% |
| !!! | TTTTTAGTTCTTAACTAATG+TGG | + | tig0034871:2568-2587 | Msa1453670:intron | 20.0% |
| !! | AAAATAAACAAGTCAAATTC+TGG | + | tig0034871:2702-2721 | Msa1453670:CDS | 20.0% |
| !!! | TGCAGATTTTTAAAAGAAAA+TGG | - | tig0034871:2775-2794 | Msa1453670:intergenic | 20.0% |
| !! | GTTTGTAATCTTTGATATTA+TGG | - | tig0034871:2877-2896 | Msa1453670:intergenic | 20.0% |
| !! | TATGGATGAATTATTAAAGA+TGG | + | tig0034871:3462-3481 | Msa1453670:CDS | 20.0% |
| !! | AAAAAGTTTCCTATCAAAAT+CGG | - | tig0034871:3725-3744 | Msa1453670:intergenic | 20.0% |
| !! | TGCTATATCTAAATAGAATA+AGG | + | tig0034871:4296-4315 | Msa1453670:intron | 20.0% |
| !! | AATAGAATAAGGTTGAAATA+AGG | + | tig0034871:4307-4326 | Msa1453670:intron | 20.0% |
| !!! | AGTTTTTTTACTTGTTTACT+TGG | + | tig0034871:4362-4381 | Msa1453670:intron | 20.0% |
| !!! | GTTTTTTTACTTGTTTACTT+GGG | + | tig0034871:4363-4382 | Msa1453670:intron | 20.0% |
| !!! | TGCATGAAAATTTTAAATCT+TGG | + | tig0034871:4511-4530 | Msa1453670:intron | 20.0% |
| !! | CTTGTTAACTACTAATTAAA+TGG | + | tig0034871:5204-5223 | Msa1453670:intron | 20.0% |
| !! | CTAATTAAATGGTGTAAATT+TGG | + | tig0034871:5215-5234 | Msa1453670:intron | 20.0% |
| !! | TTTTTGGATTTTCTCTTTCA+GGG | + | tig0034871:1532-1551 | Msa1453670:five_prime_UTR | 25.0% |
| !!! | AAAGATAAAAGTCTTGTTTG+TGG | + | tig0034871:1785-1804 | Msa1453670:five_prime_UTR | 25.0% |
| !!! | AAGATAAAAGTCTTGTTTGT+GGG | + | tig0034871:1786-1805 | Msa1453670:five_prime_UTR | 25.0% |
| !! | ATTCAATCTTTGTCAGTTTT+TGG | + | tig0034871:1861-1880 | Msa1453670:five_prime_UTR | 25.0% |
| ! | AATTTGAGTCAAAAAGTCAA+AGG | + | tig0034871:1887-1906 | Msa1453670:five_prime_UTR | 25.0% |
| ! | ATTTGAGTCAAAAAGTCAAA+GGG | + | tig0034871:1888-1907 | Msa1453670:five_prime_UTR | 25.0% |
| ! | TCAAAAACTGAAAAGTTCAT+TGG | + | tig0034871:1921-1940 | Msa1453670:five_prime_UTR | 25.0% |
| !! | TTTTGCATTGAACTAGAAAA+GGG | - | tig0034871:2141-2160 | Msa1453670:intergenic | 25.0% |
| !! | ATTTTGCATTGAACTAGAAA+AGG | - | tig0034871:2142-2161 | Msa1453670:intergenic | 25.0% |
| !! | TTTTCTACAGCAAAGAAAAA+TGG | + | tig0034871:2303-2322 | Msa1453670:intron | 25.0% |
| ! | TTTAATACTCACCTTCATTT+GGG | - | tig0034871:2744-2763 | Msa1453670:intergenic | 25.0% |
| ! | ATTTAATACTCACCTTCATT+TGG | - | tig0034871:2745-2764 | Msa1453670:intergenic | 25.0% |
| ! | AAATTACAAAGAAGACTAAG+AGG | - | tig0034871:3700-3719 | Msa1453670:intergenic | 25.0% |
| !!! | GTAATTTAACCGATTTTGAT+AGG | + | tig0034871:3713-3732 | Msa1453670:intron | 25.0% |
| !!! | TACCAAAAAACTGATTTTTC+AGG | - | tig0034871:4343-4362 | Msa1453670:intergenic | 25.0% |
| ! | TGAAACTTCATATATCTGTT+TGG | + | tig0034871:4468-4487 | Msa1453670:intron | 25.0% |
| ! | CGTATGTAAGATGTTTATAT+AGG | - | tig0034871:4836-4855 | Msa1453670:intergenic | 25.0% |
| ! | AAAATAAGTTGCATTGTTGT+AGG | + | tig0034871:4959-4978 | Msa1453670:intron | 25.0% |
| !! | ACGTATGATTTGGATTTAAA+CGG | - | tig0034871:5640-5659 | Msa1453670:intergenic | 25.0% |
| ! | GCTATAGAGAAATCATAAAT+AGG | + | tig0034871:5662-5681 | Msa1453670:intron | 25.0% |
| !! | AATCCATTTTGTTAATGCAA+TGG | + | tig0034871:6222-6241 | Msa1453670:three_prime_UTR | 25.0% |
| ! | AAAAACAAGTTCACAAAACA+AGG | - | tig0034871:6255-6274 | Msa1453670:intergenic | 25.0% |
| !!! | TGTTTTGTGAACTTGTTTTT+TGG | + | tig0034871:6255-6274 | Msa1453670:three_prime_UTR | 25.0% |
| GAAAATCCAAAAACATTGCA+TGG | - | tig0034871:1525-1544 | Msa1453670:intergenic | 30.0% | |
| !! | GTTTTTGGATTTTCTCTTTC+AGG | + | tig0034871:1531-1550 | Msa1453670:five_prime_UTR | 30.0% |
| TCTCAATACTGACAAGAAAT+TGG | + | tig0034871:1568-1587 | Msa1453670:five_prime_UTR | 30.0% | |
| CCAGAAAAAACAGATGAAAA+AGG | - | tig0034871:1742-1761 | Msa1453670:intergenic | 30.0% | |
| !!! | CCTTTTTCATCTGTTTTTTC+TGG | + | tig0034871:1739-1758 | Msa1453670:five_prime_UTR | 30.0% |
| !!! | TCATCTGTTTTTTCTGGATT+AGG | + | tig0034871:1745-1764 | Msa1453670:five_prime_UTR | 30.0% |
| !! | AGATAAAAGTCTTGTTTGTG+GGG | + | tig0034871:1787-1806 | Msa1453670:five_prime_UTR | 30.0% |
| ! | ATTCTTCTCAGACAAGTTTT+AGG | + | tig0034871:2026-2045 | Msa1453670:five_prime_UTR | 30.0% |
| !! | ACAGTTGATAAGAAAGAAGA+TGG | - | tig0034871:2165-2184 | Msa1453670:intergenic | 30.0% |
| !! | TTGGATTTGATTTTGCATGT+TGG | + | tig0034871:2233-2252 | Msa1453670:intron | 30.0% |
| TTTGATCTTGAAGGAATATC+TGG | + | tig0034871:2427-2446 | Msa1453670:CDS | 30.0% | |
| TCAAGCTCTTGAATTTGATT+AGG | - | tig0034871:2517-2536 | Msa1453670:intergenic | 30.0% | |
| ! | TTTTTAATGTCTCCACAACA+AGG | + | tig0034871:2822-2841 | Msa1453670:intron | 30.0% |
| ! | TGTTTGTTAAGGCACATATA+CGG | - | tig0034871:3189-3208 | Msa1453670:intergenic | 30.0% |
| ! | ACTGTTGATTATTACTATCC+CGG | - | tig0034871:3626-3645 | Msa1453670:intergenic | 30.0% |
| !! | AAGAAATGGTGCTATACATT+TGG | + | tig0034871:3894-3913 | Msa1453670:CDS | 30.0% |
| !!! | TGCCTGAAAAATCAGTTTTT+TGG | + | tig0034871:4338-4357 | Msa1453670:intron | 30.0% |
| AAATTGATACAGATGTCAGA+AGG | - | tig0034871:4797-4816 | Msa1453670:intergenic | 30.0% | |
| TATAATTGCAACGAGTATGT+TGG | + | tig0034871:4926-4945 | Msa1453670:intron | 30.0% | |
| !!! | CTTATTTCTGGTTTTGGATT+TGG | + | tig0034871:5044-5063 | Msa1453670:CDS | 30.0% |
| !!! | ATGCATGTGATTTGTTTTAC+CGG | - | tig0034871:5156-5175 | Msa1453670:intergenic | 30.0% |
| TAAAACTTACATTAGCACGA+AGG | - | tig0034871:5612-5631 | Msa1453670:intergenic | 30.0% | |
| TCTATAGCTAACGTATGATT+TGG | - | tig0034871:5650-5669 | Msa1453670:intergenic | 30.0% | |
| TCTCATAAAACCAACTTACA+AGG | - | tig0034871:5707-5726 | Msa1453670:intergenic | 30.0% | |
| !!! | TGGTTTTATGAGATTGAGTT+AGG | + | tig0034871:5714-5733 | Msa1453670:intron | 30.0% |
| TTATGAGATTGAGTTAGGAT+CGG | + | tig0034871:5719-5738 | Msa1453670:intron | 30.0% | |
| TCAAATGGTACTTTACAGAA+AGG | + | tig0034871:6037-6056 | Msa1453670:CDS | 30.0% | |
| TCACCATTGCATTAACAAAA+TGG | - | tig0034871:6228-6247 | Msa1453670:intergenic | 30.0% | |
| !!! | ATTTTTTGAACTGGTGAGAA+AGG | + | tig0034871:6286-6305 | Msa1453670:three_prime_UTR | 30.0% |
| !!! | TTTTTTGAACTGGTGAGAAA+GGG | + | tig0034871:6287-6306 | Msa1453670:three_prime_UTR | 30.0% |
| GGTTATACATTTGGTTGTAT+AGG | + | tig0034871:6309-6328 | Msa1453670:three_prime_UTR | 30.0% | |
| TACATTTGGTTGTATAGGAA+AGG | + | tig0034871:6314-6333 | Msa1453670:three_prime_UTR | 30.0% | |
| !! | GCAAACAAGTTTTCTAGTAA+TGG | + | tig0034871:6430-6449 | Msa1453670:three_prime_UTR | 30.0% |
| !! | AACAAGTTTTCTAGTAATGG+TGG | + | tig0034871:6433-6452 | Msa1453670:three_prime_UTR | 30.0% |
| ! | TCTCTTCCATGCAATGTTTT+TGG | + | tig0034871:1516-1535 | Msa1453670:five_prime_UTR | 35.0% |
| CAGATGAAAAAGGTTACAAC+AGG | - | tig0034871:1732-1751 | Msa1453670:intergenic | 35.0% | |
| TGAGTACATAAGAGTCAGAA+TGG | + | tig0034871:1986-2005 | Msa1453670:five_prime_UTR | 35.0% | |
| TACATAAGAGTCAGAATGGA+AGG | + | tig0034871:1990-2009 | Msa1453670:five_prime_UTR | 35.0% | |
| TCTACAGCAAAGAAAAATGG+AGG | + | tig0034871:2306-2325 | Msa1453670:intron | 35.0% | |
| CTACAGCAAAGAAAAATGGA+GGG | + | tig0034871:2307-2326 | Msa1453670:intron | 35.0% | |
| TACAGCAAAGAAAAATGGAG+GGG | + | tig0034871:2308-2327 | Msa1453670:intron | 35.0% | |
| AAGATCAAAGTTATCGCTTC+CGG | - | tig0034871:2416-2435 | Msa1453670:intergenic | 35.0% | |
| AGCGATAACTTTGATCTTGA+AGG | + | tig0034871:2418-2437 | Msa1453670:CDS | 35.0% | |
| !!! | CTTTGTTTTTCATCAGGATG+AGG | - | tig0034871:2653-2672 | Msa1453670:intergenic | 35.0% |
| CTCATCCTGATGAAAAACAA+AGG | + | tig0034871:2651-2670 | Msa1453670:CDS | 35.0% | |
| TCCTGATGAAAAACAAAGGT+TGG | + | tig0034871:2655-2674 | Msa1453670:CDS | 35.0% | |
| !!! | TCCAACCTTTGTTTTTCATC+AGG | - | tig0034871:2659-2678 | Msa1453670:intergenic | 35.0% |
| TGGAGAATCACATACAAAAG+CGG | - | tig0034871:2857-2876 | Msa1453670:intergenic | 35.0% | |
| TTTGTTGAATCAGACTCAAC+TGG | + | tig0034871:2979-2998 | Msa1453670:intron | 35.0% | |
| AGGAAAATGACAAGCTAAGA+GGG | + | tig0034871:3029-3048 | Msa1453670:CDS | 35.0% | |
| TAGCATGATGAAAGAAGCAA+TGG | + | tig0034871:3057-3076 | Msa1453670:CDS | 35.0% | |
| AATCCAATATGCAACAACTG+TGG | + | tig0034871:3082-3101 | Msa1453670:CDS | 35.0% | |
| ! | GAGCGTTTTCAATTCTAATC+TGG | - | tig0034871:3147-3166 | Msa1453670:intergenic | 35.0% |
| AATTGAAAACGCTCGTCTAA+AGG | + | tig0034871:3153-3172 | Msa1453670:CDS | 35.0% | |
| !! | ATGATGATATTGGTTTGCCA+AGG | - | tig0034871:3216-3235 | Msa1453670:intergenic | 35.0% |
| TGGCAAACCAATATCATCAT+TGG | + | tig0034871:3216-3235 | Msa1453670:CDS | 35.0% | |
| !! | GGATTAGCCAATGATGATAT+TGG | - | tig0034871:3226-3245 | Msa1453670:intergenic | 35.0% |
| AGATAGTCCTGTTTGGATTA+AGG | + | tig0034871:3492-3511 | Msa1453670:CDS | 35.0% | |
| GATAGTCCTGTTTGGATTAA+GGG | + | tig0034871:3493-3512 | Msa1453670:CDS | 35.0% | |
| ! | TGAATCAAGAAGAGTATGCA+CGG | + | tig0034871:3539-3558 | Msa1453670:CDS | 35.0% |
| ! | CGGTTGATTTCTTCTTGTAT+TGG | + | tig0034871:3559-3578 | Msa1453670:CDS | 35.0% |
| AATCAACAGTTTAGCACTTG+TGG | + | tig0034871:3636-3655 | Msa1453670:CDS | 35.0% | |
| ATTACCATCAAAGTTTCTGC+AGG | + | tig0034871:3746-3765 | Msa1453670:intron | 35.0% | |
| ACCAGATAAAACATCAAGGT+TGG | - | tig0034871:3860-3879 | Msa1453670:intergenic | 35.0% | |
| ! | AACCTTGATGTTTTATCTGG+TGG | + | tig0034871:3859-3878 | Msa1453670:CDS | 35.0% |
| TTCCACCAGATAAAACATCA+AGG | - | tig0034871:3864-3883 | Msa1453670:intergenic | 35.0% | |
| ! | GATGTTTTATCTGGTGGAAT+CGG | + | tig0034871:3865-3884 | Msa1453670:CDS | 35.0% |
| ! | GTTGATGTTTCTGTTGAGAT+TGG | + | tig0034871:4097-4116 | Msa1453670:CDS | 35.0% |
| ATGAATGGTTGTGCATTAGA+AGG | - | tig0034871:4130-4149 | Msa1453670:intergenic | 35.0% | |
| AGTCTTCTACAGCTTATGAA+TGG | - | tig0034871:4145-4164 | Msa1453670:intergenic | 35.0% | |
| ACTTGTATTAGCACTTACCT+TGG | - | tig0034871:4209-4228 | Msa1453670:intergenic | 35.0% | |
| TCCTAGAGATTAGTGAATCA+AGG | + | tig0034871:4428-4447 | Msa1453670:intron | 35.0% | |
| AAATGTTGACATAATGCCCT+AGG | - | tig0034871:4884-4903 | Msa1453670:intergenic | 35.0% | |
| CCAAAACCAGAAATAAGCAA+CGG | - | tig0034871:5041-5060 | Msa1453670:intergenic | 35.0% | |
| ATGACATGAGAGTTATGACT+AGG | + | tig0034871:5380-5399 | Msa1453670:CDS | 35.0% | |
| AACAGTCTTTGTCTTGAAAC+TGG | - | tig0034871:5472-5491 | Msa1453670:intergenic | 35.0% | |
| ! | TTGATTTTCTGCGTGATGAA+AGG | + | tig0034871:5491-5510 | Msa1453670:CDS | 35.0% |
| AAACAATCCTCCTTGTAAGT+TGG | + | tig0034871:5694-5713 | Msa1453670:intron | 35.0% | |
| CATAAAACCAACTTACAAGG+AGG | - | tig0034871:5704-5723 | Msa1453670:intergenic | 35.0% | |
| !! | ATTGAGTTAGGATCGGTTTT+GGG | + | tig0034871:5726-5745 | Msa1453670:intron | 35.0% |
| CCTGCAAAAACAAAGATTCT+TGG | - | tig0034871:5817-5836 | Msa1453670:intergenic | 35.0% | |
| !!! | CCAAGAATCTTTGTTTTTGC+AGG | + | tig0034871:5814-5833 | Msa1453670:intron | 35.0% |
| !! | TGTTGATTCTGCAAGAAACT+TGG | + | tig0034871:5861-5880 | Msa1453670:CDS | 35.0% |
| AATGGTACTTTACAGAAAGG+TGG | + | tig0034871:6040-6059 | Msa1453670:CDS | 35.0% | |
| GAAGACTATTCACCAGAATT+TGG | - | tig0034871:6105-6124 | Msa1453670:intergenic | 35.0% | |
| ! | TTTTTGAACTGGTGAGAAAG+GGG | + | tig0034871:6288-6307 | Msa1453670:three_prime_UTR | 35.0% |
| TGAGAAAGGGGTTATACATT+TGG | + | tig0034871:6300-6319 | Msa1453670:three_prime_UTR | 35.0% | |
| TGTATAGGAAAGGTTGCTTA+AGG | + | tig0034871:6324-6343 | Msa1453670:three_prime_UTR | 35.0% | |
| !! | GTTTTCTAGTAATGGTGGTT+CGG | + | tig0034871:6438-6457 | Msa1453670:three_prime_UTR | 35.0% |
| !! | TTTTCTAGTAATGGTGGTTC+GGG | + | tig0034871:6439-6458 | Msa1453670:three_prime_UTR | 35.0% |
| ! | CAGAACAGACACATATGTTT+TGG | - | tig0034871:6514-6533 | Msa1453670:intergenic | 35.0% |
| TTTGCAAGTTGCAACTGTAA+AGG | - | tig0034871:6550-6569 | Msa1453670:intergenic | 35.0% | |
| TTACAGTTGCAACTTGCAAA+TGG | + | tig0034871:6550-6569 | Msa1453670:three_prime_UTR | 35.0% | |
| TACAGTTGCAACTTGCAAAT+GGG | + | tig0034871:6551-6570 | Msa1453670:three_prime_UTR | 35.0% | |
| GCAAGAACAGTGACACATAA+GGG | - | tig0034871:1638-1657 | Msa1453670:intergenic | 40.0% | |
| AGCAAGAACAGTGACACATA+AGG | - | tig0034871:1639-1658 | Msa1453670:intergenic | 40.0% | |
| TGAACCTTGTTGGATCAGAA+AGG | + | tig0034871:1688-1707 | Msa1453670:five_prime_UTR | 40.0% | |
| TCTTCCTTTCTGATCCAACA+AGG | - | tig0034871:1695-1714 | Msa1453670:intergenic | 40.0% | |
| CAAAAAGTCAAAGGGTTGTG+TGG | + | tig0034871:1896-1915 | Msa1453670:five_prime_UTR | 40.0% | |
| ! | AAAGTGATAGTGACGATTGC+TGG | + | tig0034871:1946-1965 | Msa1453670:five_prime_UTR | 40.0% |
| ACTGGTGATAGCTTAGATAC+TGG | + | tig0034871:2349-2368 | Msa1453670:CDS | 40.0% | |
| ! | AGGAATATCTGGTGATGATC+AGG | + | tig0034871:2438-2457 | Msa1453670:CDS | 40.0% |
| ! | ATATCTGGTGATGATCAGGA+TGG | + | tig0034871:2442-2461 | Msa1453670:CDS | 40.0% |
| ! | TTTGATTAGGAGTGTGTCTG+TGG | - | tig0034871:2504-2523 | Msa1453670:intergenic | 40.0% |
| TTGGATCTTAGCAAGAGACT+TGG | + | tig0034871:2674-2693 | Msa1453670:CDS | 40.0% | |
| ATCACATACAAAAGCGGCTT+AGG | - | tig0034871:2851-2870 | Msa1453670:intergenic | 40.0% | |
| TGAATCAGACTCAACTGGAA+AGG | + | tig0034871:2984-3003 | Msa1453670:intron | 40.0% | |
| GGCATGAGAACATAATGCTT+AGG | + | tig0034871:3005-3024 | Msa1453670:CDS | 40.0% | |
| TGAGAACATAATGCTTAGGC+AGG | + | tig0034871:3009-3028 | Msa1453670:CDS | 40.0% | |
| CAGGAAAATGACAAGCTAAG+AGG | + | tig0034871:3028-3047 | Msa1453670:CDS | 40.0% | |
| GGAAAATGACAAGCTAAGAG+GGG | + | tig0034871:3030-3049 | Msa1453670:CDS | 40.0% | |
| AATATTTGGCCAGGAATTGC+TGG | - | tig0034871:3112-3131 | Msa1453670:intergenic | 40.0% | |
| TCTTCGAACAATATTTGGCC+AGG | - | tig0034871:3121-3140 | Msa1453670:intergenic | 40.0% | |
| GGTGCTCTTCGAACAATATT+TGG | - | tig0034871:3126-3145 | Msa1453670:intergenic | 40.0% | |
| GCCTTAACAAACAAGTTCCT+TGG | + | tig0034871:3196-3215 | Msa1453670:CDS | 40.0% | |
| ! | GCCAAGGAACTTGTTTGTTA+AGG | - | tig0034871:3200-3219 | Msa1453670:intergenic | 40.0% |
| ! | ATCATCATTGGCTAATCCCA+TGG | + | tig0034871:3228-3247 | Msa1453670:CDS | 40.0% |
| AAGTTCCAGACCAGAATTTG+AGG | - | tig0034871:3263-3282 | Msa1453670:intergenic | 40.0% | |
| ! | TCAAATTCTGGTCTGGAACT+TGG | + | tig0034871:3262-3281 | Msa1453670:CDS | 40.0% |
| CCTGGTATTAGTTCACCAAT+GGG | + | tig0034871:3373-3392 | Msa1453670:CDS | 40.0% | |
| TAGTTCACCAATGGGATTGA+TGG | + | tig0034871:3381-3400 | Msa1453670:CDS | 40.0% | |
| AGTTCACCAATGGGATTGAT+GGG | + | tig0034871:3382-3401 | Msa1453670:CDS | 40.0% | |
| TGATGTTCAGCTTGAGAGAT+CGG | + | tig0034871:3414-3433 | Msa1453670:CDS | 40.0% | |
| ! | GGCTCTAATAGATCTTGCAT+TGG | + | tig0034871:3435-3454 | Msa1453670:CDS | 40.0% |
| AGCACTTGTGGAAACTTTGA+TGG | + | tig0034871:3648-3667 | Msa1453670:CDS | 40.0% | |
| ! | TGTGGAAACTTTGATGGATG+CGG | + | tig0034871:3654-3673 | Msa1453670:CDS | 40.0% |
| CAAACCTGCAGAAACTTTGA+TGG | - | tig0034871:3753-3772 | Msa1453670:intergenic | 40.0% | |
| ! | GCCAACCTTGATGTTTTATC+TGG | + | tig0034871:3856-3875 | Msa1453670:CDS | 40.0% |
| ! | AAGTTTGCTTCAATGTGCCT+TGG | + | tig0034871:3941-3960 | Msa1453670:intron | 40.0% |
| TAGTAAGCTCTTGCAAACCA+AGG | - | tig0034871:3961-3980 | Msa1453670:intergenic | 40.0% | |
| !! | TTGGTTTGCAAGAGCTTACT+AGG | + | tig0034871:3960-3979 | Msa1453670:intron | 40.0% |
| GCAATTTCAGATGCATACTG+AGG | + | tig0034871:3988-4007 | Msa1453670:intron | 40.0% | |
| TTCGTCAAGTGAGAATCCTT+CGG | + | tig0034871:4038-4057 | Msa1453670:CDS | 40.0% | |
| CTCAACAGAAACATCAACCA+CGG | - | tig0034871:4095-4114 | Msa1453670:intergenic | 40.0% | |
| ATTGTGCAGGATATGCCAAA+TGG | + | tig0034871:4178-4197 | Msa1453670:CDS | 40.0% | |
| TATGCCAAATGGTTACTCCA+AGG | + | tig0034871:4189-4208 | Msa1453670:CDS | 40.0% | |
| CTTACCTTGGAGTAACCATT+TGG | - | tig0034871:4196-4215 | Msa1453670:intergenic | 40.0% | |
| !! | ATCTCTAGGAGTACTAGAAG+TGG | - | tig0034871:4418-4437 | Msa1453670:intergenic | 40.0% |
| GCCTTGATTCACTAATCTCT+AGG | - | tig0034871:4432-4451 | Msa1453670:intergenic | 40.0% | |
| CTATAATCTGCCAAGTGTGT+CGG | + | tig0034871:4758-4777 | Msa1453670:intron | 40.0% | |
| TATAATCTGCCAAGTGTGTC+GGG | + | tig0034871:4759-4778 | Msa1453670:intron | 40.0% | |
| TACAGATGTCAGAAGGATAG+AGG | - | tig0034871:4790-4809 | Msa1453670:intergenic | 40.0% | |
| TTGCATTGTTGTAGGTCACT+TGG | + | tig0034871:4967-4986 | Msa1453670:intron | 40.0% | |
| TATCGTCCGTTGCTTATTTC+TGG | + | tig0034871:5032-5051 | Msa1453670:CDS | 40.0% | |
| !!! | CCGTTGCTTATTTCTGGTTT+TGG | + | tig0034871:5038-5057 | Msa1453670:CDS | 40.0% |
| ! | ATCATCGTTTGAGATGGAAG+AGG | - | tig0034871:5129-5148 | Msa1453670:intergenic | 40.0% |
| ATCTCAAACGATGATCACAC+CGG | + | tig0034871:5134-5153 | Msa1453670:CDS | 40.0% | |
| ! | TAGAAGAAGCATGTTGAAGC+TGG | + | tig0034871:5270-5289 | Msa1453670:CDS | 40.0% |
| ATGACCAACAACTTCTGTTC+TGG | + | tig0034871:5301-5320 | Msa1453670:CDS | 40.0% | |
| TGACCAACAACTTCTGTTCT+GGG | + | tig0034871:5302-5321 | Msa1453670:CDS | 40.0% | |
| TGCTTCATCTGCCAGAAAAT+GGG | + | tig0034871:5330-5349 | Msa1453670:CDS | 40.0% | |
| !! | AGGAAAAATGTTGATGACCC+TGG | + | tig0034871:5400-5419 | Msa1453670:CDS | 40.0% |
| ! | GAGTGGGACATTTTGTCTAA+TGG | + | tig0034871:5523-5542 | Msa1453670:CDS | 40.0% |
| ! | TGGGACATTTTGTCTAATGG+TGG | + | tig0034871:5526-5545 | Msa1453670:CDS | 40.0% |
| ATGTGAACCATCTCTTGCAT+GGG | - | tig0034871:5553-5572 | Msa1453670:intergenic | 40.0% | |
| AATGTGAACCATCTCTTGCA+TGG | - | tig0034871:5554-5573 | Msa1453670:intergenic | 40.0% | |
| TTCACATTGCCAAAGGTCAA+GGG | + | tig0034871:5566-5585 | Msa1453670:CDS | 40.0% | |
| !! | GATTGAGTTAGGATCGGTTT+TGG | + | tig0034871:5725-5744 | Msa1453670:intron | 40.0% |
| GATTCTGCAAGAAACTTGGA+TGG | + | tig0034871:5865-5884 | Msa1453670:CDS | 40.0% | |
| TTGGATGGATACATCTTGCT+CGG | + | tig0034871:5880-5899 | Msa1453670:CDS | 40.0% | |
| ! | TCATTGAATGTGGTGATGAG+TGG | + | tig0034871:5932-5951 | Msa1453670:CDS | 40.0% |
| ! | TGCAGCTTTGATCTTCTGAA+TGG | - | tig0034871:6185-6204 | Msa1453670:intergenic | 40.0% |
| TAGGAAAGGTTGCTTAAGGA+AGG | + | tig0034871:6328-6347 | Msa1453670:three_prime_UTR | 40.0% | |
| CAAGTTGCAACTGTAAAGGA+CGG | - | tig0034871:6546-6565 | Msa1453670:intergenic | 40.0% | |
| !! | TGTCACTGTTCTTGCTGTTG+TGG | + | tig0034871:1643-1662 | Msa1453670:five_prime_UTR | 45.0% |
| !! | GTCACTGTTCTTGCTGTTGT+GGG | + | tig0034871:1644-1663 | Msa1453670:five_prime_UTR | 45.0% |
| GAAGCATGTGTGAACCTTGT+TGG | + | tig0034871:1678-1697 | Msa1453670:five_prime_UTR | 45.0% | |
| !! | TTGTTTGTGGGGTGTTGACA+AGG | + | tig0034871:1798-1817 | Msa1453670:five_prime_UTR | 45.0% |
| GAGTGTGAACAGTTCCTGTA+AGG | + | tig0034871:2086-2105 | Msa1453670:CDS | 45.0% | |
| GACAAGTCTTGCAACCTTAC+AGG | - | tig0034871:2103-2122 | Msa1453670:intergenic | 45.0% | |
| ! | AGCTTAGATACTGGTCTGCT+TGG | + | tig0034871:2358-2377 | Msa1453670:CDS | 45.0% |
| ! | GCTTAGATACTGGTCTGCTT+GGG | + | tig0034871:2359-2378 | Msa1453670:CDS | 45.0% |
| GAGAGGATGAGTATGAAAGC+CGG | + | tig0034871:2389-2408 | Msa1453670:CDS | 45.0% | |
| TCTTAGCAAGAGACTTGGCT+TGG | + | tig0034871:2679-2698 | Msa1453670:CDS | 45.0% | |
| GAATCGTCGAACCCAAATGA+AGG | + | tig0034871:2730-2749 | Msa1453670:CDS | 45.0% | |
| CCACCACAGTTGTTGCATAT+TGG | - | tig0034871:3088-3107 | Msa1453670:intergenic | 45.0% | |
| CCAATATGCAACAACTGTGG+TGG | + | tig0034871:3085-3104 | Msa1453670:CDS | 45.0% | |
| TTTGAGGATGGTAGAGCCAT+GGG | - | tig0034871:3247-3266 | Msa1453670:intergenic | 45.0% | |
| ATTTGAGGATGGTAGAGCCA+TGG | - | tig0034871:3248-3267 | Msa1453670:intergenic | 45.0% | |
| GCTCTACCATCCTCAAATTC+TGG | + | tig0034871:3250-3269 | Msa1453670:CDS | 45.0% | |
| ACCATCCTCAAATTCTGGTC+TGG | + | tig0034871:3255-3274 | Msa1453670:CDS | 45.0% | |
| TCCAGACCAGAATTTGAGGA+TGG | - | tig0034871:3259-3278 | Msa1453670:intergenic | 45.0% | |
| ! | TCTGGTCTGGAACTTGGTAT+CGG | + | tig0034871:3268-3287 | Msa1453670:CDS | 45.0% |
| ! | GAACTTGGTATCGGAAGGAA+CGG | + | tig0034871:3277-3296 | Msa1453670:CDS | 45.0% |
| AGATCAAGTCCCATTGGCAA+AGG | - | tig0034871:3334-3353 | Msa1453670:intergenic | 45.0% | |
| TTGCCAATGGGACTTGATCT+CGG | + | tig0034871:3334-3353 | Msa1453670:CDS | 45.0% | |
| GCCTGGTATTAGTTCACCAA+TGG | + | tig0034871:3372-3391 | Msa1453670:CDS | 45.0% | |
| CCCATTGGTGAACTAATACC+AGG | - | tig0034871:3376-3395 | Msa1453670:intergenic | 45.0% | |
| CTACTTCCCATCAATCCCAT+TGG | - | tig0034871:3391-3410 | Msa1453670:intergenic | 45.0% | |
| !! | AGATCTTGCATTGGCTGCTA+TGG | + | tig0034871:3444-3463 | Msa1453670:CDS | 45.0% |
| CTCAGACAGATAGTCCTGTT+TGG | + | tig0034871:3485-3504 | Msa1453670:CDS | 45.0% | |
| TCCTGTTTGGATTAAGGGCT+TGG | + | tig0034871:3498-3517 | Msa1453670:CDS | 45.0% | |
| TCCAAGCCCTTAATCCAAAC+AGG | - | tig0034871:3502-3521 | Msa1453670:intergenic | 45.0% | |
| GTTTGGATTAAGGGCTTGGA+TGG | + | tig0034871:3502-3521 | Msa1453670:CDS | 45.0% | |
| ! | GTTTTATCTGGTGGAATCGG+TGG | + | tig0034871:3868-3887 | Msa1453670:CDS | 45.0% |
| GGAATCGGTGGAACAAGAAA+TGG | + | tig0034871:3880-3899 | Msa1453670:CDS | 45.0% | |
| ATTGCTTTCACCACTAGTCC+CGG | + | tig0034871:4015-4034 | Msa1453670:CDS | 45.0% | |
| AGGATTCTCACTTGACGAAC+CGG | - | tig0034871:4037-4056 | Msa1453670:intergenic | 45.0% | |
| TTCTGTAAGCAGCATGCAGA+AGG | + | tig0034871:4061-4080 | Msa1453670:CDS | 45.0% | |
| AGCTGTAGAAGACTTCCTTC+TGG | + | tig0034871:4151-4170 | Msa1453670:CDS | 45.0% | |
| TGTACGAGACCAATATGACC+TGG | + | tig0034871:4617-4636 | Msa1453670:intron | 45.0% | |
| GAACTGGATCCAGGTCATAT+TGG | - | tig0034871:4629-4648 | Msa1453670:intergenic | 45.0% | |
| TAGCATTAGCAGCAGAGAAC+TGG | - | tig0034871:4645-4664 | Msa1453670:intergenic | 45.0% | |
| TAAGCAACGGACGATAGAGT+TGG | - | tig0034871:5028-5047 | Msa1453670:intergenic | 45.0% | |
| TTGGATTTGGCGCTCATAGA+TGG | + | tig0034871:5057-5076 | Msa1453670:CDS | 45.0% | |
| TTGAGATGGAAGAGGACATG+AGG | - | tig0034871:5121-5140 | Msa1453670:intergenic | 45.0% | |
| GGTGTGATCATCGTTTGAGA+TGG | - | tig0034871:5135-5154 | Msa1453670:intergenic | 45.0% | |
| ACATGCTTCTTCTACCAGCT+TGG | - | tig0034871:5264-5283 | Msa1453670:intergenic | 45.0% | |
| GACCAACAACTTCTGTTCTG+GGG | + | tig0034871:5303-5322 | Msa1453670:CDS | 45.0% | |
| AACCCCAGAACAGAAGTTGT+TGG | - | tig0034871:5308-5327 | Msa1453670:intergenic | 45.0% | |
| GTGCTTCATCTGCCAGAAAA+TGG | + | tig0034871:5329-5348 | Msa1453670:CDS | 45.0% | |
| AAAATGGGACAGCCTCCAAA+TGG | + | tig0034871:5345-5364 | Msa1453670:CDS | 45.0% | |
| AAATGGGACAGCCTCCAAAT+GGG | + | tig0034871:5346-5365 | Msa1453670:CDS | 45.0% | |
| TTAGCGCTGCAACATCTGTT+TGG | + | tig0034871:5443-5462 | Msa1453670:CDS | 45.0% | |
| ATGAAAGGCTTAGAAGCGAG+TGG | + | tig0034871:5506-5525 | Msa1453670:CDS | 45.0% | |
| TGAAAGGCTTAGAAGCGAGT+GGG | + | tig0034871:5507-5526 | Msa1453670:CDS | 45.0% | |
| GAGATGGTTCACATTGCCAA+AGG | + | tig0034871:5559-5578 | Msa1453670:CDS | 45.0% | |
| GTTCACATTGCCAAAGGTCA+AGG | + | tig0034871:5565-5584 | Msa1453670:CDS | 45.0% | |
| TTCAATGATTGCCCGTCAAC+TGG | - | tig0034871:5920-5939 | Msa1453670:intergenic | 45.0% | |
| ! | TGACGGGCAATCATTGAATG+TGG | + | tig0034871:5922-5941 | Msa1453670:CDS | 45.0% |
| ! | TTGAATGTGGTGATGAGTGG+TGG | + | tig0034871:5935-5954 | Msa1453670:CDS | 45.0% |
| TATGTTGCACTCTTGCCTTC+AGG | + | tig0034871:5968-5987 | Msa1453670:CDS | 45.0% | |
| GGAACAATTGCAAAGCCTGA+AGG | - | tig0034871:5986-6005 | Msa1453670:intergenic | 45.0% | |
| ACTTTACAGAAAGGTGGTGC+TGG | + | tig0034871:6046-6065 | Msa1453670:CDS | 45.0% | |
| CACAGTCGGATTCCAAATTC+TGG | + | tig0034871:6090-6109 | Msa1453670:CDS | 45.0% | |
| ! | AACTGACTCCATTGTGAGCT+TGG | - | tig0034871:6134-6153 | Msa1453670:intergenic | 45.0% |
| CAAGAACGAACCGCGAAAAA+AGG | + | tig0034871:6359-6378 | Msa1453670:three_prime_UTR | 45.0% | |
| GAATGCAAAGACTAACTCGC+AGG | - | tig0034871:6479-6498 | Msa1453670:intergenic | 45.0% | |
| !! | CAGAGTGAGATTGGTCTCAC+TGG | + | tig0034871:2331-2350 | Msa1453670:CDS | 50.0% |
| TCTGCTTGGGAGAATGAGAG+AGG | + | tig0034871:2372-2391 | Msa1453670:CDS | 50.0% | |
| GATGAGTATGAAAGCCGGTC+CGG | + | tig0034871:2394-2413 | Msa1453670:CDS | 50.0% | |
| CAAAGTTATCGCTTCCGGAC+CGG | - | tig0034871:2411-2430 | Msa1453670:intergenic | 50.0% | |
| ! | TCTGGTGATGATCAGGATGG+TGG | + | tig0034871:2445-2464 | Msa1453670:CDS | 50.0% |
| ! | GATCAGGATGGTGGTGATGA+TGG | + | tig0034871:2454-2473 | Msa1453670:CDS | 50.0% |
| CGATCTGAGTTGCGGCATTA+AGG | + | tig0034871:2799-2818 | Msa1453670:intron | 50.0% | |
| ! | GTCTGGAACTTGGTATCGGA+AGG | + | tig0034871:3272-3291 | Msa1453670:CDS | 50.0% |
| !! | GGTATCGGAAGGAACGGTTT+TGG | + | tig0034871:3283-3302 | Msa1453670:CDS | 50.0% |
| !! | ATCGGAAGGAACGGTTTTGG+TGG | + | tig0034871:3286-3305 | Msa1453670:CDS | 50.0% |
| CATTGGCAAAGGATTGCCGA+GGG | - | tig0034871:3323-3342 | Msa1453670:intergenic | 50.0% | |
| CTCGGCAATCCTTTGCCAAT+GGG | + | tig0034871:3322-3341 | Msa1453670:CDS | 50.0% | |
| TCTCCGAGATCAAGTCCCAT+TGG | - | tig0034871:3340-3359 | Msa1453670:intergenic | 50.0% | |
| ATGGGACTTGATCTCGGAGA+TGG | + | tig0034871:3340-3359 | Msa1453670:CDS | 50.0% | |
| ! | TGTATTGGTCCTAAACCCGC+TGG | + | tig0034871:3574-3593 | Msa1453670:CDS | 50.0% |
| AGCTTCAGCGACAAAACCAG+CGG | - | tig0034871:3593-3612 | Msa1453670:intergenic | 50.0% | |
| GCTGAAGCTACGAGAGAAAC+CGG | + | tig0034871:3604-3623 | Msa1453670:CDS | 50.0% | |
| CTGAAGCTACGAGAGAAACC+GGG | + | tig0034871:3605-3624 | Msa1453670:CDS | 50.0% | |
| GGATTCTCACTTGACGAACC+GGG | - | tig0034871:4036-4055 | Msa1453670:intergenic | 50.0% | |
| ! | CATGCTGCTTACAGAACCGA+AGG | - | tig0034871:4057-4076 | Msa1453670:intergenic | 50.0% |
| ! | AGCAGCATGCAGAAGGTGTA+TGG | + | tig0034871:4068-4087 | Msa1453670:CDS | 50.0% |
| ! | GCAGCATGCAGAAGGTGTAT+GGG | + | tig0034871:4069-4088 | Msa1453670:CDS | 50.0% |
| ! | TCCTTCTGGCTGTATTGTGC+AGG | + | tig0034871:4165-4184 | Msa1453670:CDS | 50.0% |
| TCCTGCACAATACAGCCAGA+AGG | - | tig0034871:4169-4188 | Msa1453670:intergenic | 50.0% | |
| AGGTCACTTGGATTGAGCAC+TGG | + | tig0034871:4979-4998 | Msa1453670:intron | 50.0% | |
| GGTCACTTGGATTGAGCACT+GGG | + | tig0034871:4980-4999 | Msa1453670:intron | 50.0% | |
| ! | TTTGCAGCATTGAGCCAAGC+TGG | + | tig0034871:5247-5266 | Msa1453670:intron | 50.0% |
| ! | TTGGAGGCTGTCCCATTTTC+TGG | - | tig0034871:5344-5363 | Msa1453670:intergenic | 50.0% |
| AATGGGACAGCCTCCAAATG+GGG | + | tig0034871:5347-5366 | Msa1453670:CDS | 50.0% | |
| CATCACTCAGAGTCCCCATT+TGG | - | tig0034871:5363-5382 | Msa1453670:intergenic | 50.0% | |
| ATTGCCAAAGGTCAAGGGCA+AGG | + | tig0034871:5571-5590 | Msa1453670:CDS | 50.0% | |
| GTTTCCTTGCCCTTGACCTT+TGG | - | tig0034871:5578-5597 | Msa1453670:intergenic | 50.0% | |
| GATGGATACATCTTGCTCGG+TGG | + | tig0034871:5883-5902 | Msa1453670:CDS | 50.0% | |
| GTGGTGTATGCACCAGTTGA+CGG | + | tig0034871:5905-5924 | Msa1453670:CDS | 50.0% | |
| TGGTGTATGCACCAGTTGAC+GGG | + | tig0034871:5906-5925 | Msa1453670:CDS | 50.0% | |
| GGTAATGATCCCTCTGGCTA+CGG | + | tig0034871:6010-6029 | Msa1453670:CDS | 50.0% | |
| TTTGACAAGCCGTAGCCAGA+GGG | - | tig0034871:6022-6041 | Msa1453670:intergenic | 50.0% | |
| ATTTGACAAGCCGTAGCCAG+AGG | - | tig0034871:6023-6042 | Msa1453670:intergenic | 50.0% | |
| TCTGGCTACGGCTTGTCAAA+TGG | + | tig0034871:6022-6041 | Msa1453670:CDS | 50.0% | |
| ! | GGTGGAAGTTTGCTCACAGT+CGG | + | tig0034871:6076-6095 | Msa1453670:CDS | 50.0% |
| TCCAACTGCCAAGCTCACAA+TGG | + | tig0034871:6123-6142 | Msa1453670:CDS | 50.0% | |
| TCCATTGTGAGCTTGGCAGT+TGG | - | tig0034871:6127-6146 | Msa1453670:intergenic | 50.0% | |
| ACCGCGAAAAAAGGAACTCG+TGG | + | tig0034871:6368-6387 | Msa1453670:three_prime_UTR | 50.0% | |
| !!! | GCCACGAGTTCCTTTTTTCG+CGG | - | tig0034871:6372-6391 | Msa1453670:intergenic | 50.0% |
| ATGGAGGGGCAGAGTGAGAT+TGG | + | tig0034871:2322-2341 | Msa1453670:CDS | 55.0% | |
| !! | GTGATGATGGTCAGCGCAAG+AGG | + | tig0034871:2467-2486 | Msa1453670:CDS | 55.0% |
| TGCAGTCGCGATCTGAGTTG+CGG | + | tig0034871:2791-2810 | Msa1453670:intron | 55.0% | |
| CGGCTTAGGCAACCTTGTTG+TGG | - | tig0034871:2837-2856 | Msa1453670:intergenic | 55.0% | |
| !! | TGTGGTGGACCAGCAATTCC+TGG | + | tig0034871:3100-3119 | Msa1453670:CDS | 55.0% |
| !! | GGAAGGAACGGTTTTGGTGG+TGG | + | tig0034871:3289-3308 | Msa1453670:CDS | 55.0% |
| CCATTGGCAAAGGATTGCCG+AGG | - | tig0034871:3324-3343 | Msa1453670:intergenic | 55.0% | |
| CCTCGGCAATCCTTTGCCAA+TGG | + | tig0034871:3321-3340 | Msa1453670:CDS | 55.0% | |
| ! | GCGACAAAACCAGCGGGTTT+AGG | - | tig0034871:3586-3605 | Msa1453670:intergenic | 55.0% |
| GCTTCAGCGACAAAACCAGC+GGG | - | tig0034871:3592-3611 | Msa1453670:intergenic | 55.0% | |
| ACTTGACGAACCGGGACTAG+TGG | - | tig0034871:4028-4047 | Msa1453670:intergenic | 55.0% | |
| AGCAGCAGAGAACTGGATCC+AGG | - | tig0034871:4638-4657 | Msa1453670:intergenic | 55.0% | |
| GAGGTGAATCCCGACACACT+TGG | - | tig0034871:4771-4790 | Msa1453670:intergenic | 55.0% | |
| ! | TTCACACTGCCTTTGGAGGG+TGG | - | tig0034871:5087-5106 | Msa1453670:intergenic | 55.0% |
| ACCCTCCAAAGGCAGTGTGA+AGG | + | tig0034871:5086-5105 | Msa1453670:CDS | 55.0% | |
| GCCTTCACACTGCCTTTGGA+GGG | - | tig0034871:5090-5109 | Msa1453670:intergenic | 55.0% | |
| AGCCTTCACACTGCCTTTGG+AGG | - | tig0034871:5091-5110 | Msa1453670:intergenic | 55.0% | |
| CCAAGCCTTCACACTGCCTT+TGG | - | tig0034871:5094-5113 | Msa1453670:intergenic | 55.0% | |
| CCAAAGGCAGTGTGAAGGCT+TGG | + | tig0034871:5091-5110 | Msa1453670:CDS | 55.0% | |
| CACTCAGAGTCCCCATTTGG+AGG | - | tig0034871:5360-5379 | Msa1453670:intergenic | 55.0% | |
| TGCAGCGCTAAGCACGATAC+CGG | - | tig0034871:5434-5453 | Msa1453670:intergenic | 55.0% | |
| ! | TGGTGGACCCATGCAAGAGA+TGG | + | tig0034871:5543-5562 | Msa1453670:CDS | 55.0% |
| ! | GGATACATCTTGCTCGGTGG+TGG | + | tig0034871:5886-5905 | Msa1453670:CDS | 55.0% |
| ! | GGTGGTGGTTCAAGCTCCCT+CGG | + | tig0034871:3304-3323 | Msa1453670:CDS | 60.0% |
| GGAGATGGTCGCTCAATGCC+TGG | + | tig0034871:3355-3374 | Msa1453670:CDS | 60.0% | |
| ! | TGCAGAAGGTGTATGGGCCG+TGG | + | tig0034871:4075-4094 | Msa1453670:CDS | 60.0% |
| GATGGATCGCCACCCTCCAA+AGG | + | tig0034871:5075-5094 | Msa1453670:CDS | 60.0% | |
| GCAGCGCTAAGCACGATACC+GGG | - | tig0034871:5433-5452 | Msa1453670:intergenic | 60.0% | |
| !! | CAGAAAGGTGGTGCTGGCGA+TGG | + | tig0034871:6052-6071 | Msa1453670:CDS | 60.0% |
| !! | AAAGGTGGTGCTGGCGATGG+TGG | + | tig0034871:6055-6074 | Msa1453670:CDS | 60.0% |
| GGAACTCGTGGCGTTGCTGA+TGG | + | tig0034871:6380-6399 | Msa1453670:three_prime_UTR | 60.0% | |
| GCGCTAAGCACGATACCGGG+AGG | - | tig0034871:5430-5449 | Msa1453670:intergenic | 65.0% | |
| GATGACCCTGGCGAGCCTCC+CGG | + | tig0034871:5412-5431 | Msa1453670:CDS | 70.0% | |
| CGATACCGGGAGGCTCGCCA+GGG | - | tig0034871:5420-5439 | Msa1453670:intergenic | 70.0% | |
| ACGATACCGGGAGGCTCGCC+AGG | - | tig0034871:5421-5440 | Msa1453670:intergenic | 70.0% | |
| !! | GGTGGTGCTGGCGATGGTGG+TGG | + | tig0034871:6058-6077 | Msa1453670:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0034871 | gene | 1506 | 6599 | 1506 | ID=Msa1453670;Name=Msa1453670 |
| tig0034871 | mRNA | 1506 | 6599 | 1506 | ID=Msa1453670-mRNA-1;Parent=Msa1453670;Name=Msa1453670-mRNA-1;_AED=0.09;_eAED=0.09;_QI=569|1|1|1|0.87|0.77|9|380|792 |
| tig0034871 | exon | 1506 | 2182 | 1506 | ID=Msa1453670-mRNA-1:exon:19259;Parent=Msa1453670-mRNA-1 |
| tig0034871 | exon | 2313 | 2539 | 2313 | ID=Msa1453670-mRNA-1:exon:19260;Parent=Msa1453670-mRNA-1 |
| tig0034871 | exon | 2634 | 2751 | 2634 | ID=Msa1453670-mRNA-1:exon:19261;Parent=Msa1453670-mRNA-1 |
| tig0034871 | exon | 2992 | 3675 | 2992 | ID=Msa1453670-mRNA-1:exon:19262;Parent=Msa1453670-mRNA-1 |
| tig0034871 | exon | 3814 | 3915 | 3814 | ID=Msa1453670-mRNA-1:exon:19263;Parent=Msa1453670-mRNA-1 |
| tig0034871 | exon | 3998 | 4210 | 3998 | ID=Msa1453670-mRNA-1:exon:19264;Parent=Msa1453670-mRNA-1 |
| tig0034871 | exon | 4981 | 5155 | 4981 | ID=Msa1453670-mRNA-1:exon:19265;Parent=Msa1453670-mRNA-1 |
| tig0034871 | exon | 5254 | 5621 | 5254 | ID=Msa1453670-mRNA-1:exon:19266;Parent=Msa1453670-mRNA-1 |
| tig0034871 | exon | 5836 | 6599 | 5836 | ID=Msa1453670-mRNA-1:exon:19267;Parent=Msa1453670-mRNA-1 |
| tig0034871 | five_prime_UTR | 1506 | 2074 | 1506 | ID=Msa1453670-mRNA-1:five_prime_utr;Parent=Msa1453670-mRNA-1 |
| tig0034871 | CDS | 2075 | 2182 | 2075 | ID=Msa1453670-mRNA-1:cds;Parent=Msa1453670-mRNA-1 |
| tig0034871 | CDS | 2313 | 2539 | 2313 | ID=Msa1453670-mRNA-1:cds;Parent=Msa1453670-mRNA-1 |
| tig0034871 | CDS | 2634 | 2751 | 2634 | ID=Msa1453670-mRNA-1:cds;Parent=Msa1453670-mRNA-1 |
| tig0034871 | CDS | 2992 | 3675 | 2992 | ID=Msa1453670-mRNA-1:cds;Parent=Msa1453670-mRNA-1 |
| tig0034871 | CDS | 3814 | 3915 | 3814 | ID=Msa1453670-mRNA-1:cds;Parent=Msa1453670-mRNA-1 |
| tig0034871 | CDS | 3998 | 4210 | 3998 | ID=Msa1453670-mRNA-1:cds;Parent=Msa1453670-mRNA-1 |
| tig0034871 | CDS | 4981 | 5155 | 4981 | ID=Msa1453670-mRNA-1:cds;Parent=Msa1453670-mRNA-1 |
| tig0034871 | CDS | 5254 | 5621 | 5254 | ID=Msa1453670-mRNA-1:cds;Parent=Msa1453670-mRNA-1 |
| tig0034871 | CDS | 5836 | 6219 | 5836 | ID=Msa1453670-mRNA-1:cds;Parent=Msa1453670-mRNA-1 |
| tig0034871 | three_prime_UTR | 6220 | 6599 | 6220 | ID=Msa1453670-mRNA-1:three_prime_utr;Parent=Msa1453670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
