Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0255560 | XP_039686634.1 | 99.257 | 673 | 5 | 0 | 1 | 673 | 1 | 673 | 0.0 | 1379 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0255560 | sp|Q9C6I8|NOG1_ARATH | 76.844 | 678 | 145 | 5 | 1 | 673 | 1 | 671 | 0.0 | 1068 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0255560 | A0A396JEX7 | 99.257 | 673 | 5 | 0 | 1 | 673 | 1 | 673 | 0.0 | 1379 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0027260 | Msa0255560 | 0.806017 | 1.008998e-49 | -8.615850e-47 |
| Msa0188690 | Msa0255560 | 0.817171 | 3.787726e-52 | -8.615850e-47 |
| Msa0255560 | Msa0292400 | 0.806772 | 6.993204e-50 | -8.615850e-47 |
| Msa0255560 | Msa0307850 | 0.828310 | 9.653545e-55 | -8.615850e-47 |
| Msa0255560 | Msa0435370 | 0.805193 | 1.502259e-49 | -8.615850e-47 |
| Msa0255560 | Msa0435420 | 0.818024 | 2.432301e-52 | -8.615850e-47 |
| Msa0255560 | Msa0576690 | 0.800041 | 1.736096e-48 | -8.615850e-47 |
| Msa0255560 | Msa0790400 | 0.824968 | 6.052556e-54 | -8.615850e-47 |
| Msa0255560 | Msa1218140 | 0.801358 | 9.349847e-49 | -8.615850e-47 |
| Msa0255560 | Msa1258710 | 0.802141 | 6.459552e-49 | -8.615850e-47 |
| Msa0255560 | Msa1411500 | 0.804947 | 1.691437e-49 | -8.615850e-47 |
| Msa0255560 | Msa1443300 | 0.826475 | 2.657621e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0255560 | MtrunA17_Chr2g0316271 | 99.257 | 673 | 5 | 0 | 1 | 673 | 1 | 673 | 0.0 | 1379 |
| Msa0255560 | MtrunA17_Chr8g0342681 | 99.108 | 673 | 6 | 0 | 1 | 673 | 1 | 673 | 0.0 | 1378 |
| Msa0255560 | MtrunA17_Chr7g0233051 | 28.387 | 310 | 195 | 5 | 62 | 361 | 136 | 428 | 1.35e-30 | 125 |
| Msa0255560 | MtrunA17_Chr2g0319171 | 61.607 | 112 | 37 | 3 | 566 | 673 | 39 | 148 | 4.34e-28 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0255560 | AT1G50920.1 | 76.844 | 678 | 145 | 5 | 1 | 673 | 1 | 671 | 0.0 | 1068 |
| Msa0255560 | AT1G10300.3 | 70.147 | 680 | 174 | 6 | 1 | 673 | 30 | 687 | 0.0 | 930 |
| Msa0255560 | AT1G10300.1 | 70.147 | 680 | 174 | 6 | 1 | 673 | 30 | 687 | 0.0 | 930 |
| Msa0255560 | AT1G10300.2 | 70.147 | 680 | 174 | 6 | 1 | 673 | 1 | 658 | 0.0 | 929 |
| Msa0255560 | AT1G80770.4 | 25.967 | 362 | 256 | 4 | 6 | 365 | 76 | 427 | 1.94e-30 | 125 |
| Msa0255560 | AT1G80770.3 | 27.241 | 290 | 206 | 2 | 6 | 293 | 69 | 355 | 4.20e-30 | 124 |
| Msa0255560 | AT1G80770.1 | 27.241 | 290 | 206 | 2 | 6 | 293 | 92 | 378 | 5.03e-30 | 124 |
| Msa0255560 | AT1G80770.2 | 28.448 | 232 | 166 | 0 | 62 | 293 | 51 | 282 | 5.21e-30 | 122 |
| Msa0255560 | AT1G80770.5 | 25.967 | 362 | 256 | 4 | 6 | 365 | 107 | 458 | 7.19e-30 | 124 |
| Msa0255560 | AT1G80770.6 | 25.967 | 362 | 256 | 4 | 6 | 365 | 123 | 474 | 1.92e-29 | 122 |
| Msa0255560 | AT3G23860.1 | 36.757 | 185 | 100 | 6 | 6 | 179 | 6 | 184 | 6.25e-20 | 89.7 |
| Msa0255560 | AT3G23860.3 | 36.757 | 185 | 100 | 6 | 6 | 179 | 19 | 197 | 9.15e-20 | 89.7 |
| Msa0255560 | AT3G23860.2 | 36.757 | 185 | 100 | 6 | 6 | 179 | 19 | 197 | 9.15e-20 | 89.7 |
Find 167 sgRNAs with CRISPR-Local
Find 370 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATACAAGTGCTTTGGTTTA+AGG | 0.090617 | 2_2:-49679143 | None:intergenic |
| GGCATTCTTGTTTCTCTTCT+TGG | 0.113775 | 2_2:-49679088 | None:intergenic |
| CATTGATACACCTGGGATTT+TGG | 0.122171 | 2_2:+49677838 | Msa0255560:CDS |
| AGATAATCTGCCAGAAATTT+TGG | 0.147637 | 2_2:+49678507 | Msa0255560:CDS |
| ATCAAAATAGTCCTGGTATT+TGG | 0.197584 | 2_2:-49677677 | None:intergenic |
| TTGTTCTTCTTGGATATATC+AGG | 0.214420 | 2_2:+49677935 | Msa0255560:CDS |
| TTGTTCCTGGAGAAGGTCTT+AGG | 0.215303 | 2_2:+49679019 | Msa0255560:CDS |
| AATACTGCTAGGAATCTTAT+TGG | 0.238602 | 2_2:+49677479 | Msa0255560:CDS |
| TGGTCCGAGTTTGGCGTATT+TGG | 0.244369 | 2_2:+49677613 | Msa0255560:CDS |
| TTGTGACCATCCAAAATTTC+TGG | 0.250913 | 2_2:-49678517 | None:intergenic |
| TCCTTCTGGTCACGTGGTTT+CGG | 0.274078 | 2_2:-49678316 | None:intergenic |
| CCTTTATCAACAAGATTACT+AGG | 0.281811 | 2_2:+49677729 | Msa0255560:CDS |
| AGCGGCAATATTGTTCTTCT+TGG | 0.291223 | 2_2:+49677925 | Msa0255560:CDS |
| ATAATGCTTTCTCAAATTCA+TGG | 0.310089 | 2_2:-49678458 | None:intergenic |
| TCTTGGGCTTGATCCTTCTA+TGG | 0.315254 | 2_2:+49678825 | Msa0255560:CDS |
| ATCCCATCGTTTCTTCCTTC+TGG | 0.317491 | 2_2:-49678907 | None:intergenic |
| TCGATGAGTTTCCTCGTCTT+GGG | 0.323523 | 2_2:+49677378 | Msa0255560:CDS |
| TTTGAGAAAGCATTATATTC+TGG | 0.326466 | 2_2:+49678465 | Msa0255560:CDS |
| GCTAAAGCCTCTTGCTGTTC+CGG | 0.334792 | 2_2:-49678661 | None:intergenic |
| GTAGATCACTGTCTCGTTCC+AGG | 0.336726 | 2_2:+49678971 | Msa0255560:CDS |
| AAGGATCTGGAGGAAGAAAA+TGG | 0.337588 | 2_2:+49678418 | Msa0255560:CDS |
| TACACGGAGGTCTTTCCTTC+TGG | 0.338390 | 2_2:-49678330 | None:intergenic |
| TGAAGCAGATCACCATAAAA+AGG | 0.341915 | 2_2:-49677410 | None:intergenic |
| CCTAGTAATCTTGTTGATAA+AGG | 0.346637 | 2_2:-49677729 | None:intergenic |
| TGTTTGAAGGTTGCTGCTCT+TGG | 0.354411 | 2_2:+49677563 | Msa0255560:CDS |
| GGAAGGCAGCTGTCGTCTCT+TGG | 0.361895 | 2_2:+49678808 | Msa0255560:CDS |
| TATGTTAAGTTGCTTAAGTA+TGG | 0.368634 | 2_2:+49677518 | Msa0255560:CDS |
| AAACCAAAGCACTTGTATAC+TGG | 0.371562 | 2_2:+49679147 | Msa0255560:CDS |
| GTGAAATTGCATAGCCTTTG+TGG | 0.373188 | 2_2:-49677283 | None:intergenic |
| TAAGAGGATTGGTCCGAGTT+TGG | 0.377873 | 2_2:+49677604 | Msa0255560:CDS |
| GTCGATGAGTTTCCTCGTCT+TGG | 0.379104 | 2_2:+49677377 | Msa0255560:CDS |
| TGGATATATCAGGGTCTTGT+GGG | 0.379230 | 2_2:+49677945 | Msa0255560:CDS |
| TCCACCCTATGTAGAATGTC+AGG | 0.383879 | 2_2:-49678559 | None:intergenic |
| TGGAAAGAGAGGAAGGGTTA+AGG | 0.386417 | 2_2:+49678587 | Msa0255560:CDS |
| TACCACTAAGTCGCTGTTTG+TGG | 0.397916 | 2_2:+49677781 | Msa0255560:CDS |
| CCACCACATGAAGTTGTTCC+TGG | 0.400337 | 2_2:+49679006 | Msa0255560:CDS |
| GTTTGAAGGTTGCTGCTCTT+GGG | 0.414727 | 2_2:+49677564 | Msa0255560:CDS |
| ATATTCTGGCTGATGATGAT+TGG | 0.429551 | 2_2:+49678479 | Msa0255560:CDS |
| TTGGATATATCAGGGTCTTG+TGG | 0.430521 | 2_2:+49677944 | Msa0255560:CDS |
| ACCCACAAACAGCGACTTAG+TGG | 0.433204 | 2_2:-49677783 | None:intergenic |
| GAGTTTGGCGTATTTGGAAC+AGG | 0.435961 | 2_2:+49677619 | Msa0255560:CDS |
| AAGAGGCTTTAGCTGAGATT+AGG | 0.440739 | 2_2:+49678671 | Msa0255560:CDS |
| ACCACTAAGTCGCTGTTTGT+GGG | 0.442566 | 2_2:+49677782 | Msa0255560:CDS |
| GAAGCGTTGAAGACTTCAAT+TGG | 0.448210 | 2_2:+49678118 | Msa0255560:CDS |
| GAAGAGTTGGAAAGAGAGGA+AGG | 0.448886 | 2_2:+49678580 | Msa0255560:CDS |
| GAAGGCAGCTGTCGTCTCTT+GGG | 0.448895 | 2_2:+49678809 | Msa0255560:CDS |
| TTTCCAGTATACAAGTGCTT+TGG | 0.449917 | 2_2:-49679150 | None:intergenic |
| GGAACAGGTTAGGCAGCATA+TGG | 0.451534 | 2_2:+49677634 | Msa0255560:CDS |
| GCAGTTCACAACAGAAAGAA+TGG | 0.457219 | 2_2:+49678786 | Msa0255560:CDS |
| AAGGAACTCTTCCCCACATT+CGG | 0.460165 | 2_2:-49677710 | None:intergenic |
| GTCGCTGTTTGTGGGTCATA+CGG | 0.461201 | 2_2:+49677790 | Msa0255560:CDS |
| TTGCTGTTCCGGTGTCAATT+CGG | 0.461815 | 2_2:-49678650 | None:intergenic |
| GCGCCTGTCTGTCTTTCCGT+TGG | 0.461936 | 2_2:-49679178 | None:intergenic |
| AAATCAACGACTGTCTGAAC+AGG | 0.462069 | 2_2:+49678278 | Msa0255560:CDS |
| GGTGGAAGAGTTGGAAAGAG+AGG | 0.462216 | 2_2:+49678576 | Msa0255560:CDS |
| CTGAGACGCTGTTTCTTGCT+AGG | 0.462261 | 2_2:-49678949 | None:intergenic |
| GGATGTGTACTGTGCTTAAG+AGG | 0.463986 | 2_2:+49677588 | Msa0255560:CDS |
| ACGAGGAAACTCATCGACTA+TGG | 0.466798 | 2_2:-49677372 | None:intergenic |
| TGGCGTATTTGGAACAGGTT+AGG | 0.466876 | 2_2:+49677624 | Msa0255560:CDS |
| ACGGATTTGCAGCCGTTGGA+TGG | 0.469771 | 2_2:+49678052 | Msa0255560:CDS |
| TCGAATTTCCTTGAAACGGT+TGG | 0.471228 | 2_2:-49678754 | None:intergenic |
| AGAGCCGACCAACCGTTTCA+AGG | 0.471571 | 2_2:+49678746 | Msa0255560:CDS |
| ATTCTGTTAATAGCCATAGA+AGG | 0.473599 | 2_2:-49678838 | None:intergenic |
| CAAGGAAATTCGACAAGGAC+AGG | 0.474490 | 2_2:+49678764 | Msa0255560:CDS |
| ATCTGAGGAGGATATGAAGT+TGG | 0.474944 | 2_2:+49678078 | Msa0255560:CDS |
| CTTGTCGAATTTCCTTGAAA+CGG | 0.475481 | 2_2:-49678758 | None:intergenic |
| CTGGTATTTGGATCAATTGA+AGG | 0.475786 | 2_2:-49677665 | None:intergenic |
| AAGATCACTGTGGTACCAAA+TGG | 0.476500 | 2_2:+49677203 | Msa0255560:CDS |
| TGTTCCTGGAGAAGGTCTTA+GGG | 0.484064 | 2_2:+49679020 | Msa0255560:CDS |
| GTATCGTTGCAAGTGTTTGA+AGG | 0.497261 | 2_2:+49677550 | Msa0255560:CDS |
| AACAACTTCATGTGGTGGGC+GGG | 0.497263 | 2_2:-49679001 | None:intergenic |
| TGGGTATACTATTGCTCAGC+AGG | 0.498609 | 2_2:+49677964 | Msa0255560:CDS |
| ATAATATTCCGATCCTCAAA+CGG | 0.499586 | 2_2:-49677866 | None:intergenic |
| CTTTAGCTTCCAAAACTGCC+GGG | 0.505469 | 2_2:-49678357 | None:intergenic |
| TCTACATAGGGTGGAAGAGT+TGG | 0.506957 | 2_2:+49678567 | Msa0255560:CDS |
| TCATCTTAATCTCAACCCTC+TGG | 0.510875 | 2_2:-49678246 | None:intergenic |
| CGGATTTGCAGCCGTTGGAT+GGG | 0.512181 | 2_2:+49678053 | Msa0255560:CDS |
| TCTATCAGCTTCTCCACGCT+TGG | 0.514227 | 2_2:-49679109 | None:intergenic |
| TGGATAGGCCGTTTGAGGAT+CGG | 0.514877 | 2_2:+49677858 | Msa0255560:CDS |
| GCTTTAGCTTCCAAAACTGC+CGG | 0.515588 | 2_2:-49678358 | None:intergenic |
| AGGCTTTAGCTGAGATTAGG+AGG | 0.525671 | 2_2:+49678674 | Msa0255560:CDS |
| GATTTGTGGGTATCCGAATG+TGG | 0.531335 | 2_2:+49677697 | Msa0255560:CDS |
| GATCATTACAAGCTTGCACT+TGG | 0.533978 | 2_2:+49677449 | Msa0255560:CDS |
| TTGAAGACTTCAATTGGTCA+TGG | 0.534533 | 2_2:+49678124 | Msa0255560:CDS |
| CATGAAGTTGTTCCTGGAGA+AGG | 0.537410 | 2_2:+49679012 | Msa0255560:CDS |
| CATCTAGGAAAGGTCGGAAG+AGG | 0.537520 | 2_2:+49678875 | Msa0255560:CDS |
| AGCTAAGCAAGCAGCTGCTG+AGG | 0.538394 | 2_2:+49678378 | Msa0255560:CDS |
| CAGTTCACAACAGAAAGAAT+GGG | 0.538822 | 2_2:+49678787 | Msa0255560:CDS |
| TGTTCTTCTTGGATATATCA+GGG | 0.539338 | 2_2:+49677936 | Msa0255560:CDS |
| CTGGTTCAGCAATCTCTCAC+AGG | 0.539812 | 2_2:-49678227 | None:intergenic |
| GAGGAAGAAAATGGAGGTGC+TGG | 0.545405 | 2_2:+49678427 | Msa0255560:CDS |
| TTGACCCTGACATTCTACAT+AGG | 0.545444 | 2_2:+49678554 | Msa0255560:CDS |
| CAAGACGGATTTGCAGCCGT+TGG | 0.545784 | 2_2:+49678048 | Msa0255560:CDS |
| GCTCCAACGGAAAGACAGAC+AGG | 0.546765 | 2_2:+49679175 | Msa0255560:CDS |
| ATTTCCTTGAAACGGTTGGT+CGG | 0.548211 | 2_2:-49678750 | None:intergenic |
| GACTTAGTGGTAAACGCATA+CGG | 0.548539 | 2_2:-49677770 | None:intergenic |
| TGAAGGTTGCTGCTCTTGGG+AGG | 0.548846 | 2_2:+49677567 | Msa0255560:CDS |
| CCCACAAATCAAAATAGTCC+TGG | 0.549797 | 2_2:-49677684 | None:intergenic |
| CTTTATCAACAAGATTACTA+GGG | 0.552134 | 2_2:+49677730 | Msa0255560:CDS |
| TATCAAGTCATTGATACACC+TGG | 0.555673 | 2_2:+49677830 | Msa0255560:CDS |
| CAAAGCAATTAAACTTGCGA+AGG | 0.557324 | 2_2:+49679059 | Msa0255560:CDS |
| TGGTGGGCGGGAGACCGACC+TGG | 0.559000 | 2_2:-49678989 | None:intergenic |
| GGAAGGGTTAAGGCAGGCAG+AGG | 0.559674 | 2_2:+49678597 | Msa0255560:CDS |
| AAGAGAGGAAGGGTTAAGGC+AGG | 0.562461 | 2_2:+49678591 | Msa0255560:CDS |
| CGATGAGTTTCCTCGTCTTG+GGG | 0.563653 | 2_2:+49677379 | Msa0255560:CDS |
| TTCAATTGGTCATGGAGGCG+AGG | 0.565252 | 2_2:+49678132 | Msa0255560:CDS |
| TGTACTGTGCTTAAGAGGAT+TGG | 0.566698 | 2_2:+49677593 | Msa0255560:CDS |
| TCAATTGGTCATGGAGGCGA+GGG | 0.568070 | 2_2:+49678133 | Msa0255560:CDS |
| ATGAGTGCGTTGACTGAAGA+AGG | 0.569510 | 2_2:+49678181 | Msa0255560:CDS |
| TTCTTCAGTCAACGCACTCA+TGG | 0.570366 | 2_2:-49678179 | None:intergenic |
| CCAGGAACAACTTCATGTGG+TGG | 0.570925 | 2_2:-49679006 | None:intergenic |
| TTGTTGCACACAACAATCAA+AGG | 0.572095 | 2_2:-49678028 | None:intergenic |
| GGTCTTTCCTTCTGGTCACG+TGG | 0.574635 | 2_2:-49678322 | None:intergenic |
| TGACCCTGACATTCTACATA+GGG | 0.576210 | 2_2:+49678555 | Msa0255560:CDS |
| CTTCAATTGATCCAAATACC+AGG | 0.577769 | 2_2:+49677666 | Msa0255560:CDS |
| ATTTGTGGGTATCCGAATGT+GGG | 0.581651 | 2_2:+49677698 | Msa0255560:CDS |
| TGTTCCAAATACGCCAAACT+CGG | 0.584896 | 2_2:-49677617 | None:intergenic |
| TCCGAAACCACGTGACCAGA+AGG | 0.588470 | 2_2:+49678315 | Msa0255560:CDS |
| AACGGCCTATCCAAAATCCC+AGG | 0.591191 | 2_2:-49677848 | None:intergenic |
| GAATCCCTAAGACCTTCTCC+AGG | 0.592367 | 2_2:-49679024 | None:intergenic |
| TATACTGGAAAGCGCTCCAA+CGG | 0.594583 | 2_2:+49679162 | Msa0255560:CDS |
| AAGACCTCCGTGTATTCCCC+CGG | 0.595257 | 2_2:+49678339 | Msa0255560:CDS |
| TTTAGCTTCCAAAACTGCCG+GGG | 0.602297 | 2_2:-49678356 | None:intergenic |
| ATTGACACCGGAACAGCAAG+AGG | 0.604651 | 2_2:+49678654 | Msa0255560:CDS |
| CAGGAACAACTTCATGTGGT+GGG | 0.604752 | 2_2:-49679005 | None:intergenic |
| TGCTCTTGCGCATTTGAGAG+CGG | 0.605421 | 2_2:+49677907 | Msa0255560:CDS |
| AAGAGTTGGAAAGAGAGGAA+GGG | 0.605706 | 2_2:+49678581 | Msa0255560:CDS |
| GCCGTTGGATGGGTTATCTG+AGG | 0.607275 | 2_2:+49678063 | Msa0255560:CDS |
| CCCTGACATTCTACATAGGG+TGG | 0.608061 | 2_2:+49678558 | Msa0255560:CDS |
| TCACCAGAAGGAAGAAACGA+TGG | 0.608184 | 2_2:+49678904 | Msa0255560:CDS |
| ATCACTGTCTCGTTCCAGGT+CGG | 0.608845 | 2_2:+49678975 | Msa0255560:CDS |
| GCTTCATGTGCTCTATAACA+AGG | 0.610047 | 2_2:+49677427 | Msa0255560:CDS |
| TTGGTCAGATTAATACTGCT+AGG | 0.610371 | 2_2:+49677468 | Msa0255560:CDS |
| TCCTCAGATAACCCATCCAA+CGG | 0.612445 | 2_2:-49678064 | None:intergenic |
| AGAAGGAAGAAACGATGGGA+TGG | 0.612953 | 2_2:+49678909 | Msa0255560:CDS |
| GAACAACTTCATGTGGTGGG+CGG | 0.613605 | 2_2:-49679002 | None:intergenic |
| CACCAGAAGGAAGAAACGAT+GGG | 0.615415 | 2_2:+49678905 | Msa0255560:CDS |
| TGCGTAGCAGATCTGCATCT+AGG | 0.616314 | 2_2:+49678860 | Msa0255560:CDS |
| AGGTTAGGCAGCATATGGCT+AGG | 0.618497 | 2_2:+49677639 | Msa0255560:CDS |
| GTGAGAGATTGCTGAACCAG+AGG | 0.624481 | 2_2:+49678230 | Msa0255560:CDS |
| ATCAAGTCATTGATACACCT+GGG | 0.625389 | 2_2:+49677831 | Msa0255560:CDS |
| AGCAGATCTGCATCTAGGAA+AGG | 0.625927 | 2_2:+49678865 | Msa0255560:CDS |
| AAAGCAATTAAACTTGCGAA+GGG | 0.631135 | 2_2:+49679060 | Msa0255560:CDS |
| CCACCCTATGTAGAATGTCA+GGG | 0.631460 | 2_2:-49678558 | None:intergenic |
| ATCTAGGAAAGGTCGGAAGA+GGG | 0.633227 | 2_2:+49678876 | Msa0255560:CDS |
| AGAAACAAGAATGCCAAGCG+TGG | 0.633691 | 2_2:+49679096 | Msa0255560:CDS |
| TAGCCTTTGTGGACAACAGT+TGG | 0.638716 | 2_2:-49677272 | None:intergenic |
| GATCTGCATCTAGGAAAGGT+CGG | 0.639204 | 2_2:+49678869 | Msa0255560:CDS |
| GTTGGATGGGTTATCTGAGG+AGG | 0.639325 | 2_2:+49678066 | Msa0255560:CDS |
| GGATGAATGTCCCCAAGACG+AGG | 0.644458 | 2_2:-49677389 | None:intergenic |
| TCTCCAGGAACAACTTCATG+TGG | 0.646313 | 2_2:-49679009 | None:intergenic |
| ACACCAACTGTTGTCCACAA+AGG | 0.647881 | 2_2:+49677269 | Msa0255560:CDS |
| GATTGTTGTGTGCAACAAGA+CGG | 0.648959 | 2_2:+49678033 | Msa0255560:CDS |
| GTATTCTAATCCAACAACAT+CGG | 0.653178 | 2_2:+49678704 | Msa0255560:CDS |
| GTATACTATTGCTCAGCAGG+CGG | 0.653456 | 2_2:+49677967 | Msa0255560:CDS |
| AGATGGAACCGAATTGACAC+CGG | 0.653798 | 2_2:+49678642 | Msa0255560:CDS |
| AAGAGGGAGAGATCACCAGA+AGG | 0.653816 | 2_2:+49678892 | Msa0255560:CDS |
| CGTTTCAAGGAAATTCGACA+AGG | 0.654192 | 2_2:+49678759 | Msa0255560:CDS |
| TTAGCTTCCAAAACTGCCGG+GGG | 0.654804 | 2_2:-49678355 | None:intergenic |
| TCACAACAGAAAGAATGGGA+AGG | 0.666061 | 2_2:+49678791 | Msa0255560:CDS |
| AAGACTTCAATTGGTCATGG+AGG | 0.674587 | 2_2:+49678127 | Msa0255560:CDS |
| TGAGAGATTGCTGAACCAGA+GGG | 0.687755 | 2_2:+49678231 | Msa0255560:CDS |
| CAATTGGTCATGGAGGCGAG+GGG | 0.696407 | 2_2:+49678134 | Msa0255560:CDS |
| GACTGAAGAAGGTGTGATTG+CGG | 0.713697 | 2_2:+49678192 | Msa0255560:CDS |
| TTTGTGGGTATCCGAATGTG+GGG | 0.723190 | 2_2:+49677699 | Msa0255560:CDS |
| GATCTGGAGGAAGAAAATGG+AGG | 0.764738 | 2_2:+49678421 | Msa0255560:CDS |
| CAATTTCAAGAAGATCACTG+TGG | 0.830107 | 2_2:+49677193 | Msa0255560:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATGTTAAGTTGCTTAAGTA+TGG | + | chr2_2:49677518-49677537 | Msa0255560:CDS | 25.0% |
| ! | CTTTATCAACAAGATTACTA+GGG | + | chr2_2:49677730-49677749 | Msa0255560:CDS | 25.0% |
| ! | ATAATGCTTTCTCAAATTCA+TGG | - | chr2_2:49678461-49678480 | None:intergenic | 25.0% |
| !!! | TTTGAGAAAGCATTATATTC+TGG | + | chr2_2:49678465-49678484 | Msa0255560:CDS | 25.0% |
| !! | TATGTTAAGTTGCTTAAGTA+TGG | + | chr2_2:49677518-49677537 | Msa0255560:CDS | 25.0% |
| ! | CTTTATCAACAAGATTACTA+GGG | + | chr2_2:49677730-49677749 | Msa0255560:CDS | 25.0% |
| ! | ATAATGCTTTCTCAAATTCA+TGG | - | chr2_2:49678461-49678480 | None:intergenic | 25.0% |
| !!! | TTTGAGAAAGCATTATATTC+TGG | + | chr2_2:49678465-49678484 | Msa0255560:CDS | 25.0% |
| ! | TCAACGAAATCTTTTCCATT+TGG | - | chr2_2:49677221-49677240 | None:intergenic | 30.0% |
| !! | CTTTTCGTGAAAATTAGTCT+GGG | - | chr2_2:49677345-49677364 | None:intergenic | 30.0% |
| AATACTGCTAGGAATCTTAT+TGG | + | chr2_2:49677479-49677498 | Msa0255560:CDS | 30.0% | |
| ATCAAAATAGTCCTGGTATT+TGG | - | chr2_2:49677680-49677699 | None:intergenic | 30.0% | |
| ! | CCTAGTAATCTTGTTGATAA+AGG | - | chr2_2:49677732-49677751 | None:intergenic | 30.0% |
| CCTTTATCAACAAGATTACT+AGG | + | chr2_2:49677729-49677748 | Msa0255560:CDS | 30.0% | |
| ATAATATTCCGATCCTCAAA+CGG | - | chr2_2:49677869-49677888 | None:intergenic | 30.0% | |
| TTGTTCTTCTTGGATATATC+AGG | + | chr2_2:49677935-49677954 | Msa0255560:CDS | 30.0% | |
| TGTTCTTCTTGGATATATCA+GGG | + | chr2_2:49677936-49677955 | Msa0255560:CDS | 30.0% | |
| ! | AGATAATCTGCCAGAAATTT+TGG | + | chr2_2:49678507-49678526 | Msa0255560:CDS | 30.0% |
| !!! | GATGATGATTTTGAGATAGA+TGG | + | chr2_2:49678625-49678644 | Msa0255560:CDS | 30.0% |
| GTATTCTAATCCAACAACAT+CGG | + | chr2_2:49678704-49678723 | Msa0255560:CDS | 30.0% | |
| ! | TCTTTTTAATCCGATGTTGT+TGG | - | chr2_2:49678717-49678736 | None:intergenic | 30.0% |
| ATTCTGTTAATAGCCATAGA+AGG | - | chr2_2:49678841-49678860 | None:intergenic | 30.0% | |
| AAAGCAATTAAACTTGCGAA+GGG | + | chr2_2:49679060-49679079 | Msa0255560:CDS | 30.0% | |
| ! | TATACAAGTGCTTTGGTTTA+AGG | - | chr2_2:49679146-49679165 | None:intergenic | 30.0% |
| ! | TCAACGAAATCTTTTCCATT+TGG | - | chr2_2:49677221-49677240 | None:intergenic | 30.0% |
| !! | CTTTTCGTGAAAATTAGTCT+GGG | - | chr2_2:49677345-49677364 | None:intergenic | 30.0% |
| AATACTGCTAGGAATCTTAT+TGG | + | chr2_2:49677479-49677498 | Msa0255560:CDS | 30.0% | |
| ATCAAAATAGTCCTGGTATT+TGG | - | chr2_2:49677680-49677699 | None:intergenic | 30.0% | |
| ! | CCTAGTAATCTTGTTGATAA+AGG | - | chr2_2:49677732-49677751 | None:intergenic | 30.0% |
| CCTTTATCAACAAGATTACT+AGG | + | chr2_2:49677729-49677748 | Msa0255560:CDS | 30.0% | |
| ATAATATTCCGATCCTCAAA+CGG | - | chr2_2:49677869-49677888 | None:intergenic | 30.0% | |
| TTGTTCTTCTTGGATATATC+AGG | + | chr2_2:49677935-49677954 | Msa0255560:CDS | 30.0% | |
| TGTTCTTCTTGGATATATCA+GGG | + | chr2_2:49677936-49677955 | Msa0255560:CDS | 30.0% | |
| ! | AGATAATCTGCCAGAAATTT+TGG | + | chr2_2:49678507-49678526 | Msa0255560:CDS | 30.0% |
| !!! | GATGATGATTTTGAGATAGA+TGG | + | chr2_2:49678625-49678644 | Msa0255560:CDS | 30.0% |
| GTATTCTAATCCAACAACAT+CGG | + | chr2_2:49678704-49678723 | Msa0255560:CDS | 30.0% | |
| ! | TCTTTTTAATCCGATGTTGT+TGG | - | chr2_2:49678717-49678736 | None:intergenic | 30.0% |
| ATTCTGTTAATAGCCATAGA+AGG | - | chr2_2:49678841-49678860 | None:intergenic | 30.0% | |
| AAAGCAATTAAACTTGCGAA+GGG | + | chr2_2:49679060-49679079 | Msa0255560:CDS | 30.0% | |
| ! | TATACAAGTGCTTTGGTTTA+AGG | - | chr2_2:49679146-49679165 | None:intergenic | 30.0% |
| CAATTTCAAGAAGATCACTG+TGG | + | chr2_2:49677193-49677212 | Msa0255560:CDS | 35.0% | |
| ! | CTTTTCGCATGTAGAATTGT+CGG | - | chr2_2:49677313-49677332 | None:intergenic | 35.0% |
| ! | GCTTTTCGTGAAAATTAGTC+TGG | - | chr2_2:49677346-49677365 | None:intergenic | 35.0% |
| TGAAGCAGATCACCATAAAA+AGG | - | chr2_2:49677413-49677432 | None:intergenic | 35.0% | |
| TTGGTCAGATTAATACTGCT+AGG | + | chr2_2:49677468-49677487 | Msa0255560:CDS | 35.0% | |
| CTGGTATTTGGATCAATTGA+AGG | - | chr2_2:49677668-49677687 | None:intergenic | 35.0% | |
| CTTCAATTGATCCAAATACC+AGG | + | chr2_2:49677666-49677685 | Msa0255560:CDS | 35.0% | |
| !!! | ACCAGGACTATTTTGATTTG+TGG | + | chr2_2:49677683-49677702 | Msa0255560:CDS | 35.0% |
| !!! | CCAGGACTATTTTGATTTGT+GGG | + | chr2_2:49677684-49677703 | Msa0255560:CDS | 35.0% |
| TATCAAGTCATTGATACACC+TGG | + | chr2_2:49677830-49677849 | Msa0255560:CDS | 35.0% | |
| ATCAAGTCATTGATACACCT+GGG | + | chr2_2:49677831-49677850 | Msa0255560:CDS | 35.0% | |
| TTGTTGCACACAACAATCAA+AGG | - | chr2_2:49678031-49678050 | None:intergenic | 35.0% | |
| TTGAAGACTTCAATTGGTCA+TGG | + | chr2_2:49678124-49678143 | Msa0255560:CDS | 35.0% | |
| ! | ATATTCTGGCTGATGATGAT+TGG | + | chr2_2:49678479-49678498 | Msa0255560:CDS | 35.0% |
| ! | AATCTGCCAGAAATTTTGGA+TGG | + | chr2_2:49678511-49678530 | Msa0255560:CDS | 35.0% |
| TTGTGACCATCCAAAATTTC+TGG | - | chr2_2:49678520-49678539 | None:intergenic | 35.0% | |
| CTTGTCGAATTTCCTTGAAA+CGG | - | chr2_2:49678761-49678780 | None:intergenic | 35.0% | |
| CAGTTCACAACAGAAAGAAT+GGG | + | chr2_2:49678787-49678806 | Msa0255560:CDS | 35.0% | |
| CAAAGCAATTAAACTTGCGA+AGG | + | chr2_2:49679059-49679078 | Msa0255560:CDS | 35.0% | |
| ! | AAACCAAAGCACTTGTATAC+TGG | + | chr2_2:49679147-49679166 | Msa0255560:CDS | 35.0% |
| TTTCCAGTATACAAGTGCTT+TGG | - | chr2_2:49679153-49679172 | None:intergenic | 35.0% | |
| CAATTTCAAGAAGATCACTG+TGG | + | chr2_2:49677193-49677212 | Msa0255560:CDS | 35.0% | |
| ! | CTTTTCGCATGTAGAATTGT+CGG | - | chr2_2:49677313-49677332 | None:intergenic | 35.0% |
| ! | GCTTTTCGTGAAAATTAGTC+TGG | - | chr2_2:49677346-49677365 | None:intergenic | 35.0% |
| TGAAGCAGATCACCATAAAA+AGG | - | chr2_2:49677413-49677432 | None:intergenic | 35.0% | |
| TTGGTCAGATTAATACTGCT+AGG | + | chr2_2:49677468-49677487 | Msa0255560:CDS | 35.0% | |
| CTGGTATTTGGATCAATTGA+AGG | - | chr2_2:49677668-49677687 | None:intergenic | 35.0% | |
| CTTCAATTGATCCAAATACC+AGG | + | chr2_2:49677666-49677685 | Msa0255560:CDS | 35.0% | |
| !!! | ACCAGGACTATTTTGATTTG+TGG | + | chr2_2:49677683-49677702 | Msa0255560:CDS | 35.0% |
| !!! | CCAGGACTATTTTGATTTGT+GGG | + | chr2_2:49677684-49677703 | Msa0255560:CDS | 35.0% |
| TATCAAGTCATTGATACACC+TGG | + | chr2_2:49677830-49677849 | Msa0255560:CDS | 35.0% | |
| ATCAAGTCATTGATACACCT+GGG | + | chr2_2:49677831-49677850 | Msa0255560:CDS | 35.0% | |
| TTGTTGCACACAACAATCAA+AGG | - | chr2_2:49678031-49678050 | None:intergenic | 35.0% | |
| TTGAAGACTTCAATTGGTCA+TGG | + | chr2_2:49678124-49678143 | Msa0255560:CDS | 35.0% | |
| ! | ATATTCTGGCTGATGATGAT+TGG | + | chr2_2:49678479-49678498 | Msa0255560:CDS | 35.0% |
| ! | AATCTGCCAGAAATTTTGGA+TGG | + | chr2_2:49678511-49678530 | Msa0255560:CDS | 35.0% |
| TTGTGACCATCCAAAATTTC+TGG | - | chr2_2:49678520-49678539 | None:intergenic | 35.0% | |
| CTTGTCGAATTTCCTTGAAA+CGG | - | chr2_2:49678761-49678780 | None:intergenic | 35.0% | |
| CAGTTCACAACAGAAAGAAT+GGG | + | chr2_2:49678787-49678806 | Msa0255560:CDS | 35.0% | |
| CAAAGCAATTAAACTTGCGA+AGG | + | chr2_2:49679059-49679078 | Msa0255560:CDS | 35.0% | |
| ! | AAACCAAAGCACTTGTATAC+TGG | + | chr2_2:49679147-49679166 | Msa0255560:CDS | 35.0% |
| TTTCCAGTATACAAGTGCTT+TGG | - | chr2_2:49679153-49679172 | None:intergenic | 35.0% | |
| AAGATCACTGTGGTACCAAA+TGG | + | chr2_2:49677203-49677222 | Msa0255560:CDS | 40.0% | |
| GTGAAATTGCATAGCCTTTG+TGG | - | chr2_2:49677286-49677305 | None:intergenic | 40.0% | |
| ! | GGGGACATTCATCCTTTTTA+TGG | + | chr2_2:49677398-49677417 | Msa0255560:CDS | 40.0% |
| GCTTCATGTGCTCTATAACA+AGG | + | chr2_2:49677427-49677446 | Msa0255560:CDS | 40.0% | |
| GATCATTACAAGCTTGCACT+TGG | + | chr2_2:49677449-49677468 | Msa0255560:CDS | 40.0% | |
| GTATCGTTGCAAGTGTTTGA+AGG | + | chr2_2:49677550-49677569 | Msa0255560:CDS | 40.0% | |
| TGTACTGTGCTTAAGAGGAT+TGG | + | chr2_2:49677593-49677612 | Msa0255560:CDS | 40.0% | |
| TGTTCCAAATACGCCAAACT+CGG | - | chr2_2:49677620-49677639 | None:intergenic | 40.0% | |
| CCCACAAATCAAAATAGTCC+TGG | - | chr2_2:49677687-49677706 | None:intergenic | 40.0% | |
| ATTTGTGGGTATCCGAATGT+GGG | + | chr2_2:49677698-49677717 | Msa0255560:CDS | 40.0% | |
| GACTTAGTGGTAAACGCATA+CGG | - | chr2_2:49677773-49677792 | None:intergenic | 40.0% | |
| ! | CATTGATACACCTGGGATTT+TGG | + | chr2_2:49677838-49677857 | Msa0255560:CDS | 40.0% |
| ! | ATACACCTGGGATTTTGGAT+AGG | + | chr2_2:49677843-49677862 | Msa0255560:CDS | 40.0% |
| AGCGGCAATATTGTTCTTCT+TGG | + | chr2_2:49677925-49677944 | Msa0255560:CDS | 40.0% | |
| TTGGATATATCAGGGTCTTG+TGG | + | chr2_2:49677944-49677963 | Msa0255560:CDS | 40.0% | |
| ! | TGGATATATCAGGGTCTTGT+GGG | + | chr2_2:49677945-49677964 | Msa0255560:CDS | 40.0% |
| GATTGTTGTGTGCAACAAGA+CGG | + | chr2_2:49678033-49678052 | Msa0255560:CDS | 40.0% | |
| ATCTGAGGAGGATATGAAGT+TGG | + | chr2_2:49678078-49678097 | Msa0255560:CDS | 40.0% | |
| !! | GAAGCGTTGAAGACTTCAAT+TGG | + | chr2_2:49678118-49678137 | Msa0255560:CDS | 40.0% |
| AAGACTTCAATTGGTCATGG+AGG | + | chr2_2:49678127-49678146 | Msa0255560:CDS | 40.0% | |
| TCATCTTAATCTCAACCCTC+TGG | - | chr2_2:49678249-49678268 | None:intergenic | 40.0% | |
| AAATCAACGACTGTCTGAAC+AGG | + | chr2_2:49678278-49678297 | Msa0255560:CDS | 40.0% | |
| GGAGAAGAGAAAAACTGAGA+AGG | + | chr2_2:49678399-49678418 | Msa0255560:CDS | 40.0% | |
| GAGAAAAACTGAGAAGGATC+TGG | + | chr2_2:49678405-49678424 | Msa0255560:CDS | 40.0% | |
| AAAAACTGAGAAGGATCTGG+AGG | + | chr2_2:49678408-49678427 | Msa0255560:CDS | 40.0% | |
| AAGGATCTGGAGGAAGAAAA+TGG | + | chr2_2:49678418-49678437 | Msa0255560:CDS | 40.0% | |
| TTGACCCTGACATTCTACAT+AGG | + | chr2_2:49678554-49678573 | Msa0255560:CDS | 40.0% | |
| TGACCCTGACATTCTACATA+GGG | + | chr2_2:49678555-49678574 | Msa0255560:CDS | 40.0% | |
| AAGAGTTGGAAAGAGAGGAA+GGG | + | chr2_2:49678581-49678600 | Msa0255560:CDS | 40.0% | |
| ! | AAGAGGCTTTAGCTGAGATT+AGG | + | chr2_2:49678671-49678690 | Msa0255560:CDS | 40.0% |
| ATTTCCTTGAAACGGTTGGT+CGG | - | chr2_2:49678753-49678772 | None:intergenic | 40.0% | |
| TCGAATTTCCTTGAAACGGT+TGG | - | chr2_2:49678757-49678776 | None:intergenic | 40.0% | |
| CGTTTCAAGGAAATTCGACA+AGG | + | chr2_2:49678759-49678778 | Msa0255560:CDS | 40.0% | |
| GCAGTTCACAACAGAAAGAA+TGG | + | chr2_2:49678786-49678805 | Msa0255560:CDS | 40.0% | |
| TCACAACAGAAAGAATGGGA+AGG | + | chr2_2:49678791-49678810 | Msa0255560:CDS | 40.0% | |
| ! | GGCATTCTTGTTTCTCTTCT+TGG | - | chr2_2:49679091-49679110 | None:intergenic | 40.0% |
| AAGATCACTGTGGTACCAAA+TGG | + | chr2_2:49677203-49677222 | Msa0255560:CDS | 40.0% | |
| GTGAAATTGCATAGCCTTTG+TGG | - | chr2_2:49677286-49677305 | None:intergenic | 40.0% | |
| ! | GGGGACATTCATCCTTTTTA+TGG | + | chr2_2:49677398-49677417 | Msa0255560:CDS | 40.0% |
| GCTTCATGTGCTCTATAACA+AGG | + | chr2_2:49677427-49677446 | Msa0255560:CDS | 40.0% | |
| GATCATTACAAGCTTGCACT+TGG | + | chr2_2:49677449-49677468 | Msa0255560:CDS | 40.0% | |
| GTATCGTTGCAAGTGTTTGA+AGG | + | chr2_2:49677550-49677569 | Msa0255560:CDS | 40.0% | |
| TGTACTGTGCTTAAGAGGAT+TGG | + | chr2_2:49677593-49677612 | Msa0255560:CDS | 40.0% | |
| TGTTCCAAATACGCCAAACT+CGG | - | chr2_2:49677620-49677639 | None:intergenic | 40.0% | |
| CCCACAAATCAAAATAGTCC+TGG | - | chr2_2:49677687-49677706 | None:intergenic | 40.0% | |
| ATTTGTGGGTATCCGAATGT+GGG | + | chr2_2:49677698-49677717 | Msa0255560:CDS | 40.0% | |
| GACTTAGTGGTAAACGCATA+CGG | - | chr2_2:49677773-49677792 | None:intergenic | 40.0% | |
| ! | CATTGATACACCTGGGATTT+TGG | + | chr2_2:49677838-49677857 | Msa0255560:CDS | 40.0% |
| ! | ATACACCTGGGATTTTGGAT+AGG | + | chr2_2:49677843-49677862 | Msa0255560:CDS | 40.0% |
| AGCGGCAATATTGTTCTTCT+TGG | + | chr2_2:49677925-49677944 | Msa0255560:CDS | 40.0% | |
| TTGGATATATCAGGGTCTTG+TGG | + | chr2_2:49677944-49677963 | Msa0255560:CDS | 40.0% | |
| ! | TGGATATATCAGGGTCTTGT+GGG | + | chr2_2:49677945-49677964 | Msa0255560:CDS | 40.0% |
| GATTGTTGTGTGCAACAAGA+CGG | + | chr2_2:49678033-49678052 | Msa0255560:CDS | 40.0% | |
| ATCTGAGGAGGATATGAAGT+TGG | + | chr2_2:49678078-49678097 | Msa0255560:CDS | 40.0% | |
| !! | GAAGCGTTGAAGACTTCAAT+TGG | + | chr2_2:49678118-49678137 | Msa0255560:CDS | 40.0% |
| AAGACTTCAATTGGTCATGG+AGG | + | chr2_2:49678127-49678146 | Msa0255560:CDS | 40.0% | |
| TCATCTTAATCTCAACCCTC+TGG | - | chr2_2:49678249-49678268 | None:intergenic | 40.0% | |
| AAATCAACGACTGTCTGAAC+AGG | + | chr2_2:49678278-49678297 | Msa0255560:CDS | 40.0% | |
| GGAGAAGAGAAAAACTGAGA+AGG | + | chr2_2:49678399-49678418 | Msa0255560:CDS | 40.0% | |
| GAGAAAAACTGAGAAGGATC+TGG | + | chr2_2:49678405-49678424 | Msa0255560:CDS | 40.0% | |
| AAAAACTGAGAAGGATCTGG+AGG | + | chr2_2:49678408-49678427 | Msa0255560:CDS | 40.0% | |
| AAGGATCTGGAGGAAGAAAA+TGG | + | chr2_2:49678418-49678437 | Msa0255560:CDS | 40.0% | |
| TTGACCCTGACATTCTACAT+AGG | + | chr2_2:49678554-49678573 | Msa0255560:CDS | 40.0% | |
| TGACCCTGACATTCTACATA+GGG | + | chr2_2:49678555-49678574 | Msa0255560:CDS | 40.0% | |
| AAGAGTTGGAAAGAGAGGAA+GGG | + | chr2_2:49678581-49678600 | Msa0255560:CDS | 40.0% | |
| ! | AAGAGGCTTTAGCTGAGATT+AGG | + | chr2_2:49678671-49678690 | Msa0255560:CDS | 40.0% |
| ATTTCCTTGAAACGGTTGGT+CGG | - | chr2_2:49678753-49678772 | None:intergenic | 40.0% | |
| TCGAATTTCCTTGAAACGGT+TGG | - | chr2_2:49678757-49678776 | None:intergenic | 40.0% | |
| CGTTTCAAGGAAATTCGACA+AGG | + | chr2_2:49678759-49678778 | Msa0255560:CDS | 40.0% | |
| GCAGTTCACAACAGAAAGAA+TGG | + | chr2_2:49678786-49678805 | Msa0255560:CDS | 40.0% | |
| TCACAACAGAAAGAATGGGA+AGG | + | chr2_2:49678791-49678810 | Msa0255560:CDS | 40.0% | |
| ! | GGCATTCTTGTTTCTCTTCT+TGG | - | chr2_2:49679091-49679110 | None:intergenic | 40.0% |
| ACACCAACTGTTGTCCACAA+AGG | + | chr2_2:49677269-49677288 | Msa0255560:CDS | 45.0% | |
| TAGCCTTTGTGGACAACAGT+TGG | - | chr2_2:49677275-49677294 | None:intergenic | 45.0% | |
| ! | ACGAGGAAACTCATCGACTA+TGG | - | chr2_2:49677375-49677394 | None:intergenic | 45.0% |
| TCGATGAGTTTCCTCGTCTT+GGG | + | chr2_2:49677378-49677397 | Msa0255560:CDS | 45.0% | |
| TGTTTGAAGGTTGCTGCTCT+TGG | + | chr2_2:49677563-49677582 | Msa0255560:CDS | 45.0% | |
| GTTTGAAGGTTGCTGCTCTT+GGG | + | chr2_2:49677564-49677583 | Msa0255560:CDS | 45.0% | |
| GGATGTGTACTGTGCTTAAG+AGG | + | chr2_2:49677588-49677607 | Msa0255560:CDS | 45.0% | |
| !! | TAAGAGGATTGGTCCGAGTT+TGG | + | chr2_2:49677604-49677623 | Msa0255560:CDS | 45.0% |
| ! | GAGTTTGGCGTATTTGGAAC+AGG | + | chr2_2:49677619-49677638 | Msa0255560:CDS | 45.0% |
| ! | TGGCGTATTTGGAACAGGTT+AGG | + | chr2_2:49677624-49677643 | Msa0255560:CDS | 45.0% |
| GATTTGTGGGTATCCGAATG+TGG | + | chr2_2:49677697-49677716 | Msa0255560:CDS | 45.0% | |
| TTTGTGGGTATCCGAATGTG+GGG | + | chr2_2:49677699-49677718 | Msa0255560:CDS | 45.0% | |
| AAGGAACTCTTCCCCACATT+CGG | - | chr2_2:49677713-49677732 | None:intergenic | 45.0% | |
| TACCACTAAGTCGCTGTTTG+TGG | + | chr2_2:49677781-49677800 | Msa0255560:CDS | 45.0% | |
| ACCACTAAGTCGCTGTTTGT+GGG | + | chr2_2:49677782-49677801 | Msa0255560:CDS | 45.0% | |
| ! | GATTTTGGATAGGCCGTTTG+AGG | + | chr2_2:49677853-49677872 | Msa0255560:CDS | 45.0% |
| TGGGTATACTATTGCTCAGC+AGG | + | chr2_2:49677964-49677983 | Msa0255560:CDS | 45.0% | |
| GTATACTATTGCTCAGCAGG+CGG | + | chr2_2:49677967-49677986 | Msa0255560:CDS | 45.0% | |
| TCCTCAGATAACCCATCCAA+CGG | - | chr2_2:49678067-49678086 | None:intergenic | 45.0% | |
| TTCTTCAGTCAACGCACTCA+TGG | - | chr2_2:49678182-49678201 | None:intergenic | 45.0% | |
| !! | ATGAGTGCGTTGACTGAAGA+AGG | + | chr2_2:49678181-49678200 | Msa0255560:CDS | 45.0% |
| ! | GACTGAAGAAGGTGTGATTG+CGG | + | chr2_2:49678192-49678211 | Msa0255560:CDS | 45.0% |
| TGAGAGATTGCTGAACCAGA+GGG | + | chr2_2:49678231-49678250 | Msa0255560:CDS | 45.0% | |
| ! | TTTAGCTTCCAAAACTGCCG+GGG | - | chr2_2:49678359-49678378 | None:intergenic | 45.0% |
| ! | CTTTAGCTTCCAAAACTGCC+GGG | - | chr2_2:49678360-49678379 | None:intergenic | 45.0% |
| ! | GCTTTAGCTTCCAAAACTGC+CGG | - | chr2_2:49678361-49678380 | None:intergenic | 45.0% |
| GATCTGGAGGAAGAAAATGG+AGG | + | chr2_2:49678421-49678440 | Msa0255560:CDS | 45.0% | |
| CCACCCTATGTAGAATGTCA+GGG | - | chr2_2:49678561-49678580 | None:intergenic | 45.0% | |
| TCCACCCTATGTAGAATGTC+AGG | - | chr2_2:49678562-49678581 | None:intergenic | 45.0% | |
| TCTACATAGGGTGGAAGAGT+TGG | + | chr2_2:49678567-49678586 | Msa0255560:CDS | 45.0% | |
| GAAGAGTTGGAAAGAGAGGA+AGG | + | chr2_2:49678580-49678599 | Msa0255560:CDS | 45.0% | |
| TGGAAAGAGAGGAAGGGTTA+AGG | + | chr2_2:49678587-49678606 | Msa0255560:CDS | 45.0% | |
| AGATGGAACCGAATTGACAC+CGG | + | chr2_2:49678642-49678661 | Msa0255560:CDS | 45.0% | |
| ! | TTGCTGTTCCGGTGTCAATT+CGG | - | chr2_2:49678653-49678672 | None:intergenic | 45.0% |
| ! | AGGCTTTAGCTGAGATTAGG+AGG | + | chr2_2:49678674-49678693 | Msa0255560:CDS | 45.0% |
| CAAGGAAATTCGACAAGGAC+AGG | + | chr2_2:49678764-49678783 | Msa0255560:CDS | 45.0% | |
| TCTTGGGCTTGATCCTTCTA+TGG | + | chr2_2:49678825-49678844 | Msa0255560:CDS | 45.0% | |
| AGCAGATCTGCATCTAGGAA+AGG | + | chr2_2:49678865-49678884 | Msa0255560:CDS | 45.0% | |
| GATCTGCATCTAGGAAAGGT+CGG | + | chr2_2:49678869-49678888 | Msa0255560:CDS | 45.0% | |
| ATCTAGGAAAGGTCGGAAGA+GGG | + | chr2_2:49678876-49678895 | Msa0255560:CDS | 45.0% | |
| TCACCAGAAGGAAGAAACGA+TGG | + | chr2_2:49678904-49678923 | Msa0255560:CDS | 45.0% | |
| CACCAGAAGGAAGAAACGAT+GGG | + | chr2_2:49678905-49678924 | Msa0255560:CDS | 45.0% | |
| ATCCCATCGTTTCTTCCTTC+TGG | - | chr2_2:49678910-49678929 | None:intergenic | 45.0% | |
| AGAAGGAAGAAACGATGGGA+TGG | + | chr2_2:49678909-49678928 | Msa0255560:CDS | 45.0% | |
| CAGGAACAACTTCATGTGGT+GGG | - | chr2_2:49679008-49679027 | None:intergenic | 45.0% | |
| TCTCCAGGAACAACTTCATG+TGG | - | chr2_2:49679012-49679031 | None:intergenic | 45.0% | |
| CATGAAGTTGTTCCTGGAGA+AGG | + | chr2_2:49679012-49679031 | Msa0255560:CDS | 45.0% | |
| TTGTTCCTGGAGAAGGTCTT+AGG | + | chr2_2:49679019-49679038 | Msa0255560:CDS | 45.0% | |
| TGTTCCTGGAGAAGGTCTTA+GGG | + | chr2_2:49679020-49679039 | Msa0255560:CDS | 45.0% | |
| AGAAACAAGAATGCCAAGCG+TGG | + | chr2_2:49679096-49679115 | Msa0255560:CDS | 45.0% | |
| !! | TATACTGGAAAGCGCTCCAA+CGG | + | chr2_2:49679162-49679181 | Msa0255560:CDS | 45.0% |
| ACACCAACTGTTGTCCACAA+AGG | + | chr2_2:49677269-49677288 | Msa0255560:CDS | 45.0% | |
| TAGCCTTTGTGGACAACAGT+TGG | - | chr2_2:49677275-49677294 | None:intergenic | 45.0% | |
| ! | ACGAGGAAACTCATCGACTA+TGG | - | chr2_2:49677375-49677394 | None:intergenic | 45.0% |
| TCGATGAGTTTCCTCGTCTT+GGG | + | chr2_2:49677378-49677397 | Msa0255560:CDS | 45.0% | |
| TGTTTGAAGGTTGCTGCTCT+TGG | + | chr2_2:49677563-49677582 | Msa0255560:CDS | 45.0% | |
| GTTTGAAGGTTGCTGCTCTT+GGG | + | chr2_2:49677564-49677583 | Msa0255560:CDS | 45.0% | |
| GGATGTGTACTGTGCTTAAG+AGG | + | chr2_2:49677588-49677607 | Msa0255560:CDS | 45.0% | |
| !! | TAAGAGGATTGGTCCGAGTT+TGG | + | chr2_2:49677604-49677623 | Msa0255560:CDS | 45.0% |
| ! | GAGTTTGGCGTATTTGGAAC+AGG | + | chr2_2:49677619-49677638 | Msa0255560:CDS | 45.0% |
| ! | TGGCGTATTTGGAACAGGTT+AGG | + | chr2_2:49677624-49677643 | Msa0255560:CDS | 45.0% |
| GATTTGTGGGTATCCGAATG+TGG | + | chr2_2:49677697-49677716 | Msa0255560:CDS | 45.0% | |
| TTTGTGGGTATCCGAATGTG+GGG | + | chr2_2:49677699-49677718 | Msa0255560:CDS | 45.0% | |
| AAGGAACTCTTCCCCACATT+CGG | - | chr2_2:49677713-49677732 | None:intergenic | 45.0% | |
| TACCACTAAGTCGCTGTTTG+TGG | + | chr2_2:49677781-49677800 | Msa0255560:CDS | 45.0% | |
| ACCACTAAGTCGCTGTTTGT+GGG | + | chr2_2:49677782-49677801 | Msa0255560:CDS | 45.0% | |
| ! | GATTTTGGATAGGCCGTTTG+AGG | + | chr2_2:49677853-49677872 | Msa0255560:CDS | 45.0% |
| TGGGTATACTATTGCTCAGC+AGG | + | chr2_2:49677964-49677983 | Msa0255560:CDS | 45.0% | |
| GTATACTATTGCTCAGCAGG+CGG | + | chr2_2:49677967-49677986 | Msa0255560:CDS | 45.0% | |
| TCCTCAGATAACCCATCCAA+CGG | - | chr2_2:49678067-49678086 | None:intergenic | 45.0% | |
| TTCTTCAGTCAACGCACTCA+TGG | - | chr2_2:49678182-49678201 | None:intergenic | 45.0% | |
| !! | ATGAGTGCGTTGACTGAAGA+AGG | + | chr2_2:49678181-49678200 | Msa0255560:CDS | 45.0% |
| ! | GACTGAAGAAGGTGTGATTG+CGG | + | chr2_2:49678192-49678211 | Msa0255560:CDS | 45.0% |
| TGAGAGATTGCTGAACCAGA+GGG | + | chr2_2:49678231-49678250 | Msa0255560:CDS | 45.0% | |
| ! | TTTAGCTTCCAAAACTGCCG+GGG | - | chr2_2:49678359-49678378 | None:intergenic | 45.0% |
| ! | CTTTAGCTTCCAAAACTGCC+GGG | - | chr2_2:49678360-49678379 | None:intergenic | 45.0% |
| ! | GCTTTAGCTTCCAAAACTGC+CGG | - | chr2_2:49678361-49678380 | None:intergenic | 45.0% |
| GATCTGGAGGAAGAAAATGG+AGG | + | chr2_2:49678421-49678440 | Msa0255560:CDS | 45.0% | |
| CCACCCTATGTAGAATGTCA+GGG | - | chr2_2:49678561-49678580 | None:intergenic | 45.0% | |
| TCCACCCTATGTAGAATGTC+AGG | - | chr2_2:49678562-49678581 | None:intergenic | 45.0% | |
| TCTACATAGGGTGGAAGAGT+TGG | + | chr2_2:49678567-49678586 | Msa0255560:CDS | 45.0% | |
| GAAGAGTTGGAAAGAGAGGA+AGG | + | chr2_2:49678580-49678599 | Msa0255560:CDS | 45.0% | |
| TGGAAAGAGAGGAAGGGTTA+AGG | + | chr2_2:49678587-49678606 | Msa0255560:CDS | 45.0% | |
| AGATGGAACCGAATTGACAC+CGG | + | chr2_2:49678642-49678661 | Msa0255560:CDS | 45.0% | |
| ! | TTGCTGTTCCGGTGTCAATT+CGG | - | chr2_2:49678653-49678672 | None:intergenic | 45.0% |
| ! | AGGCTTTAGCTGAGATTAGG+AGG | + | chr2_2:49678674-49678693 | Msa0255560:CDS | 45.0% |
| CAAGGAAATTCGACAAGGAC+AGG | + | chr2_2:49678764-49678783 | Msa0255560:CDS | 45.0% | |
| TCTTGGGCTTGATCCTTCTA+TGG | + | chr2_2:49678825-49678844 | Msa0255560:CDS | 45.0% | |
| AGCAGATCTGCATCTAGGAA+AGG | + | chr2_2:49678865-49678884 | Msa0255560:CDS | 45.0% | |
| GATCTGCATCTAGGAAAGGT+CGG | + | chr2_2:49678869-49678888 | Msa0255560:CDS | 45.0% | |
| ATCTAGGAAAGGTCGGAAGA+GGG | + | chr2_2:49678876-49678895 | Msa0255560:CDS | 45.0% | |
| TCACCAGAAGGAAGAAACGA+TGG | + | chr2_2:49678904-49678923 | Msa0255560:CDS | 45.0% | |
| CACCAGAAGGAAGAAACGAT+GGG | + | chr2_2:49678905-49678924 | Msa0255560:CDS | 45.0% | |
| ATCCCATCGTTTCTTCCTTC+TGG | - | chr2_2:49678910-49678929 | None:intergenic | 45.0% | |
| AGAAGGAAGAAACGATGGGA+TGG | + | chr2_2:49678909-49678928 | Msa0255560:CDS | 45.0% | |
| CAGGAACAACTTCATGTGGT+GGG | - | chr2_2:49679008-49679027 | None:intergenic | 45.0% | |
| TCTCCAGGAACAACTTCATG+TGG | - | chr2_2:49679012-49679031 | None:intergenic | 45.0% | |
| CATGAAGTTGTTCCTGGAGA+AGG | + | chr2_2:49679012-49679031 | Msa0255560:CDS | 45.0% | |
| TTGTTCCTGGAGAAGGTCTT+AGG | + | chr2_2:49679019-49679038 | Msa0255560:CDS | 45.0% | |
| TGTTCCTGGAGAAGGTCTTA+GGG | + | chr2_2:49679020-49679039 | Msa0255560:CDS | 45.0% | |
| AGAAACAAGAATGCCAAGCG+TGG | + | chr2_2:49679096-49679115 | Msa0255560:CDS | 45.0% | |
| !! | TATACTGGAAAGCGCTCCAA+CGG | + | chr2_2:49679162-49679181 | Msa0255560:CDS | 45.0% |
| GTCGATGAGTTTCCTCGTCT+TGG | + | chr2_2:49677377-49677396 | Msa0255560:CDS | 50.0% | |
| CGATGAGTTTCCTCGTCTTG+GGG | + | chr2_2:49677379-49677398 | Msa0255560:CDS | 50.0% | |
| TGGTCCGAGTTTGGCGTATT+TGG | + | chr2_2:49677613-49677632 | Msa0255560:CDS | 50.0% | |
| GGAACAGGTTAGGCAGCATA+TGG | + | chr2_2:49677634-49677653 | Msa0255560:CDS | 50.0% | |
| AGGTTAGGCAGCATATGGCT+AGG | + | chr2_2:49677639-49677658 | Msa0255560:CDS | 50.0% | |
| ACCCACAAACAGCGACTTAG+TGG | - | chr2_2:49677786-49677805 | None:intergenic | 50.0% | |
| GTCGCTGTTTGTGGGTCATA+CGG | + | chr2_2:49677790-49677809 | Msa0255560:CDS | 50.0% | |
| AACGGCCTATCCAAAATCCC+AGG | - | chr2_2:49677851-49677870 | None:intergenic | 50.0% | |
| TGGATAGGCCGTTTGAGGAT+CGG | + | chr2_2:49677858-49677877 | Msa0255560:CDS | 50.0% | |
| TGCTCTTGCGCATTTGAGAG+CGG | + | chr2_2:49677907-49677926 | Msa0255560:CDS | 50.0% | |
| !! | GTTGGATGGGTTATCTGAGG+AGG | + | chr2_2:49678066-49678085 | Msa0255560:CDS | 50.0% |
| TTCAATTGGTCATGGAGGCG+AGG | + | chr2_2:49678132-49678151 | Msa0255560:CDS | 50.0% | |
| TCAATTGGTCATGGAGGCGA+GGG | + | chr2_2:49678133-49678152 | Msa0255560:CDS | 50.0% | |
| CTGGTTCAGCAATCTCTCAC+AGG | - | chr2_2:49678230-49678249 | None:intergenic | 50.0% | |
| GTGAGAGATTGCTGAACCAG+AGG | + | chr2_2:49678230-49678249 | Msa0255560:CDS | 50.0% | |
| TCCTTCTGGTCACGTGGTTT+CGG | - | chr2_2:49678319-49678338 | None:intergenic | 50.0% | |
| TACACGGAGGTCTTTCCTTC+TGG | - | chr2_2:49678333-49678352 | None:intergenic | 50.0% | |
| AAAACTGCCGGGGGAATACA+CGG | - | chr2_2:49678349-49678368 | None:intergenic | 50.0% | |
| TTAGCTTCCAAAACTGCCGG+GGG | - | chr2_2:49678358-49678377 | None:intergenic | 50.0% | |
| ! | GAGGAAGAAAATGGAGGTGC+TGG | + | chr2_2:49678427-49678446 | Msa0255560:CDS | 50.0% |
| CCCTGACATTCTACATAGGG+TGG | + | chr2_2:49678558-49678577 | Msa0255560:CDS | 50.0% | |
| GGTGGAAGAGTTGGAAAGAG+AGG | + | chr2_2:49678576-49678595 | Msa0255560:CDS | 50.0% | |
| AAGAGAGGAAGGGTTAAGGC+AGG | + | chr2_2:49678591-49678610 | Msa0255560:CDS | 50.0% | |
| ATTGACACCGGAACAGCAAG+AGG | + | chr2_2:49678654-49678673 | Msa0255560:CDS | 50.0% | |
| !! | GCTAAAGCCTCTTGCTGTTC+CGG | - | chr2_2:49678664-49678683 | None:intergenic | 50.0% |
| TGCGTAGCAGATCTGCATCT+AGG | + | chr2_2:49678860-49678879 | Msa0255560:CDS | 50.0% | |
| CATCTAGGAAAGGTCGGAAG+AGG | + | chr2_2:49678875-49678894 | Msa0255560:CDS | 50.0% | |
| AAGAGGGAGAGATCACCAGA+AGG | + | chr2_2:49678892-49678911 | Msa0255560:CDS | 50.0% | |
| !! | CTGAGACGCTGTTTCTTGCT+AGG | - | chr2_2:49678952-49678971 | None:intergenic | 50.0% |
| GTAGATCACTGTCTCGTTCC+AGG | + | chr2_2:49678971-49678990 | Msa0255560:CDS | 50.0% | |
| ATCACTGTCTCGTTCCAGGT+CGG | + | chr2_2:49678975-49678994 | Msa0255560:CDS | 50.0% | |
| !! | AACAACTTCATGTGGTGGGC+GGG | - | chr2_2:49679004-49679023 | None:intergenic | 50.0% |
| ! | GAACAACTTCATGTGGTGGG+CGG | - | chr2_2:49679005-49679024 | None:intergenic | 50.0% |
| CCAGGAACAACTTCATGTGG+TGG | - | chr2_2:49679009-49679028 | None:intergenic | 50.0% | |
| CCACCACATGAAGTTGTTCC+TGG | + | chr2_2:49679006-49679025 | Msa0255560:CDS | 50.0% | |
| GAATCCCTAAGACCTTCTCC+AGG | - | chr2_2:49679027-49679046 | None:intergenic | 50.0% | |
| TCTATCAGCTTCTCCACGCT+TGG | - | chr2_2:49679112-49679131 | None:intergenic | 50.0% | |
| GTCGATGAGTTTCCTCGTCT+TGG | + | chr2_2:49677377-49677396 | Msa0255560:CDS | 50.0% | |
| CGATGAGTTTCCTCGTCTTG+GGG | + | chr2_2:49677379-49677398 | Msa0255560:CDS | 50.0% | |
| TGGTCCGAGTTTGGCGTATT+TGG | + | chr2_2:49677613-49677632 | Msa0255560:CDS | 50.0% | |
| GGAACAGGTTAGGCAGCATA+TGG | + | chr2_2:49677634-49677653 | Msa0255560:CDS | 50.0% | |
| AGGTTAGGCAGCATATGGCT+AGG | + | chr2_2:49677639-49677658 | Msa0255560:CDS | 50.0% | |
| ACCCACAAACAGCGACTTAG+TGG | - | chr2_2:49677786-49677805 | None:intergenic | 50.0% | |
| GTCGCTGTTTGTGGGTCATA+CGG | + | chr2_2:49677790-49677809 | Msa0255560:CDS | 50.0% | |
| AACGGCCTATCCAAAATCCC+AGG | - | chr2_2:49677851-49677870 | None:intergenic | 50.0% | |
| TGGATAGGCCGTTTGAGGAT+CGG | + | chr2_2:49677858-49677877 | Msa0255560:CDS | 50.0% | |
| TGCTCTTGCGCATTTGAGAG+CGG | + | chr2_2:49677907-49677926 | Msa0255560:CDS | 50.0% | |
| !! | GTTGGATGGGTTATCTGAGG+AGG | + | chr2_2:49678066-49678085 | Msa0255560:CDS | 50.0% |
| TTCAATTGGTCATGGAGGCG+AGG | + | chr2_2:49678132-49678151 | Msa0255560:CDS | 50.0% | |
| TCAATTGGTCATGGAGGCGA+GGG | + | chr2_2:49678133-49678152 | Msa0255560:CDS | 50.0% | |
| CTGGTTCAGCAATCTCTCAC+AGG | - | chr2_2:49678230-49678249 | None:intergenic | 50.0% | |
| GTGAGAGATTGCTGAACCAG+AGG | + | chr2_2:49678230-49678249 | Msa0255560:CDS | 50.0% | |
| TCCTTCTGGTCACGTGGTTT+CGG | - | chr2_2:49678319-49678338 | None:intergenic | 50.0% | |
| TACACGGAGGTCTTTCCTTC+TGG | - | chr2_2:49678333-49678352 | None:intergenic | 50.0% | |
| AAAACTGCCGGGGGAATACA+CGG | - | chr2_2:49678349-49678368 | None:intergenic | 50.0% | |
| TTAGCTTCCAAAACTGCCGG+GGG | - | chr2_2:49678358-49678377 | None:intergenic | 50.0% | |
| ! | GAGGAAGAAAATGGAGGTGC+TGG | + | chr2_2:49678427-49678446 | Msa0255560:CDS | 50.0% |
| CCCTGACATTCTACATAGGG+TGG | + | chr2_2:49678558-49678577 | Msa0255560:CDS | 50.0% | |
| GGTGGAAGAGTTGGAAAGAG+AGG | + | chr2_2:49678576-49678595 | Msa0255560:CDS | 50.0% | |
| AAGAGAGGAAGGGTTAAGGC+AGG | + | chr2_2:49678591-49678610 | Msa0255560:CDS | 50.0% | |
| ATTGACACCGGAACAGCAAG+AGG | + | chr2_2:49678654-49678673 | Msa0255560:CDS | 50.0% | |
| !! | GCTAAAGCCTCTTGCTGTTC+CGG | - | chr2_2:49678664-49678683 | None:intergenic | 50.0% |
| TGCGTAGCAGATCTGCATCT+AGG | + | chr2_2:49678860-49678879 | Msa0255560:CDS | 50.0% | |
| CATCTAGGAAAGGTCGGAAG+AGG | + | chr2_2:49678875-49678894 | Msa0255560:CDS | 50.0% | |
| AAGAGGGAGAGATCACCAGA+AGG | + | chr2_2:49678892-49678911 | Msa0255560:CDS | 50.0% | |
| !! | CTGAGACGCTGTTTCTTGCT+AGG | - | chr2_2:49678952-49678971 | None:intergenic | 50.0% |
| GTAGATCACTGTCTCGTTCC+AGG | + | chr2_2:49678971-49678990 | Msa0255560:CDS | 50.0% | |
| ATCACTGTCTCGTTCCAGGT+CGG | + | chr2_2:49678975-49678994 | Msa0255560:CDS | 50.0% | |
| !! | AACAACTTCATGTGGTGGGC+GGG | - | chr2_2:49679004-49679023 | None:intergenic | 50.0% |
| ! | GAACAACTTCATGTGGTGGG+CGG | - | chr2_2:49679005-49679024 | None:intergenic | 50.0% |
| CCAGGAACAACTTCATGTGG+TGG | - | chr2_2:49679009-49679028 | None:intergenic | 50.0% | |
| CCACCACATGAAGTTGTTCC+TGG | + | chr2_2:49679006-49679025 | Msa0255560:CDS | 50.0% | |
| GAATCCCTAAGACCTTCTCC+AGG | - | chr2_2:49679027-49679046 | None:intergenic | 50.0% | |
| TCTATCAGCTTCTCCACGCT+TGG | - | chr2_2:49679112-49679131 | None:intergenic | 50.0% | |
| GGATGAATGTCCCCAAGACG+AGG | - | chr2_2:49677392-49677411 | None:intergenic | 55.0% | |
| TGAAGGTTGCTGCTCTTGGG+AGG | + | chr2_2:49677567-49677586 | Msa0255560:CDS | 55.0% | |
| ! | CAAGACGGATTTGCAGCCGT+TGG | + | chr2_2:49678048-49678067 | Msa0255560:CDS | 55.0% |
| ACGGATTTGCAGCCGTTGGA+TGG | + | chr2_2:49678052-49678071 | Msa0255560:CDS | 55.0% | |
| CGGATTTGCAGCCGTTGGAT+GGG | + | chr2_2:49678053-49678072 | Msa0255560:CDS | 55.0% | |
| !! | GCCGTTGGATGGGTTATCTG+AGG | + | chr2_2:49678063-49678082 | Msa0255560:CDS | 55.0% |
| CAATTGGTCATGGAGGCGAG+GGG | + | chr2_2:49678134-49678153 | Msa0255560:CDS | 55.0% | |
| TCCGAAACCACGTGACCAGA+AGG | + | chr2_2:49678315-49678334 | Msa0255560:CDS | 55.0% | |
| GGTCTTTCCTTCTGGTCACG+TGG | - | chr2_2:49678325-49678344 | None:intergenic | 55.0% | |
| AAGACCTCCGTGTATTCCCC+CGG | + | chr2_2:49678339-49678358 | Msa0255560:CDS | 55.0% | |
| ! | GTGTATTCCCCCGGCAGTTT+TGG | + | chr2_2:49678348-49678367 | Msa0255560:CDS | 55.0% |
| AGCTAAGCAAGCAGCTGCTG+AGG | + | chr2_2:49678378-49678397 | Msa0255560:CDS | 55.0% | |
| AGAGCCGACCAACCGTTTCA+AGG | + | chr2_2:49678746-49678765 | Msa0255560:CDS | 55.0% | |
| GAAGGCAGCTGTCGTCTCTT+GGG | + | chr2_2:49678809-49678828 | Msa0255560:CDS | 55.0% | |
| GCTCCAACGGAAAGACAGAC+AGG | + | chr2_2:49679175-49679194 | Msa0255560:CDS | 55.0% | |
| GGATGAATGTCCCCAAGACG+AGG | - | chr2_2:49677392-49677411 | None:intergenic | 55.0% | |
| TGAAGGTTGCTGCTCTTGGG+AGG | + | chr2_2:49677567-49677586 | Msa0255560:CDS | 55.0% | |
| ! | CAAGACGGATTTGCAGCCGT+TGG | + | chr2_2:49678048-49678067 | Msa0255560:CDS | 55.0% |
| ACGGATTTGCAGCCGTTGGA+TGG | + | chr2_2:49678052-49678071 | Msa0255560:CDS | 55.0% | |
| CGGATTTGCAGCCGTTGGAT+GGG | + | chr2_2:49678053-49678072 | Msa0255560:CDS | 55.0% | |
| !! | GCCGTTGGATGGGTTATCTG+AGG | + | chr2_2:49678063-49678082 | Msa0255560:CDS | 55.0% |
| CAATTGGTCATGGAGGCGAG+GGG | + | chr2_2:49678134-49678153 | Msa0255560:CDS | 55.0% | |
| TCCGAAACCACGTGACCAGA+AGG | + | chr2_2:49678315-49678334 | Msa0255560:CDS | 55.0% | |
| GGTCTTTCCTTCTGGTCACG+TGG | - | chr2_2:49678325-49678344 | None:intergenic | 55.0% | |
| AAGACCTCCGTGTATTCCCC+CGG | + | chr2_2:49678339-49678358 | Msa0255560:CDS | 55.0% | |
| ! | GTGTATTCCCCCGGCAGTTT+TGG | + | chr2_2:49678348-49678367 | Msa0255560:CDS | 55.0% |
| AGCTAAGCAAGCAGCTGCTG+AGG | + | chr2_2:49678378-49678397 | Msa0255560:CDS | 55.0% | |
| AGAGCCGACCAACCGTTTCA+AGG | + | chr2_2:49678746-49678765 | Msa0255560:CDS | 55.0% | |
| GAAGGCAGCTGTCGTCTCTT+GGG | + | chr2_2:49678809-49678828 | Msa0255560:CDS | 55.0% | |
| GCTCCAACGGAAAGACAGAC+AGG | + | chr2_2:49679175-49679194 | Msa0255560:CDS | 55.0% | |
| GGAAGGGTTAAGGCAGGCAG+AGG | + | chr2_2:49678597-49678616 | Msa0255560:CDS | 60.0% | |
| GGAAGGCAGCTGTCGTCTCT+TGG | + | chr2_2:49678808-49678827 | Msa0255560:CDS | 60.0% | |
| GCGCCTGTCTGTCTTTCCGT+TGG | - | chr2_2:49679181-49679200 | None:intergenic | 60.0% | |
| GGAAGGGTTAAGGCAGGCAG+AGG | + | chr2_2:49678597-49678616 | Msa0255560:CDS | 60.0% | |
| GGAAGGCAGCTGTCGTCTCT+TGG | + | chr2_2:49678808-49678827 | Msa0255560:CDS | 60.0% | |
| GCGCCTGTCTGTCTTTCCGT+TGG | - | chr2_2:49679181-49679200 | None:intergenic | 60.0% | |
| ACTGCCGGGGGAATACACGG+AGG | - | chr2_2:49678346-49678365 | None:intergenic | 65.0% | |
| ACTGCCGGGGGAATACACGG+AGG | - | chr2_2:49678346-49678365 | None:intergenic | 65.0% | |
| ! | TGGTGGGCGGGAGACCGACC+TGG | - | chr2_2:49678992-49679011 | None:intergenic | 75.0% |
| ! | TGGTGGGCGGGAGACCGACC+TGG | - | chr2_2:49678992-49679011 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 49677182 | 49679203 | 49677182 | ID=Msa0255560;Name=Msa0255560 |
| chr2_2 | mRNA | 49677182 | 49679203 | 49677182 | ID=Msa0255560-mRNA-1;Parent=Msa0255560;Name=Msa0255560-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|-1|0|1|-1|1|1|0|673 |
| chr2_2 | exon | 49677182 | 49679203 | 49677182 | ID=Msa0255560-mRNA-1:exon:14940;Parent=Msa0255560-mRNA-1 |
| chr2_2 | CDS | 49677182 | 49679203 | 49677182 | ID=Msa0255560-mRNA-1:cds;Parent=Msa0255560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
