Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0244040 | XP_013441887.1 | 80.427 | 281 | 27 | 4 | 1 | 255 | 1 | 279 | 3.71e-154 | 453 |
| Msa0244040 | XP_013441887.1 | 84.918 | 305 | 43 | 2 | 239 | 542 | 8 | 310 | 0.0 | 531 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0244040 | sp|Q7M443|CHIT2_TULSB | 33.333 | 282 | 152 | 10 | 269 | 541 | 21 | 275 | 3.55e-30 | 122 |
| Msa0244040 | sp|Q7M443|CHIT2_TULSB | 29.151 | 271 | 140 | 11 | 15 | 255 | 1 | 249 | 6.36e-18 | 87.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0244040 | A0A072TEX8 | 80.427 | 281 | 27 | 4 | 1 | 255 | 1 | 279 | 1.77e-154 | 453 |
| Msa0244040 | A0A072TEX8 | 84.918 | 305 | 43 | 2 | 239 | 542 | 8 | 310 | 0.0 | 531 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0201430 | Msa0244040 | 0.888537 | 5.407666e-73 | -8.615850e-47 |
| Msa0201440 | Msa0244040 | 0.905593 | 3.642582e-80 | -8.615850e-47 |
| Msa0201450 | Msa0244040 | 0.909228 | 7.184668e-82 | -8.615850e-47 |
| Msa0201460 | Msa0244040 | 0.903545 | 3.104120e-79 | -8.615850e-47 |
| Msa0201470 | Msa0244040 | 0.863872 | 1.825805e-64 | -8.615850e-47 |
| Msa0244020 | Msa0244040 | 0.954370 | 3.447048e-112 | -8.615850e-47 |
| Msa0244030 | Msa0244040 | 0.949358 | 1.495502e-107 | -8.615850e-47 |
| Msa0244040 | Msa0244050 | 0.895810 | 6.728224e-76 | -8.615850e-47 |
| Msa0244040 | Msa0244060 | 0.947684 | 4.161250e-106 | -8.615850e-47 |
| Msa0244040 | Msa0244070 | 0.956549 | 2.270259e-114 | -8.615850e-47 |
| Msa0244040 | Msa0244080 | 0.935943 | 3.818761e-97 | -8.615850e-47 |
| Msa0244040 | Msa0282910 | 0.910268 | 2.266246e-82 | -8.615850e-47 |
| Msa0244040 | Msa0282920 | 0.937202 | 5.079454e-98 | -8.615850e-47 |
| Msa0244040 | Msa0282930 | 0.855096 | 7.931683e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0244040 | MtrunA17_Chr2g0303381 | 84.918 | 305 | 43 | 2 | 239 | 542 | 8 | 310 | 0.0 | 531 |
| Msa0244040 | MtrunA17_Chr2g0303381 | 80.427 | 281 | 27 | 4 | 1 | 255 | 1 | 279 | 3.41e-158 | 453 |
| Msa0244040 | MtrunA17_Chr2g0303401 | 84.918 | 305 | 43 | 2 | 239 | 542 | 8 | 310 | 0.0 | 531 |
| Msa0244040 | MtrunA17_Chr2g0303401 | 80.427 | 281 | 27 | 4 | 1 | 255 | 1 | 279 | 3.41e-158 | 453 |
| Msa0244040 | MtrunA17_Chr8g0350531 | 44.774 | 574 | 251 | 10 | 12 | 541 | 12 | 563 | 1.25e-150 | 443 |
| Msa0244040 | MtrunA17_Chr2g0297811 | 54.870 | 308 | 130 | 6 | 239 | 542 | 7 | 309 | 5.32e-96 | 294 |
| Msa0244040 | MtrunA17_Chr2g0297811 | 53.597 | 278 | 101 | 7 | 4 | 255 | 3 | 278 | 8.31e-78 | 247 |
| Msa0244040 | MtrunA17_Chr2g0297801 | 54.870 | 308 | 130 | 6 | 239 | 542 | 7 | 309 | 5.32e-96 | 294 |
| Msa0244040 | MtrunA17_Chr2g0297801 | 53.597 | 278 | 101 | 7 | 4 | 255 | 3 | 278 | 8.31e-78 | 247 |
| Msa0244040 | MtrunA17_Chr2g0297791 | 54.870 | 308 | 130 | 6 | 239 | 542 | 7 | 309 | 5.32e-96 | 294 |
| Msa0244040 | MtrunA17_Chr2g0297791 | 53.597 | 278 | 101 | 7 | 4 | 255 | 3 | 278 | 8.31e-78 | 247 |
| Msa0244040 | MtrunA17_Chr2g0297731 | 45.875 | 303 | 141 | 7 | 249 | 539 | 6 | 297 | 1.35e-81 | 256 |
| Msa0244040 | MtrunA17_Chr2g0297731 | 44.043 | 277 | 111 | 9 | 14 | 255 | 2 | 269 | 2.87e-61 | 204 |
| Msa0244040 | MtrunA17_Chr8g0350511 | 46.622 | 296 | 141 | 4 | 249 | 541 | 18 | 299 | 4.48e-80 | 253 |
| Msa0244040 | MtrunA17_Chr8g0350511 | 45.149 | 268 | 115 | 5 | 12 | 255 | 12 | 271 | 6.42e-64 | 211 |
| Msa0244040 | MtrunA17_Chr8g0350521 | 46.622 | 296 | 141 | 4 | 249 | 541 | 18 | 299 | 4.48e-80 | 253 |
| Msa0244040 | MtrunA17_Chr8g0350521 | 45.149 | 268 | 115 | 5 | 12 | 255 | 12 | 271 | 6.42e-64 | 211 |
| Msa0244040 | MtrunA17_Chr8g0350541 | 46.622 | 296 | 141 | 4 | 249 | 541 | 18 | 299 | 4.48e-80 | 253 |
| Msa0244040 | MtrunA17_Chr8g0350541 | 45.149 | 268 | 115 | 5 | 12 | 255 | 12 | 271 | 6.42e-64 | 211 |
| Msa0244040 | MtrunA17_Chr8g0350501 | 46.622 | 296 | 141 | 4 | 249 | 541 | 18 | 299 | 4.48e-80 | 253 |
| Msa0244040 | MtrunA17_Chr8g0350501 | 45.149 | 268 | 115 | 5 | 12 | 255 | 12 | 271 | 6.42e-64 | 211 |
| Msa0244040 | MtrunA17_Chr8g0350551 | 43.581 | 296 | 136 | 4 | 249 | 541 | 18 | 285 | 1.34e-70 | 228 |
| Msa0244040 | MtrunA17_Chr8g0350551 | 42.857 | 266 | 110 | 6 | 12 | 255 | 12 | 257 | 8.22e-54 | 184 |
| Msa0244040 | MtrunA17_Chr2g0297761 | 46.048 | 291 | 132 | 10 | 261 | 539 | 18 | 295 | 8.95e-70 | 226 |
| Msa0244040 | MtrunA17_Chr2g0297761 | 44.000 | 275 | 108 | 12 | 16 | 255 | 4 | 267 | 1.22e-53 | 183 |
| Msa0244040 | MtrunA17_Chr2g0297771 | 46.048 | 291 | 132 | 10 | 261 | 539 | 18 | 295 | 8.95e-70 | 226 |
| Msa0244040 | MtrunA17_Chr2g0297771 | 44.000 | 275 | 108 | 12 | 16 | 255 | 4 | 267 | 1.22e-53 | 183 |
| Msa0244040 | MtrunA17_Chr2g0297781 | 46.048 | 291 | 132 | 10 | 261 | 539 | 18 | 295 | 8.95e-70 | 226 |
| Msa0244040 | MtrunA17_Chr2g0297781 | 44.000 | 275 | 108 | 12 | 16 | 255 | 4 | 267 | 1.22e-53 | 183 |
| Msa0244040 | MtrunA17_Chr8g0350441 | 40.476 | 294 | 154 | 7 | 249 | 540 | 17 | 291 | 4.25e-64 | 211 |
| Msa0244040 | MtrunA17_Chr8g0350441 | 40.377 | 265 | 124 | 8 | 14 | 255 | 13 | 266 | 1.81e-50 | 175 |
| Msa0244040 | MtrunA17_Chr8g0350431 | 40.690 | 290 | 151 | 7 | 249 | 536 | 17 | 287 | 3.47e-61 | 203 |
| Msa0244040 | MtrunA17_Chr8g0350431 | 40.000 | 265 | 125 | 8 | 14 | 255 | 13 | 266 | 8.73e-48 | 168 |
| Msa0244040 | MtrunA17_Chr8g0350421 | 40.690 | 290 | 151 | 7 | 249 | 536 | 17 | 287 | 3.47e-61 | 203 |
| Msa0244040 | MtrunA17_Chr8g0350421 | 40.000 | 265 | 125 | 8 | 14 | 255 | 13 | 266 | 8.73e-48 | 168 |
| Msa0244040 | MtrunA17_Chr8g0350411 | 40.690 | 290 | 151 | 7 | 249 | 536 | 17 | 287 | 3.47e-61 | 203 |
| Msa0244040 | MtrunA17_Chr8g0350411 | 40.000 | 265 | 125 | 8 | 14 | 255 | 13 | 266 | 8.73e-48 | 168 |
| Msa0244040 | MtrunA17_Chr8g0350451 | 40.925 | 281 | 131 | 7 | 264 | 542 | 31 | 278 | 3.63e-53 | 181 |
| Msa0244040 | MtrunA17_Chr8g0350451 | 40.741 | 270 | 119 | 10 | 9 | 255 | 9 | 260 | 8.63e-44 | 156 |
| Msa0244040 | MtrunA17_Chr8g0350461 | 40.925 | 281 | 131 | 7 | 264 | 542 | 31 | 278 | 3.63e-53 | 181 |
| Msa0244040 | MtrunA17_Chr8g0350461 | 40.741 | 270 | 119 | 10 | 9 | 255 | 9 | 260 | 8.63e-44 | 156 |
| Msa0244040 | MtrunA17_Chr8g0350471 | 40.925 | 281 | 131 | 7 | 264 | 542 | 31 | 278 | 3.63e-53 | 181 |
| Msa0244040 | MtrunA17_Chr8g0350471 | 40.741 | 270 | 119 | 10 | 9 | 255 | 9 | 260 | 8.63e-44 | 156 |
| Msa0244040 | MtrunA17_Chr6g0481561 | 30.137 | 292 | 164 | 10 | 241 | 518 | 23 | 288 | 1.35e-26 | 110 |
| Msa0244040 | MtrunA17_Chr6g0481561 | 27.407 | 270 | 144 | 11 | 16 | 255 | 34 | 281 | 1.54e-15 | 77.8 |
| Msa0244040 | MtrunA17_Chr2g0327611 | 31.301 | 246 | 144 | 9 | 273 | 510 | 49 | 277 | 2.71e-26 | 108 |
| Msa0244040 | MtrunA17_Chr2g0327611 | 29.565 | 230 | 119 | 9 | 15 | 222 | 28 | 236 | 2.09e-17 | 82.8 |
| Msa0244040 | MtrunA17_Chr2g0327601 | 31.923 | 260 | 143 | 9 | 269 | 518 | 50 | 285 | 4.63e-24 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 113 sgRNAs with CRISPR-Local
Find 345 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAAAATCATCTAAAGTTTC+TGG | 0.145221 | 2_2:+22001234 | None:intergenic |
| GGAAAATCATCTAAAGTTTC+TGG | 0.145221 | 2_2:+22006154 | None:intergenic |
| AATCAATTCCACTTCATTCT+AGG | 0.205618 | 2_2:-22001186 | Msa0244040:CDS |
| AATCAATTCCACTTCATTCT+AGG | 0.205618 | 2_2:-22006106 | Msa0244040:CDS |
| CCCACTACCACAAATTGTTT+TGG | 0.245343 | 2_2:-22000720 | Msa0244040:CDS |
| CCCACTACCACAAATTGTTT+TGG | 0.245343 | 2_2:-22005640 | Msa0244040:CDS |
| TGTAGCTAGTAATCAATTAT+TGG | 0.249179 | 2_2:+22000387 | None:intergenic |
| ATTCAATCCTAAGGAGAAAA+AGG | 0.297710 | 2_2:-22001004 | Msa0244040:CDS |
| ATTCAATCCTAAGGAGAAAA+AGG | 0.297710 | 2_2:-22005924 | Msa0244040:CDS |
| GGACACATATTCCATGGATT+TGG | 0.302531 | 2_2:+22000768 | None:intergenic |
| GGACACATATTCCATGGATT+TGG | 0.302531 | 2_2:+22005688 | None:intergenic |
| TTACGGTGAGCTTAAACTTT+TGG | 0.347612 | 2_2:-22000596 | Msa0244040:CDS |
| GATATGTCTGATCGAGCTTA+TGG | 0.361529 | 2_2:+22000966 | None:intergenic |
| GATATGTCTGATCGAGCTTA+TGG | 0.361529 | 2_2:+22005886 | None:intergenic |
| CCCAAAACAATTTGTGGTAG+TGG | 0.365132 | 2_2:+22000719 | None:intergenic |
| CCCAAAACAATTTGTGGTAG+TGG | 0.365132 | 2_2:+22005639 | None:intergenic |
| TACCTTGTCAATGATGATTC+TGG | 0.380807 | 2_2:-22000925 | Msa0244040:CDS |
| TACCTTGTCAATGATGATTC+TGG | 0.380807 | 2_2:-22005845 | Msa0244040:CDS |
| CGGGACATTTCGTTCGCGAT+TGG | 0.385507 | 2_2:-22001128 | Msa0244040:CDS |
| CGGGACATTTCGTTCGCGAT+TGG | 0.385507 | 2_2:-22006048 | Msa0244040:CDS |
| TCATCATTGATGATATTAAC+AGG | 0.403312 | 2_2:+22001213 | None:intergenic |
| ACAATTTGTGGTAGTGGGCT+TGG | 0.408360 | 2_2:+22000725 | None:intergenic |
| ACAATTTGTGGTAGTGGGCT+TGG | 0.408360 | 2_2:+22005645 | None:intergenic |
| CACTGCACTAGCATAATTGA+TGG | 0.434540 | 2_2:-22000895 | Msa0244040:CDS |
| CACTGCACTAGCATAATTGA+TGG | 0.434540 | 2_2:-22005815 | Msa0244040:CDS |
| AATCAACTAATAACGGATTA+CGG | 0.451454 | 2_2:-22000613 | Msa0244040:CDS |
| AATCAACTAATAACGGATTA+CGG | 0.451454 | 2_2:-22005533 | Msa0244040:intron |
| ATCATCAAACTCATCCTTTG+AGG | 0.453286 | 2_2:+22000642 | None:intergenic |
| ATCATCAAACTCATCCTTTG+AGG | 0.453286 | 2_2:+22005562 | None:intergenic |
| CGGTTCATCTTAGTATCAGC+TGG | 0.454457 | 2_2:+22000556 | None:intergenic |
| CGGTTCATCTTAGTATCAGC+TGG | 0.454457 | 2_2:+22005476 | None:intergenic |
| GAAAATCATCTAAAGTTTCT+GGG | 0.456174 | 2_2:+22001235 | None:intergenic |
| GAAAATCATCTAAAGTTTCT+GGG | 0.456174 | 2_2:+22006155 | None:intergenic |
| AGCATTTCCTCCAAGATGTA+AGG | 0.467593 | 2_2:+22000424 | None:intergenic |
| TGTGGTCCCAAAACAATTTG+TGG | 0.468651 | 2_2:+22000713 | None:intergenic |
| TGTGGTCCCAAAACAATTTG+TGG | 0.468651 | 2_2:+22005633 | None:intergenic |
| TCATCATTGATGATATCAAC+AGG | 0.470136 | 2_2:+22006133 | None:intergenic |
| GATGTCATTGCTCGGTGGGT+TGG | 0.481116 | 2_2:+22000450 | None:intergenic |
| TATATCGATTCTAGTGTGAC+TGG | 0.486159 | 2_2:-22000853 | Msa0244040:CDS |
| TATATCGATTCTAGTGTGAC+TGG | 0.486159 | 2_2:-22005773 | Msa0244040:CDS |
| GCCACTGAGGTGTATAAAGA+TGG | 0.489071 | 2_2:-22001159 | Msa0244040:CDS |
| GCCACTGAGGTGTATAAAGA+TGG | 0.489071 | 2_2:-22006079 | Msa0244040:CDS |
| AACCGAGAGGTGTTCATTGA+GGG | 0.499384 | 2_2:-22000538 | Msa0244040:CDS |
| AACCGAGAGGTGTTCATTGA+GGG | 0.499384 | 2_2:-22005458 | Msa0244040:CDS |
| CGCCCTCAATGAACACCTCT+CGG | 0.504404 | 2_2:+22000536 | None:intergenic |
| CGCCCTCAATGAACACCTCT+CGG | 0.504404 | 2_2:+22005456 | None:intergenic |
| TGACATCGAGCCTTACATCT+TGG | 0.507062 | 2_2:-22000434 | Msa0244040:CDS |
| TCTCTACAATCAACTAATAA+CGG | 0.510522 | 2_2:-22000620 | Msa0244040:CDS |
| TCTCTACAATCAACTAATAA+CGG | 0.510522 | 2_2:-22005540 | Msa0244040:CDS |
| CCAAAACAATTTGTGGTAGT+GGG | 0.514829 | 2_2:+22000720 | None:intergenic |
| CCAAAACAATTTGTGGTAGT+GGG | 0.514829 | 2_2:+22005640 | None:intergenic |
| TATAAAGATGGAAAAGGAAC+GGG | 0.518546 | 2_2:-22001147 | Msa0244040:CDS |
| TATAAAGATGGAAAAGGAAC+GGG | 0.518546 | 2_2:-22006067 | Msa0244040:CDS |
| CTAGTAATCAATTATTGGTA+AGG | 0.518596 | 2_2:+22000392 | None:intergenic |
| ATCAACAGCAAATCACTCCT+TGG | 0.519679 | 2_2:-22000502 | Msa0244040:CDS |
| ATCAACAGCAAATCACTCCT+TGG | 0.519679 | 2_2:-22005422 | Msa0244040:CDS |
| TAAATATCCATTCAATCCTA+AGG | 0.520789 | 2_2:-22001013 | Msa0244040:CDS |
| TAAATATCCATTCAATCCTA+AGG | 0.520789 | 2_2:-22005933 | Msa0244040:CDS |
| GCTGACTTCTCCAACTGCAT+TGG | 0.521072 | 2_2:-22000829 | Msa0244040:CDS |
| GCTGACTTCTCCAACTGCAT+TGG | 0.521072 | 2_2:-22005749 | Msa0244040:CDS |
| AATAACTTGTCCAATGCAGT+TGG | 0.521593 | 2_2:+22000819 | None:intergenic |
| AATAACTTGTCCAATGCAGT+TGG | 0.521593 | 2_2:+22005739 | None:intergenic |
| ATTTGTGGTAGTGGGCTTGG+AGG | 0.527426 | 2_2:+22000728 | None:intergenic |
| ATTTGTGGTAGTGGGCTTGG+AGG | 0.527426 | 2_2:+22005648 | None:intergenic |
| GCTCGATGTCATTGCTCGGT+GGG | 0.532171 | 2_2:+22000446 | None:intergenic |
| GAGGAGCTCTGTCGGAGCAA+TGG | 0.538177 | 2_2:+22000747 | None:intergenic |
| GAGGAGCTCTGTCGGAGCAA+TGG | 0.538177 | 2_2:+22005667 | None:intergenic |
| ATGAAGGTTATGATAACTAT+CGG | 0.552996 | 2_2:-22001048 | Msa0244040:CDS |
| ATGAAGGTTATGATAACTAT+CGG | 0.552996 | 2_2:-22005968 | Msa0244040:intron |
| CATCGAGCCTTACATCTTGG+AGG | 0.554478 | 2_2:-22000431 | Msa0244040:CDS |
| TCGAGAATACATTGGCGTGA+AGG | 0.556428 | 2_2:-22006182 | Msa0244040:CDS |
| TAAGCATGTATCCAAATCCA+TGG | 0.557313 | 2_2:-22000779 | Msa0244040:CDS |
| TAAGCATGTATCCAAATCCA+TGG | 0.557313 | 2_2:-22005699 | Msa0244040:CDS |
| CATCTTAGTATCAGCTGGAT+CGG | 0.557541 | 2_2:+22000561 | None:intergenic |
| CATCTTAGTATCAGCTGGAT+CGG | 0.557541 | 2_2:+22005481 | None:intergenic |
| TGAATGGATATTTAGTGCCA+TGG | 0.560003 | 2_2:+22001022 | None:intergenic |
| TGAATGGATATTTAGTGCCA+TGG | 0.560003 | 2_2:+22005942 | None:intergenic |
| GAGGTGTATAAAGATGGAAA+AGG | 0.564302 | 2_2:-22001153 | Msa0244040:CDS |
| GAGGTGTATAAAGATGGAAA+AGG | 0.564302 | 2_2:-22006073 | Msa0244040:CDS |
| GAACCGAGAGGTGTTCATTG+AGG | 0.566347 | 2_2:-22000539 | Msa0244040:CDS |
| GAACCGAGAGGTGTTCATTG+AGG | 0.566347 | 2_2:-22005459 | Msa0244040:CDS |
| CAATCAAACTATATCCTCAA+AGG | 0.567378 | 2_2:-22000656 | Msa0244040:CDS |
| CAATCAAACTATATCCTCAA+AGG | 0.567378 | 2_2:-22005576 | Msa0244040:CDS |
| AGCAATGGACACATATTCCA+TGG | 0.567858 | 2_2:+22000762 | None:intergenic |
| AGCAATGGACACATATTCCA+TGG | 0.567858 | 2_2:+22005682 | None:intergenic |
| GAAAGAACACAAGAATATGA+AGG | 0.568930 | 2_2:-22001064 | Msa0244040:CDS |
| GGCTCGATGTCATTGCTCGG+TGG | 0.574776 | 2_2:+22000445 | None:intergenic |
| ATATCGATTCTAGTGTGACT+GGG | 0.576037 | 2_2:-22000852 | Msa0244040:CDS |
| ATATCGATTCTAGTGTGACT+GGG | 0.576037 | 2_2:-22005772 | Msa0244040:CDS |
| TGGGCTTGGAGGAGCTCTGT+CGG | 0.577415 | 2_2:+22000739 | None:intergenic |
| TGGGCTTGGAGGAGCTCTGT+CGG | 0.577415 | 2_2:+22005659 | None:intergenic |
| ATGATAACTATCGGAGGCCA+TGG | 0.579102 | 2_2:-22001039 | Msa0244040:CDS |
| ATGATAACTATCGGAGGCCA+TGG | 0.579102 | 2_2:-22005959 | Msa0244040:CDS |
| TAAGGCTCGATGTCATTGCT+CGG | 0.600452 | 2_2:+22000442 | None:intergenic |
| AGTTATTAAACATCTCAAGA+AGG | 0.601516 | 2_2:-22000803 | Msa0244040:CDS |
| GTATAAAGATGGAAAAGGAA+CGG | 0.613441 | 2_2:-22001148 | Msa0244040:CDS |
| GTATAAAGATGGAAAAGGAA+CGG | 0.613441 | 2_2:-22006068 | Msa0244040:CDS |
| TGGCGAAGCCTAGAATGAAG+TGG | 0.614487 | 2_2:+22001178 | None:intergenic |
| TGGCGAAGCCTAGAATGAAG+TGG | 0.614487 | 2_2:+22006098 | None:intergenic |
| TACCAGAATCATCATTGACA+AGG | 0.665409 | 2_2:+22000923 | None:intergenic |
| TACCAGAATCATCATTGACA+AGG | 0.665409 | 2_2:+22005843 | None:intergenic |
| TCCATCTTTATACACCTCAG+TGG | 0.670679 | 2_2:+22001158 | None:intergenic |
| TCCATCTTTATACACCTCAG+TGG | 0.670679 | 2_2:+22006078 | None:intergenic |
| CATCAATTATGCTAGTGCAG+TGG | 0.677859 | 2_2:+22000896 | None:intergenic |
| CATCAATTATGCTAGTGCAG+TGG | 0.677859 | 2_2:+22005816 | None:intergenic |
| CATTCTAGGCTTCGCCACTG+AGG | 0.701525 | 2_2:-22001172 | Msa0244040:CDS |
| CATTCTAGGCTTCGCCACTG+AGG | 0.701525 | 2_2:-22006092 | Msa0244040:CDS |
| AAGGTTATGATAACTATCGG+AGG | 0.701816 | 2_2:-22001045 | Msa0244040:CDS |
| AAGGTTATGATAACTATCGG+AGG | 0.701816 | 2_2:-22005965 | Msa0244040:CDS |
| TATCGATTCTAGTGTGACTG+GGG | 0.708158 | 2_2:-22000851 | Msa0244040:CDS |
| TATCGATTCTAGTGTGACTG+GGG | 0.708158 | 2_2:-22005771 | Msa0244040:CDS |
| TGATACTAAGATGAACCGAG+AGG | 0.777827 | 2_2:-22000551 | Msa0244040:CDS |
| TGATACTAAGATGAACCGAG+AGG | 0.777827 | 2_2:-22005471 | Msa0244040:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATATTTTATTTTTCGAT+CGG | - | chr2_2:22001361-22001380 | Msa0244040:intron | 10.0% |
| !!! | TTTTTTATGAAATTTTGATT+TGG | + | chr2_2:22004671-22004690 | None:intergenic | 10.0% |
| !! | TTAATTAAAATACCAATAAT+AGG | - | chr2_2:22005045-22005064 | Msa0244040:intron | 10.0% |
| !!! | TAATATTTTATTTTTCGATC+GGG | - | chr2_2:22001362-22001381 | Msa0244040:intron | 15.0% |
| !!! | GTTAATTATTTTTATCACTA+AGG | + | chr2_2:22001707-22001726 | None:intergenic | 15.0% |
| !! | ATATAAATCTATTAGTGAAT+CGG | + | chr2_2:22001763-22001782 | None:intergenic | 15.0% |
| !! | AAAAATCATTATAGGAATTA+GGG | + | chr2_2:22001796-22001815 | None:intergenic | 15.0% |
| !! | AAAAACAGAAAAATCATTAT+AGG | + | chr2_2:22001804-22001823 | None:intergenic | 15.0% |
| !! | CTAAATTTAAATCATATTAG+AGG | + | chr2_2:22002394-22002413 | None:intergenic | 15.0% |
| !! | CTCTAATATGATTTAAATTT+AGG | - | chr2_2:22002392-22002411 | Msa0244040:intron | 15.0% |
| !!! | TGTCAAATAATGTTTTTTAT+TGG | + | chr2_2:22003664-22003683 | None:intergenic | 15.0% |
| !!! | TTTTTACTATACTAAAGAAA+AGG | + | chr2_2:22003788-22003807 | None:intergenic | 15.0% |
| !! | AAAAATTATAATCAATTGGA+AGG | + | chr2_2:22003813-22003832 | None:intergenic | 15.0% |
| !! | AGCAAAAAATTATAATCAAT+TGG | + | chr2_2:22003817-22003836 | None:intergenic | 15.0% |
| !!! | TTTTTATGAGTTTATGTTTT+AGG | + | chr2_2:22004074-22004093 | None:intergenic | 15.0% |
| !! | TACAAAAAAAAACACAATAA+CGG | + | chr2_2:22004197-22004216 | None:intergenic | 15.0% |
| !! | TTATTTGTATTCAAAATTGA+GGG | + | chr2_2:22004316-22004335 | None:intergenic | 15.0% |
| !!! | TTACACTTTTTAAATGATAA+AGG | + | chr2_2:22004453-22004472 | None:intergenic | 15.0% |
| !! | TAACGTTTGAAAATTATTAA+CGG | + | chr2_2:22004698-22004717 | None:intergenic | 15.0% |
| !! | ATTCTATTAAATCAAGTATT+TGG | + | chr2_2:22005009-22005028 | None:intergenic | 15.0% |
| !!! | TAAGAATTAGTTTTTTCACT+CGG | + | chr2_2:22001571-22001590 | None:intergenic | 20.0% |
| !!! | ATTTTTATCACTAAGGTTTT+CGG | + | chr2_2:22001700-22001719 | None:intergenic | 20.0% |
| !! | TATAAATCTATTAGTGAATC+GGG | + | chr2_2:22001762-22001781 | None:intergenic | 20.0% |
| !! | AAAATCATTATAGGAATTAG+GGG | + | chr2_2:22001795-22001814 | None:intergenic | 20.0% |
| !! | GAAAAATCATTATAGGAATT+AGG | + | chr2_2:22001797-22001816 | None:intergenic | 20.0% |
| !!! | AATAATTTTTTTTTTAGGCC+TGG | - | chr2_2:22002355-22002374 | Msa0244040:intron | 20.0% |
| !! | ATAAATCTAAAAAAACCTAC+CGG | + | chr2_2:22002419-22002438 | None:intergenic | 20.0% |
| !! | TTTAATAATAGTTGTGATGA+TGG | - | chr2_2:22002697-22002716 | Msa0244040:intron | 20.0% |
| !!! | AACTTTTTATGTTCACATTA+TGG | + | chr2_2:22002924-22002943 | None:intergenic | 20.0% |
| !! | CATAAAAAGTTCTTAATGAA+AGG | - | chr2_2:22002933-22002952 | Msa0244040:intron | 20.0% |
| !! | ATTATCTAGTCAATATACTT+AGG | - | chr2_2:22003010-22003029 | Msa0244040:intron | 20.0% |
| !! | AACAAAATGTAAATCTACTT+AGG | - | chr2_2:22003376-22003395 | Msa0244040:intron | 20.0% |
| !! | AAATTACAAGTTCCATAAAA+AGG | - | chr2_2:22003401-22003420 | Msa0244040:intron | 20.0% |
| !! | TTATTTAAGAAAGAAAGTAG+CGG | - | chr2_2:22003541-22003560 | Msa0244040:intron | 20.0% |
| !! | TTTGCTAAAAATATATAGAG+TGG | - | chr2_2:22003831-22003850 | Msa0244040:intron | 20.0% |
| !! | ATAATTCTAAATTGGAAAAG+GGG | + | chr2_2:22003867-22003886 | None:intergenic | 20.0% |
| !! | CATAATTCTAAATTGGAAAA+GGG | + | chr2_2:22003868-22003887 | None:intergenic | 20.0% |
| !! | ACATAATTCTAAATTGGAAA+AGG | + | chr2_2:22003869-22003888 | None:intergenic | 20.0% |
| !! | TGCATAACATAATTCTAAAT+TGG | + | chr2_2:22003875-22003894 | None:intergenic | 20.0% |
| !!! | AATATGTCATTTCTAAAATC+AGG | - | chr2_2:22004131-22004150 | Msa0244040:intron | 20.0% |
| !! | GTTATTTGTATTCAAAATTG+AGG | + | chr2_2:22004317-22004336 | None:intergenic | 20.0% |
| !! | TTATAGAAAAGGTTGTTTAA+GGG | + | chr2_2:22004526-22004545 | None:intergenic | 20.0% |
| !! | ATTATAGAAAAGGTTGTTTA+AGG | + | chr2_2:22004527-22004546 | None:intergenic | 20.0% |
| !! | AACGATCTTTATTATAGAAA+AGG | + | chr2_2:22004537-22004556 | None:intergenic | 20.0% |
| !!! | AATTTTTATTAGGAACACTA+GGG | + | chr2_2:22005085-22005104 | None:intergenic | 20.0% |
| !!! | TAATTTTTATTAGGAACACT+AGG | + | chr2_2:22005086-22005105 | None:intergenic | 20.0% |
| !!! | ACTTATTAATTGATTTTCGT+TGG | + | chr2_2:22005239-22005258 | None:intergenic | 20.0% |
| !! | GAAAATGAAAATATGGAAAA+TGG | + | chr2_2:22005292-22005311 | None:intergenic | 20.0% |
| ! | ATGTATTCTCGAAAAATTGT+TGG | + | chr2_2:22000441-22000460 | None:intergenic | 25.0% |
| !!! | ACAATTTTTCGAGAATACAT+TGG | - | chr2_2:22000441-22000460 | Msa0244040:CDS | 25.0% |
| !! | GAAAATCATCTAAAGTTTCT+GGG | + | chr2_2:22000479-22000498 | None:intergenic | 25.0% |
| ! | GAAAGAACATAAGAATATGA+AGG | - | chr2_2:22000647-22000666 | Msa0244040:CDS | 25.0% |
| ! | ATGAAGGTTATGATAACTAT+CGG | - | chr2_2:22000663-22000682 | Msa0244040:CDS | 25.0% |
| ! | TAAATATCCATTCAATCCTA+AGG | - | chr2_2:22000698-22000717 | Msa0244040:CDS | 25.0% |
| ! | AGTTATTAAACATCTCAAGA+AGG | - | chr2_2:22000908-22000927 | Msa0244040:CDS | 25.0% |
| ! | TCTCTACAATCAACTAATAA+CGG | - | chr2_2:22001091-22001110 | Msa0244040:CDS | 25.0% |
| !!! | AATCAACTAATAACGGATTA+CGG | - | chr2_2:22001098-22001117 | Msa0244040:CDS | 25.0% |
| ! | CTAGTAATCAATTATTGGTA+AGG | + | chr2_2:22001322-22001341 | None:intergenic | 25.0% |
| ! | TGTAGCTAGTAATCAATTAT+TGG | + | chr2_2:22001327-22001346 | None:intergenic | 25.0% |
| ! | ATGACTCTATTTAGATATAC+AGG | - | chr2_2:22001613-22001632 | Msa0244040:intron | 25.0% |
| !!! | TGTTTTTTATATGATCTGAG+AGG | + | chr2_2:22002098-22002117 | None:intergenic | 25.0% |
| ! | ATATGTCCTATTCAAGAATT+TGG | + | chr2_2:22002210-22002229 | None:intergenic | 25.0% |
| ! | ATATGATTTAAATTTAGGCC+CGG | - | chr2_2:22002397-22002416 | Msa0244040:intron | 25.0% |
| ! | TAAATCTAAAAAAACCTACC+GGG | + | chr2_2:22002418-22002437 | None:intergenic | 25.0% |
| !! | AACTTTTTATGTTCACATCA+TGG | + | chr2_2:22002832-22002851 | None:intergenic | 25.0% |
| !! | GAGTCAATTATACCTTTTTA+TGG | + | chr2_2:22003416-22003435 | None:intergenic | 25.0% |
| !! | AATGCATTGATCATTTCTTT+AGG | + | chr2_2:22003472-22003491 | None:intergenic | 25.0% |
| ! | AATGATCAATGCATTTGAAA+AGG | - | chr2_2:22003477-22003496 | Msa0244040:intron | 25.0% |
| !!! | TTTTTTATTGGAAACGAACT+CGG | + | chr2_2:22003652-22003671 | None:intergenic | 25.0% |
| ! | TACTCATTATATTCACACTA+TGG | + | chr2_2:22003929-22003948 | None:intergenic | 25.0% |
| !!! | TTCAAAATTGAGGGTATTTT+TGG | + | chr2_2:22004307-22004326 | None:intergenic | 25.0% |
| ! | TCTATAATAAAGATCGTTGT+TGG | - | chr2_2:22004539-22004558 | Msa0244040:intron | 25.0% |
| ! | TAATAAAAAAAGCGGAAAGA+CGG | - | chr2_2:22004721-22004740 | Msa0244040:intron | 25.0% |
| ! | TTAAATCAAGTATTTGGTCA+TGG | + | chr2_2:22005003-22005022 | None:intergenic | 25.0% |
| !! | ATTTTTATTAGGAACACTAG+GGG | + | chr2_2:22005084-22005103 | None:intergenic | 25.0% |
| ! | CATTATTAAATTGAGTTTGC+AGG | - | chr2_2:22005158-22005177 | Msa0244040:intron | 25.0% |
| !!! | ATTAATTGATTTTCGTTGGT+GGG | + | chr2_2:22005235-22005254 | None:intergenic | 25.0% |
| !!! | TATTAATTGATTTTCGTTGG+TGG | + | chr2_2:22005236-22005255 | None:intergenic | 25.0% |
| ! | TGTGATCGAAAATGAAAATA+TGG | + | chr2_2:22005299-22005318 | None:intergenic | 25.0% |
| ! | ATGTATTCTCGAAAAATTGT+TGG | + | chr2_2:22000441-22000460 | None:intergenic | 25.0% |
| !!! | ACAATTTTTCGAGAATACAT+TGG | - | chr2_2:22000441-22000460 | Msa0244040:CDS | 25.0% |
| !! | TCATCATTGATGATATTAAC+AGG | + | chr2_2:22005421-22005440 | None:intergenic | 25.0% |
| ! | ATGAAGGTTATGATAACTAT+CGG | - | chr2_2:22000663-22000682 | Msa0244040:CDS | 25.0% |
| ! | TAAATATCCATTCAATCCTA+AGG | - | chr2_2:22000698-22000717 | Msa0244040:CDS | 25.0% |
| ! | AGTTATTAAACATCTCAAGA+AGG | - | chr2_2:22000908-22000927 | Msa0244040:CDS | 25.0% |
| ! | TCTCTACAATCAACTAATAA+CGG | - | chr2_2:22001091-22001110 | Msa0244040:CDS | 25.0% |
| !!! | AATCAACTAATAACGGATTA+CGG | - | chr2_2:22001098-22001117 | Msa0244040:CDS | 25.0% |
| ! | AAAAATTGTTGGCCTCAAAA+CGG | + | chr2_2:22000430-22000449 | None:intergenic | 30.0% |
| ! | GGAAAATCATCTAAAGTTTC+TGG | + | chr2_2:22000480-22000499 | None:intergenic | 30.0% |
| ! | TCATCATTGATGATATCAAC+AGG | + | chr2_2:22000501-22000520 | None:intergenic | 30.0% |
| AATCAATTCCACTTCATTCT+AGG | - | chr2_2:22000525-22000544 | Msa0244040:CDS | 30.0% | |
| GTATAAAGATGGAAAAGGAA+CGG | - | chr2_2:22000563-22000582 | Msa0244040:CDS | 30.0% | |
| TATAAAGATGGAAAAGGAAC+GGG | - | chr2_2:22000564-22000583 | Msa0244040:CDS | 30.0% | |
| !!! | TGTGTTTGAACACTTTTTCT+GGG | + | chr2_2:22000626-22000645 | None:intergenic | 30.0% |
| !!! | TTGTGTTTGAACACTTTTTC+TGG | + | chr2_2:22000627-22000646 | None:intergenic | 30.0% |
| ! | TTTTTCTCCTTAGGATTGAA+TGG | + | chr2_2:22000708-22000727 | None:intergenic | 30.0% |
| ATTCAATCCTAAGGAGAAAA+AGG | - | chr2_2:22000707-22000726 | Msa0244040:CDS | 30.0% | |
| !! | CATAGTTGATATCCATTTTG+TGG | + | chr2_2:22001019-22001038 | None:intergenic | 30.0% |
| CAATCAAACTATATCCTCAA+AGG | - | chr2_2:22001055-22001074 | Msa0244040:CDS | 30.0% | |
| AAAATCACACACATGATCAT+GGG | + | chr2_2:22001440-22001459 | None:intergenic | 30.0% | |
| TAAAATCACACACATGATCA+TGG | + | chr2_2:22001441-22001460 | None:intergenic | 30.0% | |
| ! | TTTTATATGATCTGAGAGGT+AGG | + | chr2_2:22002094-22002113 | None:intergenic | 30.0% |
| !!! | AAACTAGGGTTTTTTGTTCT+TGG | + | chr2_2:22002135-22002154 | None:intergenic | 30.0% |
| !!! | ACAAAAAACCCTAGTTTTGA+AGG | - | chr2_2:22002138-22002157 | Msa0244040:intron | 30.0% |
| !! | TGATATTTTTGATCTCCTGA+TGG | + | chr2_2:22002169-22002188 | None:intergenic | 30.0% |
| ! | TATTCAAGAATTTGGTAGCA+TGG | + | chr2_2:22002202-22002221 | None:intergenic | 30.0% |
| ATGCTACCAAATTCTTGAAT+AGG | - | chr2_2:22002201-22002220 | Msa0244040:intron | 30.0% | |
| TAGGGGAATTAATCATTTGA+AGG | - | chr2_2:22002247-22002266 | Msa0244040:intron | 30.0% | |
| !!! | ATTTTTTTTTTAGGCCTGGT+AGG | - | chr2_2:22002359-22002378 | Msa0244040:intron | 30.0% |
| TGTTCACATTATGGTTGTTA+GGG | + | chr2_2:22002915-22002934 | None:intergenic | 30.0% | |
| ATGTTCACATTATGGTTGTT+AGG | + | chr2_2:22002916-22002935 | None:intergenic | 30.0% | |
| ! | ATTCAGTTTTCTCTAGTTGT+GGG | - | chr2_2:22003033-22003052 | Msa0244040:intron | 30.0% |
| TTCTACTTTATCTTCAGTTG+TGG | - | chr2_2:22003187-22003206 | Msa0244040:intron | 30.0% | |
| GAAAGAGATACAAAAAGTTG+GGG | + | chr2_2:22003323-22003342 | None:intergenic | 30.0% | |
| CGAAAGAGATACAAAAAGTT+GGG | + | chr2_2:22003324-22003343 | None:intergenic | 30.0% | |
| ACGAAAGAGATACAAAAAGT+TGG | + | chr2_2:22003325-22003344 | None:intergenic | 30.0% | |
| TACCAAACAATTCATCACAA+GGG | + | chr2_2:22003625-22003644 | None:intergenic | 30.0% | |
| ! | AATCTACGAAATCTAGAGTT+CGG | + | chr2_2:22003707-22003726 | None:intergenic | 30.0% |
| TCATTTCCCCATATAATTGA+AGG | - | chr2_2:22003726-22003745 | Msa0244040:intron | 30.0% | |
| CATTTCCCCATATAATTGAA+GGG | - | chr2_2:22003727-22003746 | Msa0244040:intron | 30.0% | |
| TGTTGACCCTTCAATTATAT+GGG | + | chr2_2:22003736-22003755 | None:intergenic | 30.0% | |
| GTTAGGGGAATTAGATATTA+TGG | + | chr2_2:22003904-22003923 | None:intergenic | 30.0% | |
| TATTCACACTATGGTTGTTA+GGG | + | chr2_2:22003920-22003939 | None:intergenic | 30.0% | |
| ATATTCACACTATGGTTGTT+AGG | + | chr2_2:22003921-22003940 | None:intergenic | 30.0% | |
| ACAACCCCTTTCAAAAAATT+TGG | - | chr2_2:22004266-22004285 | Msa0244040:intron | 30.0% | |
| CAACCCCTTTCAAAAAATTT+GGG | - | chr2_2:22004267-22004286 | Msa0244040:intron | 30.0% | |
| !!! | TCAGCCCAAATTTTTTGAAA+GGG | + | chr2_2:22004274-22004293 | None:intergenic | 30.0% |
| ! | GTTGTTTAAGGGTATAATTG+GGG | + | chr2_2:22004515-22004534 | None:intergenic | 30.0% |
| ! | GGTTGTTTAAGGGTATAATT+GGG | + | chr2_2:22004516-22004535 | None:intergenic | 30.0% |
| ! | AGGTTGTTTAAGGGTATAAT+TGG | + | chr2_2:22004517-22004536 | None:intergenic | 30.0% |
| CGTTAGCGTAATAAAAAAAG+CGG | - | chr2_2:22004713-22004732 | Msa0244040:intron | 30.0% | |
| ATAAATACTAGCGAAAAGAC+AGG | + | chr2_2:22004749-22004768 | None:intergenic | 30.0% | |
| TGTCTTTGTATGCCTATTAT+TGG | + | chr2_2:22005060-22005079 | None:intergenic | 30.0% | |
| ! | AAAAATTGTTGGCCTCAAAA+CGG | + | chr2_2:22000430-22000449 | None:intergenic | 30.0% |
| AATCAATTCCACTTCATTCT+AGG | - | chr2_2:22000525-22000544 | Msa0244040:CDS | 30.0% | |
| GTATAAAGATGGAAAAGGAA+CGG | - | chr2_2:22000563-22000582 | Msa0244040:CDS | 30.0% | |
| TATAAAGATGGAAAAGGAAC+GGG | - | chr2_2:22000564-22000583 | Msa0244040:CDS | 30.0% | |
| !!! | TGTGTTTGAACACTTTTTCT+GGG | + | chr2_2:22000626-22000645 | None:intergenic | 30.0% |
| !!! | TTGTGTTTGAACACTTTTTC+TGG | + | chr2_2:22000627-22000646 | None:intergenic | 30.0% |
| GAAAGAACACAAGAATATGA+AGG | - | chr2_2:22005567-22005586 | Msa0244040:CDS | 30.0% | |
| ! | TTTTTCTCCTTAGGATTGAA+TGG | + | chr2_2:22000708-22000727 | None:intergenic | 30.0% |
| ATTCAATCCTAAGGAGAAAA+AGG | - | chr2_2:22000707-22000726 | Msa0244040:CDS | 30.0% | |
| !! | CATAGTTGATATCCATTTTG+TGG | + | chr2_2:22001019-22001038 | None:intergenic | 30.0% |
| CAATCAAACTATATCCTCAA+AGG | - | chr2_2:22001055-22001074 | Msa0244040:CDS | 30.0% | |
| !!! | ACAATATCAATGCCGTTTTG+AGG | - | chr2_2:22000415-22000434 | Msa0244040:CDS | 35.0% |
| GAGGTGTATAAAGATGGAAA+AGG | - | chr2_2:22000558-22000577 | Msa0244040:CDS | 35.0% | |
| AAGGTTATGATAACTATCGG+AGG | - | chr2_2:22000666-22000685 | Msa0244040:CDS | 35.0% | |
| TGAATGGATATTTAGTGCCA+TGG | + | chr2_2:22000692-22000711 | None:intergenic | 35.0% | |
| ATCCTAAGGAGAAAAAGGTA+TGG | - | chr2_2:22000712-22000731 | Msa0244040:CDS | 35.0% | |
| ! | ATCCATACCTTTTTCTCCTT+AGG | + | chr2_2:22000717-22000736 | None:intergenic | 35.0% |
| TACCTTGTCAATGATGATTC+TGG | - | chr2_2:22000786-22000805 | Msa0244040:CDS | 35.0% | |
| TACCAGAATCATCATTGACA+AGG | + | chr2_2:22000791-22000810 | None:intergenic | 35.0% | |
| !! | TATATCGATTCTAGTGTGAC+TGG | - | chr2_2:22000858-22000877 | Msa0244040:CDS | 35.0% |
| !! | ATATCGATTCTAGTGTGACT+GGG | - | chr2_2:22000859-22000878 | Msa0244040:CDS | 35.0% |
| ! | AATAACTTGTCCAATGCAGT+TGG | + | chr2_2:22000895-22000914 | None:intergenic | 35.0% |
| TAAGCATGTATCCAAATCCA+TGG | - | chr2_2:22000932-22000951 | Msa0244040:CDS | 35.0% | |
| CCAAAACAATTTGTGGTAGT+GGG | + | chr2_2:22000994-22001013 | None:intergenic | 35.0% | |
| ! | CCACTACCACAAATTGTTTT+GGG | - | chr2_2:22000992-22001011 | Msa0244040:CDS | 35.0% |
| !!! | ATTGTTTTGGGACCACAAAA+TGG | - | chr2_2:22001004-22001023 | Msa0244040:CDS | 35.0% |
| ATCATCAAACTCATCCTTTG+AGG | + | chr2_2:22001072-22001091 | None:intergenic | 35.0% | |
| ! | TTACGGTGAGCTTAAACTTT+TGG | - | chr2_2:22001115-22001134 | Msa0244040:CDS | 35.0% |
| !! | TTGCGATTTTAAGTGCGATT+AGG | - | chr2_2:22001936-22001955 | Msa0244040:intron | 35.0% |
| !! | TGCGATTTTAAGTGCGATTA+GGG | - | chr2_2:22001937-22001956 | Msa0244040:intron | 35.0% |
| AGCTAAGAAGAAAGTTAAGG+TGG | + | chr2_2:22001976-22001995 | None:intergenic | 35.0% | |
| CCTAGCTAAGAAGAAAGTTA+AGG | + | chr2_2:22001979-22001998 | None:intergenic | 35.0% | |
| CCTTAACTTTCTTCTTAGCT+AGG | - | chr2_2:22001976-22001995 | Msa0244040:intron | 35.0% | |
| ! | ATTTTTGATCTCCTGATGGA+TGG | + | chr2_2:22002165-22002184 | None:intergenic | 35.0% |
| TAGGACATATGTTCACATGA+TGG | - | chr2_2:22002220-22002239 | Msa0244040:intron | 35.0% | |
| ATGTTCACATGATGGTTGTT+AGG | - | chr2_2:22002228-22002247 | Msa0244040:intron | 35.0% | |
| TGTTCACATGATGGTTGTTA+GGG | - | chr2_2:22002229-22002248 | Msa0244040:intron | 35.0% | |
| !! | AGAGGTATTTAAAACCTACC+AGG | + | chr2_2:22002376-22002395 | None:intergenic | 35.0% |
| GATATTGTGAGCTTCAATGA+CGG | + | chr2_2:22002567-22002586 | None:intergenic | 35.0% | |
| !! | GTTGTGATGATGGTTTAAAG+TGG | - | chr2_2:22002707-22002726 | Msa0244040:intron | 35.0% |
| !! | ATAATAAAGCCAAGAGCACT+TGG | - | chr2_2:22002770-22002789 | Msa0244040:intron | 35.0% |
| ! | GATTCAGTTTTCTCTAGTTG+TGG | - | chr2_2:22003032-22003051 | Msa0244040:intron | 35.0% |
| AGGATACAACAAGAATGGAA+CGG | + | chr2_2:22003138-22003157 | None:intergenic | 35.0% | |
| ! | TCCATTCTTGTTGTATCCTT+TGG | - | chr2_2:22003139-22003158 | Msa0244040:intron | 35.0% |
| ! | CCATTCTTGTTGTATCCTTT+GGG | - | chr2_2:22003140-22003159 | Msa0244040:intron | 35.0% |
| ACCAAACAATTCATCACAAG+GGG | + | chr2_2:22003624-22003643 | None:intergenic | 35.0% | |
| GTACCAAACAATTCATCACA+AGG | + | chr2_2:22003626-22003645 | None:intergenic | 35.0% | |
| GTTGACCCTTCAATTATATG+GGG | + | chr2_2:22003735-22003754 | None:intergenic | 35.0% | |
| ! | GTGTTGACCCTTCAATTATA+TGG | + | chr2_2:22003737-22003756 | None:intergenic | 35.0% |
| ATTCACACTATGGTTGTTAG+GGG | + | chr2_2:22003919-22003938 | None:intergenic | 35.0% | |
| !!! | CAGCCCAAATTTTTTGAAAG+GGG | + | chr2_2:22004273-22004292 | None:intergenic | 35.0% |
| !!! | GTCAGCCCAAATTTTTTGAA+AGG | + | chr2_2:22004275-22004294 | None:intergenic | 35.0% |
| TAAATCTCACATACGAGTAG+AGG | + | chr2_2:22004861-22004880 | None:intergenic | 35.0% | |
| ACTCGTATGTGAGATTTAAG+TGG | - | chr2_2:22004863-22004882 | Msa0244040:intron | 35.0% | |
| GAGTTTGCAGGCTTATAAAA+AGG | - | chr2_2:22005170-22005189 | Msa0244040:intron | 35.0% | |
| ! | AAAAAGGCATACCAAGAGTT+TGG | - | chr2_2:22005186-22005205 | Msa0244040:intron | 35.0% |
| !!! | ACAATATCAATGCCGTTTTG+AGG | - | chr2_2:22000415-22000434 | Msa0244040:CDS | 35.0% |
| GAGGTGTATAAAGATGGAAA+AGG | - | chr2_2:22000558-22000577 | Msa0244040:CDS | 35.0% | |
| AAGGTTATGATAACTATCGG+AGG | - | chr2_2:22000666-22000685 | Msa0244040:CDS | 35.0% | |
| TGAATGGATATTTAGTGCCA+TGG | + | chr2_2:22000692-22000711 | None:intergenic | 35.0% | |
| ATCCTAAGGAGAAAAAGGTA+TGG | - | chr2_2:22000712-22000731 | Msa0244040:CDS | 35.0% | |
| ! | ATCCATACCTTTTTCTCCTT+AGG | + | chr2_2:22000717-22000736 | None:intergenic | 35.0% |
| TACCTTGTCAATGATGATTC+TGG | - | chr2_2:22000786-22000805 | Msa0244040:CDS | 35.0% | |
| TACCAGAATCATCATTGACA+AGG | + | chr2_2:22000791-22000810 | None:intergenic | 35.0% | |
| !! | TATATCGATTCTAGTGTGAC+TGG | - | chr2_2:22000858-22000877 | Msa0244040:CDS | 35.0% |
| !! | ATATCGATTCTAGTGTGACT+GGG | - | chr2_2:22000859-22000878 | Msa0244040:CDS | 35.0% |
| ! | AATAACTTGTCCAATGCAGT+TGG | + | chr2_2:22000895-22000914 | None:intergenic | 35.0% |
| TAAGCATGTATCCAAATCCA+TGG | - | chr2_2:22000932-22000951 | Msa0244040:CDS | 35.0% | |
| CCAAAACAATTTGTGGTAGT+GGG | + | chr2_2:22000994-22001013 | None:intergenic | 35.0% | |
| ! | CCACTACCACAAATTGTTTT+GGG | - | chr2_2:22000992-22001011 | Msa0244040:CDS | 35.0% |
| !!! | ATTGTTTTGGGACCACAAAA+TGG | - | chr2_2:22001004-22001023 | Msa0244040:CDS | 35.0% |
| ATCATCAAACTCATCCTTTG+AGG | + | chr2_2:22001072-22001091 | None:intergenic | 35.0% | |
| ! | TTACGGTGAGCTTAAACTTT+TGG | - | chr2_2:22001115-22001134 | Msa0244040:CDS | 35.0% |
| TCCATCTTTATACACCTCAG+TGG | + | chr2_2:22000556-22000575 | None:intergenic | 40.0% | |
| GATATGTCTGATCGAGCTTA+TGG | + | chr2_2:22000748-22000767 | None:intergenic | 40.0% | |
| CATCAATTATGCTAGTGCAG+TGG | + | chr2_2:22000818-22000837 | None:intergenic | 40.0% | |
| CACTGCACTAGCATAATTGA+TGG | - | chr2_2:22000816-22000835 | Msa0244040:CDS | 40.0% | |
| !! | TATCGATTCTAGTGTGACTG+GGG | - | chr2_2:22000860-22000879 | Msa0244040:CDS | 40.0% |
| GGACACATATTCCATGGATT+TGG | + | chr2_2:22000946-22000965 | None:intergenic | 40.0% | |
| AGCAATGGACACATATTCCA+TGG | + | chr2_2:22000952-22000971 | None:intergenic | 40.0% | |
| ! | CCCACTACCACAAATTGTTT+TGG | - | chr2_2:22000991-22001010 | Msa0244040:CDS | 40.0% |
| CCCAAAACAATTTGTGGTAG+TGG | + | chr2_2:22000995-22001014 | None:intergenic | 40.0% | |
| TGTGGTCCCAAAACAATTTG+TGG | + | chr2_2:22001001-22001020 | None:intergenic | 40.0% | |
| CATCTTAGTATCAGCTGGAT+CGG | + | chr2_2:22001153-22001172 | None:intergenic | 40.0% | |
| TGATACTAAGATGAACCGAG+AGG | - | chr2_2:22001160-22001179 | Msa0244040:CDS | 40.0% | |
| ATCAACAGCAAATCACTCCT+TGG | - | chr2_2:22001209-22001228 | Msa0244040:CDS | 40.0% | |
| ! | CACTCCTTGGACTTTTTGTT+TGG | - | chr2_2:22001222-22001241 | Msa0244040:CDS | 40.0% |
| CACTCCAAACAAAAAGTCCA+AGG | + | chr2_2:22001229-22001248 | None:intergenic | 40.0% | |
| AGCATTTCCTCCAAGATGTA+AGG | + | chr2_2:22001290-22001309 | None:intergenic | 40.0% | |
| ! | CACTAAGGTTTTCGGAGAAT+AGG | + | chr2_2:22001692-22001711 | None:intergenic | 40.0% |
| TCATTATAGGAATTAGGGGC+TGG | + | chr2_2:22001791-22001810 | None:intergenic | 40.0% | |
| ATCGCACTTAAAATCGCAAG+AGG | + | chr2_2:22001935-22001954 | None:intergenic | 40.0% | |
| ! | AGGTAGGTAAGTTTTCAGTG+AGG | + | chr2_2:22002078-22002097 | None:intergenic | 40.0% |
| ! | TTTTGTTCTTGGCGCAGTTT+TGG | + | chr2_2:22002124-22002143 | None:intergenic | 40.0% |
| TGGATGGACCTTCAAAACTA+GGG | + | chr2_2:22002149-22002168 | None:intergenic | 40.0% | |
| ATGGATGGACCTTCAAAACT+AGG | + | chr2_2:22002150-22002169 | None:intergenic | 40.0% | |
| ! | TCAAGAATTTGGTAGCATGG+TGG | + | chr2_2:22002199-22002218 | None:intergenic | 40.0% |
| GTTCACATGATGGTTGTTAG+GGG | - | chr2_2:22002230-22002249 | Msa0244040:intron | 40.0% | |
| GATTTAAATTTAGGCCCGGT+AGG | - | chr2_2:22002401-22002420 | Msa0244040:intron | 40.0% | |
| TATATTTGTCGAGCACGTTG+AGG | + | chr2_2:22002498-22002517 | None:intergenic | 40.0% | |
| !! | GCTCTTGGCTTTATTATCAC+CGG | + | chr2_2:22002767-22002786 | None:intergenic | 40.0% |
| GTTCACATCATGGTTGTTTG+AGG | + | chr2_2:22002822-22002841 | None:intergenic | 40.0% | |
| CCCAAAGGATACAACAAGAA+TGG | + | chr2_2:22003143-22003162 | None:intergenic | 40.0% | |
| ! | TTCAGTTGTGGTAACTTGTC+TGG | - | chr2_2:22003199-22003218 | Msa0244040:intron | 40.0% |
| TCCCCTTGTGATGAATTGTT+TGG | - | chr2_2:22003620-22003639 | Msa0244040:intron | 40.0% | |
| GTGTTGGAATTCCAAACTCT+TGG | + | chr2_2:22005200-22005219 | None:intergenic | 40.0% | |
| !! | TGGGTTTGATTGGTTTGTGT+TGG | + | chr2_2:22005216-22005235 | None:intergenic | 40.0% |
| !!! | TTTTCGTTGGTGGGTTTGAT+TGG | + | chr2_2:22005226-22005245 | None:intergenic | 40.0% |
| TCCATCTTTATACACCTCAG+TGG | + | chr2_2:22000556-22000575 | None:intergenic | 40.0% | |
| GATATGTCTGATCGAGCTTA+TGG | + | chr2_2:22000748-22000767 | None:intergenic | 40.0% | |
| CATCAATTATGCTAGTGCAG+TGG | + | chr2_2:22000818-22000837 | None:intergenic | 40.0% | |
| CACTGCACTAGCATAATTGA+TGG | - | chr2_2:22000816-22000835 | Msa0244040:CDS | 40.0% | |
| !! | TATCGATTCTAGTGTGACTG+GGG | - | chr2_2:22000860-22000879 | Msa0244040:CDS | 40.0% |
| GGACACATATTCCATGGATT+TGG | + | chr2_2:22000946-22000965 | None:intergenic | 40.0% | |
| AGCAATGGACACATATTCCA+TGG | + | chr2_2:22000952-22000971 | None:intergenic | 40.0% | |
| ! | CCCACTACCACAAATTGTTT+TGG | - | chr2_2:22000991-22001010 | Msa0244040:CDS | 40.0% |
| CCCAAAACAATTTGTGGTAG+TGG | + | chr2_2:22000995-22001014 | None:intergenic | 40.0% | |
| TGTGGTCCCAAAACAATTTG+TGG | + | chr2_2:22001001-22001020 | None:intergenic | 40.0% | |
| CATCTTAGTATCAGCTGGAT+CGG | + | chr2_2:22001153-22001172 | None:intergenic | 40.0% | |
| TGATACTAAGATGAACCGAG+AGG | - | chr2_2:22001160-22001179 | Msa0244040:CDS | 40.0% | |
| ATCAACAGCAAATCACTCCT+TGG | - | chr2_2:22001209-22001228 | Msa0244040:CDS | 40.0% | |
| ! | CACTCCTTGGACTTTTTGTT+TGG | - | chr2_2:22001222-22001241 | Msa0244040:CDS | 40.0% |
| CACTCCAAACAAAAAGTCCA+AGG | + | chr2_2:22001229-22001248 | None:intergenic | 40.0% | |
| AGCATTTCCTCCAAGATGTA+AGG | + | chr2_2:22001290-22001309 | None:intergenic | 40.0% | |
| TCGAGAATACATTGGCGTGA+AGG | - | chr2_2:22000449-22000468 | Msa0244040:CDS | 45.0% | |
| GCCACTGAGGTGTATAAAGA+TGG | - | chr2_2:22000552-22000571 | Msa0244040:CDS | 45.0% | |
| ATGATAACTATCGGAGGCCA+TGG | - | chr2_2:22000672-22000691 | Msa0244040:CDS | 45.0% | |
| !! | ACAATTTGTGGTAGTGGGCT+TGG | + | chr2_2:22000989-22001008 | None:intergenic | 45.0% |
| ! | GGTGAGCTTAAACTTTTGGC+AGG | - | chr2_2:22001119-22001138 | Msa0244040:CDS | 45.0% |
| CGGTTCATCTTAGTATCAGC+TGG | + | chr2_2:22001158-22001177 | None:intergenic | 45.0% | |
| !! | AACCGAGAGGTGTTCATTGA+GGG | - | chr2_2:22001173-22001192 | Msa0244040:CDS | 45.0% |
| TAAGGCTCGATGTCATTGCT+CGG | + | chr2_2:22001272-22001291 | None:intergenic | 45.0% | |
| TGACATCGAGCCTTACATCT+TGG | - | chr2_2:22001277-22001296 | Msa0244040:intron | 45.0% | |
| CGGAGAATAGGTGAACTAAG+AGG | + | chr2_2:22001680-22001699 | None:intergenic | 45.0% | |
| ! | GGAAACATTGGTGGTAGGTT+AGG | + | chr2_2:22002005-22002024 | None:intergenic | 45.0% |
| GCATGATGATCAGCGAAGAA+CGG | + | chr2_2:22002030-22002049 | None:intergenic | 45.0% | |
| CAATGCTAACGTATGAGGAC+TGG | + | chr2_2:22002055-22002074 | None:intergenic | 45.0% | |
| TGAGGCAATGCTAACGTATG+AGG | + | chr2_2:22002060-22002079 | None:intergenic | 45.0% | |
| !!! | GTTTTGAAGGTCCATCCATC+AGG | - | chr2_2:22002151-22002170 | Msa0244040:intron | 45.0% |
| AAGTGGTGTTTCCTAGAGCT+AGG | - | chr2_2:22002724-22002743 | Msa0244040:intron | 45.0% | |
| AGTGGTGTTTCCTAGAGCTA+GGG | - | chr2_2:22002725-22002744 | Msa0244040:intron | 45.0% | |
| GGGGCTGATGACTTAAAATC+CGG | - | chr2_2:22002745-22002764 | Msa0244040:intron | 45.0% | |
| CAATCTCATCCAAGTGCTCT+TGG | + | chr2_2:22002782-22002801 | None:intergenic | 45.0% | |
| ! | CTAGTTGTGGGTCGTGATTT+TGG | - | chr2_2:22003045-22003064 | Msa0244040:intron | 45.0% |
| ATATGCCGATCTTTCCGCAA+CGG | - | chr2_2:22003086-22003105 | Msa0244040:intron | 45.0% | |
| ! | TCTTGTTGTATCCTTTGGGC+CGG | - | chr2_2:22003144-22003163 | Msa0244040:intron | 45.0% |
| CAAAACCAACCCAAACTCTC+CGG | + | chr2_2:22003166-22003185 | None:intergenic | 45.0% | |
| CACGATATACTCCGTTTGAG+TGG | - | chr2_2:22003276-22003295 | Msa0244040:intron | 45.0% | |
| ! | AAATCTAGAGTTCGGCTGCA+AGG | + | chr2_2:22003699-22003718 | None:intergenic | 45.0% |
| ACATACGAGTAGAGGAGATG+AGG | + | chr2_2:22004853-22004872 | None:intergenic | 45.0% | |
| TCGAGAATACATTGGCGTGA+AGG | - | chr2_2:22000449-22000468 | Msa0244040:CDS | 45.0% | |
| GCCACTGAGGTGTATAAAGA+TGG | - | chr2_2:22000552-22000571 | Msa0244040:CDS | 45.0% | |
| ATGATAACTATCGGAGGCCA+TGG | - | chr2_2:22000672-22000691 | Msa0244040:CDS | 45.0% | |
| !! | ACAATTTGTGGTAGTGGGCT+TGG | + | chr2_2:22000989-22001008 | None:intergenic | 45.0% |
| ! | GGTGAGCTTAAACTTTTGGC+AGG | - | chr2_2:22001119-22001138 | Msa0244040:CDS | 45.0% |
| CGGTTCATCTTAGTATCAGC+TGG | + | chr2_2:22001158-22001177 | None:intergenic | 45.0% | |
| !! | AACCGAGAGGTGTTCATTGA+GGG | - | chr2_2:22001173-22001192 | Msa0244040:CDS | 45.0% |
| TAAGGCTCGATGTCATTGCT+CGG | + | chr2_2:22001272-22001291 | None:intergenic | 45.0% | |
| TGACATCGAGCCTTACATCT+TGG | - | chr2_2:22001277-22001296 | Msa0244040:intron | 45.0% | |
| !!! | TATCTAATAATTTTTTTTTT+AGG | - | chr2_2:22002350-22002369 | Msa0244040:intron | 5.0% |
| !!! | TCTTTTTTTTAATTTTTATT+AGG | + | chr2_2:22005095-22005114 | None:intergenic | 5.0% |
| TGGCGAAGCCTAGAATGAAG+TGG | + | chr2_2:22000536-22000555 | None:intergenic | 50.0% | |
| ! | GCTGACTTCTCCAACTGCAT+TGG | - | chr2_2:22000882-22000901 | Msa0244040:CDS | 50.0% |
| !! | ATTTGTGGTAGTGGGCTTGG+AGG | + | chr2_2:22000986-22001005 | None:intergenic | 50.0% |
| !! | GAACCGAGAGGTGTTCATTG+AGG | - | chr2_2:22001172-22001191 | Msa0244040:CDS | 50.0% |
| CATCGAGCCTTACATCTTGG+AGG | - | chr2_2:22001280-22001299 | Msa0244040:intron | 50.0% | |
| CTGCATGTGTGTGTTGTGCT+TGG | - | chr2_2:22001471-22001490 | Msa0244040:intron | 50.0% | |
| AGAACGGTGGGAAACATTGG+TGG | + | chr2_2:22002014-22002033 | None:intergenic | 50.0% | |
| CGAAGAACGGTGGGAAACAT+TGG | + | chr2_2:22002017-22002036 | None:intergenic | 50.0% | |
| GATGATCAGCGAAGAACGGT+GGG | + | chr2_2:22002026-22002045 | None:intergenic | 50.0% | |
| TGATGATCAGCGAAGAACGG+TGG | + | chr2_2:22002027-22002046 | None:intergenic | 50.0% | |
| GTGGTGTTTCCTAGAGCTAG+GGG | - | chr2_2:22002726-22002745 | Msa0244040:intron | 50.0% | |
| AACCACCGTTGCGGAAAGAT+CGG | + | chr2_2:22003094-22003113 | None:intergenic | 50.0% | |
| ACTCCGTTTGAGTGGTACCA+TGG | - | chr2_2:22003284-22003303 | Msa0244040:intron | 50.0% | |
| CTCCGTTTGAGTGGTACCAT+GGG | - | chr2_2:22003285-22003304 | Msa0244040:intron | 50.0% | |
| GACCCATGGTACCACTCAAA+CGG | + | chr2_2:22003290-22003309 | None:intergenic | 50.0% | |
| GTTTGAGTGGTACCATGGGT+CGG | - | chr2_2:22003289-22003308 | Msa0244040:intron | 50.0% | |
| TTCGCGAGCTATCAGCTCAA+AGG | + | chr2_2:22004107-22004126 | None:intergenic | 50.0% | |
| TGAGCTGATAGCTCGCGAAT+AGG | - | chr2_2:22004108-22004127 | Msa0244040:intron | 50.0% | |
| TGGCGAAGCCTAGAATGAAG+TGG | + | chr2_2:22000536-22000555 | None:intergenic | 50.0% | |
| ! | GCTGACTTCTCCAACTGCAT+TGG | - | chr2_2:22000882-22000901 | Msa0244040:CDS | 50.0% |
| !! | ATTTGTGGTAGTGGGCTTGG+AGG | + | chr2_2:22000986-22001005 | None:intergenic | 50.0% |
| !! | GAACCGAGAGGTGTTCATTG+AGG | - | chr2_2:22001172-22001191 | Msa0244040:CDS | 50.0% |
| CATCGAGCCTTACATCTTGG+AGG | - | chr2_2:22001280-22001299 | Msa0244040:intron | 50.0% | |
| CATTCTAGGCTTCGCCACTG+AGG | - | chr2_2:22000539-22000558 | Msa0244040:CDS | 55.0% | |
| CGGGACATTTCGTTCGCGAT+TGG | - | chr2_2:22000583-22000602 | Msa0244040:CDS | 55.0% | |
| CGCCCTCAATGAACACCTCT+CGG | + | chr2_2:22001178-22001197 | None:intergenic | 55.0% | |
| ! | GATGTCATTGCTCGGTGGGT+TGG | + | chr2_2:22001264-22001283 | None:intergenic | 55.0% |
| GCTCGATGTCATTGCTCGGT+GGG | + | chr2_2:22001268-22001287 | None:intergenic | 55.0% | |
| ! | CGGTGGGAAACATTGGTGGT+AGG | + | chr2_2:22002010-22002029 | None:intergenic | 55.0% |
| ! | AGTCATCAGCCCCTAGCTCT+AGG | + | chr2_2:22002738-22002757 | None:intergenic | 55.0% |
| ATCCTTTGGGCCGGAGAGTT+TGG | - | chr2_2:22003153-22003172 | Msa0244040:intron | 55.0% | |
| TCCTTTGGGCCGGAGAGTTT+GGG | - | chr2_2:22003154-22003173 | Msa0244040:intron | 55.0% | |
| ! | TCTGGCTTCGTGTGTGTTCG+TGG | - | chr2_2:22003217-22003236 | Msa0244040:intron | 55.0% |
| ! | GGGGTATTAGATCCGACCCA+TGG | + | chr2_2:22003304-22003323 | None:intergenic | 55.0% |
| CATTCTAGGCTTCGCCACTG+AGG | - | chr2_2:22000539-22000558 | Msa0244040:CDS | 55.0% | |
| CGGGACATTTCGTTCGCGAT+TGG | - | chr2_2:22000583-22000602 | Msa0244040:CDS | 55.0% | |
| CGCCCTCAATGAACACCTCT+CGG | + | chr2_2:22001178-22001197 | None:intergenic | 55.0% | |
| ! | GATGTCATTGCTCGGTGGGT+TGG | + | chr2_2:22001264-22001283 | None:intergenic | 55.0% |
| GCTCGATGTCATTGCTCGGT+GGG | + | chr2_2:22001268-22001287 | None:intergenic | 55.0% | |
| GAGGAGCTCTGTCGGAGCAA+TGG | + | chr2_2:22000967-22000986 | None:intergenic | 60.0% | |
| TGGGCTTGGAGGAGCTCTGT+CGG | + | chr2_2:22000975-22000994 | None:intergenic | 60.0% | |
| GGCTCGATGTCATTGCTCGG+TGG | + | chr2_2:22001269-22001288 | None:intergenic | 60.0% | |
| TGCCGATCTTTCCGCAACGG+TGG | - | chr2_2:22003089-22003108 | Msa0244040:intron | 60.0% | |
| ACGAAGCGCAACCACCGTTG+CGG | + | chr2_2:22003103-22003122 | None:intergenic | 60.0% | |
| ACCCAAACTCTCCGGCCCAA+AGG | + | chr2_2:22003158-22003177 | None:intergenic | 60.0% | |
| TTGGGCCGGAGAGTTTGGGT+TGG | - | chr2_2:22003158-22003177 | Msa0244040:intron | 60.0% | |
| GAGGAGCTCTGTCGGAGCAA+TGG | + | chr2_2:22000967-22000986 | None:intergenic | 60.0% | |
| TGGGCTTGGAGGAGCTCTGT+CGG | + | chr2_2:22000975-22000994 | None:intergenic | 60.0% | |
| GGCTCGATGTCATTGCTCGG+TGG | + | chr2_2:22001269-22001288 | None:intergenic | 60.0% | |
| GCAACGGTGGTTGCGCTTCG+TGG | - | chr2_2:22003102-22003121 | Msa0244040:intron | 65.0% | |
| GGTTGCGCTTCGTGGTCTGC+AGG | - | chr2_2:22003110-22003129 | Msa0244040:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 22000399 | 22006254 | 22000399 | ID=Msa0244040;Name=Msa0244040 |
| chr2_2 | mRNA | 22000399 | 22006254 | 22000399 | ID=Msa0244040-mRNA-1;Parent=Msa0244040;Name=Msa0244040-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|0|0|1|0|0|5|0|542 |
| chr2_2 | exon | 22006021 | 22006254 | 22006021 | ID=Msa0244040-mRNA-1:exon:8569;Parent=Msa0244040-mRNA-1 |
| chr2_2 | exon | 22005745 | 22005984 | 22005745 | ID=Msa0244040-mRNA-1:exon:8568;Parent=Msa0244040-mRNA-1 |
| chr2_2 | exon | 22005534 | 22005726 | 22005534 | ID=Msa0244040-mRNA-1:exon:8567;Parent=Msa0244040-mRNA-1 |
| chr2_2 | exon | 22005415 | 22005512 | 22005415 | ID=Msa0244040-mRNA-1:exon:8566;Parent=Msa0244040-mRNA-1 |
| chr2_2 | exon | 22000399 | 22001262 | 22000399 | ID=Msa0244040-mRNA-1:exon:8565;Parent=Msa0244040-mRNA-1 |
| chr2_2 | CDS | 22006021 | 22006254 | 22006021 | ID=Msa0244040-mRNA-1:cds;Parent=Msa0244040-mRNA-1 |
| chr2_2 | CDS | 22005745 | 22005984 | 22005745 | ID=Msa0244040-mRNA-1:cds;Parent=Msa0244040-mRNA-1 |
| chr2_2 | CDS | 22005534 | 22005726 | 22005534 | ID=Msa0244040-mRNA-1:cds;Parent=Msa0244040-mRNA-1 |
| chr2_2 | CDS | 22005415 | 22005512 | 22005415 | ID=Msa0244040-mRNA-1:cds;Parent=Msa0244040-mRNA-1 |
| chr2_2 | CDS | 22000399 | 22001262 | 22000399 | ID=Msa0244040-mRNA-1:cds;Parent=Msa0244040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
