Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0244020 | XP_013441887.1 | 79.923 | 259 | 24 | 4 | 1 | 233 | 23 | 279 | 1.69e-138 | 412 |
| Msa0244020 | XP_013441887.1 | 84.918 | 305 | 43 | 2 | 217 | 520 | 8 | 310 | 0.0 | 531 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0244020 | sp|Q7M443|CHIT2_TULSB | 33.333 | 282 | 152 | 10 | 247 | 519 | 21 | 275 | 3.36e-30 | 122 |
| Msa0244020 | sp|Q7M443|CHIT2_TULSB | 28.629 | 248 | 128 | 10 | 16 | 233 | 21 | 249 | 4.82e-14 | 75.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0244020 | A0A072TEX8 | 79.923 | 259 | 24 | 4 | 1 | 233 | 23 | 279 | 8.07e-139 | 412 |
| Msa0244020 | A0A072TEX8 | 84.918 | 305 | 43 | 2 | 217 | 520 | 8 | 310 | 0.0 | 531 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0201430 | Msa0244020 | 0.906243 | 1.827675e-80 | -8.615850e-47 |
| Msa0201440 | Msa0244020 | 0.912505 | 1.803947e-83 | -8.615850e-47 |
| Msa0201450 | Msa0244020 | 0.904386 | 1.296105e-79 | -8.615850e-47 |
| Msa0201460 | Msa0244020 | 0.909202 | 7.389263e-82 | -8.615850e-47 |
| Msa0201470 | Msa0244020 | 0.873784 | 1.123834e-67 | -8.615850e-47 |
| Msa0244020 | Msa0244030 | 0.947651 | 4.444629e-106 | -8.615850e-47 |
| Msa0244020 | Msa0244040 | 0.954370 | 3.447048e-112 | -8.615850e-47 |
| Msa0244020 | Msa0244050 | 0.833305 | 5.754971e-56 | -8.615850e-47 |
| Msa0244020 | Msa0244060 | 0.952797 | 1.113619e-110 | -8.615850e-47 |
| Msa0244020 | Msa0244070 | 0.949193 | 2.086948e-107 | -8.615850e-47 |
| Msa0244020 | Msa0244080 | 0.919177 | 6.237005e-87 | -8.615850e-47 |
| Msa0244020 | Msa0282910 | 0.894187 | 3.122964e-75 | -8.615850e-47 |
| Msa0244020 | Msa0282920 | 0.927954 | 5.708866e-92 | -8.615850e-47 |
| Msa0244020 | Msa0282930 | 0.863941 | 1.736781e-64 | -8.615850e-47 |
| Msa0244020 | Msa1040330 | 0.802189 | 6.312466e-49 | -8.615850e-47 |
| Msa0244020 | Msa1191270 | 0.800812 | 1.209040e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0244020 | MtrunA17_Chr2g0303381 | 84.918 | 305 | 43 | 2 | 217 | 520 | 8 | 310 | 0.0 | 531 |
| Msa0244020 | MtrunA17_Chr2g0303381 | 79.923 | 259 | 24 | 4 | 1 | 233 | 23 | 279 | 1.55e-142 | 412 |
| Msa0244020 | MtrunA17_Chr2g0303401 | 84.918 | 305 | 43 | 2 | 217 | 520 | 8 | 310 | 0.0 | 531 |
| Msa0244020 | MtrunA17_Chr2g0303401 | 79.923 | 259 | 24 | 4 | 1 | 233 | 23 | 279 | 1.55e-142 | 412 |
| Msa0244020 | MtrunA17_Chr8g0350531 | 44.007 | 559 | 247 | 10 | 5 | 519 | 27 | 563 | 1.18e-142 | 422 |
| Msa0244020 | MtrunA17_Chr8g0350531 | 44.369 | 293 | 132 | 5 | 227 | 513 | 18 | 285 | 1.12e-66 | 225 |
| Msa0244020 | MtrunA17_Chr2g0297811 | 54.870 | 308 | 130 | 6 | 217 | 520 | 7 | 309 | 3.52e-96 | 294 |
| Msa0244020 | MtrunA17_Chr2g0297811 | 51.737 | 259 | 97 | 7 | 1 | 233 | 22 | 278 | 9.07e-65 | 213 |
| Msa0244020 | MtrunA17_Chr2g0297801 | 54.870 | 308 | 130 | 6 | 217 | 520 | 7 | 309 | 3.52e-96 | 294 |
| Msa0244020 | MtrunA17_Chr2g0297801 | 51.737 | 259 | 97 | 7 | 1 | 233 | 22 | 278 | 9.07e-65 | 213 |
| Msa0244020 | MtrunA17_Chr2g0297791 | 54.870 | 308 | 130 | 6 | 217 | 520 | 7 | 309 | 3.52e-96 | 294 |
| Msa0244020 | MtrunA17_Chr2g0297791 | 51.737 | 259 | 97 | 7 | 1 | 233 | 22 | 278 | 9.07e-65 | 213 |
| Msa0244020 | MtrunA17_Chr2g0297731 | 45.875 | 303 | 141 | 7 | 227 | 517 | 6 | 297 | 1.00e-81 | 256 |
| Msa0244020 | MtrunA17_Chr2g0297731 | 42.586 | 263 | 107 | 9 | 6 | 233 | 16 | 269 | 3.33e-54 | 184 |
| Msa0244020 | MtrunA17_Chr8g0350511 | 46.622 | 296 | 141 | 4 | 227 | 519 | 18 | 299 | 2.13e-80 | 253 |
| Msa0244020 | MtrunA17_Chr8g0350511 | 43.478 | 253 | 111 | 5 | 5 | 233 | 27 | 271 | 4.24e-56 | 189 |
| Msa0244020 | MtrunA17_Chr8g0350521 | 46.622 | 296 | 141 | 4 | 227 | 519 | 18 | 299 | 2.13e-80 | 253 |
| Msa0244020 | MtrunA17_Chr8g0350521 | 43.478 | 253 | 111 | 5 | 5 | 233 | 27 | 271 | 4.24e-56 | 189 |
| Msa0244020 | MtrunA17_Chr8g0350541 | 46.622 | 296 | 141 | 4 | 227 | 519 | 18 | 299 | 2.13e-80 | 253 |
| Msa0244020 | MtrunA17_Chr8g0350541 | 43.478 | 253 | 111 | 5 | 5 | 233 | 27 | 271 | 4.24e-56 | 189 |
| Msa0244020 | MtrunA17_Chr8g0350501 | 46.622 | 296 | 141 | 4 | 227 | 519 | 18 | 299 | 2.13e-80 | 253 |
| Msa0244020 | MtrunA17_Chr8g0350501 | 43.478 | 253 | 111 | 5 | 5 | 233 | 27 | 271 | 4.24e-56 | 189 |
| Msa0244020 | MtrunA17_Chr8g0350551 | 43.581 | 296 | 136 | 4 | 227 | 519 | 18 | 285 | 8.50e-71 | 228 |
| Msa0244020 | MtrunA17_Chr8g0350551 | 41.036 | 251 | 106 | 6 | 5 | 233 | 27 | 257 | 5.30e-46 | 162 |
| Msa0244020 | MtrunA17_Chr2g0297761 | 46.048 | 291 | 132 | 10 | 239 | 517 | 18 | 295 | 6.28e-70 | 226 |
| Msa0244020 | MtrunA17_Chr2g0297761 | 43.295 | 261 | 102 | 12 | 8 | 233 | 18 | 267 | 1.82e-48 | 169 |
| Msa0244020 | MtrunA17_Chr2g0297771 | 46.048 | 291 | 132 | 10 | 239 | 517 | 18 | 295 | 6.28e-70 | 226 |
| Msa0244020 | MtrunA17_Chr2g0297771 | 43.295 | 261 | 102 | 12 | 8 | 233 | 18 | 267 | 1.82e-48 | 169 |
| Msa0244020 | MtrunA17_Chr2g0297781 | 46.048 | 291 | 132 | 10 | 239 | 517 | 18 | 295 | 6.28e-70 | 226 |
| Msa0244020 | MtrunA17_Chr2g0297781 | 43.295 | 261 | 102 | 12 | 8 | 233 | 18 | 267 | 1.82e-48 | 169 |
| Msa0244020 | MtrunA17_Chr8g0350441 | 40.476 | 294 | 154 | 7 | 227 | 518 | 17 | 291 | 2.59e-64 | 211 |
| Msa0244020 | MtrunA17_Chr8g0350441 | 38.889 | 252 | 120 | 8 | 5 | 233 | 26 | 266 | 2.86e-44 | 158 |
| Msa0244020 | MtrunA17_Chr8g0350431 | 40.690 | 290 | 151 | 7 | 227 | 514 | 17 | 287 | 2.11e-61 | 203 |
| Msa0244020 | MtrunA17_Chr8g0350431 | 38.492 | 252 | 121 | 8 | 5 | 233 | 26 | 266 | 1.24e-41 | 151 |
| Msa0244020 | MtrunA17_Chr8g0350421 | 40.690 | 290 | 151 | 7 | 227 | 514 | 17 | 287 | 2.11e-61 | 203 |
| Msa0244020 | MtrunA17_Chr8g0350421 | 38.492 | 252 | 121 | 8 | 5 | 233 | 26 | 266 | 1.24e-41 | 151 |
| Msa0244020 | MtrunA17_Chr8g0350411 | 40.690 | 290 | 151 | 7 | 227 | 514 | 17 | 287 | 2.11e-61 | 203 |
| Msa0244020 | MtrunA17_Chr8g0350411 | 38.492 | 252 | 121 | 8 | 5 | 233 | 26 | 266 | 1.24e-41 | 151 |
| Msa0244020 | MtrunA17_Chr8g0350451 | 40.925 | 281 | 131 | 7 | 242 | 520 | 31 | 278 | 2.46e-53 | 181 |
| Msa0244020 | MtrunA17_Chr8g0350451 | 38.618 | 246 | 112 | 8 | 11 | 233 | 31 | 260 | 2.13e-37 | 139 |
| Msa0244020 | MtrunA17_Chr8g0350461 | 40.925 | 281 | 131 | 7 | 242 | 520 | 31 | 278 | 2.46e-53 | 181 |
| Msa0244020 | MtrunA17_Chr8g0350461 | 38.618 | 246 | 112 | 8 | 11 | 233 | 31 | 260 | 2.13e-37 | 139 |
| Msa0244020 | MtrunA17_Chr8g0350471 | 40.925 | 281 | 131 | 7 | 242 | 520 | 31 | 278 | 2.46e-53 | 181 |
| Msa0244020 | MtrunA17_Chr8g0350471 | 38.618 | 246 | 112 | 8 | 11 | 233 | 31 | 260 | 2.13e-37 | 139 |
| Msa0244020 | MtrunA17_Chr6g0481561 | 30.137 | 292 | 164 | 10 | 219 | 496 | 23 | 288 | 1.68e-26 | 109 |
| Msa0244020 | MtrunA17_Chr6g0481561 | 26.210 | 248 | 134 | 10 | 16 | 233 | 53 | 281 | 3.42e-11 | 64.3 |
| Msa0244020 | MtrunA17_Chr2g0327611 | 31.301 | 246 | 144 | 9 | 251 | 488 | 49 | 277 | 2.88e-26 | 108 |
| Msa0244020 | MtrunA17_Chr2g0327611 | 29.353 | 201 | 109 | 7 | 20 | 200 | 49 | 236 | 8.14e-17 | 81.3 |
| Msa0244020 | MtrunA17_Chr2g0327601 | 31.923 | 260 | 143 | 9 | 247 | 496 | 50 | 285 | 4.69e-24 | 102 |
| Msa0244020 | MtrunA17_Chr2g0327601 | 28.175 | 252 | 124 | 12 | 16 | 233 | 50 | 278 | 9.02e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 112 sgRNAs with CRISPR-Local
Find 479 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAAAATCATCTAAAGTTTC+TGG | 0.145221 | 2_2:+21943422 | None:intergenic |
| GGAAAATCATCTAAAGTTTC+TGG | 0.145221 | 2_2:+21948342 | None:intergenic |
| AATCAATTCCACTTCATTCT+AGG | 0.205618 | 2_2:-21943374 | Msa0244020:CDS |
| AATCAATTCCACTTCATTCT+AGG | 0.205618 | 2_2:-21948294 | Msa0244020:CDS |
| CCCACTACCACAAATTGTTT+TGG | 0.245343 | 2_2:-21942908 | Msa0244020:CDS |
| CCCACTACCACAAATTGTTT+TGG | 0.245343 | 2_2:-21947828 | Msa0244020:CDS |
| TGTAGCTAGTAATCAATTAT+TGG | 0.249179 | 2_2:+21942575 | None:intergenic |
| ATTCAATCCTAAGGAGAAAA+AGG | 0.297710 | 2_2:-21943192 | Msa0244020:CDS |
| ATTCAATCCTAAGGAGAAAA+AGG | 0.297710 | 2_2:-21948112 | Msa0244020:CDS |
| GGACACATATTCCATGGATT+TGG | 0.302531 | 2_2:+21942956 | None:intergenic |
| GGACACATATTCCATGGATT+TGG | 0.302531 | 2_2:+21947876 | None:intergenic |
| TTACGGTGAGCTTAAACTTT+TGG | 0.347612 | 2_2:-21942784 | Msa0244020:CDS |
| GATATGTCTGATCGAGCTTA+TGG | 0.361529 | 2_2:+21943154 | None:intergenic |
| GATATGTCTGATCGAGCTTA+TGG | 0.361529 | 2_2:+21948074 | None:intergenic |
| CCCAAAACAATTTGTGGTAG+TGG | 0.365132 | 2_2:+21942907 | None:intergenic |
| CCCAAAACAATTTGTGGTAG+TGG | 0.365132 | 2_2:+21947827 | None:intergenic |
| TACCTTGTCAATGATGATTC+TGG | 0.380807 | 2_2:-21943113 | Msa0244020:CDS |
| TACCTTGTCAATGATGATTC+TGG | 0.380807 | 2_2:-21948033 | Msa0244020:CDS |
| CGGGACATTTCGTTCGCGAT+TGG | 0.385507 | 2_2:-21943316 | Msa0244020:CDS |
| CGGGACATTTCGTTCGCGAT+TGG | 0.385507 | 2_2:-21948236 | Msa0244020:CDS |
| TCATCATTGATGATATTAAC+AGG | 0.403312 | 2_2:+21943401 | None:intergenic |
| ACAATTTGTGGTAGTGGGCT+TGG | 0.408360 | 2_2:+21942913 | None:intergenic |
| ACAATTTGTGGTAGTGGGCT+TGG | 0.408360 | 2_2:+21947833 | None:intergenic |
| CACTGCACTAGCATAATTGA+TGG | 0.434540 | 2_2:-21943083 | Msa0244020:CDS |
| CACTGCACTAGCATAATTGA+TGG | 0.434540 | 2_2:-21948003 | Msa0244020:CDS |
| AATCAACTAATAACGGATTA+CGG | 0.451454 | 2_2:-21942801 | Msa0244020:CDS |
| AATCAACTAATAACGGATTA+CGG | 0.451454 | 2_2:-21947721 | Msa0244020:intron |
| ATCATCAAACTCATCCTTTG+AGG | 0.453286 | 2_2:+21942830 | None:intergenic |
| ATCATCAAACTCATCCTTTG+AGG | 0.453286 | 2_2:+21947750 | None:intergenic |
| CGGTTCATCTTAGTATCAGC+TGG | 0.454457 | 2_2:+21942744 | None:intergenic |
| CGGTTCATCTTAGTATCAGC+TGG | 0.454457 | 2_2:+21947664 | None:intergenic |
| GAAAATCATCTAAAGTTTCT+GGG | 0.456174 | 2_2:+21943423 | None:intergenic |
| GAAAATCATCTAAAGTTTCT+GGG | 0.456174 | 2_2:+21948343 | None:intergenic |
| TCATCATTGATGATCTCAAC+AGG | 0.457912 | 2_2:+21948321 | None:intergenic |
| AGCATTTCCTCCAAGATGTA+AGG | 0.467593 | 2_2:+21942612 | None:intergenic |
| TGTGGTCCCAAAACAATTTG+TGG | 0.468651 | 2_2:+21942901 | None:intergenic |
| TGTGGTCCCAAAACAATTTG+TGG | 0.468651 | 2_2:+21947821 | None:intergenic |
| GATGTCATTGCTCGGTGGGT+TGG | 0.481116 | 2_2:+21942638 | None:intergenic |
| TATATCGATTCTAGTGTGAC+TGG | 0.486159 | 2_2:-21943041 | Msa0244020:CDS |
| TATATCGATTCTAGTGTGAC+TGG | 0.486159 | 2_2:-21947961 | Msa0244020:CDS |
| GCCACTGAGGTGTATAAAGA+TGG | 0.489071 | 2_2:-21943347 | Msa0244020:CDS |
| GCCACTGAGGTGTATAAAGA+TGG | 0.489071 | 2_2:-21948267 | Msa0244020:CDS |
| AACCGAGAGGTGTTCATTGA+GGG | 0.499384 | 2_2:-21942726 | Msa0244020:CDS |
| AACCGAGAGGTGTTCATTGA+GGG | 0.499384 | 2_2:-21947646 | Msa0244020:CDS |
| CGCCCTCAATGAACACCTCT+CGG | 0.504404 | 2_2:+21942724 | None:intergenic |
| CGCCCTCAATGAACACCTCT+CGG | 0.504404 | 2_2:+21947644 | None:intergenic |
| TGACATCGAGCCTTACATCT+TGG | 0.507062 | 2_2:-21942622 | Msa0244020:CDS |
| TCTCTACAATCAACTAATAA+CGG | 0.510522 | 2_2:-21942808 | Msa0244020:CDS |
| TCTCTACAATCAACTAATAA+CGG | 0.510522 | 2_2:-21947728 | Msa0244020:CDS |
| CCAAAACAATTTGTGGTAGT+GGG | 0.514829 | 2_2:+21942908 | None:intergenic |
| CCAAAACAATTTGTGGTAGT+GGG | 0.514829 | 2_2:+21947828 | None:intergenic |
| TATAAAGATGGAAAAGGAAC+GGG | 0.518546 | 2_2:-21943335 | Msa0244020:CDS |
| TATAAAGATGGAAAAGGAAC+GGG | 0.518546 | 2_2:-21948255 | Msa0244020:CDS |
| CTAGTAATCAATTATTGGTA+AGG | 0.518596 | 2_2:+21942580 | None:intergenic |
| ATCAACAGCAAATCACTCCT+TGG | 0.519679 | 2_2:-21942690 | Msa0244020:CDS |
| ATCAACAGCAAATCACTCCT+TGG | 0.519679 | 2_2:-21947610 | Msa0244020:CDS |
| TAAATATCCATTCAATCCTA+AGG | 0.520789 | 2_2:-21943201 | Msa0244020:CDS |
| TAAATATCCATTCAATCCTA+AGG | 0.520789 | 2_2:-21948121 | Msa0244020:CDS |
| GCTGACTTCTCCAACTGCAT+TGG | 0.521072 | 2_2:-21943017 | Msa0244020:CDS |
| GCTGACTTCTCCAACTGCAT+TGG | 0.521072 | 2_2:-21947937 | Msa0244020:CDS |
| AATAACTTGTCCAATGCAGT+TGG | 0.521593 | 2_2:+21943007 | None:intergenic |
| AATAACTTGTCCAATGCAGT+TGG | 0.521593 | 2_2:+21947927 | None:intergenic |
| ATTTGTGGTAGTGGGCTTGG+AGG | 0.527426 | 2_2:+21942916 | None:intergenic |
| ATTTGTGGTAGTGGGCTTGG+AGG | 0.527426 | 2_2:+21947836 | None:intergenic |
| GCTCGATGTCATTGCTCGGT+GGG | 0.532171 | 2_2:+21942634 | None:intergenic |
| GAGGAGCTCTGTCGGAGCAA+TGG | 0.538177 | 2_2:+21942935 | None:intergenic |
| GAGGAGCTCTGTCGGAGCAA+TGG | 0.538177 | 2_2:+21947855 | None:intergenic |
| ATGAAGGTTATGATAACTAT+CGG | 0.552996 | 2_2:-21943236 | Msa0244020:CDS |
| ATGAAGGTTATGATAACTAT+CGG | 0.552996 | 2_2:-21948156 | Msa0244020:intron |
| CATCGAGCCTTACATCTTGG+AGG | 0.554478 | 2_2:-21942619 | Msa0244020:CDS |
| TAAGCATGTATCCAAATCCA+TGG | 0.557313 | 2_2:-21942967 | Msa0244020:CDS |
| TAAGCATGTATCCAAATCCA+TGG | 0.557313 | 2_2:-21947887 | Msa0244020:CDS |
| CATCTTAGTATCAGCTGGAT+CGG | 0.557541 | 2_2:+21942749 | None:intergenic |
| CATCTTAGTATCAGCTGGAT+CGG | 0.557541 | 2_2:+21947669 | None:intergenic |
| TGAATGGATATTTAGTGCCA+TGG | 0.560003 | 2_2:+21943210 | None:intergenic |
| TGAATGGATATTTAGTGCCA+TGG | 0.560003 | 2_2:+21948130 | None:intergenic |
| GAGGTGTATAAAGATGGAAA+AGG | 0.564302 | 2_2:-21943341 | Msa0244020:CDS |
| GAGGTGTATAAAGATGGAAA+AGG | 0.564302 | 2_2:-21948261 | Msa0244020:CDS |
| GAACCGAGAGGTGTTCATTG+AGG | 0.566347 | 2_2:-21942727 | Msa0244020:CDS |
| GAACCGAGAGGTGTTCATTG+AGG | 0.566347 | 2_2:-21947647 | Msa0244020:CDS |
| CAATCAAACTATATCCTCAA+AGG | 0.567378 | 2_2:-21942844 | Msa0244020:CDS |
| CAATCAAACTATATCCTCAA+AGG | 0.567378 | 2_2:-21947764 | Msa0244020:CDS |
| AGCAATGGACACATATTCCA+TGG | 0.567858 | 2_2:+21942950 | None:intergenic |
| AGCAATGGACACATATTCCA+TGG | 0.567858 | 2_2:+21947870 | None:intergenic |
| GAAAGAACACAAGAATATGA+AGG | 0.568930 | 2_2:-21943252 | Msa0244020:CDS |
| GGCTCGATGTCATTGCTCGG+TGG | 0.574776 | 2_2:+21942633 | None:intergenic |
| ATATCGATTCTAGTGTGACT+GGG | 0.576037 | 2_2:-21943040 | Msa0244020:CDS |
| ATATCGATTCTAGTGTGACT+GGG | 0.576037 | 2_2:-21947960 | Msa0244020:CDS |
| TGGGCTTGGAGGAGCTCTGT+CGG | 0.577415 | 2_2:+21942927 | None:intergenic |
| TGGGCTTGGAGGAGCTCTGT+CGG | 0.577415 | 2_2:+21947847 | None:intergenic |
| ATGATAACTATCGGAGGCCA+TGG | 0.579102 | 2_2:-21943227 | Msa0244020:CDS |
| ATGATAACTATCGGAGGCCA+TGG | 0.579102 | 2_2:-21948147 | Msa0244020:CDS |
| TAAGGCTCGATGTCATTGCT+CGG | 0.600452 | 2_2:+21942630 | None:intergenic |
| AGTTATTAAACATCTCAAGA+AGG | 0.601516 | 2_2:-21942991 | Msa0244020:CDS |
| GTATAAAGATGGAAAAGGAA+CGG | 0.613441 | 2_2:-21943336 | Msa0244020:CDS |
| GTATAAAGATGGAAAAGGAA+CGG | 0.613441 | 2_2:-21948256 | Msa0244020:CDS |
| TGGCGAAGCCTAGAATGAAG+TGG | 0.614487 | 2_2:+21943366 | None:intergenic |
| TGGCGAAGCCTAGAATGAAG+TGG | 0.614487 | 2_2:+21948286 | None:intergenic |
| TACCAGAATCATCATTGACA+AGG | 0.665409 | 2_2:+21943111 | None:intergenic |
| TACCAGAATCATCATTGACA+AGG | 0.665409 | 2_2:+21948031 | None:intergenic |
| TCCATCTTTATACACCTCAG+TGG | 0.670679 | 2_2:+21943346 | None:intergenic |
| TCCATCTTTATACACCTCAG+TGG | 0.670679 | 2_2:+21948266 | None:intergenic |
| CATCAATTATGCTAGTGCAG+TGG | 0.677859 | 2_2:+21943084 | None:intergenic |
| CATCAATTATGCTAGTGCAG+TGG | 0.677859 | 2_2:+21948004 | None:intergenic |
| CATTCTAGGCTTCGCCACTG+AGG | 0.701525 | 2_2:-21943360 | Msa0244020:CDS |
| CATTCTAGGCTTCGCCACTG+AGG | 0.701525 | 2_2:-21948280 | Msa0244020:CDS |
| AAGGTTATGATAACTATCGG+AGG | 0.701816 | 2_2:-21943233 | Msa0244020:CDS |
| AAGGTTATGATAACTATCGG+AGG | 0.701816 | 2_2:-21948153 | Msa0244020:CDS |
| TATCGATTCTAGTGTGACTG+GGG | 0.708158 | 2_2:-21943039 | Msa0244020:CDS |
| TATCGATTCTAGTGTGACTG+GGG | 0.708158 | 2_2:-21947959 | Msa0244020:CDS |
| TGATACTAAGATGAACCGAG+AGG | 0.777827 | 2_2:-21942739 | Msa0244020:CDS |
| TGATACTAAGATGAACCGAG+AGG | 0.777827 | 2_2:-21947659 | Msa0244020:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTATGAAATTTTGATT+TGG | + | chr2_2:21944666-21944685 | None:intergenic | 10.0% |
| !! | TTAATTAAAATACCAATAAT+AGG | - | chr2_2:21945039-21945058 | Msa0244020:intron | 10.0% |
| !!! | TTAATATTTTATTTTTCGAT+CGG | - | chr2_2:21946276-21946295 | Msa0244020:intron | 10.0% |
| !!! | TTTTTTATGAAATTTTGATT+TGG | + | chr2_2:21944666-21944685 | None:intergenic | 10.0% |
| !! | TTAATTAAAATACCAATAAT+AGG | - | chr2_2:21945039-21945058 | Msa0244020:intron | 10.0% |
| !! | ATTATCTAGTCAATATATTT+AGG | - | chr2_2:21943008-21943027 | Msa0244020:CDS | 15.0% |
| !!! | TTTTGGATTCATATTTTTTT+TGG | - | chr2_2:21943060-21943079 | Msa0244020:CDS | 15.0% |
| !! | TTATTTAAGAAAGAAAATAG+AGG | - | chr2_2:21943540-21943559 | Msa0244020:intron | 15.0% |
| !! | TGTTAAATAATGTTCTTTAT+TGG | + | chr2_2:21943663-21943682 | None:intergenic | 15.0% |
| !!! | TTTTTACTATACTAAAGAAA+AGG | + | chr2_2:21943783-21943802 | None:intergenic | 15.0% |
| !! | AAAAATTATAATCAATTGGA+AGG | + | chr2_2:21943808-21943827 | None:intergenic | 15.0% |
| !! | AGCAAAAAATTATAATCAAT+TGG | + | chr2_2:21943812-21943831 | None:intergenic | 15.0% |
| !! | ACAAAAAAAAAACACAATAA+CGG | + | chr2_2:21944197-21944216 | None:intergenic | 15.0% |
| !! | TATAGATAAAAATTTAGAGA+CGG | + | chr2_2:21944232-21944251 | None:intergenic | 15.0% |
| !! | TTATTTGTATTCAAAATTGA+GGG | + | chr2_2:21944317-21944336 | None:intergenic | 15.0% |
| !! | TAACGTTTGAAAATTATTAA+CGG | + | chr2_2:21944693-21944712 | None:intergenic | 15.0% |
| !! | ATTCTATTAAATCAAGTATT+TGG | + | chr2_2:21945003-21945022 | None:intergenic | 15.0% |
| !!! | TAATATTTTATTTTTCGATC+GGG | - | chr2_2:21946277-21946296 | Msa0244020:intron | 15.0% |
| !!! | GTTAATTATTTTTATCACTA+AGG | + | chr2_2:21946622-21946641 | None:intergenic | 15.0% |
| !! | ATATAAATCTATTAGTGAAT+CGG | + | chr2_2:21946678-21946697 | None:intergenic | 15.0% |
| !! | AAAAATCATTATAGGAATTA+GGG | + | chr2_2:21946711-21946730 | None:intergenic | 15.0% |
| !! | AAAAACAGAAAAATCATTAT+AGG | + | chr2_2:21946719-21946738 | None:intergenic | 15.0% |
| !! | CTAAATTTAAATCATATTAG+AGG | + | chr2_2:21947309-21947328 | None:intergenic | 15.0% |
| !! | CTCTAATATGATTTAAATTT+AGG | - | chr2_2:21947307-21947326 | Msa0244020:intron | 15.0% |
| !!! | TGTCAAATAATGTTTTTTAT+TGG | + | chr2_2:21948579-21948598 | None:intergenic | 15.0% |
| !!! | TTTTTACTATACTAAAGAAA+AGG | + | chr2_2:21943783-21943802 | None:intergenic | 15.0% |
| !! | AAAAATTATAATCAATTGGA+AGG | + | chr2_2:21943808-21943827 | None:intergenic | 15.0% |
| !! | AGCAAAAAATTATAATCAAT+TGG | + | chr2_2:21943812-21943831 | None:intergenic | 15.0% |
| !!! | TTTTTATGAGTTTATGTTTT+AGG | + | chr2_2:21948989-21949008 | None:intergenic | 15.0% |
| !! | TACAAAAAAAAACACAATAA+CGG | + | chr2_2:21949112-21949131 | None:intergenic | 15.0% |
| !! | TTATTTGTATTCAAAATTGA+GGG | + | chr2_2:21944317-21944336 | None:intergenic | 15.0% |
| !!! | TTACACTTTTTAAATGATAA+AGG | + | chr2_2:21944448-21944467 | None:intergenic | 15.0% |
| !! | TAACGTTTGAAAATTATTAA+CGG | + | chr2_2:21944693-21944712 | None:intergenic | 15.0% |
| !! | ATTCTATTAAATCAAGTATT+TGG | + | chr2_2:21945003-21945022 | None:intergenic | 15.0% |
| !! | TTTAATAATAGTTGTGATGA+TGG | - | chr2_2:21942694-21942713 | Msa0244020:CDS | 20.0% |
| !!! | AACTTTTTATGTTCACATTA+TGG | + | chr2_2:21942922-21942941 | None:intergenic | 20.0% |
| !! | CATAAAAAGTTCTTAATGAA+AGG | - | chr2_2:21942931-21942950 | Msa0244020:CDS | 20.0% |
| !! | AAATTACAAGTTCCATAAAA+AGG | - | chr2_2:21943400-21943419 | Msa0244020:CDS | 20.0% |
| !! | TTTGCTAAAAATATATAGAG+TGG | - | chr2_2:21943826-21943845 | Msa0244020:intron | 20.0% |
| !! | ATAATTCTAAATTGGAAATG+GGG | + | chr2_2:21943862-21943881 | None:intergenic | 20.0% |
| !! | CATAATTCTAAATTGGAAAT+GGG | + | chr2_2:21943863-21943882 | None:intergenic | 20.0% |
| !! | ACATAATTCTAAATTGGAAA+TGG | + | chr2_2:21943864-21943883 | None:intergenic | 20.0% |
| !!! | TTTTTACGAGTTTATGTTTT+AGG | + | chr2_2:21944070-21944089 | None:intergenic | 20.0% |
| !!! | AATATGTCATTTCTAAAATC+AGG | - | chr2_2:21944131-21944150 | Msa0244020:intron | 20.0% |
| !! | GTTATTTGTATTCAAAATTG+AGG | + | chr2_2:21944318-21944337 | None:intergenic | 20.0% |
| !! | TTATAGAAAAGGTTGTTTAA+GGG | + | chr2_2:21944521-21944540 | None:intergenic | 20.0% |
| !! | ATTATAGAAAAGGTTGTTTA+AGG | + | chr2_2:21944522-21944541 | None:intergenic | 20.0% |
| !! | AACGATCTTTATTATAGAAA+AGG | + | chr2_2:21944532-21944551 | None:intergenic | 20.0% |
| !!! | AATTTTTATTAGGAACACTA+GGG | + | chr2_2:21945079-21945098 | None:intergenic | 20.0% |
| !!! | TAATTTTTATTAGGAACACT+AGG | + | chr2_2:21945080-21945099 | None:intergenic | 20.0% |
| !!! | ACTTATTAATTGATTTTCGT+TGG | + | chr2_2:21945234-21945253 | None:intergenic | 20.0% |
| !! | GAAAATGAAAATATGGAAAA+TGG | + | chr2_2:21945287-21945306 | None:intergenic | 20.0% |
| !!! | TAAGAATTAGTTTTTTCACT+CGG | + | chr2_2:21946486-21946505 | None:intergenic | 20.0% |
| !!! | ATTTTTATCACTAAGGTTTT+CGG | + | chr2_2:21946615-21946634 | None:intergenic | 20.0% |
| !! | TATAAATCTATTAGTGAATC+GGG | + | chr2_2:21946677-21946696 | None:intergenic | 20.0% |
| !! | AAAATCATTATAGGAATTAG+GGG | + | chr2_2:21946710-21946729 | None:intergenic | 20.0% |
| !! | GAAAAATCATTATAGGAATT+AGG | + | chr2_2:21946712-21946731 | None:intergenic | 20.0% |
| !!! | AATAATTTTTTTTTTAGGCC+TGG | - | chr2_2:21947270-21947289 | Msa0244020:intron | 20.0% |
| !! | ATAAATCTAAAAAAACCTAC+CGG | + | chr2_2:21947334-21947353 | None:intergenic | 20.0% |
| !! | TTTAATAATAGTTGTGATGA+TGG | - | chr2_2:21942694-21942713 | Msa0244020:CDS | 20.0% |
| !!! | AACTTTTTATGTTCACATTA+TGG | + | chr2_2:21942922-21942941 | None:intergenic | 20.0% |
| !! | CATAAAAAGTTCTTAATGAA+AGG | - | chr2_2:21942931-21942950 | Msa0244020:CDS | 20.0% |
| !! | ATTATCTAGTCAATATACTT+AGG | - | chr2_2:21947925-21947944 | Msa0244020:intron | 20.0% |
| !! | AACAAAATGTAAATCTACTT+AGG | - | chr2_2:21948291-21948310 | Msa0244020:CDS | 20.0% |
| !! | AAATTACAAGTTCCATAAAA+AGG | - | chr2_2:21943400-21943419 | Msa0244020:CDS | 20.0% |
| !! | TTATTTAAGAAAGAAAGTAG+CGG | - | chr2_2:21948456-21948475 | Msa0244020:intron | 20.0% |
| !! | TTTGCTAAAAATATATAGAG+TGG | - | chr2_2:21943826-21943845 | Msa0244020:intron | 20.0% |
| !! | ATAATTCTAAATTGGAAAAG+GGG | + | chr2_2:21948782-21948801 | None:intergenic | 20.0% |
| !! | CATAATTCTAAATTGGAAAA+GGG | + | chr2_2:21948783-21948802 | None:intergenic | 20.0% |
| !! | ACATAATTCTAAATTGGAAA+AGG | + | chr2_2:21943864-21943883 | None:intergenic | 20.0% |
| !! | TGCATAACATAATTCTAAAT+TGG | + | chr2_2:21948790-21948809 | None:intergenic | 20.0% |
| !!! | AATATGTCATTTCTAAAATC+AGG | - | chr2_2:21944131-21944150 | Msa0244020:intron | 20.0% |
| !! | GTTATTTGTATTCAAAATTG+AGG | + | chr2_2:21944318-21944337 | None:intergenic | 20.0% |
| !! | TTATAGAAAAGGTTGTTTAA+GGG | + | chr2_2:21944521-21944540 | None:intergenic | 20.0% |
| !! | ATTATAGAAAAGGTTGTTTA+AGG | + | chr2_2:21944522-21944541 | None:intergenic | 20.0% |
| !! | AACGATCTTTATTATAGAAA+AGG | + | chr2_2:21944532-21944551 | None:intergenic | 20.0% |
| !!! | AATTTTTATTAGGAACACTA+GGG | + | chr2_2:21945079-21945098 | None:intergenic | 20.0% |
| !!! | TAATTTTTATTAGGAACACT+AGG | + | chr2_2:21945080-21945099 | None:intergenic | 20.0% |
| !!! | ACTTATTAATTGATTTTCGT+TGG | + | chr2_2:21945234-21945253 | None:intergenic | 20.0% |
| !! | GAAAATGAAAATATGGAAAA+TGG | + | chr2_2:21945287-21945306 | None:intergenic | 20.0% |
| ! | TGTTTGAGGAAAAAAAAGAT+TGG | + | chr2_2:21942805-21942824 | None:intergenic | 25.0% |
| ! | AACAAAATGTCAATCTACTT+AGG | - | chr2_2:21943375-21943394 | Msa0244020:CDS | 25.0% |
| !! | GTTCCATAAAAAGGTATAAT+TGG | - | chr2_2:21943409-21943428 | Msa0244020:CDS | 25.0% |
| !! | AATGCATTGATCATTTCTTT+AGG | + | chr2_2:21943471-21943490 | None:intergenic | 25.0% |
| ! | AATGATCAATGCATTTGAAA+AGG | - | chr2_2:21943476-21943495 | Msa0244020:intron | 25.0% |
| ! | CGCATAACATAATTCTAAAT+TGG | + | chr2_2:21943870-21943889 | None:intergenic | 25.0% |
| ! | TACTCATTATATTCACACTA+TGG | + | chr2_2:21943924-21943943 | None:intergenic | 25.0% |
| !!! | TTCAAAATTGAGGGTATTTT+TGG | + | chr2_2:21944308-21944327 | None:intergenic | 25.0% |
| ! | TCTATAATAAAGATCGTTGT+TGG | - | chr2_2:21944534-21944553 | Msa0244020:intron | 25.0% |
| ! | TAATAAAAAAAGCGGAAAGA+CGG | - | chr2_2:21944716-21944735 | Msa0244020:intron | 25.0% |
| ! | TTAAATCAAGTATTTGGTCA+AGG | + | chr2_2:21944997-21945016 | None:intergenic | 25.0% |
| !! | ATTTTTATTAGGAACACTAG+GGG | + | chr2_2:21945078-21945097 | None:intergenic | 25.0% |
| ! | CATTATTAAATTGAGTTTGC+AGG | - | chr2_2:21945153-21945172 | Msa0244020:intron | 25.0% |
| !!! | ATTAATTGATTTTCGTTGGT+GGG | + | chr2_2:21945230-21945249 | None:intergenic | 25.0% |
| !!! | TATTAATTGATTTTCGTTGG+TGG | + | chr2_2:21945231-21945250 | None:intergenic | 25.0% |
| ! | TGTGATCGAAAATGAAAATA+TGG | + | chr2_2:21945294-21945313 | None:intergenic | 25.0% |
| ! | ATGTATTCTCGAAAAATTGT+TGG | + | chr2_2:21945356-21945375 | None:intergenic | 25.0% |
| !!! | ACAATTTTTCGAGAATACAT+TGG | - | chr2_2:21945356-21945375 | Msa0244020:intron | 25.0% |
| !! | GAAAATCATCTAAAGTTTCT+GGG | + | chr2_2:21945394-21945413 | None:intergenic | 25.0% |
| ! | GAAAGAACATAAGAATATGA+AGG | - | chr2_2:21945562-21945581 | Msa0244020:intron | 25.0% |
| ! | ATGAAGGTTATGATAACTAT+CGG | - | chr2_2:21945578-21945597 | Msa0244020:intron | 25.0% |
| ! | TAAATATCCATTCAATCCTA+AGG | - | chr2_2:21945613-21945632 | Msa0244020:intron | 25.0% |
| ! | AGTTATTAAACATCTCAAGA+AGG | - | chr2_2:21945823-21945842 | Msa0244020:intron | 25.0% |
| ! | TCTCTACAATCAACTAATAA+CGG | - | chr2_2:21946006-21946025 | Msa0244020:intron | 25.0% |
| !!! | AATCAACTAATAACGGATTA+CGG | - | chr2_2:21946013-21946032 | Msa0244020:intron | 25.0% |
| ! | CTAGTAATCAATTATTGGTA+AGG | + | chr2_2:21946237-21946256 | None:intergenic | 25.0% |
| ! | TGTAGCTAGTAATCAATTAT+TGG | + | chr2_2:21946242-21946261 | None:intergenic | 25.0% |
| ! | ATGACTCTATTTAGATATAC+AGG | - | chr2_2:21946528-21946547 | Msa0244020:intron | 25.0% |
| !!! | TGTTTTTTATATGATCTGAG+AGG | + | chr2_2:21947013-21947032 | None:intergenic | 25.0% |
| ! | ATATGTCCTATTCAAGAATT+TGG | + | chr2_2:21947125-21947144 | None:intergenic | 25.0% |
| ! | ATATGATTTAAATTTAGGCC+CGG | - | chr2_2:21947312-21947331 | Msa0244020:intron | 25.0% |
| ! | TAAATCTAAAAAAACCTACC+GGG | + | chr2_2:21947333-21947352 | None:intergenic | 25.0% |
| !! | AACTTTTTATGTTCACATCA+TGG | + | chr2_2:21947747-21947766 | None:intergenic | 25.0% |
| !! | GAGTCAATTATACCTTTTTA+TGG | + | chr2_2:21948331-21948350 | None:intergenic | 25.0% |
| !! | AATGCATTGATCATTTCTTT+AGG | + | chr2_2:21943471-21943490 | None:intergenic | 25.0% |
| ! | AATGATCAATGCATTTGAAA+AGG | - | chr2_2:21943476-21943495 | Msa0244020:intron | 25.0% |
| !!! | TTTTTTATTGGAAACGAACT+CGG | + | chr2_2:21948567-21948586 | None:intergenic | 25.0% |
| ! | TACTCATTATATTCACACTA+TGG | + | chr2_2:21943924-21943943 | None:intergenic | 25.0% |
| !!! | TTCAAAATTGAGGGTATTTT+TGG | + | chr2_2:21944308-21944327 | None:intergenic | 25.0% |
| ! | TCTATAATAAAGATCGTTGT+TGG | - | chr2_2:21944534-21944553 | Msa0244020:intron | 25.0% |
| ! | TAATAAAAAAAGCGGAAAGA+CGG | - | chr2_2:21944716-21944735 | Msa0244020:intron | 25.0% |
| ! | TTAAATCAAGTATTTGGTCA+TGG | + | chr2_2:21944997-21945016 | None:intergenic | 25.0% |
| !! | ATTTTTATTAGGAACACTAG+GGG | + | chr2_2:21945078-21945097 | None:intergenic | 25.0% |
| ! | CATTATTAAATTGAGTTTGC+AGG | - | chr2_2:21945153-21945172 | Msa0244020:intron | 25.0% |
| !!! | ATTAATTGATTTTCGTTGGT+GGG | + | chr2_2:21945230-21945249 | None:intergenic | 25.0% |
| !!! | TATTAATTGATTTTCGTTGG+TGG | + | chr2_2:21945231-21945250 | None:intergenic | 25.0% |
| ! | TGTGATCGAAAATGAAAATA+TGG | + | chr2_2:21945294-21945313 | None:intergenic | 25.0% |
| ! | ATGTATTCTCGAAAAATTGT+TGG | + | chr2_2:21945356-21945375 | None:intergenic | 25.0% |
| !!! | ACAATTTTTCGAGAATACAT+TGG | - | chr2_2:21945356-21945375 | Msa0244020:intron | 25.0% |
| !! | GAAAATCATCTAAAGTTTCT+GGG | + | chr2_2:21945394-21945413 | None:intergenic | 25.0% |
| !! | TCATCATTGATGATATTAAC+AGG | + | chr2_2:21950336-21950355 | None:intergenic | 25.0% |
| ! | ATGAAGGTTATGATAACTAT+CGG | - | chr2_2:21945578-21945597 | Msa0244020:intron | 25.0% |
| ! | TAAATATCCATTCAATCCTA+AGG | - | chr2_2:21945613-21945632 | Msa0244020:intron | 25.0% |
| ! | AGTTATTAAACATCTCAAGA+AGG | - | chr2_2:21945823-21945842 | Msa0244020:intron | 25.0% |
| ! | TCTCTACAATCAACTAATAA+CGG | - | chr2_2:21946006-21946025 | Msa0244020:intron | 25.0% |
| !!! | AATCAACTAATAACGGATTA+CGG | - | chr2_2:21946013-21946032 | Msa0244020:intron | 25.0% |
| !! | ATAATAAAACCAAGAGCACT+TGG | - | chr2_2:21942767-21942786 | Msa0244020:CDS | 30.0% |
| !!! | ACTTTTTTATGTGCACATCA+TGG | + | chr2_2:21942829-21942848 | None:intergenic | 30.0% |
| TGTTCACATTATGGTTGTTA+GGG | + | chr2_2:21942913-21942932 | None:intergenic | 30.0% | |
| ATGTTCACATTATGGTTGTT+AGG | + | chr2_2:21942914-21942933 | None:intergenic | 30.0% | |
| ! | ATTCAGTTTTCTCTAGTTGT+GGG | - | chr2_2:21943031-21943050 | Msa0244020:CDS | 30.0% |
| TTCTACTTTATCTTCAGTTG+TGG | - | chr2_2:21943186-21943205 | Msa0244020:CDS | 30.0% | |
| ! | GAGCCAATTATACCTTTTTA+TGG | + | chr2_2:21943415-21943434 | None:intergenic | 30.0% |
| TACCAAACAATTCATGACAA+GGG | + | chr2_2:21943624-21943643 | None:intergenic | 30.0% | |
| TTCTTTATTGGAAACGAACT+CGG | + | chr2_2:21943651-21943670 | None:intergenic | 30.0% | |
| ! | AATCTACGAAATCTAGAGTT+CGG | + | chr2_2:21943706-21943725 | None:intergenic | 30.0% |
| TCATTTCCCCATATAATTGA+AGG | - | chr2_2:21943725-21943744 | Msa0244020:intron | 30.0% | |
| CATTTCCCCATATAATTGAA+GGG | - | chr2_2:21943726-21943745 | Msa0244020:intron | 30.0% | |
| TGTTGACCCTTCAATTATAT+GGG | + | chr2_2:21943735-21943754 | None:intergenic | 30.0% | |
| GTTACGGGAATTAGATATTA+TGG | + | chr2_2:21943899-21943918 | None:intergenic | 30.0% | |
| TATTCACACTATGGTTGTTA+CGG | + | chr2_2:21943915-21943934 | None:intergenic | 30.0% | |
| TAATGAGTACATGATGTGTA+AGG | - | chr2_2:21943935-21943954 | Msa0244020:intron | 30.0% | |
| !! | ACACAATAACGGTAGTTTTA+CGG | + | chr2_2:21944186-21944205 | None:intergenic | 30.0% |
| ACAACCCCTTTCAAAAAATT+TGG | - | chr2_2:21944267-21944286 | Msa0244020:intron | 30.0% | |
| CAACCCCTTTCAAAAAATTT+GGG | - | chr2_2:21944268-21944287 | Msa0244020:intron | 30.0% | |
| !!! | TCAGCCCAAATTTTTTGAAA+GGG | + | chr2_2:21944275-21944294 | None:intergenic | 30.0% |
| ! | GTTGTTTAAGGGTATAATTG+GGG | + | chr2_2:21944510-21944529 | None:intergenic | 30.0% |
| ! | GGTTGTTTAAGGGTATAATT+GGG | + | chr2_2:21944511-21944530 | None:intergenic | 30.0% |
| ! | AGGTTGTTTAAGGGTATAAT+TGG | + | chr2_2:21944512-21944531 | None:intergenic | 30.0% |
| CGTTAGCGTAATAAAAAAAG+CGG | - | chr2_2:21944708-21944727 | Msa0244020:intron | 30.0% | |
| ATAAATACTAGCGAAAAGAC+AGG | + | chr2_2:21944744-21944763 | None:intergenic | 30.0% | |
| TGTCTTTGTATGCCTATTAT+TGG | + | chr2_2:21945054-21945073 | None:intergenic | 30.0% | |
| ! | AAAAATTGTTGGCCTCAAAA+CGG | + | chr2_2:21945345-21945364 | None:intergenic | 30.0% |
| ! | GGAAAATCATCTAAAGTTTC+TGG | + | chr2_2:21945395-21945414 | None:intergenic | 30.0% |
| AATCAATTCCACTTCATTCT+AGG | - | chr2_2:21945440-21945459 | Msa0244020:intron | 30.0% | |
| GTATAAAGATGGAAAAGGAA+CGG | - | chr2_2:21945478-21945497 | Msa0244020:intron | 30.0% | |
| TATAAAGATGGAAAAGGAAC+GGG | - | chr2_2:21945479-21945498 | Msa0244020:intron | 30.0% | |
| !!! | TGTGTTTGAACACTTTTTCT+GGG | + | chr2_2:21945541-21945560 | None:intergenic | 30.0% |
| !!! | TTGTGTTTGAACACTTTTTC+TGG | + | chr2_2:21945542-21945561 | None:intergenic | 30.0% |
| ! | TTTTTCTCCTTAGGATTGAA+TGG | + | chr2_2:21945623-21945642 | None:intergenic | 30.0% |
| ATTCAATCCTAAGGAGAAAA+AGG | - | chr2_2:21945622-21945641 | Msa0244020:intron | 30.0% | |
| !! | CATAGTTGATATCCATTTTG+TGG | + | chr2_2:21945934-21945953 | None:intergenic | 30.0% |
| CAATCAAACTATATCCTCAA+AGG | - | chr2_2:21945970-21945989 | Msa0244020:intron | 30.0% | |
| AAAATCACACACATGATCAT+GGG | + | chr2_2:21946355-21946374 | None:intergenic | 30.0% | |
| TAAAATCACACACATGATCA+TGG | + | chr2_2:21946356-21946375 | None:intergenic | 30.0% | |
| ! | TTTTATATGATCTGAGAGGT+AGG | + | chr2_2:21947009-21947028 | None:intergenic | 30.0% |
| !!! | AAACTAGGGTTTTTTGTTCT+TGG | + | chr2_2:21947050-21947069 | None:intergenic | 30.0% |
| !!! | ACAAAAAACCCTAGTTTTGA+AGG | - | chr2_2:21947053-21947072 | Msa0244020:intron | 30.0% |
| !! | TGATATTTTTGATCTCCTGA+TGG | + | chr2_2:21947084-21947103 | None:intergenic | 30.0% |
| ! | TATTCAAGAATTTGGTAGCA+TGG | + | chr2_2:21947117-21947136 | None:intergenic | 30.0% |
| ATGCTACCAAATTCTTGAAT+AGG | - | chr2_2:21947116-21947135 | Msa0244020:intron | 30.0% | |
| TAGGGGAATTAATCATTTGA+AGG | - | chr2_2:21947162-21947181 | Msa0244020:intron | 30.0% | |
| !!! | ATTTTTTTTTTAGGCCTGGT+AGG | - | chr2_2:21947274-21947293 | Msa0244020:intron | 30.0% |
| TGTTCACATTATGGTTGTTA+GGG | + | chr2_2:21942913-21942932 | None:intergenic | 30.0% | |
| ATGTTCACATTATGGTTGTT+AGG | + | chr2_2:21942914-21942933 | None:intergenic | 30.0% | |
| ! | ATTCAGTTTTCTCTAGTTGT+GGG | - | chr2_2:21943031-21943050 | Msa0244020:CDS | 30.0% |
| TTCTACTTTATCTTCAGTTG+TGG | - | chr2_2:21943186-21943205 | Msa0244020:CDS | 30.0% | |
| GAAAGAGATACAAAAAGTTG+GGG | + | chr2_2:21948238-21948257 | None:intergenic | 30.0% | |
| CGAAAGAGATACAAAAAGTT+GGG | + | chr2_2:21948239-21948258 | None:intergenic | 30.0% | |
| ACGAAAGAGATACAAAAAGT+TGG | + | chr2_2:21948240-21948259 | None:intergenic | 30.0% | |
| TACCAAACAATTCATCACAA+GGG | + | chr2_2:21948540-21948559 | None:intergenic | 30.0% | |
| ! | AATCTACGAAATCTAGAGTT+CGG | + | chr2_2:21943706-21943725 | None:intergenic | 30.0% |
| TCATTTCCCCATATAATTGA+AGG | - | chr2_2:21943725-21943744 | Msa0244020:intron | 30.0% | |
| CATTTCCCCATATAATTGAA+GGG | - | chr2_2:21943726-21943745 | Msa0244020:intron | 30.0% | |
| TGTTGACCCTTCAATTATAT+GGG | + | chr2_2:21943735-21943754 | None:intergenic | 30.0% | |
| GTTAGGGGAATTAGATATTA+TGG | + | chr2_2:21948819-21948838 | None:intergenic | 30.0% | |
| TATTCACACTATGGTTGTTA+GGG | + | chr2_2:21943915-21943934 | None:intergenic | 30.0% | |
| ATATTCACACTATGGTTGTT+AGG | + | chr2_2:21943916-21943935 | None:intergenic | 30.0% | |
| ACAACCCCTTTCAAAAAATT+TGG | - | chr2_2:21944267-21944286 | Msa0244020:intron | 30.0% | |
| CAACCCCTTTCAAAAAATTT+GGG | - | chr2_2:21944268-21944287 | Msa0244020:intron | 30.0% | |
| !!! | TCAGCCCAAATTTTTTGAAA+GGG | + | chr2_2:21944275-21944294 | None:intergenic | 30.0% |
| ! | GTTGTTTAAGGGTATAATTG+GGG | + | chr2_2:21944510-21944529 | None:intergenic | 30.0% |
| ! | GGTTGTTTAAGGGTATAATT+GGG | + | chr2_2:21944511-21944530 | None:intergenic | 30.0% |
| ! | AGGTTGTTTAAGGGTATAAT+TGG | + | chr2_2:21944512-21944531 | None:intergenic | 30.0% |
| CGTTAGCGTAATAAAAAAAG+CGG | - | chr2_2:21944708-21944727 | Msa0244020:intron | 30.0% | |
| ATAAATACTAGCGAAAAGAC+AGG | + | chr2_2:21944744-21944763 | None:intergenic | 30.0% | |
| TGTCTTTGTATGCCTATTAT+TGG | + | chr2_2:21945054-21945073 | None:intergenic | 30.0% | |
| ! | AAAAATTGTTGGCCTCAAAA+CGG | + | chr2_2:21945345-21945364 | None:intergenic | 30.0% |
| ! | GGAAAATCATCTAAAGTTTC+TGG | + | chr2_2:21945395-21945414 | None:intergenic | 30.0% |
| AATCAATTCCACTTCATTCT+AGG | - | chr2_2:21945440-21945459 | Msa0244020:intron | 30.0% | |
| GTATAAAGATGGAAAAGGAA+CGG | - | chr2_2:21945478-21945497 | Msa0244020:intron | 30.0% | |
| TATAAAGATGGAAAAGGAAC+GGG | - | chr2_2:21945479-21945498 | Msa0244020:intron | 30.0% | |
| !!! | TGTGTTTGAACACTTTTTCT+GGG | + | chr2_2:21945541-21945560 | None:intergenic | 30.0% |
| !!! | TTGTGTTTGAACACTTTTTC+TGG | + | chr2_2:21945542-21945561 | None:intergenic | 30.0% |
| GAAAGAACACAAGAATATGA+AGG | - | chr2_2:21950482-21950501 | Msa0244020:intron | 30.0% | |
| ! | TTTTTCTCCTTAGGATTGAA+TGG | + | chr2_2:21945623-21945642 | None:intergenic | 30.0% |
| ATTCAATCCTAAGGAGAAAA+AGG | - | chr2_2:21945622-21945641 | Msa0244020:intron | 30.0% | |
| !! | CATAGTTGATATCCATTTTG+TGG | + | chr2_2:21945934-21945953 | None:intergenic | 30.0% |
| CAATCAAACTATATCCTCAA+AGG | - | chr2_2:21945970-21945989 | Msa0244020:intron | 30.0% | |
| !! | GTTGTGATGATGGTTTAAAG+TGG | - | chr2_2:21942704-21942723 | Msa0244020:CDS | 35.0% |
| !!! | GCTCTTGGTTTTATTATCAC+CGG | + | chr2_2:21942764-21942783 | None:intergenic | 35.0% |
| ! | GATTCAGTTTTCTCTAGTTG+TGG | - | chr2_2:21943030-21943049 | Msa0244020:CDS | 35.0% |
| AGGATACAACAAGAATGGAA+CGG | + | chr2_2:21943137-21943156 | None:intergenic | 35.0% | |
| ! | TCCATTCTTGTTGTATCCTT+TGG | - | chr2_2:21943138-21943157 | Msa0244020:CDS | 35.0% |
| ! | CCATTCTTGTTGTATCCTTT+GGG | - | chr2_2:21943139-21943158 | Msa0244020:CDS | 35.0% |
| GAAAGAGATGCAAAAAGTTG+GGG | + | chr2_2:21943322-21943341 | None:intergenic | 35.0% | |
| CGAAAGAGATGCAAAAAGTT+GGG | + | chr2_2:21943323-21943342 | None:intergenic | 35.0% | |
| ACGAAAGAGATGCAAAAAGT+TGG | + | chr2_2:21943324-21943343 | None:intergenic | 35.0% | |
| ACCAAACAATTCATGACAAG+GGG | + | chr2_2:21943623-21943642 | None:intergenic | 35.0% | |
| GTACCAAACAATTCATGACA+AGG | + | chr2_2:21943625-21943644 | None:intergenic | 35.0% | |
| GTTGACCCTTCAATTATATG+GGG | + | chr2_2:21943734-21943753 | None:intergenic | 35.0% | |
| ! | GTGTTGACCCTTCAATTATA+TGG | + | chr2_2:21943736-21943755 | None:intergenic | 35.0% |
| ATTCACACTATGGTTGTTAC+GGG | + | chr2_2:21943914-21943933 | None:intergenic | 35.0% | |
| !!! | CAGCCCAAATTTTTTGAAAG+GGG | + | chr2_2:21944274-21944293 | None:intergenic | 35.0% |
| !!! | GTCAGCCCAAATTTTTTGAA+AGG | + | chr2_2:21944276-21944295 | None:intergenic | 35.0% |
| TAAATCTCACATACGAGTAG+AGG | + | chr2_2:21944855-21944874 | None:intergenic | 35.0% | |
| ACTCGTATGTGAGATTTAAG+TGG | - | chr2_2:21944857-21944876 | Msa0244020:intron | 35.0% | |
| GAGTTTGCAGGCTTATAAAA+AGG | - | chr2_2:21945165-21945184 | Msa0244020:intron | 35.0% | |
| ! | AAAAAGGCATACCAAGAGTT+TGG | - | chr2_2:21945181-21945200 | Msa0244020:intron | 35.0% |
| !!! | ACAATATCAATGCCGTTTTG+AGG | - | chr2_2:21945330-21945349 | Msa0244020:intron | 35.0% |
| ! | TCATCATTGATGATCTCAAC+AGG | + | chr2_2:21945416-21945435 | None:intergenic | 35.0% |
| GAGGTGTATAAAGATGGAAA+AGG | - | chr2_2:21945473-21945492 | Msa0244020:intron | 35.0% | |
| AAGGTTATGATAACTATCGG+AGG | - | chr2_2:21945581-21945600 | Msa0244020:intron | 35.0% | |
| TGAATGGATATTTAGTGCCA+TGG | + | chr2_2:21945607-21945626 | None:intergenic | 35.0% | |
| ATCCTAAGGAGAAAAAGGTA+TGG | - | chr2_2:21945627-21945646 | Msa0244020:intron | 35.0% | |
| ! | ATCCATACCTTTTTCTCCTT+AGG | + | chr2_2:21945632-21945651 | None:intergenic | 35.0% |
| TACCTTGTCAATGATGATTC+TGG | - | chr2_2:21945701-21945720 | Msa0244020:intron | 35.0% | |
| TACCAGAATCATCATTGACA+AGG | + | chr2_2:21945706-21945725 | None:intergenic | 35.0% | |
| !! | TATATCGATTCTAGTGTGAC+TGG | - | chr2_2:21945773-21945792 | Msa0244020:intron | 35.0% |
| !! | ATATCGATTCTAGTGTGACT+GGG | - | chr2_2:21945774-21945793 | Msa0244020:intron | 35.0% |
| ! | AATAACTTGTCCAATGCAGT+TGG | + | chr2_2:21945810-21945829 | None:intergenic | 35.0% |
| TAAGCATGTATCCAAATCCA+TGG | - | chr2_2:21945847-21945866 | Msa0244020:intron | 35.0% | |
| CCAAAACAATTTGTGGTAGT+GGG | + | chr2_2:21945909-21945928 | None:intergenic | 35.0% | |
| ! | CCACTACCACAAATTGTTTT+GGG | - | chr2_2:21945907-21945926 | Msa0244020:intron | 35.0% |
| !!! | ATTGTTTTGGGACCACAAAA+TGG | - | chr2_2:21945919-21945938 | Msa0244020:intron | 35.0% |
| ATCATCAAACTCATCCTTTG+AGG | + | chr2_2:21945987-21946006 | None:intergenic | 35.0% | |
| ! | TTACGGTGAGCTTAAACTTT+TGG | - | chr2_2:21946030-21946049 | Msa0244020:intron | 35.0% |
| !! | TTGCGATTTTAAGTGCGATT+AGG | - | chr2_2:21946851-21946870 | Msa0244020:intron | 35.0% |
| !! | TGCGATTTTAAGTGCGATTA+GGG | - | chr2_2:21946852-21946871 | Msa0244020:intron | 35.0% |
| AGCTAAGAAGAAAGTTAAGG+TGG | + | chr2_2:21946891-21946910 | None:intergenic | 35.0% | |
| CCTAGCTAAGAAGAAAGTTA+AGG | + | chr2_2:21946894-21946913 | None:intergenic | 35.0% | |
| CCTTAACTTTCTTCTTAGCT+AGG | - | chr2_2:21946891-21946910 | Msa0244020:intron | 35.0% | |
| ! | ATTTTTGATCTCCTGATGGA+TGG | + | chr2_2:21947080-21947099 | None:intergenic | 35.0% |
| TAGGACATATGTTCACATGA+TGG | - | chr2_2:21947135-21947154 | Msa0244020:intron | 35.0% | |
| ATGTTCACATGATGGTTGTT+AGG | - | chr2_2:21947143-21947162 | Msa0244020:intron | 35.0% | |
| TGTTCACATGATGGTTGTTA+GGG | - | chr2_2:21947144-21947163 | Msa0244020:intron | 35.0% | |
| !! | AGAGGTATTTAAAACCTACC+AGG | + | chr2_2:21947291-21947310 | None:intergenic | 35.0% |
| GATATTGTGAGCTTCAATGA+CGG | + | chr2_2:21947482-21947501 | None:intergenic | 35.0% | |
| !! | GTTGTGATGATGGTTTAAAG+TGG | - | chr2_2:21942704-21942723 | Msa0244020:CDS | 35.0% |
| !! | ATAATAAAGCCAAGAGCACT+TGG | - | chr2_2:21947685-21947704 | Msa0244020:intron | 35.0% |
| ! | GATTCAGTTTTCTCTAGTTG+TGG | - | chr2_2:21943030-21943049 | Msa0244020:CDS | 35.0% |
| AGGATACAACAAGAATGGAA+CGG | + | chr2_2:21943137-21943156 | None:intergenic | 35.0% | |
| ! | TCCATTCTTGTTGTATCCTT+TGG | - | chr2_2:21943138-21943157 | Msa0244020:CDS | 35.0% |
| ! | CCATTCTTGTTGTATCCTTT+GGG | - | chr2_2:21943139-21943158 | Msa0244020:CDS | 35.0% |
| ACCAAACAATTCATCACAAG+GGG | + | chr2_2:21948539-21948558 | None:intergenic | 35.0% | |
| GTACCAAACAATTCATCACA+AGG | + | chr2_2:21948541-21948560 | None:intergenic | 35.0% | |
| GTTGACCCTTCAATTATATG+GGG | + | chr2_2:21943734-21943753 | None:intergenic | 35.0% | |
| ! | GTGTTGACCCTTCAATTATA+TGG | + | chr2_2:21943736-21943755 | None:intergenic | 35.0% |
| ATTCACACTATGGTTGTTAG+GGG | + | chr2_2:21948834-21948853 | None:intergenic | 35.0% | |
| !!! | CAGCCCAAATTTTTTGAAAG+GGG | + | chr2_2:21944274-21944293 | None:intergenic | 35.0% |
| !!! | GTCAGCCCAAATTTTTTGAA+AGG | + | chr2_2:21944276-21944295 | None:intergenic | 35.0% |
| TAAATCTCACATACGAGTAG+AGG | + | chr2_2:21944855-21944874 | None:intergenic | 35.0% | |
| ACTCGTATGTGAGATTTAAG+TGG | - | chr2_2:21944857-21944876 | Msa0244020:intron | 35.0% | |
| GAGTTTGCAGGCTTATAAAA+AGG | - | chr2_2:21945165-21945184 | Msa0244020:intron | 35.0% | |
| ! | AAAAAGGCATACCAAGAGTT+TGG | - | chr2_2:21945181-21945200 | Msa0244020:intron | 35.0% |
| !!! | ACAATATCAATGCCGTTTTG+AGG | - | chr2_2:21945330-21945349 | Msa0244020:intron | 35.0% |
| GAGGTGTATAAAGATGGAAA+AGG | - | chr2_2:21945473-21945492 | Msa0244020:intron | 35.0% | |
| AAGGTTATGATAACTATCGG+AGG | - | chr2_2:21945581-21945600 | Msa0244020:intron | 35.0% | |
| TGAATGGATATTTAGTGCCA+TGG | + | chr2_2:21945607-21945626 | None:intergenic | 35.0% | |
| ATCCTAAGGAGAAAAAGGTA+TGG | - | chr2_2:21945627-21945646 | Msa0244020:intron | 35.0% | |
| ! | ATCCATACCTTTTTCTCCTT+AGG | + | chr2_2:21945632-21945651 | None:intergenic | 35.0% |
| TACCTTGTCAATGATGATTC+TGG | - | chr2_2:21945701-21945720 | Msa0244020:intron | 35.0% | |
| TACCAGAATCATCATTGACA+AGG | + | chr2_2:21945706-21945725 | None:intergenic | 35.0% | |
| !! | TATATCGATTCTAGTGTGAC+TGG | - | chr2_2:21945773-21945792 | Msa0244020:intron | 35.0% |
| !! | ATATCGATTCTAGTGTGACT+GGG | - | chr2_2:21945774-21945793 | Msa0244020:intron | 35.0% |
| ! | AATAACTTGTCCAATGCAGT+TGG | + | chr2_2:21945810-21945829 | None:intergenic | 35.0% |
| TAAGCATGTATCCAAATCCA+TGG | - | chr2_2:21945847-21945866 | Msa0244020:intron | 35.0% | |
| CCAAAACAATTTGTGGTAGT+GGG | + | chr2_2:21945909-21945928 | None:intergenic | 35.0% | |
| ! | CCACTACCACAAATTGTTTT+GGG | - | chr2_2:21945907-21945926 | Msa0244020:intron | 35.0% |
| !!! | ATTGTTTTGGGACCACAAAA+TGG | - | chr2_2:21945919-21945938 | Msa0244020:intron | 35.0% |
| ATCATCAAACTCATCCTTTG+AGG | + | chr2_2:21945987-21946006 | None:intergenic | 35.0% | |
| ! | TTACGGTGAGCTTAAACTTT+TGG | - | chr2_2:21946030-21946049 | Msa0244020:intron | 35.0% |
| CCCAAAGGATACAACAAGAA+TGG | + | chr2_2:21943142-21943161 | None:intergenic | 40.0% | |
| ! | TTCAGTTGTGGTAACTTGTC+TGG | - | chr2_2:21943198-21943217 | Msa0244020:CDS | 40.0% |
| CACGATATACTCCATTTGAG+TGG | - | chr2_2:21943275-21943294 | Msa0244020:CDS | 40.0% | |
| TCCCCTTGTCATGAATTGTT+TGG | - | chr2_2:21943619-21943638 | Msa0244020:intron | 40.0% | |
| GTGTTGGAATTCCAAACTCT+TGG | + | chr2_2:21945195-21945214 | None:intergenic | 40.0% | |
| !! | TGGGTTTGATTGGTTTGTGT+TGG | + | chr2_2:21945211-21945230 | None:intergenic | 40.0% |
| !!! | TTTTCGTTGGTGGGTTTGAT+TGG | + | chr2_2:21945221-21945240 | None:intergenic | 40.0% |
| TCCATCTTTATACACCTCAG+TGG | + | chr2_2:21945471-21945490 | None:intergenic | 40.0% | |
| GATATGTCTGATCGAGCTTA+TGG | + | chr2_2:21945663-21945682 | None:intergenic | 40.0% | |
| CATCAATTATGCTAGTGCAG+TGG | + | chr2_2:21945733-21945752 | None:intergenic | 40.0% | |
| CACTGCACTAGCATAATTGA+TGG | - | chr2_2:21945731-21945750 | Msa0244020:intron | 40.0% | |
| !! | TATCGATTCTAGTGTGACTG+GGG | - | chr2_2:21945775-21945794 | Msa0244020:intron | 40.0% |
| GGACACATATTCCATGGATT+TGG | + | chr2_2:21945861-21945880 | None:intergenic | 40.0% | |
| AGCAATGGACACATATTCCA+TGG | + | chr2_2:21945867-21945886 | None:intergenic | 40.0% | |
| ! | CCCACTACCACAAATTGTTT+TGG | - | chr2_2:21945906-21945925 | Msa0244020:intron | 40.0% |
| CCCAAAACAATTTGTGGTAG+TGG | + | chr2_2:21945910-21945929 | None:intergenic | 40.0% | |
| TGTGGTCCCAAAACAATTTG+TGG | + | chr2_2:21945916-21945935 | None:intergenic | 40.0% | |
| CATCTTAGTATCAGCTGGAT+CGG | + | chr2_2:21946068-21946087 | None:intergenic | 40.0% | |
| TGATACTAAGATGAACCGAG+AGG | - | chr2_2:21946075-21946094 | Msa0244020:intron | 40.0% | |
| ATCAACAGCAAATCACTCCT+TGG | - | chr2_2:21946124-21946143 | Msa0244020:intron | 40.0% | |
| ! | CACTCCTTGGACTTTTTGTT+TGG | - | chr2_2:21946137-21946156 | Msa0244020:intron | 40.0% |
| CACTCCAAACAAAAAGTCCA+AGG | + | chr2_2:21946144-21946163 | None:intergenic | 40.0% | |
| AGCATTTCCTCCAAGATGTA+AGG | + | chr2_2:21946205-21946224 | None:intergenic | 40.0% | |
| ! | CACTAAGGTTTTCGGAGAAT+AGG | + | chr2_2:21946607-21946626 | None:intergenic | 40.0% |
| TCATTATAGGAATTAGGGGC+TGG | + | chr2_2:21946706-21946725 | None:intergenic | 40.0% | |
| ATCGCACTTAAAATCGCAAG+AGG | + | chr2_2:21946850-21946869 | None:intergenic | 40.0% | |
| ! | AGGTAGGTAAGTTTTCAGTG+AGG | + | chr2_2:21946993-21947012 | None:intergenic | 40.0% |
| ! | TTTTGTTCTTGGCGCAGTTT+TGG | + | chr2_2:21947039-21947058 | None:intergenic | 40.0% |
| TGGATGGACCTTCAAAACTA+GGG | + | chr2_2:21947064-21947083 | None:intergenic | 40.0% | |
| ATGGATGGACCTTCAAAACT+AGG | + | chr2_2:21947065-21947084 | None:intergenic | 40.0% | |
| ! | TCAAGAATTTGGTAGCATGG+TGG | + | chr2_2:21947114-21947133 | None:intergenic | 40.0% |
| GTTCACATGATGGTTGTTAG+GGG | - | chr2_2:21947145-21947164 | Msa0244020:intron | 40.0% | |
| GATTTAAATTTAGGCCCGGT+AGG | - | chr2_2:21947316-21947335 | Msa0244020:intron | 40.0% | |
| TATATTTGTCGAGCACGTTG+AGG | + | chr2_2:21947413-21947432 | None:intergenic | 40.0% | |
| !! | GCTCTTGGCTTTATTATCAC+CGG | + | chr2_2:21947682-21947701 | None:intergenic | 40.0% |
| GTTCACATCATGGTTGTTTG+AGG | + | chr2_2:21947737-21947756 | None:intergenic | 40.0% | |
| CCCAAAGGATACAACAAGAA+TGG | + | chr2_2:21943142-21943161 | None:intergenic | 40.0% | |
| ! | TTCAGTTGTGGTAACTTGTC+TGG | - | chr2_2:21943198-21943217 | Msa0244020:CDS | 40.0% |
| TCCCCTTGTGATGAATTGTT+TGG | - | chr2_2:21948535-21948554 | Msa0244020:intron | 40.0% | |
| GTGTTGGAATTCCAAACTCT+TGG | + | chr2_2:21945195-21945214 | None:intergenic | 40.0% | |
| !! | TGGGTTTGATTGGTTTGTGT+TGG | + | chr2_2:21945211-21945230 | None:intergenic | 40.0% |
| !!! | TTTTCGTTGGTGGGTTTGAT+TGG | + | chr2_2:21945221-21945240 | None:intergenic | 40.0% |
| TCCATCTTTATACACCTCAG+TGG | + | chr2_2:21945471-21945490 | None:intergenic | 40.0% | |
| GATATGTCTGATCGAGCTTA+TGG | + | chr2_2:21945663-21945682 | None:intergenic | 40.0% | |
| CATCAATTATGCTAGTGCAG+TGG | + | chr2_2:21945733-21945752 | None:intergenic | 40.0% | |
| CACTGCACTAGCATAATTGA+TGG | - | chr2_2:21945731-21945750 | Msa0244020:intron | 40.0% | |
| !! | TATCGATTCTAGTGTGACTG+GGG | - | chr2_2:21945775-21945794 | Msa0244020:intron | 40.0% |
| GGACACATATTCCATGGATT+TGG | + | chr2_2:21945861-21945880 | None:intergenic | 40.0% | |
| AGCAATGGACACATATTCCA+TGG | + | chr2_2:21945867-21945886 | None:intergenic | 40.0% | |
| ! | CCCACTACCACAAATTGTTT+TGG | - | chr2_2:21945906-21945925 | Msa0244020:intron | 40.0% |
| CCCAAAACAATTTGTGGTAG+TGG | + | chr2_2:21945910-21945929 | None:intergenic | 40.0% | |
| TGTGGTCCCAAAACAATTTG+TGG | + | chr2_2:21945916-21945935 | None:intergenic | 40.0% | |
| CATCTTAGTATCAGCTGGAT+CGG | + | chr2_2:21946068-21946087 | None:intergenic | 40.0% | |
| TGATACTAAGATGAACCGAG+AGG | - | chr2_2:21946075-21946094 | Msa0244020:intron | 40.0% | |
| ATCAACAGCAAATCACTCCT+TGG | - | chr2_2:21946124-21946143 | Msa0244020:intron | 40.0% | |
| ! | CACTCCTTGGACTTTTTGTT+TGG | - | chr2_2:21946137-21946156 | Msa0244020:intron | 40.0% |
| CACTCCAAACAAAAAGTCCA+AGG | + | chr2_2:21946144-21946163 | None:intergenic | 40.0% | |
| AGCATTTCCTCCAAGATGTA+AGG | + | chr2_2:21946205-21946224 | None:intergenic | 40.0% | |
| AAGTGGTGTTTCCTAGAGCT+AGG | - | chr2_2:21942721-21942740 | Msa0244020:CDS | 45.0% | |
| AGTGGTGTTTCCTAGAGCTA+GGG | - | chr2_2:21942722-21942741 | Msa0244020:CDS | 45.0% | |
| GGGGCTGATGACTTAAAATC+CGG | - | chr2_2:21942742-21942761 | Msa0244020:CDS | 45.0% | |
| GTGCACATCATGGTTGTTTG+AGG | + | chr2_2:21942819-21942838 | None:intergenic | 45.0% | |
| ! | CTAGTTGTGGGTCGTGATTT+TGG | - | chr2_2:21943043-21943062 | Msa0244020:CDS | 45.0% |
| ATATGCCGATCTTTCCGCAA+CGG | - | chr2_2:21943085-21943104 | Msa0244020:CDS | 45.0% | |
| ! | TCTTGTTGTATCCTTTGGGC+CGG | - | chr2_2:21943143-21943162 | Msa0244020:CDS | 45.0% |
| CAAAACCAACCCAAACTCTC+CGG | + | chr2_2:21943165-21943184 | None:intergenic | 45.0% | |
| ACTCCATTTGAGTGGTACCA+TGG | - | chr2_2:21943283-21943302 | Msa0244020:CDS | 45.0% | |
| CTCCATTTGAGTGGTACCAT+GGG | - | chr2_2:21943284-21943303 | Msa0244020:CDS | 45.0% | |
| ATTTGAGTGGTACCATGGGT+CGG | - | chr2_2:21943288-21943307 | Msa0244020:CDS | 45.0% | |
| ! | AAATCTAGAGTTCGGCTGCA+AGG | + | chr2_2:21943698-21943717 | None:intergenic | 45.0% |
| TTCGCGAGCTATCAACTCAA+AGG | + | chr2_2:21944107-21944126 | None:intergenic | 45.0% | |
| !! | TGAGTTGATAGCTCGCGAAT+AGG | - | chr2_2:21944108-21944127 | Msa0244020:intron | 45.0% |
| ACATACGAGTAGAGGAGATG+AGG | + | chr2_2:21944847-21944866 | None:intergenic | 45.0% | |
| TCGAGAATACATTGGCGTGA+AGG | - | chr2_2:21945364-21945383 | Msa0244020:intron | 45.0% | |
| GCCACTGAGGTGTATAAAGA+TGG | - | chr2_2:21945467-21945486 | Msa0244020:intron | 45.0% | |
| ATGATAACTATCGGAGGCCA+TGG | - | chr2_2:21945587-21945606 | Msa0244020:intron | 45.0% | |
| !! | ACAATTTGTGGTAGTGGGCT+TGG | + | chr2_2:21945904-21945923 | None:intergenic | 45.0% |
| ! | GGTGAGCTTAAACTTTTGGC+AGG | - | chr2_2:21946034-21946053 | Msa0244020:intron | 45.0% |
| CGGTTCATCTTAGTATCAGC+TGG | + | chr2_2:21946073-21946092 | None:intergenic | 45.0% | |
| !! | AACCGAGAGGTGTTCATTGA+GGG | - | chr2_2:21946088-21946107 | Msa0244020:intron | 45.0% |
| TAAGGCTCGATGTCATTGCT+CGG | + | chr2_2:21946187-21946206 | None:intergenic | 45.0% | |
| TGACATCGAGCCTTACATCT+TGG | - | chr2_2:21946192-21946211 | Msa0244020:intron | 45.0% | |
| CGGAGAATAGGTGAACTAAG+AGG | + | chr2_2:21946595-21946614 | None:intergenic | 45.0% | |
| ! | GGAAACATTGGTGGTAGGTT+AGG | + | chr2_2:21946920-21946939 | None:intergenic | 45.0% |
| GCATGATGATCAGCGAAGAA+CGG | + | chr2_2:21946945-21946964 | None:intergenic | 45.0% | |
| CAATGCTAACGTATGAGGAC+TGG | + | chr2_2:21946970-21946989 | None:intergenic | 45.0% | |
| TGAGGCAATGCTAACGTATG+AGG | + | chr2_2:21946975-21946994 | None:intergenic | 45.0% | |
| !!! | GTTTTGAAGGTCCATCCATC+AGG | - | chr2_2:21947066-21947085 | Msa0244020:intron | 45.0% |
| AAGTGGTGTTTCCTAGAGCT+AGG | - | chr2_2:21942721-21942740 | Msa0244020:CDS | 45.0% | |
| AGTGGTGTTTCCTAGAGCTA+GGG | - | chr2_2:21942722-21942741 | Msa0244020:CDS | 45.0% | |
| GGGGCTGATGACTTAAAATC+CGG | - | chr2_2:21942742-21942761 | Msa0244020:CDS | 45.0% | |
| CAATCTCATCCAAGTGCTCT+TGG | + | chr2_2:21947697-21947716 | None:intergenic | 45.0% | |
| ! | CTAGTTGTGGGTCGTGATTT+TGG | - | chr2_2:21943043-21943062 | Msa0244020:CDS | 45.0% |
| ATATGCCGATCTTTCCGCAA+CGG | - | chr2_2:21943085-21943104 | Msa0244020:CDS | 45.0% | |
| ! | TCTTGTTGTATCCTTTGGGC+CGG | - | chr2_2:21943143-21943162 | Msa0244020:CDS | 45.0% |
| CAAAACCAACCCAAACTCTC+CGG | + | chr2_2:21943165-21943184 | None:intergenic | 45.0% | |
| CACGATATACTCCGTTTGAG+TGG | - | chr2_2:21948191-21948210 | Msa0244020:intron | 45.0% | |
| ! | AAATCTAGAGTTCGGCTGCA+AGG | + | chr2_2:21943698-21943717 | None:intergenic | 45.0% |
| ACATACGAGTAGAGGAGATG+AGG | + | chr2_2:21944847-21944866 | None:intergenic | 45.0% | |
| TCGAGAATACATTGGCGTGA+AGG | - | chr2_2:21945364-21945383 | Msa0244020:intron | 45.0% | |
| GCCACTGAGGTGTATAAAGA+TGG | - | chr2_2:21945467-21945486 | Msa0244020:intron | 45.0% | |
| ATGATAACTATCGGAGGCCA+TGG | - | chr2_2:21945587-21945606 | Msa0244020:intron | 45.0% | |
| !! | ACAATTTGTGGTAGTGGGCT+TGG | + | chr2_2:21945904-21945923 | None:intergenic | 45.0% |
| ! | GGTGAGCTTAAACTTTTGGC+AGG | - | chr2_2:21946034-21946053 | Msa0244020:intron | 45.0% |
| CGGTTCATCTTAGTATCAGC+TGG | + | chr2_2:21946073-21946092 | None:intergenic | 45.0% | |
| !! | AACCGAGAGGTGTTCATTGA+GGG | - | chr2_2:21946088-21946107 | Msa0244020:intron | 45.0% |
| TAAGGCTCGATGTCATTGCT+CGG | + | chr2_2:21946187-21946206 | None:intergenic | 45.0% | |
| TGACATCGAGCCTTACATCT+TGG | - | chr2_2:21946192-21946211 | Msa0244020:intron | 45.0% | |
| !!! | TCTTTTTTTTAATTTTTATT+AGG | + | chr2_2:21945089-21945108 | None:intergenic | 5.0% |
| !!! | TATCTAATAATTTTTTTTTT+AGG | - | chr2_2:21947265-21947284 | Msa0244020:intron | 5.0% |
| !!! | TCTTTTTTTTAATTTTTATT+AGG | + | chr2_2:21945089-21945108 | None:intergenic | 5.0% |
| GTGGTGTTTCCTAGAGCTAG+GGG | - | chr2_2:21942723-21942742 | Msa0244020:CDS | 50.0% | |
| CCATCTCATCCAAGTGCTCT+TGG | + | chr2_2:21942779-21942798 | None:intergenic | 50.0% | |
| !! | CCAAGAGCACTTGGATGAGA+TGG | - | chr2_2:21942776-21942795 | Msa0244020:CDS | 50.0% |
| AACCACCGTTGCGGAAAGAT+CGG | + | chr2_2:21943093-21943112 | None:intergenic | 50.0% | |
| GACCCATGGTACCACTCAAA+TGG | + | chr2_2:21943289-21943308 | None:intergenic | 50.0% | |
| TGGCGAAGCCTAGAATGAAG+TGG | + | chr2_2:21945451-21945470 | None:intergenic | 50.0% | |
| ! | GCTGACTTCTCCAACTGCAT+TGG | - | chr2_2:21945797-21945816 | Msa0244020:intron | 50.0% |
| !! | ATTTGTGGTAGTGGGCTTGG+AGG | + | chr2_2:21945901-21945920 | None:intergenic | 50.0% |
| !! | GAACCGAGAGGTGTTCATTG+AGG | - | chr2_2:21946087-21946106 | Msa0244020:intron | 50.0% |
| CATCGAGCCTTACATCTTGG+AGG | - | chr2_2:21946195-21946214 | Msa0244020:intron | 50.0% | |
| CTGCATGTGTGTGTTGTGCT+TGG | - | chr2_2:21946386-21946405 | Msa0244020:intron | 50.0% | |
| AGAACGGTGGGAAACATTGG+TGG | + | chr2_2:21946929-21946948 | None:intergenic | 50.0% | |
| CGAAGAACGGTGGGAAACAT+TGG | + | chr2_2:21946932-21946951 | None:intergenic | 50.0% | |
| GATGATCAGCGAAGAACGGT+GGG | + | chr2_2:21946941-21946960 | None:intergenic | 50.0% | |
| TGATGATCAGCGAAGAACGG+TGG | + | chr2_2:21946942-21946961 | None:intergenic | 50.0% | |
| GTGGTGTTTCCTAGAGCTAG+GGG | - | chr2_2:21942723-21942742 | Msa0244020:CDS | 50.0% | |
| AACCACCGTTGCGGAAAGAT+CGG | + | chr2_2:21943093-21943112 | None:intergenic | 50.0% | |
| ACTCCGTTTGAGTGGTACCA+TGG | - | chr2_2:21948199-21948218 | Msa0244020:intron | 50.0% | |
| CTCCGTTTGAGTGGTACCAT+GGG | - | chr2_2:21948200-21948219 | Msa0244020:intron | 50.0% | |
| GACCCATGGTACCACTCAAA+CGG | + | chr2_2:21943289-21943308 | None:intergenic | 50.0% | |
| GTTTGAGTGGTACCATGGGT+CGG | - | chr2_2:21948204-21948223 | Msa0244020:intron | 50.0% | |
| TTCGCGAGCTATCAGCTCAA+AGG | + | chr2_2:21949022-21949041 | None:intergenic | 50.0% | |
| TGAGCTGATAGCTCGCGAAT+AGG | - | chr2_2:21949023-21949042 | Msa0244020:intron | 50.0% | |
| TGGCGAAGCCTAGAATGAAG+TGG | + | chr2_2:21945451-21945470 | None:intergenic | 50.0% | |
| ! | GCTGACTTCTCCAACTGCAT+TGG | - | chr2_2:21945797-21945816 | Msa0244020:intron | 50.0% |
| !! | ATTTGTGGTAGTGGGCTTGG+AGG | + | chr2_2:21945901-21945920 | None:intergenic | 50.0% |
| !! | GAACCGAGAGGTGTTCATTG+AGG | - | chr2_2:21946087-21946106 | Msa0244020:intron | 50.0% |
| CATCGAGCCTTACATCTTGG+AGG | - | chr2_2:21946195-21946214 | Msa0244020:intron | 50.0% | |
| ! | AGTCATCAGCCCCTAGCTCT+AGG | + | chr2_2:21942735-21942754 | None:intergenic | 55.0% |
| ATGAAGCGCAACCACCGTTG+CGG | + | chr2_2:21943102-21943121 | None:intergenic | 55.0% | |
| ATCCTTTGGGCCGGAGAGTT+TGG | - | chr2_2:21943152-21943171 | Msa0244020:CDS | 55.0% | |
| TCCTTTGGGCCGGAGAGTTT+GGG | - | chr2_2:21943153-21943172 | Msa0244020:CDS | 55.0% | |
| ! | GGGGTATTAGATCCGACCCA+TGG | + | chr2_2:21943303-21943322 | None:intergenic | 55.0% |
| CATTCTAGGCTTCGCCACTG+AGG | - | chr2_2:21945454-21945473 | Msa0244020:intron | 55.0% | |
| CGGGACATTTCGTTCGCGAT+TGG | - | chr2_2:21945498-21945517 | Msa0244020:intron | 55.0% | |
| CGCCCTCAATGAACACCTCT+CGG | + | chr2_2:21946093-21946112 | None:intergenic | 55.0% | |
| ! | GATGTCATTGCTCGGTGGGT+TGG | + | chr2_2:21946179-21946198 | None:intergenic | 55.0% |
| GCTCGATGTCATTGCTCGGT+GGG | + | chr2_2:21946183-21946202 | None:intergenic | 55.0% | |
| ! | CGGTGGGAAACATTGGTGGT+AGG | + | chr2_2:21946925-21946944 | None:intergenic | 55.0% |
| ! | AGTCATCAGCCCCTAGCTCT+AGG | + | chr2_2:21942735-21942754 | None:intergenic | 55.0% |
| ATCCTTTGGGCCGGAGAGTT+TGG | - | chr2_2:21943152-21943171 | Msa0244020:CDS | 55.0% | |
| TCCTTTGGGCCGGAGAGTTT+GGG | - | chr2_2:21943153-21943172 | Msa0244020:CDS | 55.0% | |
| ! | TCTGGCTTCGTGTGTGTTCG+TGG | - | chr2_2:21943216-21943235 | Msa0244020:CDS | 55.0% |
| ! | GGGGTATTAGATCCGACCCA+TGG | + | chr2_2:21943303-21943322 | None:intergenic | 55.0% |
| CATTCTAGGCTTCGCCACTG+AGG | - | chr2_2:21945454-21945473 | Msa0244020:intron | 55.0% | |
| CGGGACATTTCGTTCGCGAT+TGG | - | chr2_2:21945498-21945517 | Msa0244020:intron | 55.0% | |
| CGCCCTCAATGAACACCTCT+CGG | + | chr2_2:21946093-21946112 | None:intergenic | 55.0% | |
| ! | GATGTCATTGCTCGGTGGGT+TGG | + | chr2_2:21946179-21946198 | None:intergenic | 55.0% |
| GCTCGATGTCATTGCTCGGT+GGG | + | chr2_2:21946183-21946202 | None:intergenic | 55.0% | |
| TGCCGATCTTTCCGCAACGG+TGG | - | chr2_2:21943088-21943107 | Msa0244020:CDS | 60.0% | |
| GCAACGGTGGTTGCGCTTCA+TGG | - | chr2_2:21943101-21943120 | Msa0244020:CDS | 60.0% | |
| GGTTGCGCTTCATGGTCTGC+AGG | - | chr2_2:21943109-21943128 | Msa0244020:CDS | 60.0% | |
| ACCCAAACTCTCCGGCCCAA+AGG | + | chr2_2:21943157-21943176 | None:intergenic | 60.0% | |
| TTGGGCCGGAGAGTTTGGGT+TGG | - | chr2_2:21943157-21943176 | Msa0244020:CDS | 60.0% | |
| GAGGAGCTCTGTCGGAGCAA+TGG | + | chr2_2:21945882-21945901 | None:intergenic | 60.0% | |
| TGGGCTTGGAGGAGCTCTGT+CGG | + | chr2_2:21945890-21945909 | None:intergenic | 60.0% | |
| GGCTCGATGTCATTGCTCGG+TGG | + | chr2_2:21946184-21946203 | None:intergenic | 60.0% | |
| TGCCGATCTTTCCGCAACGG+TGG | - | chr2_2:21943088-21943107 | Msa0244020:CDS | 60.0% | |
| ACGAAGCGCAACCACCGTTG+CGG | + | chr2_2:21948018-21948037 | None:intergenic | 60.0% | |
| ACCCAAACTCTCCGGCCCAA+AGG | + | chr2_2:21943157-21943176 | None:intergenic | 60.0% | |
| TTGGGCCGGAGAGTTTGGGT+TGG | - | chr2_2:21943157-21943176 | Msa0244020:CDS | 60.0% | |
| GAGGAGCTCTGTCGGAGCAA+TGG | + | chr2_2:21945882-21945901 | None:intergenic | 60.0% | |
| TGGGCTTGGAGGAGCTCTGT+CGG | + | chr2_2:21945890-21945909 | None:intergenic | 60.0% | |
| GGCTCGATGTCATTGCTCGG+TGG | + | chr2_2:21946184-21946203 | None:intergenic | 60.0% | |
| GCAACGGTGGTTGCGCTTCG+TGG | - | chr2_2:21948017-21948036 | Msa0244020:CDS | 65.0% | |
| GGTTGCGCTTCGTGGTCTGC+AGG | - | chr2_2:21948025-21948044 | Msa0244020:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 21942587 | 21951169 | 21942587 | ID=Msa0244020;Name=Msa0244020 |
| chr2_2 | mRNA | 21942587 | 21951169 | 21942587 | ID=Msa0244020-mRNA-1;Parent=Msa0244020;Name=Msa0244020-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|0|0|0.83|0|0|6|0|520 |
| chr2_2 | exon | 21951164 | 21951169 | 21951164 | ID=Msa0244020-mRNA-1:exon:8561;Parent=Msa0244020-mRNA-1 |
| chr2_2 | exon | 21948209 | 21948370 | 21948209 | ID=Msa0244020-mRNA-1:exon:8560;Parent=Msa0244020-mRNA-1 |
| chr2_2 | exon | 21947933 | 21948172 | 21947933 | ID=Msa0244020-mRNA-1:exon:8559;Parent=Msa0244020-mRNA-1 |
| chr2_2 | exon | 21947722 | 21947914 | 21947722 | ID=Msa0244020-mRNA-1:exon:8558;Parent=Msa0244020-mRNA-1 |
| chr2_2 | exon | 21947603 | 21947700 | 21947603 | ID=Msa0244020-mRNA-1:exon:8557;Parent=Msa0244020-mRNA-1 |
| chr2_2 | exon | 21942587 | 21943450 | 21942587 | ID=Msa0244020-mRNA-1:exon:8556;Parent=Msa0244020-mRNA-1 |
| chr2_2 | CDS | 21951164 | 21951169 | 21951164 | ID=Msa0244020-mRNA-1:cds;Parent=Msa0244020-mRNA-1 |
| chr2_2 | CDS | 21948209 | 21948370 | 21948209 | ID=Msa0244020-mRNA-1:cds;Parent=Msa0244020-mRNA-1 |
| chr2_2 | CDS | 21947933 | 21948172 | 21947933 | ID=Msa0244020-mRNA-1:cds;Parent=Msa0244020-mRNA-1 |
| chr2_2 | CDS | 21947722 | 21947914 | 21947722 | ID=Msa0244020-mRNA-1:cds;Parent=Msa0244020-mRNA-1 |
| chr2_2 | CDS | 21947603 | 21947700 | 21947603 | ID=Msa0244020-mRNA-1:cds;Parent=Msa0244020-mRNA-1 |
| chr2_2 | CDS | 21942587 | 21943450 | 21942587 | ID=Msa0244020-mRNA-1:cds;Parent=Msa0244020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
