AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0244070


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0244070 MtrunA17_Chr2g0303381 80.783 281 26 4 1 255 1 279 1.44e-159 454
Msa0244070 MtrunA17_Chr2g0303381 84.889 225 32 1 239 463 8 230 1.13e-136 395
Msa0244070 MtrunA17_Chr2g0303401 80.783 281 26 4 1 255 1 279 1.44e-159 454
Msa0244070 MtrunA17_Chr2g0303401 84.889 225 32 1 239 463 8 230 1.13e-136 395
Msa0244070 MtrunA17_Chr8g0350531 44.219 493 214 8 12 463 12 484 5.26e-124 372
Msa0244070 MtrunA17_Chr8g0350531 44.776 268 116 5 12 255 276 535 4.09e-61 209
Msa0244070 MtrunA17_Chr2g0297811 53.597 278 101 7 4 255 3 278 2.96e-78 246
Msa0244070 MtrunA17_Chr2g0297811 53.304 227 99 4 239 463 7 228 7.59e-62 203
Msa0244070 MtrunA17_Chr2g0297801 53.597 278 101 7 4 255 3 278 2.96e-78 246
Msa0244070 MtrunA17_Chr2g0297801 53.304 227 99 4 239 463 7 228 7.59e-62 203
Msa0244070 MtrunA17_Chr2g0297791 53.597 278 101 7 4 255 3 278 2.96e-78 246
Msa0244070 MtrunA17_Chr2g0297791 53.304 227 99 4 239 463 7 228 7.59e-62 203
Msa0244070 MtrunA17_Chr8g0350511 44.776 268 116 5 12 255 12 271 6.56e-64 209
Msa0244070 MtrunA17_Chr8g0350511 46.512 215 103 2 249 463 18 220 1.93e-54 184
Msa0244070 MtrunA17_Chr8g0350521 44.776 268 116 5 12 255 12 271 6.56e-64 209
Msa0244070 MtrunA17_Chr8g0350521 46.512 215 103 2 249 463 18 220 1.93e-54 184
Msa0244070 MtrunA17_Chr8g0350541 44.776 268 116 5 12 255 12 271 6.56e-64 209
Msa0244070 MtrunA17_Chr8g0350541 46.512 215 103 2 249 463 18 220 1.93e-54 184
Msa0244070 MtrunA17_Chr8g0350501 44.776 268 116 5 12 255 12 271 6.56e-64 209
Msa0244070 MtrunA17_Chr8g0350501 46.512 215 103 2 249 463 18 220 1.93e-54 184
Msa0244070 MtrunA17_Chr2g0297731 44.404 277 110 9 14 255 2 269 1.87e-62 205
Msa0244070 MtrunA17_Chr2g0297731 48.095 210 93 6 259 463 16 214 1.48e-53 181
Msa0244070 MtrunA17_Chr2g0297761 44.000 275 108 12 16 255 4 267 8.18e-54 182
Msa0244070 MtrunA17_Chr2g0297761 46.667 210 93 8 261 463 18 215 5.42e-48 167
Msa0244070 MtrunA17_Chr2g0297771 44.000 275 108 12 16 255 4 267 8.18e-54 182
Msa0244070 MtrunA17_Chr2g0297771 46.667 210 93 8 261 463 18 215 5.42e-48 167
Msa0244070 MtrunA17_Chr2g0297781 44.000 275 108 12 16 255 4 267 8.18e-54 182
Msa0244070 MtrunA17_Chr2g0297781 46.667 210 93 8 261 463 18 215 5.42e-48 167
Msa0244070 MtrunA17_Chr8g0350551 42.481 266 111 6 12 255 12 257 1.17e-53 181
Msa0244070 MtrunA17_Chr8g0350551 42.326 215 98 2 249 463 18 206 4.52e-45 159
Msa0244070 MtrunA17_Chr8g0350441 40.377 265 124 8 14 255 13 266 1.22e-50 174
Msa0244070 MtrunA17_Chr8g0350441 40.278 216 113 5 249 463 17 217 2.61e-42 152
Msa0244070 MtrunA17_Chr8g0350431 40.000 265 125 8 14 255 13 266 5.36e-48 167
Msa0244070 MtrunA17_Chr8g0350431 40.278 216 113 5 249 463 17 217 2.22e-42 152
Msa0244070 MtrunA17_Chr8g0350421 40.000 265 125 8 14 255 13 266 5.36e-48 167
Msa0244070 MtrunA17_Chr8g0350421 40.278 216 113 5 249 463 17 217 2.22e-42 152
Msa0244070 MtrunA17_Chr8g0350411 40.000 265 125 8 14 255 13 266 5.36e-48 167
Msa0244070 MtrunA17_Chr8g0350411 40.278 216 113 5 249 463 17 217 2.22e-42 152
Msa0244070 MtrunA17_Chr8g0350451 40.370 270 120 10 9 255 9 260 1.38e-43 154
Msa0244070 MtrunA17_Chr8g0350451 41.791 201 96 5 264 463 31 211 3.69e-36 134
Msa0244070 MtrunA17_Chr8g0350461 40.370 270 120 10 9 255 9 260 1.38e-43 154
Msa0244070 MtrunA17_Chr8g0350461 41.791 201 96 5 264 463 31 211 3.69e-36 134
Msa0244070 MtrunA17_Chr8g0350471 40.370 270 120 10 9 255 9 260 1.38e-43 154
Msa0244070 MtrunA17_Chr8g0350471 41.791 201 96 5 264 463 31 211 3.69e-36 134
Msa0244070 MtrunA17_Chr2g0327611 33.871 186 102 6 273 454 49 217 1.32e-22 97.8
Msa0244070 MtrunA17_Chr2g0327611 29.565 230 119 9 15 222 28 236 1.04e-17 83.6
Msa0244070 MtrunA17_Chr6g0481561 30.493 223 116 9 241 450 23 219 5.71e-18 84.3
Msa0244070 MtrunA17_Chr6g0481561 27.407 270 144 11 16 255 34 281 1.66e-15 77.0
Msa0244070 MtrunA17_Chr2g0327601 32.984 191 95 8 269 450 50 216 1.29e-16 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 94 sgRNAs with CRISPR-Local

Find 352 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAAAATCATCTAAAGTTTC+TGG 0.145221 2_2:+22066272 None:intergenic
GGAAAATCATCTAAAGTTTC+TGG 0.145221 2_2:+22071476 None:intergenic
AATCAATTCCACTTCATTCT+AGG 0.205618 2_2:-22066224 Msa0244070:CDS
AATCAATTCCACTTCATTCT+AGG 0.205618 2_2:-22071428 Msa0244070:CDS
CCCACTACCACAAATTGTTT+TGG 0.245343 2_2:-22065758 Msa0244070:CDS
CCCACTACCACAAATTGTTT+TGG 0.245343 2_2:-22070962 Msa0244070:CDS
ATTCAATCCTAAGGAGAAAA+AGG 0.297710 2_2:-22066042 Msa0244070:CDS
ATTCAATCCTAAGGAGAAAA+AGG 0.297710 2_2:-22071246 Msa0244070:CDS
GGACACATATTCCATGGATT+TGG 0.302531 2_2:+22065806 None:intergenic
GGACACATATTCCATGGATT+TGG 0.302531 2_2:+22071010 None:intergenic
GATATGTCTGATCGAGCTTA+TGG 0.361529 2_2:+22066004 None:intergenic
GATATGTCTGATCGAGCTTA+TGG 0.361529 2_2:+22071208 None:intergenic
CCCAAAACAATTTGTGGTAG+TGG 0.365132 2_2:+22065757 None:intergenic
CCCAAAACAATTTGTGGTAG+TGG 0.365132 2_2:+22070961 None:intergenic
TACCTTGTCAATGATGATTC+TGG 0.380807 2_2:-22065963 Msa0244070:CDS
TACCTTGTCAATGATGATTC+TGG 0.380807 2_2:-22071167 Msa0244070:CDS
CGGGACATTTCGTTCGCGAT+TGG 0.385507 2_2:-22066166 Msa0244070:CDS
CGGGACATTTCGTTCGCGAT+TGG 0.385507 2_2:-22071370 Msa0244070:CDS
TCATCATTGATGATATTAAC+AGG 0.403312 2_2:+22066251 None:intergenic
TCATCATTGATGATATTAAC+AGG 0.403312 2_2:+22071455 None:intergenic
ACAATTTGTGGTAGTGGGCT+TGG 0.408360 2_2:+22065763 None:intergenic
ACAATTTGTGGTAGTGGGCT+TGG 0.408360 2_2:+22070967 None:intergenic
CACTGCACTAGCATAATTGA+TGG 0.434540 2_2:-22065933 Msa0244070:CDS
CACTGCACTAGCATAATTGA+TGG 0.434540 2_2:-22071137 Msa0244070:CDS
AATCAACTAATAACGGATTA+CGG 0.451454 2_2:-22070855 Msa0244070:intron
ATCATCAAACTCATCCTTTG+AGG 0.453286 2_2:+22065680 None:intergenic
ATCATCAAACTCATCCTTTG+AGG 0.453286 2_2:+22070884 None:intergenic
CGGTTCATCTTAGTATCAGC+TGG 0.454457 2_2:+22070798 None:intergenic
GAAAATCATCTAAAGTTTCT+GGG 0.456174 2_2:+22066273 None:intergenic
GAAAATCATCTAAAGTTTCT+GGG 0.456174 2_2:+22071477 None:intergenic
TGTGGTCCCAAAACAATTTG+TGG 0.468651 2_2:+22065751 None:intergenic
TGTGGTCCCAAAACAATTTG+TGG 0.468651 2_2:+22070955 None:intergenic
TATATCGATTCTAGTGTGAC+TGG 0.486159 2_2:-22065891 Msa0244070:CDS
TATATCGATTCTAGTGTGAC+TGG 0.486159 2_2:-22071095 Msa0244070:CDS
GCCACTGAGGTGTATAAAGA+TGG 0.489071 2_2:-22066197 Msa0244070:CDS
GCCACTGAGGTGTATAAAGA+TGG 0.489071 2_2:-22071401 Msa0244070:CDS
AACCGAGAGGTGTTCATTGA+GGG 0.499384 2_2:-22070780 Msa0244070:CDS
CGCCCTCAATGAACACCTCT+CGG 0.504404 2_2:+22070778 None:intergenic
TCTCTACAATCAACTAATAA+CGG 0.510522 2_2:-22070862 Msa0244070:CDS
CCAAAACAATTTGTGGTAGT+GGG 0.514829 2_2:+22065758 None:intergenic
CCAAAACAATTTGTGGTAGT+GGG 0.514829 2_2:+22070962 None:intergenic
TATAAAGATGGAAAAGGAAC+GGG 0.518546 2_2:-22066185 Msa0244070:CDS
TATAAAGATGGAAAAGGAAC+GGG 0.518546 2_2:-22071389 Msa0244070:CDS
ATCAACAGCAAATCACTCCT+TGG 0.519679 2_2:-22070744 Msa0244070:CDS
TAAATATCCATTCAATCCTA+AGG 0.520789 2_2:-22066051 Msa0244070:CDS
TAAATATCCATTCAATCCTA+AGG 0.520789 2_2:-22071255 Msa0244070:CDS
GCTGACTTCTCCAACTGCAT+TGG 0.521072 2_2:-22065867 Msa0244070:CDS
GCTGACTTCTCCAACTGCAT+TGG 0.521072 2_2:-22071071 Msa0244070:CDS
AATAACTTGTCCAATGCAGT+TGG 0.521593 2_2:+22065857 None:intergenic
AATAACTTGTCCAATGCAGT+TGG 0.521593 2_2:+22071061 None:intergenic
ATTTGTGGTAGTGGGCTTGG+AGG 0.527426 2_2:+22065766 None:intergenic
ATTTGTGGTAGTGGGCTTGG+AGG 0.527426 2_2:+22070970 None:intergenic
GAGGAGCTCTGTCGGAGCAA+TGG 0.538177 2_2:+22065785 None:intergenic
GAGGAGCTCTGTCGGAGCAA+TGG 0.538177 2_2:+22070989 None:intergenic
ATGAAGGTTATGATAACTAT+CGG 0.552996 2_2:-22066086 Msa0244070:CDS
ATGAAGGTTATGATAACTAT+CGG 0.552996 2_2:-22071290 Msa0244070:intron
TCGAGAATACATTGGCGTGA+AGG 0.556428 2_2:-22071504 Msa0244070:CDS
GAAAGAACATAAGAATATGA+AGG 0.556511 2_2:-22066102 Msa0244070:CDS
TAAGCATGTATCCAAATCCA+TGG 0.557313 2_2:-22065817 Msa0244070:CDS
TAAGCATGTATCCAAATCCA+TGG 0.557313 2_2:-22071021 Msa0244070:CDS
CATCTTAGTATCAGCTGGAT+CGG 0.557541 2_2:+22070803 None:intergenic
TGAATGGATATTTAGTGCCA+TGG 0.560003 2_2:+22066060 None:intergenic
TGAATGGATATTTAGTGCCA+TGG 0.560003 2_2:+22071264 None:intergenic
GAGGTGTATAAAGATGGAAA+AGG 0.564302 2_2:-22066191 Msa0244070:CDS
GAGGTGTATAAAGATGGAAA+AGG 0.564302 2_2:-22071395 Msa0244070:CDS
GAACCGAGAGGTGTTCATTG+AGG 0.566347 2_2:-22070781 Msa0244070:CDS
CAATCAAACTATATCCTCAA+AGG 0.567378 2_2:-22065694 Msa0244070:CDS
CAATCAAACTATATCCTCAA+AGG 0.567378 2_2:-22070898 Msa0244070:CDS
AGCAATGGACACATATTCCA+TGG 0.567858 2_2:+22065800 None:intergenic
AGCAATGGACACATATTCCA+TGG 0.567858 2_2:+22071004 None:intergenic
ATATCGATTCTAGTGTGACT+GGG 0.576037 2_2:-22065890 Msa0244070:CDS
ATATCGATTCTAGTGTGACT+GGG 0.576037 2_2:-22071094 Msa0244070:CDS
TGGGCTTGGAGGAGCTCTGT+CGG 0.577415 2_2:+22065777 None:intergenic
TGGGCTTGGAGGAGCTCTGT+CGG 0.577415 2_2:+22070981 None:intergenic
ATGATAACTATCGGAGGCCA+TGG 0.579102 2_2:-22066077 Msa0244070:CDS
ATGATAACTATCGGAGGCCA+TGG 0.579102 2_2:-22071281 Msa0244070:CDS
AGTTATTAAACATCTCAAGA+AGG 0.601516 2_2:-22065841 Msa0244070:CDS
GTATAAAGATGGAAAAGGAA+CGG 0.613441 2_2:-22066186 Msa0244070:CDS
GTATAAAGATGGAAAAGGAA+CGG 0.613441 2_2:-22071390 Msa0244070:CDS
TGGCGAAGCCTAGAATGAAG+TGG 0.614487 2_2:+22066216 None:intergenic
TGGCGAAGCCTAGAATGAAG+TGG 0.614487 2_2:+22071420 None:intergenic
TACCAGAATCATCATTGACA+AGG 0.665409 2_2:+22065961 None:intergenic
TACCAGAATCATCATTGACA+AGG 0.665409 2_2:+22071165 None:intergenic
TCCATCTTTATACACCTCAG+TGG 0.670679 2_2:+22066196 None:intergenic
TCCATCTTTATACACCTCAG+TGG 0.670679 2_2:+22071400 None:intergenic
CATCAATTATGCTAGTGCAG+TGG 0.677859 2_2:+22065934 None:intergenic
CATCAATTATGCTAGTGCAG+TGG 0.677859 2_2:+22071138 None:intergenic
CATTCTAGGCTTCGCCACTG+AGG 0.701525 2_2:-22066210 Msa0244070:CDS
CATTCTAGGCTTCGCCACTG+AGG 0.701525 2_2:-22071414 Msa0244070:CDS
AAGGTTATGATAACTATCGG+AGG 0.701816 2_2:-22066083 Msa0244070:CDS
AAGGTTATGATAACTATCGG+AGG 0.701816 2_2:-22071287 Msa0244070:CDS
TATCGATTCTAGTGTGACTG+GGG 0.708158 2_2:-22065889 Msa0244070:CDS
TATCGATTCTAGTGTGACTG+GGG 0.708158 2_2:-22071093 Msa0244070:CDS
TGATACTAAGATGAACCGAG+AGG 0.777827 2_2:-22070793 Msa0244070:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATATTTTATTTTTCGAT+CGG - chr2_2:22066624-22066643 Msa0244070:intron 10.0%
!! ATATAAATTTATTAGTGAAT+CGG + chr2_2:22067024-22067043 None:intergenic 10.0%
!!! TTTTTTATGAAATTTTGATT+TGG + chr2_2:22069932-22069951 None:intergenic 10.0%
!! TTAATTAAAATACCAATAAT+AGG - chr2_2:22070306-22070325 Msa0244070:intron 10.0%
!!! TAATATTTTATTTTTCGATC+GGG - chr2_2:22066625-22066644 Msa0244070:intron 15.0%
!!! GTTAATTATTTTTATCACTA+AGG + chr2_2:22066968-22066987 None:intergenic 15.0%
!! TATAAATTTATTAGTGAATC+GGG + chr2_2:22067023-22067042 None:intergenic 15.0%
!! AAAAATCATTATAGGAATTA+GGG + chr2_2:22067057-22067076 None:intergenic 15.0%
!! AAAAACAGAAAAATCATTAT+AGG + chr2_2:22067065-22067084 None:intergenic 15.0%
!! CTAAATTTAAATCATATTAG+AGG + chr2_2:22067650-22067669 None:intergenic 15.0%
!! CTCTAATATGATTTAAATTT+AGG - chr2_2:22067648-22067667 Msa0244070:intron 15.0%
!! ATTATCTAGTCAATATATTT+AGG - chr2_2:22068267-22068286 Msa0244070:intron 15.0%
!!! TTTTGGATTCATATTTTTTT+TGG - chr2_2:22068319-22068338 Msa0244070:intron 15.0%
!!! TTTTTACTATACTAAAGAAA+AGG + chr2_2:22069042-22069061 None:intergenic 15.0%
!!! TTTTTATGAGTTTATGTTTT+AGG + chr2_2:22069329-22069348 None:intergenic 15.0%
!! TACAAAAAAAAACACAATAA+CGG + chr2_2:22069456-22069475 None:intergenic 15.0%
!! TATAGATAAAAATTTAGAGA+CGG + chr2_2:22069490-22069509 None:intergenic 15.0%
!! TTATTTGTATTCAAAATTGA+GGG + chr2_2:22069575-22069594 None:intergenic 15.0%
!!! TTACACTTTTTAAATGATAA+AGG + chr2_2:22069714-22069733 None:intergenic 15.0%
!! TAACGTTTGAAAATTATTAA+CGG + chr2_2:22069959-22069978 None:intergenic 15.0%
!! ATTCTATTAAATCAAGTATT+TGG + chr2_2:22070270-22070289 None:intergenic 15.0%
!!! TAAGAATTAGTTTTTTCACT+CGG + chr2_2:22066830-22066849 None:intergenic 20.0%
!!! ATTTTTATCACTAAGGTTTT+GGG + chr2_2:22066961-22066980 None:intergenic 20.0%
!!! TATTTTTATCACTAAGGTTT+TGG + chr2_2:22066962-22066981 None:intergenic 20.0%
!! AAAATCATTATAGGAATTAG+GGG + chr2_2:22067056-22067075 None:intergenic 20.0%
!! GAAAAATCATTATAGGAATT+AGG + chr2_2:22067058-22067077 None:intergenic 20.0%
!!! AATATTTTTTTTTTTAGGCC+TGG - chr2_2:22067611-22067630 Msa0244070:intron 20.0%
!! TTTAATAATAGTTGTGATGA+TGG - chr2_2:22067954-22067973 Msa0244070:intron 20.0%
!!! AACTTTTTATGTTCACATTA+TGG + chr2_2:22068181-22068200 None:intergenic 20.0%
!! CATAAAAAGTTCTTAATGAA+AGG - chr2_2:22068190-22068209 Msa0244070:intron 20.0%
!! AAATTATAAGTTCCGTAAAA+AGG - chr2_2:22068659-22068678 Msa0244070:intron 20.0%
!! TTATTTAAGAAAGAAAGTAG+AGG - chr2_2:22068799-22068818 Msa0244070:intron 20.0%
!! TTTCCAATAAAGAACATTAT+TGG - chr2_2:22068916-22068935 Msa0244070:intron 20.0%
!! AAAAGTTATAATCAATTGGA+AGG + chr2_2:22069067-22069086 None:intergenic 20.0%
!! AGCAAAAAGTTATAATCAAT+TGG + chr2_2:22069071-22069090 None:intergenic 20.0%
!! TTTGCTAAAAATATATAGAG+TGG - chr2_2:22069085-22069104 Msa0244070:intron 20.0%
!! ATAATTCTAAATTGGAAATG+GGG + chr2_2:22069121-22069140 None:intergenic 20.0%
!! CATAATTCTAAATTGGAAAT+GGG + chr2_2:22069122-22069141 None:intergenic 20.0%
!! ACATAATTCTAAATTGGAAA+TGG + chr2_2:22069123-22069142 None:intergenic 20.0%
!!! AATATGTCATTTCTAAAATC+AGG - chr2_2:22069390-22069409 Msa0244070:intron 20.0%
!! GTTATTTGTATTCAAAATTG+AGG + chr2_2:22069576-22069595 None:intergenic 20.0%
!! TTATAGAAAAGGTTGTTTAA+GGG + chr2_2:22069787-22069806 None:intergenic 20.0%
!! ATTATAGAAAAGGTTGTTTA+AGG + chr2_2:22069788-22069807 None:intergenic 20.0%
!! AACGATCTTTATTATAGAAA+AGG + chr2_2:22069798-22069817 None:intergenic 20.0%
!!! AATTTTTATTAGGAACACTA+GGG + chr2_2:22070346-22070365 None:intergenic 20.0%
!!! TAATTTTTATTAGGAACACT+AGG + chr2_2:22070347-22070366 None:intergenic 20.0%
!!! ACTTATTAATTGATTTTCGT+TGG + chr2_2:22070500-22070519 None:intergenic 20.0%
!! TTTAATACACATACAAACAA+AGG - chr2_2:22070693-22070712 Msa0244070:intron 20.0%
!! GAAAATGAAAATATGGAAAA+TGG + chr2_2:22070839-22070858 None:intergenic 20.0%
! ATGTATTCTCGAAAAATTGT+TGG + chr2_2:22065704-22065723 None:intergenic 25.0%
!!! ACAATTTTTCGAGAATACAT+TGG - chr2_2:22065704-22065723 Msa0244070:CDS 25.0%
!! GAAAATCATCTAAAGTTTCT+GGG + chr2_2:22065742-22065761 None:intergenic 25.0%
!! TCATCATTGATGATATTAAC+AGG + chr2_2:22065764-22065783 None:intergenic 25.0%
! GAAAGAACATAAGAATATGA+AGG - chr2_2:22065910-22065929 Msa0244070:CDS 25.0%
! ATGAAGGTTATGATAACTAT+CGG - chr2_2:22065926-22065945 Msa0244070:CDS 25.0%
! TAAATATCCATTCAATCCTA+AGG - chr2_2:22065961-22065980 Msa0244070:CDS 25.0%
! AGTTATTAAACATCTCAAGA+AGG - chr2_2:22066171-22066190 Msa0244070:CDS 25.0%
! TCTCTACAATCAACTAATAA+CGG - chr2_2:22066354-22066373 Msa0244070:intron 25.0%
!!! AATCAACTAATAACGGATTA+CGG - chr2_2:22066361-22066380 Msa0244070:intron 25.0%
! CTAGTAATCAATTATTGGTA+AGG + chr2_2:22066585-22066604 None:intergenic 25.0%
! TGTAGCTAGTAATCAATTAT+TGG + chr2_2:22066590-22066609 None:intergenic 25.0%
! ATGACTCTATTTAGATATAC+AGG - chr2_2:22066872-22066891 Msa0244070:intron 25.0%
!!! TTTTGTTTTAAGTGCGATTA+GGG - chr2_2:22067197-22067216 Msa0244070:intron 25.0%
!!! TGTTTTTTATATGATCTCAG+AGG + chr2_2:22067358-22067377 None:intergenic 25.0%
! ATATGTCCTATTCAAGAATT+TGG + chr2_2:22067467-22067486 None:intergenic 25.0%
! ATATGATTTAAATTTAGGCC+CGG - chr2_2:22067653-22067672 Msa0244070:intron 25.0%
! ATAAAACTAAAAAACCTACC+GGG + chr2_2:22067674-22067693 None:intergenic 25.0%
! CATAAAACTAAAAAACCTAC+CGG + chr2_2:22067675-22067694 None:intergenic 25.0%
! TGTTTGAGGAAAAAAAAGAT+TGG + chr2_2:22068065-22068084 None:intergenic 25.0%
! AACAAAATGTCAATCTACTT+AGG - chr2_2:22068634-22068653 Msa0244070:intron 25.0%
!! GAGTCAATTATACCTTTTTA+CGG + chr2_2:22068674-22068693 None:intergenic 25.0%
!! AATGCATTGATCATTTCTTT+AGG + chr2_2:22068730-22068749 None:intergenic 25.0%
! AATGATCAATGCATTTGAAA+AGG - chr2_2:22068735-22068754 Msa0244070:intron 25.0%
! TGTCCAATAATGTTCTTTAT+TGG + chr2_2:22068922-22068941 None:intergenic 25.0%
! AGAGAAAAAAAAATAGCAAC+AGG - chr2_2:22069015-22069034 Msa0244070:intron 25.0%
! CGCATAACATAATTCTAAAT+TGG + chr2_2:22069129-22069148 None:intergenic 25.0%
! TACTCATTATATTCACACTA+TGG + chr2_2:22069183-22069202 None:intergenic 25.0%
!!! TTCAAAATTGAGGGTATTTT+TGG + chr2_2:22069566-22069585 None:intergenic 25.0%
! TCTATAATAAAGATCGTTGT+TGG - chr2_2:22069800-22069819 Msa0244070:intron 25.0%
! TAATAAAAAAAGCGGAAAGA+CGG - chr2_2:22069982-22070001 Msa0244070:intron 25.0%
! TTAAATCAAGTATTTGGTCA+TGG + chr2_2:22070264-22070283 None:intergenic 25.0%
!! ATTTTTATTAGGAACACTAG+GGG + chr2_2:22070345-22070364 None:intergenic 25.0%
! CATTATTAAATTGAGTTTGC+AGG - chr2_2:22070419-22070438 Msa0244070:intron 25.0%
!!! ATTAATTGATTTTCGTTGGT+GGG + chr2_2:22070496-22070515 None:intergenic 25.0%
!!! TATTAATTGATTTTCGTTGG+TGG + chr2_2:22070497-22070516 None:intergenic 25.0%
! CAAAAACAAAATCAAATGAG+TGG + chr2_2:22070565-22070584 None:intergenic 25.0%
! TGCATCTAGTAATTTGAAAA+GGG + chr2_2:22070603-22070622 None:intergenic 25.0%
! ATGCATCTAGTAATTTGAAA+AGG + chr2_2:22070604-22070623 None:intergenic 25.0%
!! TATTAATTAGGGGTATGTTT+AGG + chr2_2:22070640-22070659 None:intergenic 25.0%
! AAGAAATGTGAAAAATGCAA+AGG - chr2_2:22070775-22070794 Msa0244070:CDS 25.0%
! AGAAATGTGAAAAATGCAAA+GGG - chr2_2:22070776-22070795 Msa0244070:CDS 25.0%
! TGTGATCGAAAATGAAAATA+TGG + chr2_2:22070846-22070865 None:intergenic 25.0%
! ATGTATTCTCGAAAAATTGT+TGG + chr2_2:22065704-22065723 None:intergenic 25.0%
!!! ACAATTTTTCGAGAATACAT+TGG - chr2_2:22065704-22065723 Msa0244070:CDS 25.0%
!! GAAAATCATCTAAAGTTTCT+GGG + chr2_2:22065742-22065761 None:intergenic 25.0%
!! TCATCATTGATGATATTAAC+AGG + chr2_2:22065764-22065783 None:intergenic 25.0%
! GAAAGAACATAAGAATATGA+AGG - chr2_2:22065910-22065929 Msa0244070:CDS 25.0%
! ATGAAGGTTATGATAACTAT+CGG - chr2_2:22065926-22065945 Msa0244070:CDS 25.0%
! TAAATATCCATTCAATCCTA+AGG - chr2_2:22065961-22065980 Msa0244070:CDS 25.0%
! AGTTATTAAACATCTCAAGA+AGG - chr2_2:22066171-22066190 Msa0244070:CDS 25.0%
! AAAAATTGTTGGCCTCAAAA+CGG + chr2_2:22065693-22065712 None:intergenic 30.0%
! GGAAAATCATCTAAAGTTTC+TGG + chr2_2:22065743-22065762 None:intergenic 30.0%
AATCAATTCCACTTCATTCT+AGG - chr2_2:22065788-22065807 Msa0244070:CDS 30.0%
GTATAAAGATGGAAAAGGAA+CGG - chr2_2:22065826-22065845 Msa0244070:CDS 30.0%
TATAAAGATGGAAAAGGAAC+GGG - chr2_2:22065827-22065846 Msa0244070:CDS 30.0%
!!! TGTGTTTGAACACTTTTTCT+GGG + chr2_2:22065889-22065908 None:intergenic 30.0%
!!! TTGTGTTTGAACACTTTTTC+TGG + chr2_2:22065890-22065909 None:intergenic 30.0%
! TTTTTCTCCTTAGGATTGAA+TGG + chr2_2:22065971-22065990 None:intergenic 30.0%
ATTCAATCCTAAGGAGAAAA+AGG - chr2_2:22065970-22065989 Msa0244070:CDS 30.0%
!! CATAGTTGATATCCATTTTG+TGG + chr2_2:22066282-22066301 None:intergenic 30.0%
CAATCAAACTATATCCTCAA+AGG - chr2_2:22066318-22066337 Msa0244070:intron 30.0%
AAAATCACACACATGATCAT+GGG + chr2_2:22066703-22066722 None:intergenic 30.0%
TAAAATCACACACATGATCA+TGG + chr2_2:22066704-22066723 None:intergenic 30.0%
TAGGTGAACAAATAACTAAG+AGG + chr2_2:22066934-22066953 None:intergenic 30.0%
!!! CTTTTGTTTTAAGTGCGATT+AGG - chr2_2:22067196-22067215 Msa0244070:intron 30.0%
! TTTTATATGATCTCAGAGGT+AGG + chr2_2:22067354-22067373 None:intergenic 30.0%
!!! ACAAAAAACCCTAGTTTTGA+AGG - chr2_2:22067399-22067418 Msa0244070:intron 30.0%
!! TGATATTTTTGATCTCCTGA+TGG + chr2_2:22067426-22067445 None:intergenic 30.0%
! TATTCAAGAATTTGGTAGCA+TGG + chr2_2:22067459-22067478 None:intergenic 30.0%
ATGCTACCAAATTCTTGAAT+AGG - chr2_2:22067458-22067477 Msa0244070:intron 30.0%
TAGGGGAATTAATCATTTGA+AGG - chr2_2:22067504-22067523 Msa0244070:intron 30.0%
!!! TTTTTTTTTTTAGGCCTGGT+AGG - chr2_2:22067615-22067634 Msa0244070:intron 30.0%
GATATTGTGAGTTTCAATGA+CGG + chr2_2:22067826-22067845 None:intergenic 30.0%
! AACTTTTTATGTGCACATCA+TGG + chr2_2:22068089-22068108 None:intergenic 30.0%
TGTTCACATTATGGTTGTTA+GGG + chr2_2:22068172-22068191 None:intergenic 30.0%
ATGTTCACATTATGGTTGTT+AGG + chr2_2:22068173-22068192 None:intergenic 30.0%
! ATTCAGTTTTCTCTAGTTGT+GGG - chr2_2:22068290-22068309 Msa0244070:intron 30.0%
TTCTACTTTATCTTCAGTTG+TGG - chr2_2:22068445-22068464 Msa0244070:intron 30.0%
GAAAGAGATACAAAAAGTTG+GGG + chr2_2:22068581-22068600 None:intergenic 30.0%
CGAAAGAGATACAAAAAGTT+GGG + chr2_2:22068582-22068601 None:intergenic 30.0%
ACGAAAGAGATACAAAAAGT+TGG + chr2_2:22068583-22068602 None:intergenic 30.0%
TACCAAACAATTCATGACAA+GGG + chr2_2:22068883-22068902 None:intergenic 30.0%
TTCTTTATTGGAAACGAACT+CGG + chr2_2:22068910-22068929 None:intergenic 30.0%
! AATCTACGAAATCTAGAGTT+CGG + chr2_2:22068965-22068984 None:intergenic 30.0%
TCATTTCCCCATATAATTGA+AGG - chr2_2:22068984-22069003 Msa0244070:intron 30.0%
CATTTCCCCATATAATTGAA+GGG - chr2_2:22068985-22069004 Msa0244070:intron 30.0%
TGTTGACCCTTCAATTATAT+GGG + chr2_2:22068994-22069013 None:intergenic 30.0%
TATTCACACTATGGTTGTTA+CGG + chr2_2:22069174-22069193 None:intergenic 30.0%
! ACAACCCCTTTCAAAAATTT+TGG - chr2_2:22069525-22069544 Msa0244070:intron 30.0%
! CAACCCCTTTCAAAAATTTT+GGG - chr2_2:22069526-22069545 Msa0244070:intron 30.0%
!! TCAGCCCAAAATTTTTGAAA+GGG + chr2_2:22069533-22069552 None:intergenic 30.0%
! GTTGTTTAAGGGTATAATTG+GGG + chr2_2:22069776-22069795 None:intergenic 30.0%
! GGTTGTTTAAGGGTATAATT+GGG + chr2_2:22069777-22069796 None:intergenic 30.0%
! AGGTTGTTTAAGGGTATAAT+TGG + chr2_2:22069778-22069797 None:intergenic 30.0%
CGTTAGCGTAATAAAAAAAG+CGG - chr2_2:22069974-22069993 Msa0244070:intron 30.0%
ATAAATACTAGCGAAAAGAC+AGG + chr2_2:22070010-22070029 None:intergenic 30.0%
TGTCTTTGTATGCCTATTAT+TGG + chr2_2:22070321-22070340 None:intergenic 30.0%
CAAATGAGTGGTTACATTAA+GGG + chr2_2:22070553-22070572 None:intergenic 30.0%
TCAAATGAGTGGTTACATTA+AGG + chr2_2:22070554-22070573 None:intergenic 30.0%
CATCTAGTAATTTGAAAAGG+GGG + chr2_2:22070601-22070620 None:intergenic 30.0%
GCATCTAGTAATTTGAAAAG+GGG + chr2_2:22070602-22070621 None:intergenic 30.0%
GAAATGTGAAAAATGCAAAG+GGG - chr2_2:22070777-22070796 Msa0244070:CDS 30.0%
AAATGTGAAAAATGCAAAGG+GGG - chr2_2:22070778-22070797 Msa0244070:CDS 30.0%
! AAAAATTGTTGGCCTCAAAA+CGG + chr2_2:22065693-22065712 None:intergenic 30.0%
! GGAAAATCATCTAAAGTTTC+TGG + chr2_2:22065743-22065762 None:intergenic 30.0%
AATCAATTCCACTTCATTCT+AGG - chr2_2:22065788-22065807 Msa0244070:CDS 30.0%
GTATAAAGATGGAAAAGGAA+CGG - chr2_2:22065826-22065845 Msa0244070:CDS 30.0%
TATAAAGATGGAAAAGGAAC+GGG - chr2_2:22065827-22065846 Msa0244070:CDS 30.0%
!!! TGTGTTTGAACACTTTTTCT+GGG + chr2_2:22065889-22065908 None:intergenic 30.0%
!!! TTGTGTTTGAACACTTTTTC+TGG + chr2_2:22065890-22065909 None:intergenic 30.0%
! TTTTTCTCCTTAGGATTGAA+TGG + chr2_2:22065971-22065990 None:intergenic 30.0%
ATTCAATCCTAAGGAGAAAA+AGG - chr2_2:22065970-22065989 Msa0244070:CDS 30.0%
!! CATAGTTGATATCCATTTTG+TGG + chr2_2:22066282-22066301 None:intergenic 30.0%
CAATCAAACTATATCCTCAA+AGG - chr2_2:22066318-22066337 Msa0244070:intron 30.0%
!!! ACAATATCAATGCCGTTTTG+AGG - chr2_2:22065678-22065697 Msa0244070:CDS 35.0%
GAGGTGTATAAAGATGGAAA+AGG - chr2_2:22065821-22065840 Msa0244070:CDS 35.0%
AAGGTTATGATAACTATCGG+AGG - chr2_2:22065929-22065948 Msa0244070:CDS 35.0%
TGAATGGATATTTAGTGCCA+TGG + chr2_2:22065955-22065974 None:intergenic 35.0%
ATCCTAAGGAGAAAAAGGTA+TGG - chr2_2:22065975-22065994 Msa0244070:CDS 35.0%
! ATCCATACCTTTTTCTCCTT+AGG + chr2_2:22065980-22065999 None:intergenic 35.0%
TACCTTGTCAATGATGATTC+TGG - chr2_2:22066049-22066068 Msa0244070:CDS 35.0%
TACCAGAATCATCATTGACA+AGG + chr2_2:22066054-22066073 None:intergenic 35.0%
!! TATATCGATTCTAGTGTGAC+TGG - chr2_2:22066121-22066140 Msa0244070:CDS 35.0%
!! ATATCGATTCTAGTGTGACT+GGG - chr2_2:22066122-22066141 Msa0244070:CDS 35.0%
! AATAACTTGTCCAATGCAGT+TGG + chr2_2:22066158-22066177 None:intergenic 35.0%
TAAGCATGTATCCAAATCCA+TGG - chr2_2:22066195-22066214 Msa0244070:CDS 35.0%
CCAAAACAATTTGTGGTAGT+GGG + chr2_2:22066257-22066276 None:intergenic 35.0%
! CCACTACCACAAATTGTTTT+GGG - chr2_2:22066255-22066274 Msa0244070:CDS 35.0%
!!! ATTGTTTTGGGACCACAAAA+TGG - chr2_2:22066267-22066286 Msa0244070:CDS 35.0%
ATCATCAAACTCATCCTTTG+AGG + chr2_2:22066335-22066354 None:intergenic 35.0%
! TTACGGTGAGCTTAAACTTT+TGG - chr2_2:22066378-22066397 Msa0244070:intron 35.0%
AGCTAAGAAGAAAGTTAAGG+TGG + chr2_2:22067236-22067255 None:intergenic 35.0%
CCTAGCTAAGAAGAAAGTTA+AGG + chr2_2:22067239-22067258 None:intergenic 35.0%
CCTTAACTTTCTTCTTAGCT+AGG - chr2_2:22067236-22067255 Msa0244070:intron 35.0%
!!! AAACTAGGGTTTTTTGTTCC+TGG + chr2_2:22067396-22067415 None:intergenic 35.0%
TAGGACATATGTTCACATGA+TGG - chr2_2:22067477-22067496 Msa0244070:intron 35.0%
ATGTTCACATGATGGTTGTT+AGG - chr2_2:22067485-22067504 Msa0244070:intron 35.0%
TGTTCACATGATGGTTGTTA+GGG - chr2_2:22067486-22067505 Msa0244070:intron 35.0%
!! AGAGGTATTTAAAACCTACC+AGG + chr2_2:22067632-22067651 None:intergenic 35.0%
!! GTTGTGATGATGGTTTAAAG+TGG - chr2_2:22067964-22067983 Msa0244070:intron 35.0%
!! ATAATAAAGCCAAGAGCACT+TGG - chr2_2:22068027-22068046 Msa0244070:intron 35.0%
! GATTCAGTTTTCTCTAGTTG+TGG - chr2_2:22068289-22068308 Msa0244070:intron 35.0%
AGGATACAACAAGAATGGAA+CGG + chr2_2:22068396-22068415 None:intergenic 35.0%
! TCCATTCTTGTTGTATCCTT+TGG - chr2_2:22068397-22068416 Msa0244070:intron 35.0%
! CCATTCTTGTTGTATCCTTT+GGG - chr2_2:22068398-22068417 Msa0244070:intron 35.0%
ACCAAACAATTCATGACAAG+GGG + chr2_2:22068882-22068901 None:intergenic 35.0%
GTACCAAACAATTCATGACA+AGG + chr2_2:22068884-22068903 None:intergenic 35.0%
GTTGACCCTTCAATTATATG+GGG + chr2_2:22068993-22069012 None:intergenic 35.0%
! GTGTTGACCCTTCAATTATA+TGG + chr2_2:22068995-22069014 None:intergenic 35.0%
ATTCACACTATGGTTGTTAC+GGG + chr2_2:22069173-22069192 None:intergenic 35.0%
!! CAGCCCAAAATTTTTGAAAG+GGG + chr2_2:22069532-22069551 None:intergenic 35.0%
! GTCAGCCCAAAATTTTTGAA+AGG + chr2_2:22069534-22069553 None:intergenic 35.0%
TAAATCTCACATACGAGTAG+AGG + chr2_2:22070122-22070141 None:intergenic 35.0%
ACTCGTATGTGAGATTTAAG+TGG - chr2_2:22070124-22070143 Msa0244070:intron 35.0%
GAGTTTGCAGGCTTATAAAA+AGG - chr2_2:22070431-22070450 Msa0244070:intron 35.0%
! AAAAAGGCATACCAAGAGTT+TGG - chr2_2:22070447-22070466 Msa0244070:intron 35.0%
TGAAAAGGGGGTTACATTTA+GGG + chr2_2:22070589-22070608 None:intergenic 35.0%
TTGAAAAGGGGGTTACATTT+AGG + chr2_2:22070590-22070609 None:intergenic 35.0%
AATGTGAAAAATGCAAAGGG+GGG - chr2_2:22070779-22070798 Msa0244070:CDS 35.0%
!!! ACAATATCAATGCCGTTTTG+AGG - chr2_2:22065678-22065697 Msa0244070:CDS 35.0%
GAGGTGTATAAAGATGGAAA+AGG - chr2_2:22065821-22065840 Msa0244070:CDS 35.0%
AAGGTTATGATAACTATCGG+AGG - chr2_2:22065929-22065948 Msa0244070:CDS 35.0%
TGAATGGATATTTAGTGCCA+TGG + chr2_2:22065955-22065974 None:intergenic 35.0%
ATCCTAAGGAGAAAAAGGTA+TGG - chr2_2:22065975-22065994 Msa0244070:CDS 35.0%
! ATCCATACCTTTTTCTCCTT+AGG + chr2_2:22065980-22065999 None:intergenic 35.0%
TACCTTGTCAATGATGATTC+TGG - chr2_2:22066049-22066068 Msa0244070:CDS 35.0%
TACCAGAATCATCATTGACA+AGG + chr2_2:22066054-22066073 None:intergenic 35.0%
!! TATATCGATTCTAGTGTGAC+TGG - chr2_2:22066121-22066140 Msa0244070:CDS 35.0%
!! ATATCGATTCTAGTGTGACT+GGG - chr2_2:22066122-22066141 Msa0244070:CDS 35.0%
! AATAACTTGTCCAATGCAGT+TGG + chr2_2:22066158-22066177 None:intergenic 35.0%
TAAGCATGTATCCAAATCCA+TGG - chr2_2:22066195-22066214 Msa0244070:CDS 35.0%
CCAAAACAATTTGTGGTAGT+GGG + chr2_2:22066257-22066276 None:intergenic 35.0%
! CCACTACCACAAATTGTTTT+GGG - chr2_2:22066255-22066274 Msa0244070:CDS 35.0%
!!! ATTGTTTTGGGACCACAAAA+TGG - chr2_2:22066267-22066286 Msa0244070:CDS 35.0%
ATCATCAAACTCATCCTTTG+AGG + chr2_2:22066335-22066354 None:intergenic 35.0%
TCCATCTTTATACACCTCAG+TGG + chr2_2:22065819-22065838 None:intergenic 40.0%
GATATGTCTGATCGAGCTTA+TGG + chr2_2:22066011-22066030 None:intergenic 40.0%
CATCAATTATGCTAGTGCAG+TGG + chr2_2:22066081-22066100 None:intergenic 40.0%
CACTGCACTAGCATAATTGA+TGG - chr2_2:22066079-22066098 Msa0244070:CDS 40.0%
!! TATCGATTCTAGTGTGACTG+GGG - chr2_2:22066123-22066142 Msa0244070:CDS 40.0%
GGACACATATTCCATGGATT+TGG + chr2_2:22066209-22066228 None:intergenic 40.0%
AGCAATGGACACATATTCCA+TGG + chr2_2:22066215-22066234 None:intergenic 40.0%
! CCCACTACCACAAATTGTTT+TGG - chr2_2:22066254-22066273 Msa0244070:CDS 40.0%
CCCAAAACAATTTGTGGTAG+TGG + chr2_2:22066258-22066277 None:intergenic 40.0%
TGTGGTCCCAAAACAATTTG+TGG + chr2_2:22066264-22066283 None:intergenic 40.0%
CATCTTAGTATCAGCTGGAT+CGG + chr2_2:22066416-22066435 None:intergenic 40.0%
TGATACTAAGATGAACCGAG+AGG - chr2_2:22066423-22066442 Msa0244070:intron 40.0%
ATCAACAGCAAATCACTCCT+TGG - chr2_2:22066472-22066491 Msa0244070:intron 40.0%
! CACTCCTTGGACTTTTTGTT+TGG - chr2_2:22066485-22066504 Msa0244070:intron 40.0%
CACTCCAAACAAAAAGTCCA+AGG + chr2_2:22066492-22066511 None:intergenic 40.0%
AGCATTTCCTCCAAGATGTA+AGG + chr2_2:22066553-22066572 None:intergenic 40.0%
!!! CACTAAGGTTTTGGGAGAAT+AGG + chr2_2:22066953-22066972 None:intergenic 40.0%
TCATTATAGGAATTAGGGGC+TGG + chr2_2:22067052-22067071 None:intergenic 40.0%
! AGGTAGGTAAGTTTTCAGTG+AGG + chr2_2:22067338-22067357 None:intergenic 40.0%
! CTGATGGACCTTCAAAACTA+GGG + chr2_2:22067410-22067429 None:intergenic 40.0%
! TCAAGAATTTGGTAGCATGG+TGG + chr2_2:22067456-22067475 None:intergenic 40.0%
GTTCACATGATGGTTGTTAG+GGG - chr2_2:22067487-22067506 Msa0244070:intron 40.0%
GATTTAAATTTAGGCCCGGT+AGG - chr2_2:22067657-22067676 Msa0244070:intron 40.0%
TATATTTGTCGAGCACGTTG+AGG + chr2_2:22067755-22067774 None:intergenic 40.0%
!! GCTCTTGGCTTTATTATCAC+CGG + chr2_2:22068024-22068043 None:intergenic 40.0%
CCCAAAGGATACAACAAGAA+TGG + chr2_2:22068401-22068420 None:intergenic 40.0%
! TTCAGTTGTGGTAACTTGTC+TGG - chr2_2:22068457-22068476 Msa0244070:intron 40.0%
CACGATATACTCCATTTGAG+TGG - chr2_2:22068534-22068553 Msa0244070:intron 40.0%
ATTTGAGTGGTACCATTGGT+CGG - chr2_2:22068547-22068566 Msa0244070:intron 40.0%
TCCCCTTGTCATGAATTGTT+TGG - chr2_2:22068878-22068897 Msa0244070:intron 40.0%
GTGTTGGAATTCCAAACTCT+TGG + chr2_2:22070461-22070480 None:intergenic 40.0%
!! TGGGTTTGATTGGTTTGTGT+TGG + chr2_2:22070477-22070496 None:intergenic 40.0%
!!! TTTTCGTTGGTGGGTTTGAT+TGG + chr2_2:22070487-22070506 None:intergenic 40.0%
TGAGTGGTTACATTAAGGGA+CGG + chr2_2:22070549-22070568 None:intergenic 40.0%
TCCATCTTTATACACCTCAG+TGG + chr2_2:22065819-22065838 None:intergenic 40.0%
GATATGTCTGATCGAGCTTA+TGG + chr2_2:22066011-22066030 None:intergenic 40.0%
CATCAATTATGCTAGTGCAG+TGG + chr2_2:22066081-22066100 None:intergenic 40.0%
CACTGCACTAGCATAATTGA+TGG - chr2_2:22066079-22066098 Msa0244070:CDS 40.0%
!! TATCGATTCTAGTGTGACTG+GGG - chr2_2:22066123-22066142 Msa0244070:CDS 40.0%
GGACACATATTCCATGGATT+TGG + chr2_2:22066209-22066228 None:intergenic 40.0%
AGCAATGGACACATATTCCA+TGG + chr2_2:22066215-22066234 None:intergenic 40.0%
! CCCACTACCACAAATTGTTT+TGG - chr2_2:22066254-22066273 Msa0244070:CDS 40.0%
CCCAAAACAATTTGTGGTAG+TGG + chr2_2:22066258-22066277 None:intergenic 40.0%
TGTGGTCCCAAAACAATTTG+TGG + chr2_2:22066264-22066283 None:intergenic 40.0%
TCGAGAATACATTGGCGTGA+AGG - chr2_2:22065712-22065731 Msa0244070:CDS 45.0%
GCCACTGAGGTGTATAAAGA+TGG - chr2_2:22065815-22065834 Msa0244070:CDS 45.0%
ATGATAACTATCGGAGGCCA+TGG - chr2_2:22065935-22065954 Msa0244070:CDS 45.0%
!! ACAATTTGTGGTAGTGGGCT+TGG + chr2_2:22066252-22066271 None:intergenic 45.0%
! GGTGAGCTTAAACTTTTGGC+AGG - chr2_2:22066382-22066401 Msa0244070:intron 45.0%
CGGTTCATCTTAGTATCAGC+TGG + chr2_2:22066421-22066440 None:intergenic 45.0%
!! AACCGAGAGGTGTTCATTGA+GGG - chr2_2:22066436-22066455 Msa0244070:intron 45.0%
TAAGGCTCGATGTCATTGCT+CGG + chr2_2:22066535-22066554 None:intergenic 45.0%
TGACATCGAGCCTTACATCT+TGG - chr2_2:22066540-22066559 Msa0244070:intron 45.0%
GGAAACATTGGTCGTAGGTT+AGG + chr2_2:22067265-22067284 None:intergenic 45.0%
CGAAGAAAGGTGGGAAACAT+TGG + chr2_2:22067277-22067296 None:intergenic 45.0%
GATGATCAGCGAAGAAAGGT+GGG + chr2_2:22067286-22067305 None:intergenic 45.0%
TGATGATCAGCGAAGAAAGG+TGG + chr2_2:22067287-22067306 None:intergenic 45.0%
GCATGATGATCAGCGAAGAA+AGG + chr2_2:22067290-22067309 None:intergenic 45.0%
CAATGCTAACGTATGAGGAC+TGG + chr2_2:22067315-22067334 None:intergenic 45.0%
TGAGGCAATGCTAACGTATG+AGG + chr2_2:22067320-22067339 None:intergenic 45.0%
! TTTTGTTCCTGGCGCAGTTT+TGG + chr2_2:22067385-22067404 None:intergenic 45.0%
! CCTGATGGACCTTCAAAACT+AGG + chr2_2:22067411-22067430 None:intergenic 45.0%
!!! CCTAGTTTTGAAGGTCCATC+AGG - chr2_2:22067408-22067427 Msa0244070:intron 45.0%
AAGTGGTGTTTCCTAGAGCT+AGG - chr2_2:22067981-22068000 Msa0244070:intron 45.0%
AGTGGTGTTTCCTAGAGCTA+GGG - chr2_2:22067982-22068001 Msa0244070:intron 45.0%
GGGGCTGATGACTTAAAATC+CGG - chr2_2:22068002-22068021 Msa0244070:intron 45.0%
GTGCACATCATGGTTGTTTG+AGG + chr2_2:22068079-22068098 None:intergenic 45.0%
! CTAGTTGTGGGTCGTGATTT+TGG - chr2_2:22068302-22068321 Msa0244070:intron 45.0%
ATATGCCGATCTTTCCGCAA+CGG - chr2_2:22068344-22068363 Msa0244070:intron 45.0%
! TCTTGTTGTATCCTTTGGGC+CGG - chr2_2:22068402-22068421 Msa0244070:intron 45.0%
CAAAACCAACCCAAACTCTC+CGG + chr2_2:22068424-22068443 None:intergenic 45.0%
CTCCATTTGAGTGGTACCAT+TGG - chr2_2:22068543-22068562 Msa0244070:intron 45.0%
GACCAATGGTACCACTCAAA+TGG + chr2_2:22068548-22068567 None:intergenic 45.0%
! AAATCTAGAGTTCGGCTGCA+AGG + chr2_2:22068957-22068976 None:intergenic 45.0%
TTCGCGAGCTATCAACTCAA+AGG + chr2_2:22069366-22069385 None:intergenic 45.0%
!! TGAGTTGATAGCTCGCGAAT+AGG - chr2_2:22069367-22069386 Msa0244070:intron 45.0%
ACATACGAGTAGAGGAGATG+AGG + chr2_2:22070114-22070133 None:intergenic 45.0%
TGGTTACATTAAGGGACGGA+GGG + chr2_2:22070545-22070564 None:intergenic 45.0%
TGCAAAGGGGGGTTACATTA+AGG - chr2_2:22070790-22070809 Msa0244070:CDS 45.0%
GCAAAGGGGGGTTACATTAA+GGG - chr2_2:22070791-22070810 Msa0244070:CDS 45.0%
TCGAGAATACATTGGCGTGA+AGG - chr2_2:22065712-22065731 Msa0244070:CDS 45.0%
GCCACTGAGGTGTATAAAGA+TGG - chr2_2:22065815-22065834 Msa0244070:CDS 45.0%
ATGATAACTATCGGAGGCCA+TGG - chr2_2:22065935-22065954 Msa0244070:CDS 45.0%
!! ACAATTTGTGGTAGTGGGCT+TGG + chr2_2:22066252-22066271 None:intergenic 45.0%
!!! TATCTAATATTTTTTTTTTT+AGG - chr2_2:22067606-22067625 Msa0244070:intron 5.0%
!!! TCTTTTTTTTAATTTTTATT+AGG + chr2_2:22070356-22070375 None:intergenic 5.0%
TGGCGAAGCCTAGAATGAAG+TGG + chr2_2:22065799-22065818 None:intergenic 50.0%
! GCTGACTTCTCCAACTGCAT+TGG - chr2_2:22066145-22066164 Msa0244070:CDS 50.0%
!! ATTTGTGGTAGTGGGCTTGG+AGG + chr2_2:22066249-22066268 None:intergenic 50.0%
!! GAACCGAGAGGTGTTCATTG+AGG - chr2_2:22066435-22066454 Msa0244070:intron 50.0%
CATCGAGCCTTACATCTTGG+AGG - chr2_2:22066543-22066562 Msa0244070:intron 50.0%
CTGCATGTGTGTGTTGTGCT+TGG - chr2_2:22066734-22066753 Msa0244070:intron 50.0%
AGGTGGGAAACATTGGTCGT+AGG + chr2_2:22067270-22067289 None:intergenic 50.0%
GTGGTGTTTCCTAGAGCTAG+GGG - chr2_2:22067983-22068002 Msa0244070:intron 50.0%
CCATCTCATCCAAGTGCTCT+TGG + chr2_2:22068039-22068058 None:intergenic 50.0%
!! CCAAGAGCACTTGGATGAGA+TGG - chr2_2:22068036-22068055 Msa0244070:intron 50.0%
AACCACCGTTGCGGAAAGAT+CGG + chr2_2:22068352-22068371 None:intergenic 50.0%
! GGGGTATTAGATCCGACCAA+TGG + chr2_2:22068562-22068581 None:intergenic 50.0%
GTGGTTACATTAAGGGACGG+AGG + chr2_2:22070546-22070565 None:intergenic 50.0%
AGGGGGGTTACATTAAGGGA+CGG - chr2_2:22070795-22070814 Msa0244070:CDS 50.0%
GGGTTACATTAAGGGACGGA+GGG - chr2_2:22070799-22070818 Msa0244070:CDS 50.0%
TGGCGAAGCCTAGAATGAAG+TGG + chr2_2:22065799-22065818 None:intergenic 50.0%
! GCTGACTTCTCCAACTGCAT+TGG - chr2_2:22066145-22066164 Msa0244070:CDS 50.0%
!! ATTTGTGGTAGTGGGCTTGG+AGG + chr2_2:22066249-22066268 None:intergenic 50.0%
CATTCTAGGCTTCGCCACTG+AGG - chr2_2:22065802-22065821 Msa0244070:CDS 55.0%
CGGGACATTTCGTTCGCGAT+TGG - chr2_2:22065846-22065865 Msa0244070:CDS 55.0%
CGCCCTCAATGAACACCTCT+CGG + chr2_2:22066441-22066460 None:intergenic 55.0%
! GATGTCATTGCTCGGTGGGT+TGG + chr2_2:22066527-22066546 None:intergenic 55.0%
GCTCGATGTCATTGCTCGGT+GGG + chr2_2:22066531-22066550 None:intergenic 55.0%
ACACGAACCAAAACTGCGCC+AGG - chr2_2:22067375-22067394 Msa0244070:intron 55.0%
! AGTCATCAGCCCCTAGCTCT+AGG + chr2_2:22067995-22068014 None:intergenic 55.0%
ATGAAGCGCAACCACCGTTG+CGG + chr2_2:22068361-22068380 None:intergenic 55.0%
ATCCTTTGGGCCGGAGAGTT+TGG - chr2_2:22068411-22068430 Msa0244070:intron 55.0%
TCCTTTGGGCCGGAGAGTTT+GGG - chr2_2:22068412-22068431 Msa0244070:intron 55.0%
GGGGTTACATTAAGGGACGG+AGG - chr2_2:22070798-22070817 Msa0244070:CDS 55.0%
CATTCTAGGCTTCGCCACTG+AGG - chr2_2:22065802-22065821 Msa0244070:CDS 55.0%
CGGGACATTTCGTTCGCGAT+TGG - chr2_2:22065846-22065865 Msa0244070:CDS 55.0%
GAGGAGCTCTGTCGGAGCAA+TGG + chr2_2:22066230-22066249 None:intergenic 60.0%
TGGGCTTGGAGGAGCTCTGT+CGG + chr2_2:22066238-22066257 None:intergenic 60.0%
GGCTCGATGTCATTGCTCGG+TGG + chr2_2:22066532-22066551 None:intergenic 60.0%
TGCCGATCTTTCCGCAACGG+TGG - chr2_2:22068347-22068366 Msa0244070:intron 60.0%
GCAACGGTGGTTGCGCTTCA+TGG - chr2_2:22068360-22068379 Msa0244070:intron 60.0%
GGTTGCGCTTCATGGTCTGC+AGG - chr2_2:22068368-22068387 Msa0244070:intron 60.0%
ACCCAAACTCTCCGGCCCAA+AGG + chr2_2:22068416-22068435 None:intergenic 60.0%
TTGGGCCGGAGAGTTTGGGT+TGG - chr2_2:22068416-22068435 Msa0244070:intron 60.0%
GAGGAGCTCTGTCGGAGCAA+TGG + chr2_2:22066230-22066249 None:intergenic 60.0%
TGGGCTTGGAGGAGCTCTGT+CGG + chr2_2:22066238-22066257 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 22065662 22071576 22065662 ID=Msa0244070;Name=Msa0244070
chr2_2 mRNA 22065662 22071576 22065662 ID=Msa0244070-mRNA-1;Parent=Msa0244070;Name=Msa0244070-mRNA-1;_AED=0.34;_eAED=0.35;_QI=0|0|0|1|0|0|5|0|467
chr2_2 exon 22071343 22071576 22071343 ID=Msa0244070-mRNA-1:exon:8574;Parent=Msa0244070-mRNA-1
chr2_2 exon 22071067 22071306 22071067 ID=Msa0244070-mRNA-1:exon:8573;Parent=Msa0244070-mRNA-1
chr2_2 exon 22070856 22071048 22070856 ID=Msa0244070-mRNA-1:exon:8572;Parent=Msa0244070-mRNA-1
chr2_2 exon 22070737 22070834 22070737 ID=Msa0244070-mRNA-1:exon:8571;Parent=Msa0244070-mRNA-1
chr2_2 exon 22065662 22066300 22065662 ID=Msa0244070-mRNA-1:exon:8570;Parent=Msa0244070-mRNA-1
chr2_2 CDS 22071343 22071576 22071343 ID=Msa0244070-mRNA-1:cds;Parent=Msa0244070-mRNA-1
chr2_2 CDS 22071067 22071306 22071067 ID=Msa0244070-mRNA-1:cds;Parent=Msa0244070-mRNA-1
chr2_2 CDS 22070856 22071048 22070856 ID=Msa0244070-mRNA-1:cds;Parent=Msa0244070-mRNA-1
chr2_2 CDS 22070737 22070834 22070737 ID=Msa0244070-mRNA-1:cds;Parent=Msa0244070-mRNA-1
chr2_2 CDS 22065662 22066300 22065662 ID=Msa0244070-mRNA-1:cds;Parent=Msa0244070-mRNA-1
Gene Sequence

>Msa0244070

ATGTCTGATCACTCTCACAATATCAATGCCGTTTTGAGGCCAACAATTTTTCGAGAATACATTGGCGTGAAGGATGACCCAGAAACTTTAGATGATTTTCCTGTTAATATCATCAATGATGATGTCAATCAATTCCACTTCATTCTAGGCTTCGCCACTGAGGTGTATAAAGATGGAAAAGGAACGGGACATTTCGTTCGCGATTGGAACTTTGATTACTTCAGCCCAGAAAAAGTTATGATAACTATCGGAGGCCATGGCACTAAATATCCATTCAATCCTAAGGAGAAAAAGGTATGGATTTTCAATGCCATAAGCTCGATCAGACATATCATTCAAGACTATGAGAACTACCTTGTCAATGATGATTCTGGTAGCTGCCACTGCACTAGCATAATTGATGGTATTGATATTAACTATGAGTATATCGATTCTAGTGTGACTGGGGCTGACTTCTCCAACTGCATTGGACAAAAGGATAAGCATGTATCCAAATCCATGGAATATGTGTCCATTGCTCCGACAGAGCTCCTCCAAGCCCACTACCACAAATTGTTTTGGGACCACAAAATGGATATCAACTATGTTGACTACAAGTTCTACAATCAAACTATATCCTCAAAGGATGAGTTTGATGATCTCTACAATCAACTAATAACGGATTACGGTGTTAGTACCGATCCAGCTGATACTAAGATGAACCGAGAGGTGTTCATTGAGGGCGTCACAAGACTGATCAACAGCAAATCACTCCTTGGACTTTTTGATGACCCAGAAACTTTAGATGATTTTCCTGTTAATATCATCAATGATGATGTCAATCAATTCCACTTCATTCTAGGCTTCGCCACTGAGGTGTATAAAGATGGAAAAGGAACGGGACATTTCGTTCGCGATTGGAACTTTGATTACTTCAGCCCAGAAAAAGTGTTCAAACACAAGAAAGAACATAAGAATATGAAGGTTATGATAACTATCGGAGGCCATGGCACTAAATATCCATTCAATCCTAAGGAGAAAAAGGTATGGATTTTCAATGCCATAAGCTCGATCAGACATATCATTCAAGACTATGAGAACTACCTTGTCAATGATGATTCTGGTAGCTGCCACTGCACTAGCATAATTGATGGTATTGATATTAACTACGAGTATATCGATTCTAGTGTGACTGGGGCTGACTTCTCCAACTGCATTGGACAAGTTATTAAACATCTCAAGAAGGATAAGCATGTATCCAAATCCATGGAATATGTGTCCATTGCTCCGACAGAGCTCCTCCAAGCCCACTACCACAAATTGTTTTGGGACCACAAAATGGATATCAACTATGTTGACTACAAGTTCTACAATCAAACTATATCCTCAAAGGATGAGTTTGATGATCTCTCTACAATCAACTAA

Protein sequence

>Msa0244070

MSDHSHNINAVLRPTIFREYIGVKDDPETLDDFPVNIINDDVNQFHFILGFATEVYKDGKGTGHFVRDWNFDYFSPEKVMITIGGHGTKYPFNPKEKKVWIFNAISSIRHIIQDYENYLVNDDSGSCHCTSIIDGIDINYEYIDSSVTGADFSNCIGQKDKHVSKSMEYVSIAPTELLQAHYHKLFWDHKMDINYVDYKFYNQTISSKDEFDDLYNQLITDYGVSTDPADTKMNREVFIEGVTRLINSKSLLGLFDDPETLDDFPVNIINDDVNQFHFILGFATEVYKDGKGTGHFVRDWNFDYFSPEKVFKHKKEHKNMKVMITIGGHGTKYPFNPKEKKVWIFNAISSIRHIIQDYENYLVNDDSGSCHCTSIIDGIDINYEYIDSSVTGADFSNCIGQVIKHLKKDKHVSKSMEYVSIAPTELLQAHYHKLFWDHKMDINYVDYKFYNQTISSKDEFDDLSTIN*