Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0244050 | XP_013441887.1 | 79.412 | 170 | 13 | 2 | 1 | 150 | 20 | 187 | 1.26e-87 | 271 |
| Msa0244050 | XP_013441887.1 | 83.607 | 61 | 10 | 0 | 150 | 210 | 250 | 310 | 1.64e-24 | 108 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0244050 | sp|Q9SLP4|CHIT1_TULSB | 30.769 | 169 | 69 | 6 | 1 | 143 | 32 | 178 | 8.69e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0244050 | A0A072TEX8 | 79.412 | 170 | 13 | 2 | 1 | 150 | 20 | 187 | 5.99e-88 | 271 |
| Msa0244050 | A0A072TEX8 | 83.607 | 61 | 10 | 0 | 150 | 210 | 250 | 310 | 7.84e-25 | 108 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0201430 | Msa0244050 | 0.841340 | 5.041267e-58 | -8.615850e-47 |
| Msa0201440 | Msa0244050 | 0.852249 | 5.225165e-61 | -8.615850e-47 |
| Msa0201450 | Msa0244050 | 0.819922 | 9.005885e-53 | -8.615850e-47 |
| Msa0201460 | Msa0244050 | 0.846790 | 1.740456e-59 | -8.615850e-47 |
| Msa0201470 | Msa0244050 | 0.826255 | 2.998325e-54 | -8.615850e-47 |
| Msa0244020 | Msa0244050 | 0.833305 | 5.754971e-56 | -8.615850e-47 |
| Msa0244030 | Msa0244050 | 0.853962 | 1.688575e-61 | -8.615850e-47 |
| Msa0244040 | Msa0244050 | 0.895810 | 6.728224e-76 | -8.615850e-47 |
| Msa0244050 | Msa0244060 | 0.857011 | 2.181470e-62 | -8.615850e-47 |
| Msa0244050 | Msa0244070 | 0.865825 | 4.459537e-65 | -8.615850e-47 |
| Msa0244050 | Msa0244080 | 0.832524 | 9.001061e-56 | -8.615850e-47 |
| Msa0244050 | Msa0282910 | 0.817523 | 3.155537e-52 | -8.615850e-47 |
| Msa0244050 | Msa0282920 | 0.836680 | 8.119770e-57 | -8.615850e-47 |
| Msa0244050 | Msa0282930 | 0.852764 | 3.725600e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0244050 | MtrunA17_Chr2g0303381 | 79.412 | 170 | 13 | 2 | 1 | 150 | 20 | 187 | 1.15e-91 | 271 |
| Msa0244050 | MtrunA17_Chr2g0303381 | 83.607 | 61 | 10 | 0 | 150 | 210 | 250 | 310 | 1.51e-28 | 108 |
| Msa0244050 | MtrunA17_Chr2g0303401 | 79.412 | 170 | 13 | 2 | 1 | 150 | 20 | 187 | 1.15e-91 | 271 |
| Msa0244050 | MtrunA17_Chr2g0303401 | 83.607 | 61 | 10 | 0 | 150 | 210 | 250 | 310 | 1.51e-28 | 108 |
| Msa0244050 | MtrunA17_Chr8g0350551 | 36.232 | 276 | 99 | 6 | 1 | 209 | 20 | 285 | 2.88e-44 | 149 |
| Msa0244050 | MtrunA17_Chr2g0297731 | 34.448 | 299 | 95 | 9 | 1 | 207 | 8 | 297 | 9.47e-42 | 143 |
| Msa0244050 | MtrunA17_Chr8g0350511 | 34.483 | 290 | 99 | 7 | 1 | 209 | 20 | 299 | 8.65e-41 | 140 |
| Msa0244050 | MtrunA17_Chr8g0350521 | 34.483 | 290 | 99 | 7 | 1 | 209 | 20 | 299 | 8.65e-41 | 140 |
| Msa0244050 | MtrunA17_Chr8g0350541 | 34.483 | 290 | 99 | 7 | 1 | 209 | 20 | 299 | 8.65e-41 | 140 |
| Msa0244050 | MtrunA17_Chr8g0350501 | 34.483 | 290 | 99 | 7 | 1 | 209 | 20 | 299 | 8.65e-41 | 140 |
| Msa0244050 | MtrunA17_Chr8g0350531 | 34.483 | 290 | 99 | 7 | 1 | 209 | 284 | 563 | 7.90e-39 | 140 |
| Msa0244050 | MtrunA17_Chr8g0350531 | 44.025 | 159 | 61 | 2 | 1 | 139 | 20 | 170 | 3.32e-32 | 122 |
| Msa0244050 | MtrunA17_Chr2g0297811 | 48.077 | 156 | 57 | 4 | 1 | 134 | 19 | 172 | 2.04e-33 | 121 |
| Msa0244050 | MtrunA17_Chr2g0297811 | 42.157 | 102 | 55 | 3 | 111 | 210 | 210 | 309 | 2.09e-17 | 79.0 |
| Msa0244050 | MtrunA17_Chr2g0297801 | 48.077 | 156 | 57 | 4 | 1 | 134 | 19 | 172 | 2.04e-33 | 121 |
| Msa0244050 | MtrunA17_Chr2g0297801 | 42.157 | 102 | 55 | 3 | 111 | 210 | 210 | 309 | 2.09e-17 | 79.0 |
| Msa0244050 | MtrunA17_Chr2g0297791 | 48.077 | 156 | 57 | 4 | 1 | 134 | 19 | 172 | 2.04e-33 | 121 |
| Msa0244050 | MtrunA17_Chr2g0297791 | 42.157 | 102 | 55 | 3 | 111 | 210 | 210 | 309 | 2.09e-17 | 79.0 |
| Msa0244050 | MtrunA17_Chr2g0297761 | 31.379 | 290 | 114 | 9 | 1 | 207 | 8 | 295 | 9.76e-29 | 108 |
| Msa0244050 | MtrunA17_Chr2g0297771 | 31.379 | 290 | 114 | 9 | 1 | 207 | 8 | 295 | 9.76e-29 | 108 |
| Msa0244050 | MtrunA17_Chr2g0297781 | 31.379 | 290 | 114 | 9 | 1 | 207 | 8 | 295 | 9.76e-29 | 108 |
| Msa0244050 | MtrunA17_Chr8g0350441 | 29.514 | 288 | 108 | 10 | 1 | 208 | 19 | 291 | 1.80e-25 | 100 |
| Msa0244050 | MtrunA17_Chr8g0350431 | 29.225 | 284 | 106 | 10 | 1 | 204 | 19 | 287 | 2.16e-25 | 100 |
| Msa0244050 | MtrunA17_Chr8g0350421 | 29.225 | 284 | 106 | 10 | 1 | 204 | 19 | 287 | 2.16e-25 | 100 |
| Msa0244050 | MtrunA17_Chr8g0350411 | 29.225 | 284 | 106 | 10 | 1 | 204 | 19 | 287 | 2.16e-25 | 100 |
| Msa0244050 | MtrunA17_Chr8g0350451 | 35.625 | 160 | 65 | 6 | 1 | 139 | 19 | 161 | 1.66e-15 | 73.2 |
| Msa0244050 | MtrunA17_Chr8g0350461 | 35.625 | 160 | 65 | 6 | 1 | 139 | 19 | 161 | 1.66e-15 | 73.2 |
| Msa0244050 | MtrunA17_Chr8g0350471 | 35.625 | 160 | 65 | 6 | 1 | 139 | 19 | 161 | 1.66e-15 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 44 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAAAATCATCTAAAGTTTC+TGG | 0.145221 | 2_2:+22014041 | None:intergenic |
| AATCAATTCCACTTCATTCT+AGG | 0.205618 | 2_2:-22013993 | Msa0244050:CDS |
| TGTAGCTAGTAATCAATTAT+TGG | 0.249179 | 2_2:+22010223 | None:intergenic |
| GGACACATATTCCATGGATT+TGG | 0.302531 | 2_2:+22013575 | None:intergenic |
| GATATGTCTGATCGAGCTTA+TGG | 0.361529 | 2_2:+22013773 | None:intergenic |
| TACCTTGTCAATGATGATTC+TGG | 0.380807 | 2_2:-22013732 | Msa0244050:CDS |
| CGGGACATTTCGTTCGCGAT+TGG | 0.385507 | 2_2:-22013935 | Msa0244050:CDS |
| CACTGCACTAGCATAATTGA+TGG | 0.434540 | 2_2:-22013702 | Msa0244050:CDS |
| CGGTTCATCTTAGTATCAGC+TGG | 0.454457 | 2_2:+22010392 | None:intergenic |
| GAAAATCATCTAAAGTTTCT+GGG | 0.456174 | 2_2:+22014042 | None:intergenic |
| AGCATTTCCTCCAAGATGTA+AGG | 0.467593 | 2_2:+22010260 | None:intergenic |
| TCATCATTGATGATATCAAC+AGG | 0.470136 | 2_2:+22014020 | None:intergenic |
| GATGTCATTGCTCGGTGGGT+TGG | 0.481116 | 2_2:+22010286 | None:intergenic |
| TATATCGATTCTAGTGTGAC+TGG | 0.486159 | 2_2:-22013660 | Msa0244050:CDS |
| GCCACTGAGGTGTATAAAGA+TGG | 0.489071 | 2_2:-22013966 | Msa0244050:CDS |
| AACCGAGAGGTGTTCATTGA+GGG | 0.499384 | 2_2:-22010374 | Msa0244050:CDS |
| TCGAGAATACGTTGGCGTGA+AGG | 0.503627 | 2_2:-22014069 | None:intergenic |
| CGCCCTCAATGAACACCTCT+CGG | 0.504404 | 2_2:+22010372 | None:intergenic |
| TGACATCGAGCCTTACATCT+TGG | 0.507062 | 2_2:-22010270 | Msa0244050:CDS |
| TATAAAGATGGAAAAGGAAC+GGG | 0.518546 | 2_2:-22013954 | Msa0244050:CDS |
| CTAGTAATCAATTATTGGTA+AGG | 0.518596 | 2_2:+22010228 | None:intergenic |
| ATCAACAGCAAATCACTCCT+TGG | 0.519679 | 2_2:-22010338 | Msa0244050:CDS |
| GCTGACTTCTCCAACTGCAT+TGG | 0.521072 | 2_2:-22013636 | Msa0244050:CDS |
| AATAACTTGTCCAATGCAGT+TGG | 0.521593 | 2_2:+22013626 | None:intergenic |
| GCTCGATGTCATTGCTCGGT+GGG | 0.532171 | 2_2:+22010282 | None:intergenic |
| CATCGAGCCTTACATCTTGG+AGG | 0.554478 | 2_2:-22010267 | Msa0244050:CDS |
| GAAAGAACATAAGAATATGA+AGG | 0.556511 | 2_2:-22013871 | Msa0244050:intron |
| TAAGCATGTATCCAAATCCA+TGG | 0.557313 | 2_2:-22013586 | Msa0244050:CDS |
| CATCTTAGTATCAGCTGGAT+CGG | 0.557541 | 2_2:+22010397 | None:intergenic |
| GAGGTGTATAAAGATGGAAA+AGG | 0.564302 | 2_2:-22013960 | Msa0244050:CDS |
| GAACCGAGAGGTGTTCATTG+AGG | 0.566347 | 2_2:-22010375 | Msa0244050:CDS |
| AGCAATGGACACATATTCCA+TGG | 0.567858 | 2_2:+22013569 | None:intergenic |
| GGCTCGATGTCATTGCTCGG+TGG | 0.574776 | 2_2:+22010281 | None:intergenic |
| ATATCGATTCTAGTGTGACT+GGG | 0.576037 | 2_2:-22013659 | Msa0244050:CDS |
| TAAGGCTCGATGTCATTGCT+CGG | 0.600452 | 2_2:+22010278 | None:intergenic |
| AGTTATTAAACATCTCAAGA+AGG | 0.601516 | 2_2:-22013610 | Msa0244050:CDS |
| GTATAAAGATGGAAAAGGAA+CGG | 0.613441 | 2_2:-22013955 | Msa0244050:CDS |
| TGGCGAAGCCTAGAATGAAG+TGG | 0.614487 | 2_2:+22013985 | None:intergenic |
| TACCAGAATCATCATTGACA+AGG | 0.665409 | 2_2:+22013730 | None:intergenic |
| TCCATCTTTATACACCTCAG+TGG | 0.670679 | 2_2:+22013965 | None:intergenic |
| CATCAATTATGCTAGTGCAG+TGG | 0.677859 | 2_2:+22013703 | None:intergenic |
| CATTCTAGGCTTCGCCACTG+AGG | 0.701525 | 2_2:-22013979 | Msa0244050:CDS |
| TATCGATTCTAGTGTGACTG+GGG | 0.708158 | 2_2:-22013658 | Msa0244050:CDS |
| TGATACTAAGATGAACCGAG+AGG | 0.777827 | 2_2:-22010387 | Msa0244050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAATAATTTATAAGTCA+TGG | + | chr2_2:22011570-22011589 | None:intergenic | 10.0% |
| !!! | TGATCTGAAATAAAATAAAA+GGG | - | chr2_2:22011078-22011097 | Msa0244050:intron | 15.0% |
| !!! | ATACTTTTAAAGTGATATAA+TGG | + | chr2_2:22012069-22012088 | None:intergenic | 15.0% |
| !! | ATGAATTAAATATGCAATTT+CGG | + | chr2_2:22012160-22012179 | None:intergenic | 15.0% |
| !! | AGTTAAATTTATGATTGAAA+TGG | + | chr2_2:22013109-22013128 | None:intergenic | 15.0% |
| !!! | ATTCTAGATAAGTTTAGTTT+GGG | + | chr2_2:22010845-22010864 | None:intergenic | 20.0% |
| !! | TATTCTAGATAAGTTTAGTT+TGG | + | chr2_2:22010846-22010865 | None:intergenic | 20.0% |
| !!! | CTAATTCAGATTATTTGTTA+CGG | + | chr2_2:22010990-22011009 | None:intergenic | 20.0% |
| !!! | CTGATCTGAAATAAAATAAA+AGG | - | chr2_2:22011077-22011096 | Msa0244050:intron | 20.0% |
| !! | TGAAATAAAATAAAAGGGAT+TGG | - | chr2_2:22011083-22011102 | Msa0244050:intron | 20.0% |
| !! | GAAATAAAATAAAAGGGATT+GGG | - | chr2_2:22011084-22011103 | Msa0244050:intron | 20.0% |
| !! | AAATAAAATAAAAGGGATTG+GGG | - | chr2_2:22011085-22011104 | Msa0244050:intron | 20.0% |
| !!! | TATTATCTGAGTTGATTTTA+CGG | - | chr2_2:22011361-22011380 | Msa0244050:intron | 20.0% |
| !!! | ATTTTATAACCTTTTAGGAA+TGG | + | chr2_2:22011802-22011821 | None:intergenic | 20.0% |
| !!! | GGAAAATTTTATAACCTTTT+AGG | + | chr2_2:22011807-22011826 | None:intergenic | 20.0% |
| !!! | ATTTAGTTTATCAGAATATG+AGG | + | chr2_2:22011828-22011847 | None:intergenic | 20.0% |
| !! | ACACAAATAAATATACACTA+TGG | - | chr2_2:22011958-22011977 | Msa0244050:intron | 20.0% |
| !! | GGATATTCATAATACAATTT+CGG | - | chr2_2:22011996-22012015 | Msa0244050:intron | 20.0% |
| !!! | TTTAAAGTGATATAATGGTT+TGG | + | chr2_2:22012064-22012083 | None:intergenic | 20.0% |
| !!! | TATGTTGATAAATATGCTTA+TGG | + | chr2_2:22012230-22012249 | None:intergenic | 20.0% |
| !! | TATCATAATGTCTCTAAATT+TGG | - | chr2_2:22012290-22012309 | Msa0244050:intron | 20.0% |
| !!! | TAGAGTAATAGAATATGTTT+TGG | + | chr2_2:22012326-22012345 | None:intergenic | 20.0% |
| !! | AACATATTCTATTACTCTAA+AGG | - | chr2_2:22012327-22012346 | Msa0244050:intron | 20.0% |
| !! | GATATAAATTTCGTGTAATT+TGG | + | chr2_2:22012790-22012809 | None:intergenic | 20.0% |
| !! | TTTATTGGAAATTAGAGTTT+GGG | + | chr2_2:22012969-22012988 | None:intergenic | 20.0% |
| !! | AATTTCCAATAAACTTTCAA+AGG | - | chr2_2:22012976-22012995 | Msa0244050:intron | 20.0% |
| !! | ATTTCCAATAAACTTTCAAA+GGG | - | chr2_2:22012977-22012996 | Msa0244050:intron | 20.0% |
| !!! | GCAATTTATTTAAAATTACG+CGG | - | chr2_2:22013769-22013788 | Msa0244050:CDS | 20.0% |
| !!! | CAATTTATTTAAAATTACGC+GGG | - | chr2_2:22013770-22013789 | Msa0244050:CDS | 20.0% |
| !! | GAAAATCATCTAAAGTTTCT+GGG | + | chr2_2:22010261-22010280 | None:intergenic | 25.0% |
| ! | GAAAGAACATAAGAATATGA+AGG | - | chr2_2:22010429-22010448 | Msa0244050:intron | 25.0% |
| ! | ATGAAGGTTATGATAACTAT+CGG | - | chr2_2:22010445-22010464 | Msa0244050:intron | 25.0% |
| ! | TAAATATCCATTCAATCCTA+AGG | - | chr2_2:22010480-22010499 | Msa0244050:intron | 25.0% |
| ! | AGTTATTAAACATCTCAAGA+AGG | - | chr2_2:22010690-22010709 | Msa0244050:intron | 25.0% |
| !!! | TTATTTTATTTCAGATCAGC+AGG | + | chr2_2:22011076-22011095 | None:intergenic | 25.0% |
| ! | ATGATTAAACAGTATAAACC+CGG | + | chr2_2:22011205-22011224 | None:intergenic | 25.0% |
| ! | AAAGTAGAGAATTCTAAGTA+TGG | + | chr2_2:22011872-22011891 | None:intergenic | 25.0% |
| ! | ATGAGTAAATTTCCTATCAT+TGG | + | chr2_2:22011895-22011914 | None:intergenic | 25.0% |
| !!! | TCATAAATGATTTGTTCCAA+TGG | - | chr2_2:22011911-22011930 | Msa0244050:intron | 25.0% |
| ! | AATATACACTATGGTAGTAT+AGG | - | chr2_2:22011967-22011986 | Msa0244050:intron | 25.0% |
| !! | AAATATGCTTATGGTAATGT+AGG | + | chr2_2:22012221-22012240 | None:intergenic | 25.0% |
| !!! | AGAATATGTTTTGGTACATT+AGG | + | chr2_2:22012317-22012336 | None:intergenic | 25.0% |
| ! | ATAACTTTCTCTCTATAACT+TGG | + | chr2_2:22012675-22012694 | None:intergenic | 25.0% |
| !! | GAAAGTTATTACCATTTTAG+TGG | - | chr2_2:22012686-22012705 | Msa0244050:intron | 25.0% |
| !! | ACGTTTAATTTACTTCAGTT+TGG | + | chr2_2:22012812-22012831 | None:intergenic | 25.0% |
| !!! | AATTTAATTAGCTTTGTTGC+TGG | + | chr2_2:22012924-22012943 | None:intergenic | 25.0% |
| ! | TTAAATTTGAGAGTCTTACT+AGG | - | chr2_2:22012937-22012956 | Msa0244050:intron | 25.0% |
| ! | GTTTATTGGAAATTAGAGTT+TGG | + | chr2_2:22012970-22012989 | None:intergenic | 25.0% |
| ! | TAACTAGAGAAGTTAGTAAT+TGG | + | chr2_2:22013041-22013060 | None:intergenic | 25.0% |
| !!! | CACTCTAAAATACTAAACTA+TGG | - | chr2_2:22013388-22013407 | Msa0244050:intron | 25.0% |
| ! | AAACTCATTCTTAAAACCAA+AGG | + | chr2_2:22013430-22013449 | None:intergenic | 25.0% |
| !! | GAATGAGTTTGAGAAATTTT+TGG | - | chr2_2:22013440-22013459 | Msa0244050:intron | 25.0% |
| !! | AGAACGGAAATAATTTTCAA+AGG | + | chr2_2:22013732-22013751 | None:intergenic | 25.0% |
| ! | TCTCTACAATCAACTAATAA+CGG | - | chr2_2:22013844-22013863 | Msa0244050:intron | 25.0% |
| !!! | AATCAACTAATAACGGATTA+CGG | - | chr2_2:22013851-22013870 | Msa0244050:intron | 25.0% |
| ! | GGAAAATCATCTAAAGTTTC+TGG | + | chr2_2:22010262-22010281 | None:intergenic | 30.0% |
| ! | TCATCATTGATGATATCAAC+AGG | + | chr2_2:22010283-22010302 | None:intergenic | 30.0% |
| AATCAATTCCACTTCATTCT+AGG | - | chr2_2:22010307-22010326 | Msa0244050:CDS | 30.0% | |
| GTATAAAGATGGAAAAGGAA+CGG | - | chr2_2:22010345-22010364 | Msa0244050:CDS | 30.0% | |
| TATAAAGATGGAAAAGGAAC+GGG | - | chr2_2:22010346-22010365 | Msa0244050:CDS | 30.0% | |
| !!! | TGTGTTTGAACACTTTTTCT+GGG | + | chr2_2:22010408-22010427 | None:intergenic | 30.0% |
| !!! | TTGTGTTTGAACACTTTTTC+TGG | + | chr2_2:22010409-22010428 | None:intergenic | 30.0% |
| ! | TTTTTCTCCTTAGGATTGAA+TGG | + | chr2_2:22010490-22010509 | None:intergenic | 30.0% |
| ATTCAATCCTAAGGAGAAAA+AGG | - | chr2_2:22010489-22010508 | Msa0244050:intron | 30.0% | |
| !! | CATAGTTGATATCCATTTTG+TGG | + | chr2_2:22010801-22010820 | None:intergenic | 30.0% |
| ACGTCTTTATTATTAGACTC+AGG | + | chr2_2:22011705-22011724 | None:intergenic | 30.0% | |
| TTTCTGATACTAACCTATTC+AGG | - | chr2_2:22011752-22011771 | Msa0244050:intron | 30.0% | |
| ATTCTCTACTTTCCAATGAT+AGG | - | chr2_2:22011880-22011899 | Msa0244050:intron | 30.0% | |
| ! | GTTTAGAGTAAATTAGCCAT+TGG | + | chr2_2:22011930-22011949 | None:intergenic | 30.0% |
| !! | AGTGATATAATGGTTTGGTT+TGG | + | chr2_2:22012059-22012078 | None:intergenic | 30.0% |
| !!! | TATTTTAGAGTACACTAGCA+AGG | - | chr2_2:22012255-22012274 | Msa0244050:intron | 30.0% |
| !!! | ATTTTAGAGTACACTAGCAA+GGG | - | chr2_2:22012256-22012275 | Msa0244050:intron | 30.0% |
| GCATAATTTAACTACCCAAA+GGG | - | chr2_2:22012349-22012368 | Msa0244050:intron | 30.0% | |
| TAGTTAGAAAACTTCCCTTT+GGG | + | chr2_2:22012366-22012385 | None:intergenic | 30.0% | |
| TTAGTTAGAAAACTTCCCTT+TGG | + | chr2_2:22012367-22012386 | None:intergenic | 30.0% | |
| ! | AGGGAAGTTTTCTAACTAAA+AGG | - | chr2_2:22012368-22012387 | Msa0244050:intron | 30.0% |
| GTTTATATTGTTCAAGAGCT+TGG | + | chr2_2:22012412-22012431 | None:intergenic | 30.0% | |
| ! | AATTAAACTGTTGCGGTTTT+GGG | + | chr2_2:22012496-22012515 | None:intergenic | 30.0% |
| GATGATGAATTAAACTGTTG+CGG | + | chr2_2:22012503-22012522 | None:intergenic | 30.0% | |
| ATTCATCATCACTAGAATCT+CGG | - | chr2_2:22012513-22012532 | Msa0244050:intron | 30.0% | |
| ! | TCAAGTGATTTTTGATGCTA+TGG | + | chr2_2:22012650-22012669 | None:intergenic | 30.0% |
| TTTCTGCTGGAAAATTGTTA+CGG | + | chr2_2:22012728-22012747 | None:intergenic | 30.0% | |
| TCCCATAATTTCACAAGTTT+AGG | - | chr2_2:22012844-22012863 | Msa0244050:intron | 30.0% | |
| GCCTAAACTTGTGAAATTAT+GGG | + | chr2_2:22012848-22012867 | None:intergenic | 30.0% | |
| AGCCTAAACTTGTGAAATTA+TGG | + | chr2_2:22012849-22012868 | None:intergenic | 30.0% | |
| !! | TTTTTCAGTGGAATTTCGTA+TGG | + | chr2_2:22012900-22012919 | None:intergenic | 30.0% |
| ! | TGAACCCTTTGAAAGTTTAT+TGG | + | chr2_2:22012984-22013003 | None:intergenic | 30.0% |
| TAGAGAAGTTAGTAATTGGA+AGG | + | chr2_2:22013037-22013056 | None:intergenic | 30.0% | |
| TTTATGATTGAAATGGCTGA+TGG | + | chr2_2:22013102-22013121 | None:intergenic | 30.0% | |
| ! | TGTATTGATATATTGCAGCA+AGG | + | chr2_2:22013234-22013253 | None:intergenic | 30.0% |
| !!! | TATATGGTTTTGATGGTGTA+TGG | + | chr2_2:22013259-22013278 | None:intergenic | 30.0% |
| !!! | ACATGTGTATATGGTTTTGA+TGG | + | chr2_2:22013266-22013285 | None:intergenic | 30.0% |
| ! | TCTAATGGATAAGGAATGAA+TGG | - | chr2_2:22013512-22013531 | Msa0244050:intron | 30.0% |
| AACGGACATGAGAAATTAAA+TGG | + | chr2_2:22013652-22013671 | None:intergenic | 30.0% | |
| ! | ATTTAATTTCTCATGTCCGT+TGG | - | chr2_2:22013651-22013670 | Msa0244050:CDS | 30.0% |
| TTCTCGTATTACTATTCCAA+CGG | + | chr2_2:22013670-22013689 | None:intergenic | 30.0% | |
| ATTGAGAAATCGACGATATT+TGG | + | chr2_2:22013698-22013717 | None:intergenic | 30.0% | |
| TTATCAGTTACATGTCAGAA+CGG | + | chr2_2:22013748-22013767 | None:intergenic | 30.0% | |
| CAATCAAACTATATCCTCAA+AGG | - | chr2_2:22013808-22013827 | Msa0244050:intron | 30.0% | |
| GAGGTGTATAAAGATGGAAA+AGG | - | chr2_2:22010340-22010359 | Msa0244050:CDS | 35.0% | |
| AAGGTTATGATAACTATCGG+AGG | - | chr2_2:22010448-22010467 | Msa0244050:intron | 35.0% | |
| TGAATGGATATTTAGTGCCA+TGG | + | chr2_2:22010474-22010493 | None:intergenic | 35.0% | |
| ATCCTAAGGAGAAAAAGGTA+TGG | - | chr2_2:22010494-22010513 | Msa0244050:intron | 35.0% | |
| ! | ATCCATACCTTTTTCTCCTT+AGG | + | chr2_2:22010499-22010518 | None:intergenic | 35.0% |
| TACCTTGTCAATGATGATTC+TGG | - | chr2_2:22010568-22010587 | Msa0244050:intron | 35.0% | |
| TACCAGAATCATCATTGACA+AGG | + | chr2_2:22010573-22010592 | None:intergenic | 35.0% | |
| !! | TATATCGATTCTAGTGTGAC+TGG | - | chr2_2:22010640-22010659 | Msa0244050:intron | 35.0% |
| !! | ATATCGATTCTAGTGTGACT+GGG | - | chr2_2:22010641-22010660 | Msa0244050:intron | 35.0% |
| ! | AATAACTTGTCCAATGCAGT+TGG | + | chr2_2:22010677-22010696 | None:intergenic | 35.0% |
| TAAGCATGTATCCAAATCCA+TGG | - | chr2_2:22010714-22010733 | Msa0244050:intron | 35.0% | |
| CCAAAACAATTTGTGGTAGT+GGG | + | chr2_2:22010776-22010795 | None:intergenic | 35.0% | |
| ! | CCACTACCACAAATTGTTTT+GGG | - | chr2_2:22010774-22010793 | Msa0244050:intron | 35.0% |
| !!! | ATTGTTTTGGGACCACAAAA+TGG | - | chr2_2:22010786-22010805 | Msa0244050:intron | 35.0% |
| ATGTGCGTTAAACTTAGTAC+TGG | - | chr2_2:22010872-22010891 | Msa0244050:intron | 35.0% | |
| TTGCTATCTGAATACATGTC+TGG | - | chr2_2:22010962-22010981 | Msa0244050:intron | 35.0% | |
| TCTCTAAACTTAACCCATTC+CGG | - | chr2_2:22011183-22011202 | Msa0244050:intron | 35.0% | |
| AAACAGTATAAACCCGGAAT+GGG | + | chr2_2:22011199-22011218 | None:intergenic | 35.0% | |
| TAAACAGTATAAACCCGGAA+TGG | + | chr2_2:22011200-22011219 | None:intergenic | 35.0% | |
| ATCATGCATAAATGAGCGAT+CGG | - | chr2_2:22011220-22011239 | Msa0244050:intron | 35.0% | |
| ! | TGATTTTACGGAATAAACCC+AGG | - | chr2_2:22011373-22011392 | Msa0244050:intron | 35.0% |
| ! | TACTAACCTATTCAGGTTCT+AGG | - | chr2_2:22011759-22011778 | Msa0244050:intron | 35.0% |
| TGTCATATGCCATTCCTAAA+AGG | - | chr2_2:22011790-22011809 | Msa0244050:intron | 35.0% | |
| ! | TATGGTAATGTAGGAGTTAG+AGG | + | chr2_2:22012212-22012231 | None:intergenic | 35.0% |
| GGCATAATTTAACTACCCAA+AGG | - | chr2_2:22012348-22012367 | Msa0244050:intron | 35.0% | |
| ATTGTTCAAGAGCTTGGAAT+AGG | + | chr2_2:22012406-22012425 | None:intergenic | 35.0% | |
| ! | GAATTAAACTGTTGCGGTTT+TGG | + | chr2_2:22012497-22012516 | None:intergenic | 35.0% |
| !!! | GAGATGGTTTTGAAGTATGA+GGG | + | chr2_2:22012561-22012580 | None:intergenic | 35.0% |
| AATACCAGTTTCACGAATTC+TGG | + | chr2_2:22012601-22012620 | None:intergenic | 35.0% | |
| ! | GGAAAATTGTTACGGGTTTT+GGG | + | chr2_2:22012720-22012739 | None:intergenic | 35.0% |
| ! | TGGAAAATTGTTACGGGTTT+TGG | + | chr2_2:22012721-22012740 | None:intergenic | 35.0% |
| TTCTGCTGGAAAATTGTTAC+GGG | + | chr2_2:22012727-22012746 | None:intergenic | 35.0% | |
| !! | TTTGTTGCTGGATTTTTCAG+TGG | + | chr2_2:22012912-22012931 | None:intergenic | 35.0% |
| ATGTGAGTTCTCTAGTAAGT+TGG | + | chr2_2:22013133-22013152 | None:intergenic | 35.0% | |
| CAACATGTCACATGTGTATA+TGG | + | chr2_2:22013275-22013294 | None:intergenic | 35.0% | |
| AAAATCCAACCTAGAGAGAA+AGG | - | chr2_2:22013310-22013329 | Msa0244050:intron | 35.0% | |
| AAATCCAACCTAGAGAGAAA+GGG | - | chr2_2:22013311-22013330 | Msa0244050:intron | 35.0% | |
| TGCTTGTATGTTGAATCCTT+TGG | - | chr2_2:22013411-22013430 | Msa0244050:intron | 35.0% | |
| !!! | TGAGAAATTTTTGGTGAGTG+AGG | - | chr2_2:22013449-22013468 | Msa0244050:intron | 35.0% |
| !!! | GAGAAATTTTTGGTGAGTGA+GGG | - | chr2_2:22013450-22013469 | Msa0244050:intron | 35.0% |
| !!! | AGAAATTTTTGGTGAGTGAG+GGG | - | chr2_2:22013451-22013470 | Msa0244050:intron | 35.0% |
| !! | GGAGTGTTTTCTAATGGATA+AGG | - | chr2_2:22013503-22013522 | Msa0244050:intron | 35.0% |
| TGGAAAGAATGAGAGAGAAA+AGG | - | chr2_2:22013532-22013551 | Msa0244050:intron | 35.0% | |
| GGAAAGAATGAGAGAGAAAA+GGG | - | chr2_2:22013533-22013552 | Msa0244050:intron | 35.0% | |
| AAATGGTTACGAATTAACCG+AGG | + | chr2_2:22013635-22013654 | None:intergenic | 35.0% | |
| GTTCTGACATGTAACTGATA+AGG | - | chr2_2:22013747-22013766 | Msa0244050:CDS | 35.0% | |
| ATCATCAAACTCATCCTTTG+AGG | + | chr2_2:22013825-22013844 | None:intergenic | 35.0% | |
| ! | TTACGGTGAGCTTAAACTTT+TGG | - | chr2_2:22013868-22013887 | Msa0244050:intron | 35.0% |
| TCCATCTTTATACACCTCAG+TGG | + | chr2_2:22010338-22010357 | None:intergenic | 40.0% | |
| GATATGTCTGATCGAGCTTA+TGG | + | chr2_2:22010530-22010549 | None:intergenic | 40.0% | |
| CATCAATTATGCTAGTGCAG+TGG | + | chr2_2:22010600-22010619 | None:intergenic | 40.0% | |
| CACTGCACTAGCATAATTGA+TGG | - | chr2_2:22010598-22010617 | Msa0244050:intron | 40.0% | |
| !! | TATCGATTCTAGTGTGACTG+GGG | - | chr2_2:22010642-22010661 | Msa0244050:intron | 40.0% |
| GGACACATATTCCATGGATT+TGG | + | chr2_2:22010728-22010747 | None:intergenic | 40.0% | |
| AGCAATGGACACATATTCCA+TGG | + | chr2_2:22010734-22010753 | None:intergenic | 40.0% | |
| ! | CCCACTACCACAAATTGTTT+TGG | - | chr2_2:22010773-22010792 | Msa0244050:intron | 40.0% |
| CCCAAAACAATTTGTGGTAG+TGG | + | chr2_2:22010777-22010796 | None:intergenic | 40.0% | |
| TGTGGTCCCAAAACAATTTG+TGG | + | chr2_2:22010783-22010802 | None:intergenic | 40.0% | |
| GGGTTAAGTTTAGAGACAGA+TGG | + | chr2_2:22011179-22011198 | None:intergenic | 40.0% | |
| CTCTAAACTTAACCCATTCC+GGG | - | chr2_2:22011184-22011203 | Msa0244050:intron | 40.0% | |
| TCATGCATAAATGAGCGATC+GGG | - | chr2_2:22011221-22011240 | Msa0244050:intron | 40.0% | |
| ! | TTTTACGGAATAAACCCAGG+TGG | - | chr2_2:22011376-22011395 | Msa0244050:intron | 40.0% |
| TCAGAGTGGAATAAATTCCG+GGG | + | chr2_2:22011407-22011426 | None:intergenic | 40.0% | |
| GTCAGAGTGGAATAAATTCC+GGG | + | chr2_2:22011408-22011427 | None:intergenic | 40.0% | |
| GGTCAGAGTGGAATAAATTC+CGG | + | chr2_2:22011409-22011428 | None:intergenic | 40.0% | |
| GGAATTTATTCCACTCTGAC+CGG | - | chr2_2:22011408-22011427 | Msa0244050:intron | 40.0% | |
| GAAATTAATACCGGTCAGAG+TGG | + | chr2_2:22011421-22011440 | None:intergenic | 40.0% | |
| GACCGGTATTAATTTCCAAC+TGG | - | chr2_2:22011425-22011444 | Msa0244050:intron | 40.0% | |
| CGCCAGTTGGAAATTAATAC+CGG | + | chr2_2:22011430-22011449 | None:intergenic | 40.0% | |
| CGGTATTAATTTCCAACTGG+CGG | - | chr2_2:22011428-22011447 | Msa0244050:intron | 40.0% | |
| GGTATTAATTTCCAACTGGC+GGG | - | chr2_2:22011429-22011448 | Msa0244050:intron | 40.0% | |
| GATATGCCTAGAACCTGAAT+AGG | + | chr2_2:22011768-22011787 | None:intergenic | 40.0% | |
| CTATGGTAGTATAGGATCAG+AGG | - | chr2_2:22011975-22011994 | Msa0244050:intron | 40.0% | |
| CTCCAACAATTCTCACTTTC+CGG | - | chr2_2:22012126-22012145 | Msa0244050:intron | 40.0% | |
| TTCCGGAAAGTGAGAATTGT+TGG | + | chr2_2:22012131-22012150 | None:intergenic | 40.0% | |
| TGCAATTTCGGCTAACATTC+CGG | + | chr2_2:22012148-22012167 | None:intergenic | 40.0% | |
| !!! | GGAGATGGTTTTGAAGTATG+AGG | + | chr2_2:22012562-22012581 | None:intergenic | 40.0% |
| TTGAAGTTGTGGATTTCTGC+TGG | + | chr2_2:22012741-22012760 | None:intergenic | 40.0% | |
| ! | AGAAAGTGCGTTTGAAGTTG+TGG | + | chr2_2:22012752-22012771 | None:intergenic | 40.0% |
| GTAAGCAACATGGGAGAAAA+AGG | + | chr2_2:22013013-22013032 | None:intergenic | 40.0% | |
| TTGGAAGGAGTAAGCAACAT+GGG | + | chr2_2:22013022-22013041 | None:intergenic | 40.0% | |
| ATTGGAAGGAGTAAGCAACA+TGG | + | chr2_2:22013023-22013042 | None:intergenic | 40.0% | |
| GAACTCACATGCTTAAGAGT+TGG | - | chr2_2:22013143-22013162 | Msa0244050:intron | 40.0% | |
| ! | AGGAGTGAAGAAAGTGCAAA+GGG | + | chr2_2:22013214-22013233 | None:intergenic | 40.0% |
| ! | AAGGAGTGAAGAAAGTGCAA+AGG | + | chr2_2:22013215-22013234 | None:intergenic | 40.0% |
| AATCCAACCTAGAGAGAAAG+GGG | - | chr2_2:22013312-22013331 | Msa0244050:intron | 40.0% | |
| AGAAGAAGAGATGAGGGAAA+TGG | - | chr2_2:22013478-22013497 | Msa0244050:intron | 40.0% | |
| !!! | ATGGTGGGAGTGTTTTCTAA+TGG | - | chr2_2:22013497-22013516 | Msa0244050:intron | 40.0% |
| AAGAATGAGAGAGAAAAGGG+AGG | - | chr2_2:22013536-22013555 | Msa0244050:intron | 40.0% | |
| AATGACCAAAATGCCCTTCA+AGG | - | chr2_2:22013593-22013612 | Msa0244050:CDS | 40.0% | |
| ATGACCAAAATGCCCTTCAA+GGG | - | chr2_2:22013594-22013613 | Msa0244050:CDS | 40.0% | |
| !!! | TTTTCCCTTGAAGGGCATTT+TGG | + | chr2_2:22013601-22013620 | None:intergenic | 40.0% |
| ! | ATCACGTCTTTTCCCTTGAA+GGG | + | chr2_2:22013609-22013628 | None:intergenic | 40.0% |
| ! | AATCACGTCTTTTCCCTTGA+AGG | + | chr2_2:22013610-22013629 | None:intergenic | 40.0% |
| GGAAAAGACGTGATTATCCT+CGG | - | chr2_2:22013615-22013634 | Msa0244050:CDS | 40.0% | |
| CATCTTAGTATCAGCTGGAT+CGG | + | chr2_2:22013906-22013925 | None:intergenic | 40.0% | |
| TGATACTAAGATGAACCGAG+AGG | - | chr2_2:22013913-22013932 | Msa0244050:CDS | 40.0% | |
| ATCAACAGCAAATCACTCCT+TGG | - | chr2_2:22013962-22013981 | Msa0244050:CDS | 40.0% | |
| ! | CACTCCTTGGACTTTTTGTT+TGG | - | chr2_2:22013975-22013994 | Msa0244050:CDS | 40.0% |
| CACTCCAAACAAAAAGTCCA+AGG | + | chr2_2:22013982-22014001 | None:intergenic | 40.0% | |
| AGCATTTCCTCCAAGATGTA+AGG | + | chr2_2:22014043-22014062 | None:intergenic | 40.0% | |
| GCCACTGAGGTGTATAAAGA+TGG | - | chr2_2:22010334-22010353 | Msa0244050:CDS | 45.0% | |
| ATGATAACTATCGGAGGCCA+TGG | - | chr2_2:22010454-22010473 | Msa0244050:intron | 45.0% | |
| !! | ACAATTTGTGGTAGTGGGCT+TGG | + | chr2_2:22010771-22010790 | None:intergenic | 45.0% |
| TTCCACCTATCCTAGGTTGT+AGG | - | chr2_2:22011130-22011149 | Msa0244050:intron | 45.0% | |
| GATTGCCTACAACCTAGGAT+AGG | + | chr2_2:22011138-22011157 | None:intergenic | 45.0% | |
| CTAGGTTGTAGGCAATCACA+GGG | - | chr2_2:22011141-22011160 | Msa0244050:intron | 45.0% | |
| CATGCATAAATGAGCGATCG+GGG | - | chr2_2:22011222-22011241 | Msa0244050:intron | 45.0% | |
| ATGCATAAATGAGCGATCGG+GGG | - | chr2_2:22011223-22011242 | Msa0244050:intron | 45.0% | |
| CCATGACAATAAGAGGAGTC+CGG | + | chr2_2:22011474-22011493 | None:intergenic | 45.0% | |
| CGGACTCCTCTTATTGTCAT+GGG | - | chr2_2:22011472-22011491 | Msa0244050:intron | 45.0% | |
| GGACTCCTCTTATTGTCATG+GGG | - | chr2_2:22011473-22011492 | Msa0244050:intron | 45.0% | |
| GATGACCCCATGACAATAAG+AGG | + | chr2_2:22011481-22011500 | None:intergenic | 45.0% | |
| TTGTCATGGGGTCATCCTTA+CGG | - | chr2_2:22011485-22011504 | Msa0244050:intron | 45.0% | |
| AACCTTTCGTATCCAACTGG+CGG | - | chr2_2:22011532-22011551 | Msa0244050:intron | 45.0% | |
| ATCCTCAACTCCACTACTGA+CGG | - | chr2_2:22011626-22011645 | Msa0244050:intron | 45.0% | |
| CAAGAGCTTGGAATAGGATG+AGG | + | chr2_2:22012400-22012419 | None:intergenic | 45.0% | |
| CCAGTTATGAAGTCTGGAGA+TGG | + | chr2_2:22012577-22012596 | None:intergenic | 45.0% | |
| CCATCTCCAGACTTCATAAC+TGG | - | chr2_2:22012574-22012593 | Msa0244050:intron | 45.0% | |
| TCTGGTCCAGTTATGAAGTC+TGG | + | chr2_2:22012583-22012602 | None:intergenic | 45.0% | |
| TGGACCAGAATTCGTGAAAC+TGG | - | chr2_2:22012594-22012613 | Msa0244050:intron | 45.0% | |
| !!! | TTGTTACGGGTTTTGGGACA+GGG | + | chr2_2:22012714-22012733 | None:intergenic | 45.0% |
| !!! | ATTGTTACGGGTTTTGGGAC+AGG | + | chr2_2:22012715-22012734 | None:intergenic | 45.0% |
| AGTGCAAAGGGCAGTATCTT+GGG | + | chr2_2:22013202-22013221 | None:intergenic | 45.0% | |
| AAGTGCAAAGGGCAGTATCT+TGG | + | chr2_2:22013203-22013222 | None:intergenic | 45.0% | |
| ATTCCCCTTTCTCTCTAGGT+TGG | + | chr2_2:22013318-22013337 | None:intergenic | 45.0% | |
| AACCTAGAGAGAAAGGGGAA+TGG | - | chr2_2:22013317-22013336 | Msa0244050:intron | 45.0% | |
| ATCCATTCCCCTTTCTCTCT+AGG | + | chr2_2:22013322-22013341 | None:intergenic | 45.0% | |
| AGAGAGAAAGGGGAATGGAT+CGG | - | chr2_2:22013322-22013341 | Msa0244050:intron | 45.0% | |
| AGAAGAGATGAGGGAAATGG+TGG | - | chr2_2:22013481-22013500 | Msa0244050:intron | 45.0% | |
| GAAGAGATGAGGGAAATGGT+GGG | - | chr2_2:22013482-22013501 | Msa0244050:intron | 45.0% | |
| GAGAGAGAAAAGGGAGGATT+TGG | - | chr2_2:22013542-22013561 | Msa0244050:intron | 45.0% | |
| ! | GGTGAGCTTAAACTTTTGGC+AGG | - | chr2_2:22013872-22013891 | Msa0244050:CDS | 45.0% |
| CGGTTCATCTTAGTATCAGC+TGG | + | chr2_2:22013911-22013930 | None:intergenic | 45.0% | |
| !! | AACCGAGAGGTGTTCATTGA+GGG | - | chr2_2:22013926-22013945 | Msa0244050:CDS | 45.0% |
| TAAGGCTCGATGTCATTGCT+CGG | + | chr2_2:22014025-22014044 | None:intergenic | 45.0% | |
| TGACATCGAGCCTTACATCT+TGG | - | chr2_2:22014030-22014049 | Msa0244050:CDS | 45.0% | |
| TGGCGAAGCCTAGAATGAAG+TGG | + | chr2_2:22010318-22010337 | None:intergenic | 50.0% | |
| ! | GCTGACTTCTCCAACTGCAT+TGG | - | chr2_2:22010664-22010683 | Msa0244050:intron | 50.0% |
| !! | ATTTGTGGTAGTGGGCTTGG+AGG | + | chr2_2:22010768-22010787 | None:intergenic | 50.0% |
| TGGCAAGGAGACAATACAGG+AGG | + | chr2_2:22011046-22011065 | None:intergenic | 50.0% | |
| ACGTGGCAAGGAGACAATAC+AGG | + | chr2_2:22011049-22011068 | None:intergenic | 50.0% | |
| TCAGATCAGCAGGTTGTACG+TGG | + | chr2_2:22011066-22011085 | None:intergenic | 50.0% | |
| TAAAAGGGATTGGGGTGCGA+CGG | - | chr2_2:22011093-22011112 | Msa0244050:intron | 50.0% | |
| CAGTGAGTTCCACCTATCCT+AGG | - | chr2_2:22011123-22011142 | Msa0244050:intron | 50.0% | |
| TGCCTACAACCTAGGATAGG+TGG | + | chr2_2:22011135-22011154 | None:intergenic | 50.0% | |
| CCTGTGATTGCCTACAACCT+AGG | + | chr2_2:22011143-22011162 | None:intergenic | 50.0% | |
| CCTAGGTTGTAGGCAATCAC+AGG | - | chr2_2:22011140-22011159 | Msa0244050:intron | 50.0% | |
| TAGGCAATCACAGGGAACCT+AGG | - | chr2_2:22011149-22011168 | Msa0244050:intron | 50.0% | |
| TAGAGACAGATGGCGATCCT+AGG | + | chr2_2:22011169-22011188 | None:intergenic | 50.0% | |
| CCGGACTCCTCTTATTGTCA+TGG | - | chr2_2:22011471-22011490 | Msa0244050:intron | 50.0% | |
| GGGAACCTTTCGTATCCAAC+TGG | - | chr2_2:22011529-22011548 | Msa0244050:intron | 50.0% | |
| ACCTTTCGTATCCAACTGGC+GGG | - | chr2_2:22011533-22011552 | Msa0244050:intron | 50.0% | |
| TCCTCAACTCCACTACTGAC+GGG | - | chr2_2:22011627-22011646 | Msa0244050:intron | 50.0% | |
| TCTTCACCTCTGCCTCTAGT+CGG | - | chr2_2:22012455-22012474 | Msa0244050:intron | 50.0% | |
| TTTGTTGGAGGACCGACTAG+AGG | + | chr2_2:22012470-22012489 | None:intergenic | 50.0% | |
| !!! | GGTTTTGGGCTGTTTGTTGG+AGG | + | chr2_2:22012482-22012501 | None:intergenic | 50.0% |
| !!! | TGCGGTTTTGGGCTGTTTGT+TGG | + | chr2_2:22012485-22012504 | None:intergenic | 50.0% |
| !! | GGGGTTCTGATTTTGCAGCT+TGG | + | chr2_2:22013182-22013201 | None:intergenic | 50.0% |
| GTGCAAAGGGCAGTATCTTG+GGG | + | chr2_2:22013201-22013220 | None:intergenic | 50.0% | |
| AACAGAGGGTGAGAGAGGAA+GGG | - | chr2_2:22013347-22013366 | Msa0244050:intron | 50.0% | |
| GGCGTGAGAAGAAGAGATGA+GGG | - | chr2_2:22013472-22013491 | Msa0244050:intron | 50.0% | |
| !! | GAACCGAGAGGTGTTCATTG+AGG | - | chr2_2:22013925-22013944 | Msa0244050:CDS | 50.0% |
| CATCGAGCCTTACATCTTGG+AGG | - | chr2_2:22014033-22014052 | Msa0244050:CDS | 50.0% | |
| CATTCTAGGCTTCGCCACTG+AGG | - | chr2_2:22010321-22010340 | Msa0244050:CDS | 55.0% | |
| CGGGACATTTCGTTCGCGAT+TGG | - | chr2_2:22010365-22010384 | Msa0244050:CDS | 55.0% | |
| TCAGCAGGTTGTACGTGGCA+AGG | + | chr2_2:22011061-22011080 | None:intergenic | 55.0% | |
| AAAAGGGATTGGGGTGCGAC+GGG | - | chr2_2:22011094-22011113 | Msa0244050:intron | 55.0% | |
| TGAGCGATCGGGGGATAACT+AGG | - | chr2_2:22011232-22011251 | Msa0244050:intron | 55.0% | |
| AAACCCAGGTGGAGTAACCC+CGG | - | chr2_2:22011387-22011406 | Msa0244050:intron | 55.0% | |
| ATTCCGGGGTTACTCCACCT+GGG | + | chr2_2:22011393-22011412 | None:intergenic | 55.0% | |
| AATTCCGGGGTTACTCCACC+TGG | + | chr2_2:22011394-22011413 | None:intergenic | 55.0% | |
| AACCCAACTGACGGGGATAC+CGG | - | chr2_2:22011452-22011471 | Msa0244050:intron | 55.0% | |
| TGGAACGGGCACTATCCGTA+AGG | + | chr2_2:22011503-22011522 | None:intergenic | 55.0% | |
| ATAGTGCCCGTTCCAACTGG+CGG | - | chr2_2:22011508-22011527 | Msa0244050:intron | 55.0% | |
| AAGGTTCCCGCCAGTTGGAA+CGG | + | chr2_2:22011518-22011537 | None:intergenic | 55.0% | |
| TACGAAAGGTTCCCGCCAGT+TGG | + | chr2_2:22011523-22011542 | None:intergenic | 55.0% | |
| TCCCGCCAGTTGGATACGAA+AGG | + | chr2_2:22011537-22011556 | None:intergenic | 55.0% | |
| CTTTCGCTATTCCCGCCAGT+TGG | + | chr2_2:22011547-22011566 | None:intergenic | 55.0% | |
| CCTCAACTCCACTACTGACG+GGG | - | chr2_2:22011628-22011647 | Msa0244050:intron | 55.0% | |
| CTCTAGATCCCCGTCAGTAG+TGG | + | chr2_2:22011639-22011658 | None:intergenic | 55.0% | |
| CTACTGACGGGGATCTAGAG+AGG | - | chr2_2:22011639-22011658 | Msa0244050:intron | 55.0% | |
| GGGACAGGGCTCCACTAAAA+TGG | + | chr2_2:22012700-22012719 | None:intergenic | 55.0% | |
| GGAATGGATCGGCCAACAGA+GGG | - | chr2_2:22013333-22013352 | Msa0244050:intron | 55.0% | |
| CTTCCTCTCTCACCCTCTGT+TGG | + | chr2_2:22013348-22013367 | None:intergenic | 55.0% | |
| CAACAGAGGGTGAGAGAGGA+AGG | - | chr2_2:22013346-22013365 | Msa0244050:intron | 55.0% | |
| ACAGAGGGTGAGAGAGGAAG+GGG | - | chr2_2:22013348-22013367 | Msa0244050:intron | 55.0% | |
| GGGCGTGAGAAGAAGAGATG+AGG | - | chr2_2:22013471-22013490 | Msa0244050:intron | 55.0% | |
| CGCCCTCAATGAACACCTCT+CGG | + | chr2_2:22013931-22013950 | None:intergenic | 55.0% | |
| ! | GATGTCATTGCTCGGTGGGT+TGG | + | chr2_2:22014017-22014036 | None:intergenic | 55.0% |
| GCTCGATGTCATTGCTCGGT+GGG | + | chr2_2:22014021-22014040 | None:intergenic | 55.0% | |
| GAGGAGCTCTGTCGGAGCAA+TGG | + | chr2_2:22010749-22010768 | None:intergenic | 60.0% | |
| TGGGCTTGGAGGAGCTCTGT+CGG | + | chr2_2:22010757-22010776 | None:intergenic | 60.0% | |
| TCAGTTGGGTTCCCGCCAGT+TGG | + | chr2_2:22011443-22011462 | None:intergenic | 60.0% | |
| ACTGGCGGGAACCCAACTGA+CGG | - | chr2_2:22011443-22011462 | Msa0244050:intron | 60.0% | |
| GTCCGGTATCCCCGTCAGTT+GGG | + | chr2_2:22011457-22011476 | None:intergenic | 60.0% | |
| AGTCCGGTATCCCCGTCAGT+TGG | + | chr2_2:22011458-22011477 | None:intergenic | 60.0% | |
| CGGATAGTGCCCGTTCCAAC+TGG | - | chr2_2:22011505-22011524 | Msa0244050:intron | 60.0% | |
| TAGTGCCCGTTCCAACTGGC+GGG | - | chr2_2:22011509-22011528 | Msa0244050:intron | 60.0% | |
| AGGTTCCCGCCAGTTGGAAC+GGG | + | chr2_2:22011517-22011536 | None:intergenic | 60.0% | |
| ! | CCCCGTCAGTAGTGGAGTTG+AGG | + | chr2_2:22011631-22011650 | None:intergenic | 60.0% |
| CAGAGGTGAAGAGCAGTGGC+TGG | + | chr2_2:22012447-22012466 | None:intergenic | 60.0% | |
| GAGGCAGAGGTGAAGAGCAG+TGG | + | chr2_2:22012451-22012470 | None:intergenic | 60.0% | |
| GGGAATGGATCGGCCAACAG+AGG | - | chr2_2:22013332-22013351 | Msa0244050:intron | 60.0% | |
| GGCTCGATGTCATTGCTCGG+TGG | + | chr2_2:22014022-22014041 | None:intergenic | 60.0% | |
| CTGGCGGGAACCCAACTGAC+GGG | - | chr2_2:22011444-22011463 | Msa0244050:intron | 65.0% | |
| TGGCGGGAACCCAACTGACG+GGG | - | chr2_2:22011445-22011464 | Msa0244050:intron | 65.0% | |
| GGAGGACCGACTAGAGGCAG+AGG | + | chr2_2:22012464-22012483 | None:intergenic | 65.0% | |
| CGGCCAACAGAGGGTGAGAG+AGG | - | chr2_2:22013342-22013361 | Msa0244050:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 22010238 | 22014084 | 22010238 | ID=Msa0244050;Name=Msa0244050 |
| chr2_2 | mRNA | 22010238 | 22014084 | 22010238 | ID=Msa0244050-mRNA-1;Parent=Msa0244050;Name=Msa0244050-mRNA-1;_AED=0.39;_eAED=0.39;_QI=0|0|0|1|0|0|3|0|210 |
| chr2_2 | exon | 22013872 | 22014084 | 22013872 | ID=Msa0244050-mRNA-1:exon:8583;Parent=Msa0244050-mRNA-1 |
| chr2_2 | exon | 22013579 | 22013811 | 22013579 | ID=Msa0244050-mRNA-1:exon:8582;Parent=Msa0244050-mRNA-1 |
| chr2_2 | exon | 22010238 | 22010421 | 22010238 | ID=Msa0244050-mRNA-1:exon:8581;Parent=Msa0244050-mRNA-1 |
| chr2_2 | CDS | 22013872 | 22014084 | 22013872 | ID=Msa0244050-mRNA-1:cds;Parent=Msa0244050-mRNA-1 |
| chr2_2 | CDS | 22013579 | 22013811 | 22013579 | ID=Msa0244050-mRNA-1:cds;Parent=Msa0244050-mRNA-1 |
| chr2_2 | CDS | 22010238 | 22010421 | 22010238 | ID=Msa0244050-mRNA-1:cds;Parent=Msa0244050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
