AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0435420

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0435420 MtrunA17_Chr3g0142381 99.816 543 1 0 1 543 1 543 0.0 1111
Msa0435420 MtrunA17_Chr3g0130621 31.214 346 206 10 69 405 26 348 8.49e-36 139
Msa0435420 MtrunA17_Chr3g0130621 29.739 306 187 7 30 329 94 377 2.25e-33 132
Msa0435420 MtrunA17_Chr3g0130621 28.313 332 198 11 47 365 58 362 6.20e-26 110
Msa0435420 MtrunA17_Chr8g0384631 27.941 272 174 4 43 314 37 286 8.59e-33 129
Msa0435420 MtrunA17_Chr8g0384631 28.618 304 182 10 86 379 26 304 1.46e-23 102
Msa0435420 MtrunA17_Chr8g0362061 26.343 391 226 13 40 399 269 628 1.75e-24 108
Msa0435420 MtrunA17_Chr8g0362061 27.179 195 126 5 220 404 276 464 5.44e-16 81.6
Msa0435420 MtrunA17_Chr4g0013271 26.854 391 237 15 39 406 49 413 5.61e-24 106
Msa0435420 MtrunA17_Chr4g0013271 28.409 264 156 8 58 310 173 414 5.62e-16 81.6
Msa0435420 MtrunA17_Chr1g0167471 26.873 387 231 14 39 399 257 617 1.80e-23 105
Msa0435420 MtrunA17_Chr1g0167471 25.633 316 181 13 118 405 282 571 1.77e-12 70.1
Msa0435420 MtrunA17_Chr7g0244411 26.649 379 225 14 39 392 247 597 3.02e-23 104
Msa0435420 MtrunA17_Chr7g0244411 26.692 266 159 11 47 299 361 603 1.02e-17 87.0
Msa0435420 MtrunA17_Chr7g0244411 27.083 192 124 5 220 401 255 440 2.70e-13 73.2
Msa0435420 MtrunA17_Chr1g0202151 26.579 380 231 13 43 399 266 620 5.31e-23 103
Msa0435420 MtrunA17_Chr1g0202151 25.000 192 128 5 220 401 270 455 8.87e-14 74.7
Msa0435420 MtrunA17_Chr1g0202151 27.572 243 131 9 20 244 405 620 2.75e-12 69.7
Msa0435420 MtrunA17_Chr3g0123301 29.779 272 158 8 56 310 132 387 5.85e-23 102
Msa0435420 MtrunA17_Chr3g0123301 27.742 310 182 12 114 405 150 435 3.06e-18 87.8
Msa0435420 MtrunA17_Chr3g0123301 25.000 240 153 8 52 277 306 532 2.38e-11 66.2
Msa0435420 MtrunA17_Chr3g0123301 22.034 295 177 6 47 296 189 475 8.37e-11 64.7
Msa0435420 MtrunA17_Chr3g0094741 26.649 379 225 14 47 399 310 661 1.22e-22 102
Msa0435420 MtrunA17_Chr3g0094741 25.521 192 127 4 220 401 310 495 2.26e-15 79.7
Msa0435420 MtrunA17_Chr6g0457381 30.952 252 145 9 39 289 134 357 3.68e-22 99.0
Msa0435420 MtrunA17_Chr6g0457381 26.727 333 217 10 82 405 8 322 7.36e-21 94.7
Msa0435420 MtrunA17_Chr6g0457381 26.829 369 224 13 58 401 38 385 5.22e-20 92.4
Msa0435420 MtrunA17_Chr6g0457381 27.869 305 175 11 20 311 55 327 8.26e-20 91.7
Msa0435420 MtrunA17_Chr6g0457381 27.758 281 182 7 130 405 4 268 4.67e-19 89.4
Msa0435420 MtrunA17_Chr6g0457381 32.143 196 117 7 57 244 196 383 1.07e-17 85.5
Msa0435420 MtrunA17_Chr5g0442001 26.302 384 223 15 45 399 298 650 4.85e-22 100
Msa0435420 MtrunA17_Chr5g0442001 27.027 259 155 6 41 283 397 637 5.21e-18 88.2
Msa0435420 MtrunA17_Chr5g0442001 27.083 192 124 4 220 401 300 485 9.97e-17 84.0
Msa0435420 MtrunA17_Chr6g0463421 25.459 381 236 13 42 399 262 617 7.41e-21 97.1
Msa0435420 MtrunA17_Chr6g0463421 28.646 192 121 5 220 401 267 452 9.64e-16 80.9
Msa0435420 MtrunA17_Chr7g0253611 27.719 285 153 9 47 309 177 430 8.80e-20 93.6
Msa0435420 MtrunA17_Chr7g0253611 24.107 336 183 9 75 401 151 423 3.16e-15 79.3
Msa0435420 MtrunA17_Chr3g0109811 23.016 378 242 12 45 399 293 644 8.63e-19 90.5
Msa0435420 MtrunA17_Chr3g0109811 30.126 239 138 8 198 424 279 500 7.46e-17 84.3
Msa0435420 MtrunA17_Chr5g0415871 26.257 358 214 13 65 399 53 383 9.48e-19 88.6
Msa0435420 MtrunA17_Chr5g0415871 27.138 269 161 9 78 332 15 262 7.00e-14 73.6
Msa0435420 MtrunA17_Chr7g0220131 25.854 410 227 17 43 407 42 419 2.28e-16 81.6
Msa0435420 MtrunA17_Chr7g0220131 23.836 365 217 15 80 405 24 366 3.54e-12 68.6
Msa0435420 MtrunA17_Chr3g0140201 29.339 242 134 9 61 275 102 333 1.56e-15 79.3
Msa0435420 MtrunA17_Chr7g0239601 25.434 173 114 2 105 277 32 189 5.91e-15 73.9
Msa0435420 MtrunA17_Chr7g0239601 28.495 186 119 6 224 402 32 210 1.30e-14 73.2
Msa0435420 MtrunA17_Chr7g0239601 30.939 181 107 4 65 244 44 207 2.68e-14 72.0
Msa0435420 MtrunA17_Chr2g0317861 27.152 302 182 9 20 310 182 456 4.41e-14 74.7
Msa0435420 MtrunA17_Chr3g0130871 24.925 333 208 12 95 403 15 329 2.88e-12 68.2
Msa0435420 MtrunA17_Chr3g0130871 27.165 254 137 9 47 275 74 304 7.28e-12 67.0
Msa0435420 MtrunA17_Chr5g0404371 25.962 312 138 10 61 284 121 427 4.93e-12 68.2
Msa0435420 MtrunA17_Chr3g0112381 35.922 103 62 2 45 145 27 127 1.34e-11 63.2
Msa0435420 MtrunA17_Chr7g0233601 27.715 267 162 8 57 315 151 394 2.71e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0435420 AT1G19880.1 68.727 550 149 8 1 543 5 538 0.0 746
Msa0435420 AT5G63860.1 31.322 348 208 10 67 405 24 349 4.08e-34 134
Msa0435420 AT5G63860.1 27.972 286 183 5 30 314 94 357 9.15e-31 125
Msa0435420 AT5G63860.1 26.923 182 121 5 231 405 17 193 1.91e-12 69.7
Msa0435420 AT5G16040.1 27.545 334 212 11 82 405 10 323 2.90e-25 108
Msa0435420 AT5G16040.1 29.719 249 148 9 39 287 135 356 4.68e-20 92.8
Msa0435420 AT5G16040.1 27.704 379 212 16 56 401 38 387 2.44e-19 90.9
Msa0435420 AT5G16040.1 27.437 277 161 9 46 311 81 328 3.49e-19 90.1
Msa0435420 AT3G23270.2 27.273 374 221 13 43 392 242 588 1.61e-23 105
Msa0435420 AT3G23270.1 27.273 374 221 13 43 392 238 584 1.85e-23 105
Msa0435420 AT3G02510.1 25.581 387 254 11 82 457 10 373 4.48e-23 102
Msa0435420 AT3G02510.1 28.623 276 157 9 47 311 82 328 2.95e-20 93.6
Msa0435420 AT3G02510.1 28.042 378 210 16 57 401 39 387 1.28e-18 88.6
Msa0435420 AT5G11580.1 25.745 369 205 9 56 399 14 338 5.73e-23 103
Msa0435420 AT4G14368.4 26.738 374 223 14 43 392 257 603 5.74e-23 103
Msa0435420 AT4G14368.4 27.907 215 114 7 47 244 420 610 1.79e-12 70.9
Msa0435420 AT4G14368.3 26.738 374 223 14 43 392 250 596 6.14e-23 103
Msa0435420 AT4G14368.3 27.907 215 114 7 47 244 413 603 1.83e-12 70.9
Msa0435420 AT4G14368.2 26.738 374 223 14 43 392 255 601 7.09e-23 103
Msa0435420 AT4G14368.2 27.907 215 114 7 47 244 418 608 2.00e-12 70.9
Msa0435420 AT3G47660.3 26.902 368 228 12 47 399 287 628 1.01e-22 103
Msa0435420 AT3G47660.3 28.272 191 121 4 220 400 287 471 6.32e-15 78.6
Msa0435420 AT3G47660.5 26.902 368 228 12 47 399 287 628 1.01e-22 103
Msa0435420 AT3G47660.5 28.272 191 121 4 220 400 287 471 6.32e-15 78.6
Msa0435420 AT3G47660.1 26.902 368 228 12 47 399 290 631 1.12e-22 103
Msa0435420 AT3G47660.1 28.272 191 121 4 220 400 290 474 5.95e-15 78.6
Msa0435420 AT3G47660.2 26.902 368 228 12 47 399 290 631 1.17e-22 103
Msa0435420 AT3G47660.2 28.272 191 121 4 220 400 290 474 6.33e-15 78.6
Msa0435420 AT3G47660.7 26.902 368 228 12 47 399 145 486 1.60e-22 102
Msa0435420 AT3G47660.7 28.272 191 121 4 220 400 145 329 8.81e-15 78.2
Msa0435420 AT4G14368.1 26.738 374 223 14 43 392 257 603 1.88e-22 102
Msa0435420 AT4G14368.1 27.907 215 114 7 47 244 420 610 4.12e-12 69.7
Msa0435420 AT5G12350.1 25.469 373 235 11 47 399 299 648 2.66e-22 102
Msa0435420 AT5G12350.1 28.421 190 122 5 220 401 299 482 1.36e-16 84.0
Msa0435420 AT5G12350.1 28.372 215 115 6 58 256 465 656 1.05e-13 74.7
Msa0435420 AT3G47660.6 26.902 368 228 12 47 399 212 553 3.49e-22 101
Msa0435420 AT3G47660.6 28.272 191 121 4 220 400 212 396 1.25e-14 77.8
Msa0435420 AT3G47660.4 26.902 368 228 12 47 399 326 667 6.21e-22 100
Msa0435420 AT3G47660.4 28.272 191 121 4 220 400 326 510 1.72e-14 77.4
Msa0435420 AT5G16040.2 27.500 320 198 12 82 389 10 307 8.21e-22 97.4
Msa0435420 AT5G16040.2 28.400 250 143 8 46 284 81 305 8.19e-18 85.5
Msa0435420 AT5G60870.1 28.866 291 173 8 34 314 129 395 1.61e-21 97.8
Msa0435420 AT5G60870.1 25.862 348 183 11 75 405 46 335 5.25e-17 84.0
Msa0435420 AT5G60870.1 25.604 207 135 5 42 244 249 440 5.14e-12 68.6
Msa0435420 AT3G03790.1 27.056 377 204 13 47 399 174 503 2.41e-21 99.0
Msa0435420 AT3G03790.1 29.293 198 121 6 216 399 170 362 1.04e-13 74.7
Msa0435420 AT3G03790.1 26.971 241 147 7 79 310 152 372 2.11e-11 67.4
Msa0435420 AT3G03790.2 27.056 377 204 13 47 399 177 506 2.63e-21 99.0
Msa0435420 AT3G03790.2 29.293 198 121 6 216 399 173 365 9.91e-14 74.7
Msa0435420 AT3G03790.2 26.939 245 150 7 75 310 151 375 1.53e-11 67.8
Msa0435420 AT5G19420.1 25.201 373 236 11 47 399 303 652 2.68e-21 99.0
Msa0435420 AT5G19420.1 28.421 190 122 5 220 401 303 486 1.56e-16 84.0
Msa0435420 AT3G02510.3 31.660 259 143 12 31 287 72 298 2.87e-21 95.5
Msa0435420 AT3G02510.3 28.623 276 157 9 47 311 24 270 1.10e-20 94.0
Msa0435420 AT3G02510.3 27.606 355 197 15 80 401 2 329 5.38e-17 82.8
Msa0435420 AT3G02510.3 26.113 337 215 12 132 457 2 315 1.52e-14 75.5
Msa0435420 AT3G02510.3 29.592 196 123 6 57 244 139 327 3.10e-14 74.7
Msa0435420 AT5G19420.2 25.201 373 236 11 47 399 337 686 3.71e-21 98.6
Msa0435420 AT5G19420.2 28.421 190 122 5 220 401 337 520 1.86e-16 83.6
Msa0435420 AT3G03790.3 27.056 377 204 13 47 399 177 506 4.13e-21 98.2
Msa0435420 AT3G03790.3 29.293 198 121 6 216 399 173 365 1.47e-13 74.3
Msa0435420 AT3G03790.3 26.939 245 150 7 75 310 151 375 1.90e-11 67.4
Msa0435420 AT3G26100.5 30.182 275 153 10 56 310 129 384 8.31e-21 96.3
Msa0435420 AT3G26100.5 24.737 380 198 12 50 380 189 529 7.88e-15 77.8
Msa0435420 AT3G26100.6 30.182 275 153 10 56 310 129 384 8.31e-21 96.3
Msa0435420 AT3G26100.6 24.737 380 198 12 50 380 189 529 7.88e-15 77.8
Msa0435420 AT3G26100.2 30.182 275 153 10 56 310 129 384 8.31e-21 96.3
Msa0435420 AT3G26100.2 24.737 380 198 12 50 380 189 529 7.88e-15 77.8
Msa0435420 AT3G26100.3 30.182 275 153 10 56 310 29 284 8.36e-21 95.5
Msa0435420 AT3G26100.3 24.737 380 198 12 50 380 89 429 6.20e-15 77.4
Msa0435420 AT3G26100.4 30.182 275 153 10 56 310 29 284 8.36e-21 95.5
Msa0435420 AT3G26100.4 24.737 380 198 12 50 380 89 429 6.20e-15 77.4
Msa0435420 AT3G26100.1 30.182 275 153 10 56 310 29 284 8.36e-21 95.5
Msa0435420 AT3G26100.1 24.737 380 198 12 50 380 89 429 6.20e-15 77.4
Msa0435420 AT5G19420.3 25.410 366 230 11 47 392 303 645 1.54e-20 96.3
Msa0435420 AT5G19420.3 28.421 190 122 5 220 401 303 486 4.13e-16 82.4
Msa0435420 AT5G19420.3 30.814 172 96 4 77 244 500 652 3.49e-13 73.2
Msa0435420 AT5G42140.2 25.401 374 229 14 43 392 264 611 4.33e-20 95.1
Msa0435420 AT5G42140.2 25.000 192 128 5 220 401 268 453 1.55e-13 74.3
Msa0435420 AT5G42140.2 27.273 242 133 8 20 244 403 618 6.18e-12 68.9
Msa0435420 AT5G42140.1 25.401 374 229 14 43 392 264 611 4.33e-20 95.1
Msa0435420 AT5G42140.1 25.000 192 128 5 220 401 268 453 1.55e-13 74.3
Msa0435420 AT5G42140.1 27.273 242 133 8 20 244 403 618 6.18e-12 68.9
Msa0435420 AT5G60870.2 28.956 297 172 9 34 314 129 402 4.59e-20 93.6
Msa0435420 AT5G60870.2 25.862 348 183 11 75 405 46 335 8.76e-17 83.6
Msa0435420 AT3G02510.2 26.498 317 205 9 82 389 10 307 4.70e-20 91.7
Msa0435420 AT3G02510.2 29.719 249 139 8 47 284 82 305 2.45e-19 89.4
Msa0435420 AT1G76950.1 26.053 380 235 11 43 399 268 624 1.43e-19 93.6
Msa0435420 AT1G76950.1 26.562 192 126 5 220 401 272 458 3.27e-15 79.7
Msa0435420 AT1G69710.2 26.615 387 216 15 47 399 278 630 1.05e-18 90.5
Msa0435420 AT1G69710.2 27.848 237 147 6 198 424 263 485 5.55e-11 65.9
Msa0435420 AT1G69710.1 26.615 387 216 15 47 399 291 643 1.26e-18 90.5
Msa0435420 AT1G69710.1 27.848 237 147 6 198 424 276 498 6.02e-11 65.9
Msa0435420 AT3G55580.1 27.626 257 146 6 48 277 222 465 2.38e-17 85.5
Msa0435420 AT3G55580.1 28.452 239 121 7 101 310 225 442 2.45e-12 69.7
Msa0435420 AT1G65920.2 23.969 388 246 10 41 406 231 591 2.61e-17 86.3
Msa0435420 AT1G27060.1 30.392 204 125 5 57 259 49 236 3.38e-17 84.0
Msa0435420 AT1G27060.1 26.100 341 209 10 78 405 16 326 1.09e-13 73.6
Msa0435420 AT1G65920.1 23.969 388 246 10 41 406 277 637 3.45e-17 85.9
Msa0435420 AT3G15430.6 27.007 274 171 7 44 310 204 455 3.78e-17 84.7
Msa0435420 AT3G15430.6 26.284 331 181 8 77 405 182 451 3.17e-15 79.0
Msa0435420 AT3G15430.4 27.007 274 171 7 44 310 204 455 3.78e-17 84.7
Msa0435420 AT3G15430.4 26.284 331 181 8 77 405 182 451 3.17e-15 79.0
Msa0435420 AT3G15430.2 27.007 274 171 7 44 310 204 455 3.78e-17 84.7
Msa0435420 AT3G15430.2 26.284 331 181 8 77 405 182 451 3.17e-15 79.0
Msa0435420 AT3G15430.3 27.007 274 171 7 44 310 204 455 3.78e-17 84.7
Msa0435420 AT3G15430.3 26.284 331 181 8 77 405 182 451 3.17e-15 79.0
Msa0435420 AT3G15430.5 27.007 274 171 7 44 310 204 455 3.78e-17 84.7
Msa0435420 AT3G15430.5 26.284 331 181 8 77 405 182 451 3.17e-15 79.0
Msa0435420 AT3G15430.1 27.007 274 171 7 44 310 204 455 3.78e-17 84.7
Msa0435420 AT3G15430.1 26.284 331 181 8 77 405 182 451 3.17e-15 79.0
Msa0435420 AT5G60870.4 25.862 348 183 11 75 405 46 335 5.74e-17 83.6
Msa0435420 AT5G60870.4 28.070 285 172 8 34 308 129 390 9.81e-17 82.8
Msa0435420 AT3G02300.2 24.528 371 225 13 71 405 25 376 1.13e-16 83.2
Msa0435420 AT3G02300.2 26.303 403 238 16 41 407 50 429 1.82e-15 79.3
Msa0435420 AT3G02300.1 24.528 371 225 13 71 405 14 365 1.18e-16 83.2
Msa0435420 AT3G02300.1 26.303 403 238 16 41 407 39 418 1.73e-15 79.3
Msa0435420 AT5G08710.1 26.154 390 238 14 42 402 65 433 8.51e-16 80.1
Msa0435420 AT5G60870.3 26.695 236 142 6 88 314 13 226 2.41e-15 77.0
Msa0435420 AT5G60870.3 25.604 207 135 5 42 244 80 271 1.68e-12 68.6
Msa0435420 AT3G53830.3 33.158 190 106 5 59 244 295 467 4.19e-15 78.2
Msa0435420 AT3G53830.3 25.070 359 175 13 45 401 203 469 4.23e-15 78.2
Msa0435420 AT3G53830.4 32.632 190 107 4 59 244 323 495 5.79e-15 78.2
Msa0435420 AT3G53830.4 25.140 358 174 13 46 401 232 497 8.04e-15 77.4
Msa0435420 AT5G48330.2 24.324 370 232 13 69 400 93 452 3.28e-12 69.3
Msa0435420 AT5G08710.2 33.051 236 138 7 82 311 54 275 8.09e-12 67.0
Msa0435420 AT3G53830.1 26.724 232 128 7 46 276 204 394 9.53e-12 67.4
Msa0435420 AT5G48330.1 23.989 371 233 13 69 400 93 453 9.57e-12 67.8
Msa0435420 AT3G53830.2 26.724 232 128 7 46 276 232 422 1.28e-11 67.4

Find 194 sgRNAs with CRISPR-Local

Find 507 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAACTAAGTCATGACTTTC+TGG 0.129930 3_2:-88573878 None:intergenic
CTAAGCCTCTAATGGATTTA+AGG 0.137896 3_2:+88570669 Msa0435420:CDS
AACAGTGTTGCTTGTGGTTT+GGG 0.263671 3_2:+88571769 Msa0435420:intron
TAATTTCACAGAACTGTCTT+TGG 0.265905 3_2:-88569388 None:intergenic
AATATACGATGCATGGATTC+AGG 0.280176 3_2:+88570823 Msa0435420:CDS
CTCAAGTATATCCACCTTCT+TGG 0.292087 3_2:-88571027 None:intergenic
CATAACCTTAAATCCATTAG+AGG 0.299264 3_2:-88570674 None:intergenic
CGAGCAATAGCTTCCCTTGC+TGG 0.299714 3_2:+88569435 Msa0435420:CDS
AAACAAGAGTTCACCTCCTT+TGG 0.302920 3_2:-88567273 None:intergenic
CCGACACAAGACAGCGAATA+GGG 0.309068 3_2:-88568352 None:intergenic
CTTAAATCCATTAGAGGCTT+AGG 0.314409 3_2:-88570668 None:intergenic
TTAGAACTGCTGTTATTTGC+AGG 0.316206 3_2:-88573817 None:intergenic
AGGTCACCAGCCGCTGATTA+AGG 0.316326 3_2:-88574076 None:intergenic
TAAAACTCAAGTGCCTAAAA+AGG 0.316886 3_2:+88573543 Msa0435420:CDS
ACTGCTGGGCTTCCACAGTA+TGG 0.317692 3_2:+88568572 Msa0435420:CDS
TTCCACAGTATGGGCAGCTT+GGG 0.334508 3_2:+88568582 Msa0435420:CDS
AAACAGTGTTGCTTGTGGTT+TGG 0.350838 3_2:+88571768 Msa0435420:intron
CTTCCACAGTATGGGCAGCT+TGG 0.357567 3_2:+88568581 Msa0435420:CDS
CCGCTGATTAAGGTTCTATT+AGG 0.370665 3_2:-88574066 None:intergenic
AGGTCCTGCCGAGGGTAATT+TGG 0.372205 3_2:+88567334 Msa0435420:CDS
TGATTCCTCGTGCATAAGTT+GGG 0.374540 3_2:+88570870 Msa0435420:CDS
TGTTGTGCAGAAAGGGCAAC+TGG 0.376822 3_2:+88567697 Msa0435420:intron
ATGAGGGGAGAGAAGGAGAT+TGG 0.377516 3_2:-88567059 None:intergenic
GATGGAAATTCCCTAGCATT+TGG 0.384805 3_2:+88568012 Msa0435420:CDS
AGGAATCAGCCCCAACAAAA+TGG 0.390112 3_2:-88570855 None:intergenic
AGGTGGGGTTATGGTGGTTA+TGG 0.398844 3_2:+88569692 Msa0435420:intron
ATTATGATTGCTAGGACTGC+TGG 0.399237 3_2:+88568557 Msa0435420:intron
GTGAATTCTGCTTGTACTGC+AGG 0.412241 3_2:+88569954 Msa0435420:CDS
GAGATACCATTCAGCGTGAT+AGG 0.414029 3_2:+88567726 Msa0435420:CDS
AATAGCGAGGATGAAGTTAA+TGG 0.414274 3_2:+88573679 Msa0435420:CDS
CATGTGTACAGGTGGGGTTA+TGG 0.421071 3_2:+88569683 Msa0435420:intron
GATGTACCCTAAGCCTCTAA+TGG 0.423368 3_2:+88570661 Msa0435420:CDS
CTGATTCCTCGTGCATAAGT+TGG 0.424200 3_2:+88570869 Msa0435420:CDS
AACAAGAGTTCACCTCCTTT+GGG 0.425944 3_2:-88567272 None:intergenic
AATTCTGTAGGCTAGGACAT+CGG 0.429206 3_2:+88569841 Msa0435420:intron
ATTCTGTAGGCTAGGACATC+GGG 0.434303 3_2:+88569842 Msa0435420:intron
CCTCTGTAACAACTACAGTA+TGG 0.436175 3_2:-88567990 None:intergenic
TACACATACTTCTGTCCATT+AGG 0.440187 3_2:-88570925 None:intergenic
AAAATTGTTCAAGCTGGAGC+TGG 0.440882 3_2:+88567961 Msa0435420:CDS
TAAAGAACACCGGTGATGAC+TGG 0.444787 3_2:+88570639 Msa0435420:CDS
TTCTGGCAAGGGCCGGGGTA+AGG 0.449517 3_2:+88573738 Msa0435420:CDS
TATTGCTGATAGACTTGATC+AGG 0.451116 3_2:+88571822 Msa0435420:CDS
CTCTTACCAGTTGACTTCAC+TGG 0.451296 3_2:-88573847 None:intergenic
CCTGATGCAATTATTTCAGC+AGG 0.451970 3_2:+88569927 Msa0435420:CDS
ATGAAGTGAAGAAGGTGTTA+AGG 0.454376 3_2:-88567096 None:intergenic
GGGAAAGATGAGGGGAGAGA+AGG 0.458617 3_2:-88567066 None:intergenic
AATTGCAATTAATAGTTAGC+TGG 0.460870 3_2:-88573936 None:intergenic
TTGAAGGGCGTTGCTATACA+TGG 0.462322 3_2:+88567587 Msa0435420:CDS
AAACTAAGTCATGACTTTCT+GGG 0.463390 3_2:-88573877 None:intergenic
TCTTCTCCAGTGAAGTCAAC+TGG 0.463789 3_2:+88573841 Msa0435420:CDS
GGGGTTATGGTGGTTATGGA+AGG 0.464165 3_2:+88569696 Msa0435420:CDS
TCAAGTATATCCACCTTCTT+GGG 0.467755 3_2:-88571026 None:intergenic
TGAAGAAGGTGTTAAGGAAA+TGG 0.468015 3_2:-88567090 None:intergenic
GATGAGAAATGAAGTGAAGA+AGG 0.469708 3_2:-88567104 None:intergenic
GAGCTGGGATACGGACCTAA+TGG 0.470385 3_2:+88570910 Msa0435420:CDS
GCCGACGAGAGGACGGAGGC+GGG 0.472359 3_2:-88567366 None:intergenic
GAGTCTGAGGGTAAAGGCTC+TGG 0.474002 3_2:+88573775 Msa0435420:CDS
TTAAATCCATTAGAGGCTTA+GGG 0.474350 3_2:-88570667 None:intergenic
AAAGGCTCTGGCCGAGGACG+TGG 0.475426 3_2:+88573787 Msa0435420:CDS
TGCCGACGAGAGGACGGAGG+CGG 0.476627 3_2:-88567367 None:intergenic
GGAAATGGCGGGAAAGATGA+GGG 0.476646 3_2:-88567075 None:intergenic
CTGGAGGGCAGCTGTATATG+TGG 0.476947 3_2:+88570609 Msa0435420:CDS
TTGTGGTTTGGGTCATTCCA+TGG 0.477559 3_2:+88571780 Msa0435420:CDS
ACCCTCAGACTCCGACACTT+TGG 0.484222 3_2:-88573764 None:intergenic
TGCGTGGCATTGGACGTTGA+AGG 0.485102 3_2:+88567571 Msa0435420:CDS
TTTGGGTCATTCCATGGTTG+TGG 0.487755 3_2:+88571786 Msa0435420:CDS
GTCTTCAGCTGTTCCCAAGA+AGG 0.489874 3_2:+88571013 Msa0435420:CDS
TCCGACACAAGACAGCGAAT+AGG 0.491538 3_2:-88568353 None:intergenic
AGATACAAAATTGTTCAAGC+TGG 0.495929 3_2:+88567955 Msa0435420:intron
TTCGTGTCATTGCGTGGCAT+TGG 0.496071 3_2:+88567561 Msa0435420:CDS
TCATGCTCAGAATGGAGAGC+TGG 0.497285 3_2:+88570894 Msa0435420:CDS
CCTGCTGAAATAATTGCATC+AGG 0.498802 3_2:-88569927 None:intergenic
GTTTGTTCCATCCAAATGCT+AGG 0.499233 3_2:-88568023 None:intergenic
ACTGTAGTTGTTACAGAGGA+TGG 0.504285 3_2:+88567994 Msa0435420:CDS
AAAAGTTCTGGCAAGGGCCG+GGG 0.506111 3_2:+88573733 Msa0435420:CDS
ACGGATCTAACGGCTAGTAT+TGG 0.506979 3_2:-88567130 None:intergenic
ATATACGATGCATGGATTCA+GGG 0.509327 3_2:+88570824 Msa0435420:CDS
CAGTATGGGCAGCTTGGGCA+TGG 0.510523 3_2:+88568587 Msa0435420:CDS
GCGTGGCATTGGACGTTGAA+GGG 0.510601 3_2:+88567572 Msa0435420:CDS
CGATACGTTGCATCGGGCTG+CGG 0.513309 3_2:+88567398 Msa0435420:CDS
TTAATCAGCGGCTGGTGACC+TGG 0.514638 3_2:+88574078 Msa0435420:three_prime_UTR
TTCTCAAACAGTGTTGCTTG+TGG 0.516140 3_2:+88571763 Msa0435420:intron
TTAAGGTTCTATTAGGCTGA+TGG 0.516173 3_2:-88574059 None:intergenic
TTATGATTGCTAGGACTGCT+GGG 0.519649 3_2:+88568558 Msa0435420:intron
CAGAATGGAGAGCTGGGATA+CGG 0.520391 3_2:+88570901 Msa0435420:CDS
CTGCAGCTTGATACACATGA+TGG 0.522680 3_2:+88573069 Msa0435420:intron
GAGCAATAGCTTCCCTTGCT+GGG 0.523599 3_2:+88569436 Msa0435420:CDS
AGCATTCGATACGTTGCATC+GGG 0.523617 3_2:+88567392 Msa0435420:CDS
ACGAGAGGACGGAGGCGGGA+AGG 0.524041 3_2:-88567362 None:intergenic
AGTTGGCCTATCACGCTGAA+TGG 0.524912 3_2:-88567732 None:intergenic
GAAGCTATTGCTCGAGGACG+TGG 0.526893 3_2:-88569426 None:intergenic
GAAATTCCCTAGCATTTGGA+TGG 0.527337 3_2:+88568016 Msa0435420:CDS
TGAAGTTAATGGTGAGGCTG+AGG 0.529067 3_2:+88573690 Msa0435420:CDS
CCCTATTCGCTGTCTTGTGT+CGG 0.529834 3_2:+88568352 Msa0435420:CDS
GACAATGGTTTCCCCAGCAA+GGG 0.529979 3_2:-88569448 None:intergenic
CAGAAAGGGCAACTGGGTCA+TGG 0.531028 3_2:+88567704 Msa0435420:intron
TGCTGATGCCGACGAGAGGA+CGG 0.531162 3_2:-88567373 None:intergenic
AGGAAATGGCGGGAAAGATG+AGG 0.531363 3_2:-88567076 None:intergenic
GAGGGTAAAGGCTCTGGCCG+AGG 0.531410 3_2:+88573781 Msa0435420:CDS
GTGTCGGAGTCTGAGGGTAA+AGG 0.532240 3_2:+88573769 Msa0435420:CDS
TACATCAGAAGTTGAGAAGA+AGG 0.535425 3_2:+88567229 Msa0435420:CDS
GGCTGATGGAAAACTGAAGA+AGG 0.537426 3_2:-88574045 None:intergenic
AAGAAGGTGGATATACTTGA+GGG 0.539093 3_2:+88571029 Msa0435420:CDS
CAGGAGCGCGACCACGTCCT+CGG 0.540964 3_2:-88573798 None:intergenic
CTGCTGGGCTTCCACAGTAT+GGG 0.542164 3_2:+88568573 Msa0435420:CDS
ATCCAAAGTGTCGGAGTCTG+AGG 0.546995 3_2:+88573762 Msa0435420:CDS
GAGACCAAATTACCCTCGGC+AGG 0.551043 3_2:-88567338 None:intergenic
GCTAGGACATCGGGAGCAGA+AGG 0.552867 3_2:+88569851 Msa0435420:CDS
TTTGTTCCATCCAAATGCTA+GGG 0.553881 3_2:-88568022 None:intergenic
AGTTGGGGTCATGCTCAGAA+TGG 0.554049 3_2:+88570886 Msa0435420:CDS
GAAGGTGTTAAGGAAATGGC+GGG 0.554499 3_2:-88567086 None:intergenic
CAAGAAGGTGGATATACTTG+AGG 0.555096 3_2:+88571028 Msa0435420:CDS
ATAGAACCTTAATCAGCGGC+TGG 0.555756 3_2:+88574070 Msa0435420:three_prime_UTR
CGGTTGGAATATACGATGCA+TGG 0.556512 3_2:+88570816 Msa0435420:CDS
TGACAATGGTTTCCCCAGCA+AGG 0.558824 3_2:-88569449 None:intergenic
GCATGTGGAACAAATCATAC+AGG 0.562044 3_2:+88569477 Msa0435420:CDS
GTGTACAGGTGGGGTTATGG+TGG 0.562157 3_2:+88569686 Msa0435420:intron
CTCAGAAGAAGAGCAAGAAG+AGG 0.566436 3_2:+88573642 Msa0435420:CDS
TGGAACAAACATGGACAGCT+AGG 0.566459 3_2:+88568036 Msa0435420:CDS
GAAAGTTCAGAAACCACAGT+TGG 0.572182 3_2:-88567749 None:intergenic
TGGAGGGCAGCTGTATATGT+GGG 0.572789 3_2:+88570610 Msa0435420:CDS
GTGAAGTCAACTGGTAAGAG+AGG 0.577873 3_2:+88573850 Msa0435420:CDS
AAATTGTTCAAGCTGGAGCT+GGG 0.578150 3_2:+88567962 Msa0435420:CDS
ACACTTTGGATGCCTTACCC+CGG 0.579617 3_2:-88573750 None:intergenic
GATATCGTTGGTCGTCGCAA+AGG 0.579977 3_2:+88567314 Msa0435420:CDS
CATGCTCAGAATGGAGAGCT+GGG 0.581451 3_2:+88570895 Msa0435420:CDS
ACCATTGTCAAGGTGGCATG+TGG 0.582156 3_2:+88569462 Msa0435420:CDS
AAACATGGACAGCTAGGTTC+CGG 0.582193 3_2:+88568042 Msa0435420:CDS
TGTGAAAATGACGGATCTAA+CGG 0.582429 3_2:-88567140 None:intergenic
TCCCGCCTCCGTCCTCTCGT+CGG 0.582568 3_2:+88567365 Msa0435420:CDS
TGAAGGGCGTTGCTATACAT+GGG 0.582917 3_2:+88567588 Msa0435420:CDS
AAGCTGACAGCTCAAAGAAG+AGG 0.584051 3_2:+88573596 Msa0435420:CDS
TCCACATGCCACCTTGACAA+TGG 0.585101 3_2:-88569463 None:intergenic
TGCTGGGGAAACCATTGTCA+AGG 0.586213 3_2:+88569452 Msa0435420:CDS
TCGTCGCAAAGGTCCTGCCG+AGG 0.586450 3_2:+88567325 Msa0435420:CDS
CGAATGCTGATGCCGACGAG+AGG 0.587089 3_2:-88567377 None:intergenic
AGAAGTTGAGAAGAAGGTCG+AGG 0.591344 3_2:+88567235 Msa0435420:CDS
AGGGTACATCCAGTCATCAC+CGG 0.591794 3_2:-88570648 None:intergenic
CAGCATTCGATACGTTGCAT+CGG 0.592841 3_2:+88567391 Msa0435420:CDS
GAAGGGCGTTGCTATACATG+GGG 0.593326 3_2:+88567589 Msa0435420:CDS
AGAAGGTGTTAAGGAAATGG+CGG 0.593751 3_2:-88567087 None:intergenic
TATACGATGCATGGATTCAG+GGG 0.595200 3_2:+88570825 Msa0435420:CDS
AGACATTTCACCGTTCACTC+CGG 0.598445 3_2:-88567207 None:intergenic
GTGTGGCTATCTTCAGTCGA+AGG 0.600472 3_2:+88568410 Msa0435420:CDS
GAGAATCAAGCTCCCAAAGG+AGG 0.604298 3_2:+88567260 Msa0435420:CDS
GAAATGGCGGGAAAGATGAG+GGG 0.608158 3_2:-88567074 None:intergenic
TTTCGTTGCAACTCAAAATG+CGG 0.610173 3_2:+88573912 Msa0435420:three_prime_UTR
CGTCGCAAAGGTCCTGCCGA+GGG 0.610410 3_2:+88567326 Msa0435420:CDS
TTCATCAATAACATCTCACC+AGG 0.612461 3_2:-88574096 None:intergenic
TTCAGCTGTTCCCAAGAAGG+TGG 0.612636 3_2:+88571016 Msa0435420:CDS
GTTACTCTCGCCGGAGTGAA+CGG 0.612669 3_2:+88567197 Msa0435420:five_prime_UTR
GCCACGTGCTGGGATATCGT+TGG 0.616073 3_2:+88567302 Msa0435420:CDS
CGACACAAGACAGCGAATAG+GGG 0.616819 3_2:-88568351 None:intergenic
GTTCACTCCGGCGAGAGTAA+CGG 0.618782 3_2:-88567195 None:intergenic
GATTCCTCGTGCATAAGTTG+GGG 0.619534 3_2:+88570871 Msa0435420:CDS
TTGAGGGTATGCATGTAATG+AGG 0.620851 3_2:+88571045 Msa0435420:CDS
TGCTCTGTCAACCACAACCA+TGG 0.623155 3_2:-88571797 None:intergenic
CGAGGATGAAGTTAATGGTG+AGG 0.626334 3_2:+88573684 Msa0435420:CDS
AGGAGAGACCAAATTACCCT+CGG 0.628341 3_2:-88567342 None:intergenic
GCAAGGGAAGCTATTGCTCG+AGG 0.628727 3_2:-88569432 None:intergenic
GGGTAAGGCATCCAAAGTGT+CGG 0.631380 3_2:+88573753 Msa0435420:CDS
GCAGTGGCGGTGGATAAGAA+TGG 0.633901 3_2:+88569572 Msa0435420:intron
TGCCCAAGCTGCCCATACTG+TGG 0.634362 3_2:-88568584 None:intergenic
TGCAGCTTCGTGTCATTGCG+TGG 0.634876 3_2:+88567555 Msa0435420:intron
GTTGTGCAGAAAGGGCAACT+GGG 0.636990 3_2:+88567698 Msa0435420:intron
ACACATGATGGCAAAGCTGT+TGG 0.637999 3_2:+88573081 Msa0435420:CDS
TCCAAAGTGTCGGAGTCTGA+GGG 0.639192 3_2:+88573763 Msa0435420:CDS
GCATTTGGATGGAACAAACA+TGG 0.639496 3_2:+88568027 Msa0435420:CDS
AGCAATAGCTTCCCTTGCTG+GGG 0.642390 3_2:+88569437 Msa0435420:CDS
GATGGCAAAGCTGTTGGTGA+AGG 0.646025 3_2:+88573087 Msa0435420:CDS
GAAGAGAATCAAGCTCCCAA+AGG 0.653323 3_2:+88567257 Msa0435420:CDS
CCATACTGTAGTTGTTACAG+AGG 0.653376 3_2:+88567990 Msa0435420:CDS
CCTAATAGAACCTTAATCAG+CGG 0.662077 3_2:+88574066 Msa0435420:three_prime_UTR
GAAGTTACATATGCTACATG+TGG 0.662656 3_2:+88568374 Msa0435420:CDS
GTTACATATGCTACATGTGG+TGG 0.668990 3_2:+88568377 Msa0435420:CDS
TGGGGAAACCATTGTCAAGG+TGG 0.671803 3_2:+88569455 Msa0435420:CDS
TCAGCGTGATAGGCCAACTG+TGG 0.672141 3_2:+88567736 Msa0435420:CDS
GCTGAAATAATTGCATCAGG+AGG 0.676604 3_2:-88569924 None:intergenic
GGAGGGCAGCTGTATATGTG+GGG 0.682771 3_2:+88570611 Msa0435420:CDS
TGGGGCAAAATAAAGAACAC+CGG 0.685495 3_2:+88570629 Msa0435420:CDS
TGAAGAAAGTGACAATAGCG+AGG 0.689085 3_2:+88573666 Msa0435420:CDS
TGATGCCGACGAGAGGACGG+AGG 0.696844 3_2:-88567370 None:intergenic
GAGGTTAAAACATCACGTGG+TGG 0.705714 3_2:+88573709 Msa0435420:CDS
TATTCGTGAAAATATCAACA+CGG 0.705910 3_2:-88569890 None:intergenic
GTGAAAATATCAACACGGCG+TGG 0.706015 3_2:-88569885 None:intergenic
ATACGATGCATGGATTCAGG+GGG 0.708960 3_2:+88570826 Msa0435420:CDS
GCTGAGGTTAAAACATCACG+TGG 0.716701 3_2:+88573706 Msa0435420:CDS
GATGTTATTGATGAAACTTG+AGG 0.723067 3_2:+88574104 Msa0435420:three_prime_UTR
ACCAACGATATCCCAGCACG+TGG 0.723780 3_2:-88567303 None:intergenic
ATGACCCCAACTTATGCACG+AGG 0.724767 3_2:-88570875 None:intergenic
GATACTACTACAGTGAGGTG+CGG 0.727168 3_2:-88567027 None:intergenic
AAGGGCGTTGCTATACATGG+GGG 0.736643 3_2:+88567590 Msa0435420:CDS
TGGGCATGGAACAGATAACG+AGG 0.759223 3_2:+88568601 Msa0435420:CDS
GCGCAGATACTACTACAGTG+AGG 0.793093 3_2:-88567032 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTATAAAAAAAAA+AGG - chr3_2:88569823-88569842 None:intergenic 0.0%
!!! TAGTTTTAGATATATATTAT+TGG + chr3_2:88568924-88568943 Msa0435420:intron 10.0%
!! TATAGAAAACAAAAATAATA+AGG - chr3_2:88569551-88569570 None:intergenic 10.0%
!! TTTATAAAAAAAAATTCTGT+AGG + chr3_2:88569829-88569848 Msa0435420:intron 10.0%
!!! TCTTTTTAAAAAGAAAAATT+GGG + chr3_2:88570267-88570286 Msa0435420:intron 10.0%
!!! GAAATTTTTATTAATTTAAG+TGG + chr3_2:88570296-88570315 Msa0435420:intron 10.0%
!! AAATATATAATACTTTAATC+AGG - chr3_2:88570782-88570801 None:intergenic 10.0%
!! TTATATACACTTTATAAAAT+TGG - chr3_2:88571392-88571411 None:intergenic 10.0%
!! TTAGAAAGAAAAATTGAATT+AGG + chr3_2:88566989-88567008 Msa0435420:five_prime_UTR 15.0%
!! TAGAAAGAAAAATTGAATTA+GGG + chr3_2:88566990-88567009 Msa0435420:five_prime_UTR 15.0%
!! AAAAAAATATGTGAAAATGA+CGG - chr3_2:88567152-88567171 None:intergenic 15.0%
!! AGAAACAATAACAATATATA+TGG - chr3_2:88568256-88568275 None:intergenic 15.0%
!!! TTTTTTAAATTATGATTGCT+AGG + chr3_2:88568549-88568568 Msa0435420:intron 15.0%
!! AAATTACAAAACAATCAATT+AGG + chr3_2:88568979-88568998 Msa0435420:intron 15.0%
!! GATAATATGCTTAAATATAA+AGG + chr3_2:88569185-88569204 Msa0435420:intron 15.0%
!! TTATAAAAAAAAAAGGTAGT+TGG - chr3_2:88569816-88569835 None:intergenic 15.0%
!!! CTCTTTTTAAAAAGAAAAAT+TGG + chr3_2:88570266-88570285 Msa0435420:intron 15.0%
!! GGTAAAAATTTATATGTAAA+AGG - chr3_2:88570495-88570514 None:intergenic 15.0%
!! TAATAATGAAAAGTTATTAG+TGG + chr3_2:88572829-88572848 Msa0435420:intron 15.0%
!! AATAATGAAAAGTTATTAGT+GGG + chr3_2:88572830-88572849 Msa0435420:intron 15.0%
!!! TATTTTTCTTTTACAAGTTA+AGG + chr3_2:88573293-88573312 Msa0435420:intron 15.0%
!! AAAAATTAAAACAACAGAAT+GGG - chr3_2:88574130-88574149 None:intergenic 15.0%
!! AAAAAATTAAAACAACAGAA+TGG - chr3_2:88574131-88574150 None:intergenic 15.0%
!!! TGTTTGTGTTTTCAATTTTA+TGG + chr3_2:88567862-88567881 Msa0435420:intron 20.0%
!! TGACAAGAAATAATAACAAA+AGG - chr3_2:88567906-88567925 None:intergenic 20.0%
!! ACAGATTATTCTGTAAAATT+AGG + chr3_2:88568088-88568107 Msa0435420:intron 20.0%
!! CATTATTCAAATTCAAACAT+GGG - chr3_2:88568785-88568804 None:intergenic 20.0%
!! ACATTATTCAAATTCAAACA+TGG - chr3_2:88568786-88568805 None:intergenic 20.0%
!! TAGATATATATTATTGGACA+AGG + chr3_2:88568930-88568949 Msa0435420:intron 20.0%
!!! GCATGAACATATATTTTTTA+TGG - chr3_2:88569086-88569105 None:intergenic 20.0%
!! ATACAAACATGTATTATCAT+GGG - chr3_2:88569312-88569331 None:intergenic 20.0%
!! ATAAGGAATAGTAATATACA+AGG - chr3_2:88569534-88569553 None:intergenic 20.0%
!! TTTAAAAAGAAAAATTGGGA+AGG + chr3_2:88570271-88570290 Msa0435420:intron 20.0%
!! TTAAAAAGAAAAATTGGGAA+GGG + chr3_2:88570272-88570291 Msa0435420:intron 20.0%
!! ATGAATTATTATTCAAACCA+TGG - chr3_2:88570707-88570726 None:intergenic 20.0%
!!! ATATTTATTTTGGTAAACAG+CGG + chr3_2:88570796-88570815 Msa0435420:intron 20.0%
!! AATGTAGAAATTGAATCTAT+TGG + chr3_2:88571199-88571218 Msa0435420:intron 20.0%
!! ATGTAGAAATTGAATCTATT+GGG + chr3_2:88571200-88571219 Msa0435420:intron 20.0%
!!! TTTTTTATATAACAATGGAC+TGG + chr3_2:88571415-88571434 Msa0435420:intron 20.0%
!!! CATGATTTTGAAAATTTAGT+GGG + chr3_2:88571438-88571457 Msa0435420:intron 20.0%
!!! ATGATTTTGAAAATTTAGTG+GGG + chr3_2:88571439-88571458 Msa0435420:intron 20.0%
!!! GATAAGTAGTTGTTTATTTT+TGG - chr3_2:88571644-88571663 None:intergenic 20.0%
!!! ATTGTCTGATATTATGTTTT+AGG + chr3_2:88571921-88571940 Msa0435420:intron 20.0%
!! CTATTGGATAAGAAATAATA+GGG + chr3_2:88572680-88572699 Msa0435420:intron 20.0%
!! TCTATCTCTTGAATAAATTT+GGG + chr3_2:88572738-88572757 Msa0435420:intron 20.0%
!!! TTTTTAAGAGTATGTTTCAA+TGG + chr3_2:88573249-88573268 Msa0435420:intron 20.0%
!!! TGTTAATTTGTGTTTTTTGA+GGG - chr3_2:88573457-88573476 None:intergenic 20.0%
!!! TTTAAATTGTAACCCTTTTT+TGG + chr3_2:88573978-88573997 Msa0435420:three_prime_UTR 20.0%
!! TAACGGTCAAAAAGTTATTT+TGG - chr3_2:88567181-88567200 None:intergenic 25.0%
!! TAGGCTATGTTTCATTTTAA+TGG + chr3_2:88568107-88568126 Msa0435420:intron 25.0%
!! GGTTTCTGAAAATTGTATTA+AGG + chr3_2:88568449-88568468 Msa0435420:intron 25.0%
! AATAATGTTATCCATTGTTG+AGG + chr3_2:88568798-88568817 Msa0435420:intron 25.0%
! ATATATATTATTGGACAAGG+AGG + chr3_2:88568933-88568952 Msa0435420:intron 25.0%
! TGAAATAAACTCATTCTACA+AGG - chr3_2:88569161-88569180 None:intergenic 25.0%
! AAAGAAAAAATAAAATGCCC+AGG - chr3_2:88569230-88569249 None:intergenic 25.0%
! CATACAAACATGTATTATCA+TGG - chr3_2:88569313-88569332 None:intergenic 25.0%
! ATAATACATGTTTGTATGTG+TGG + chr3_2:88569315-88569334 Msa0435420:intron 25.0%
!!! TTTTTGTTTTCTATATGCAG+TGG + chr3_2:88569556-88569575 Msa0435420:intron 25.0%
! AATTTGAGAATCCAAATTTG+AGG - chr3_2:88569764-88569783 None:intergenic 25.0%
! CAAATTTGGATTCTCAAATT+CGG + chr3_2:88569764-88569783 Msa0435420:intron 25.0%
! AAAAAAAAATTCTGTAGGCT+AGG + chr3_2:88569834-88569853 Msa0435420:intron 25.0%
! TATTCGTGAAAATATCAACA+CGG - chr3_2:88569893-88569912 None:intergenic 25.0%
!!! GTGAACATTTTTTGAAAAGT+AGG - chr3_2:88570016-88570035 None:intergenic 25.0%
! AAATGATACTGATATCATGA+GGG + chr3_2:88570200-88570219 Msa0435420:intron 25.0%
! CATAATTCCTCAATAGTTAT+GGG - chr3_2:88570246-88570265 None:intergenic 25.0%
! GAAGGATATAAAAAAATGGT+CGG - chr3_2:88570516-88570535 None:intergenic 25.0%
! GCTTGAAGGATATAAAAAAA+TGG - chr3_2:88570520-88570539 None:intergenic 25.0%
!!! GGTTTATTTTTCATTTTAGC+TGG + chr3_2:88570590-88570609 Msa0435420:intron 25.0%
!!! TTATTTTTCATTTTAGCTGG+AGG + chr3_2:88570593-88570612 Msa0435420:intron 25.0%
!!! TATTTTTCATTTTAGCTGGA+GGG + chr3_2:88570594-88570613 Msa0435420:intron 25.0%
! TGCTATATATAAAATACGTC+AGG + chr3_2:88570726-88570745 Msa0435420:intron 25.0%
!! AATCATAGTGTTGCTAAAAA+GGG - chr3_2:88570956-88570975 None:intergenic 25.0%
!! AAATCATAGTGTTGCTAAAA+AGG - chr3_2:88570957-88570976 None:intergenic 25.0%
! TTTCTACATTTGATAAGTTG+AGG - chr3_2:88571189-88571208 None:intergenic 25.0%
! ATTCAGTAGTTGAATTGTAA+TGG - chr3_2:88571241-88571260 None:intergenic 25.0%
!! TTTTTCTATCAAGTGATTGA+GGG - chr3_2:88571320-88571339 None:intergenic 25.0%
!! ATTTTTCTATCAAGTGATTG+AGG - chr3_2:88571321-88571340 None:intergenic 25.0%
!!! GCATGATTTTGAAAATTTAG+TGG + chr3_2:88571437-88571456 Msa0435420:intron 25.0%
! TATAAACTGAAGATACTAAG+TGG - chr3_2:88571538-88571557 None:intergenic 25.0%
! TAGTATCTTCAGTTTATAAC+TGG + chr3_2:88571540-88571559 Msa0435420:intron 25.0%
!!! TAAGATTCTTTTTCAACAAG+AGG - chr3_2:88571698-88571717 None:intergenic 25.0%
! AGATCAATTCTCATTTATGT+CGG - chr3_2:88571730-88571749 None:intergenic 25.0%
!! CATCTGATTTAGTATGTTTT+AGG + chr3_2:88571957-88571976 Msa0435420:intron 25.0%
!!! TGAATCTTTTTTCACAATGA+TGG + chr3_2:88572001-88572020 Msa0435420:intron 25.0%
! ATTGATTAAAGTAAGTGTAG+CGG + chr3_2:88572188-88572207 Msa0435420:intron 25.0%
!! TTCTACAACTTTTCTACTAT+AGG - chr3_2:88572300-88572319 None:intergenic 25.0%
! GTAGAAAAGTTGTAGAAAAT+AGG + chr3_2:88572303-88572322 Msa0435420:intron 25.0%
! GTTCTATCAAAAACCATATT+TGG - chr3_2:88572485-88572504 None:intergenic 25.0%
!! CCTATTATTTCTTATCCAAT+AGG - chr3_2:88572682-88572701 None:intergenic 25.0%
! CCTATTGGATAAGAAATAAT+AGG + chr3_2:88572679-88572698 Msa0435420:intron 25.0%
!! AAATAATAGGGATTGCTATT+GGG + chr3_2:88572692-88572711 Msa0435420:intron 25.0%
! GTCTATCTCTTGAATAAATT+TGG + chr3_2:88572737-88572756 Msa0435420:intron 25.0%
!!! TAATAATTTTCTAGAGTGAC+TGG + chr3_2:88572860-88572879 Msa0435420:intron 25.0%
!!! AATAATTTTCTAGAGTGACT+GGG + chr3_2:88572861-88572880 Msa0435420:intron 25.0%
! TTGAGACAACTATTATTAAC+TGG - chr3_2:88573162-88573181 None:intergenic 25.0%
!! AATTTTTCCGATCTTTTTGT+TGG + chr3_2:88573214-88573233 Msa0435420:intron 25.0%
!!! CTCCTGATTTTTTAAAATCT+CGG + chr3_2:88573382-88573401 Msa0435420:intron 25.0%
!!! ATCCGAGATTTTAAAAAATC+AGG - chr3_2:88573387-88573406 None:intergenic 25.0%
!!! CTGTTAATTTGTGTTTTTTG+AGG - chr3_2:88573458-88573477 None:intergenic 25.0%
! AAAAACACAAATTAACAGTC+TGG + chr3_2:88573460-88573479 Msa0435420:intron 25.0%
! AATTGCAATTAATAGTTAGC+TGG - chr3_2:88573939-88573958 None:intergenic 25.0%
!!! TGTTGTGTTGATTTTTTTCG+TGG + chr3_2:88567522-88567541 Msa0435420:intron 30.0%
ATGAAATTGTTGTGCAGAAA+GGG + chr3_2:88567690-88567709 Msa0435420:intron 30.0%
CAAACATAAACATGTATGCA+AGG - chr3_2:88567848-88567867 None:intergenic 30.0%
AGATACAAAATTGTTCAAGC+TGG + chr3_2:88567955-88567974 Msa0435420:intron 30.0%
TTAATGTTCAAAGTTGACCT+GGG + chr3_2:88569210-88569229 Msa0435420:intron 30.0%
TAATTTCACAGAACTGTCTT+TGG - chr3_2:88569391-88569410 None:intergenic 30.0%
ATATTGAGCTAAGACACTAA+AGG - chr3_2:88569619-88569638 None:intergenic 30.0%
! AATTTGAGGTTCACAAAACA+TGG - chr3_2:88569750-88569769 None:intergenic 30.0%
! TGTTTTGTGAACCTCAAATT+TGG + chr3_2:88569750-88569769 Msa0435420:intron 30.0%
AGTTACACTCAAAAGGAATA+GGG - chr3_2:88569791-88569810 None:intergenic 30.0%
AAGTTACACTCAAAAGGAAT+AGG - chr3_2:88569792-88569811 None:intergenic 30.0%
TAACAGATGCATTATCAGAA+AGG - chr3_2:88570092-88570111 None:intergenic 30.0%
GATATCATGATCCTATTTCA+TGG + chr3_2:88570127-88570146 Msa0435420:intron 30.0%
ATAGAATACAGCCATGAAAT+AGG - chr3_2:88570141-88570160 None:intergenic 30.0%
TAACAGATGCATTATCAGAA+AGG - chr3_2:88570092-88570111 None:intergenic 30.0%
CAAATGATACTGATATCATG+AGG + chr3_2:88570199-88570218 Msa0435420:intron 30.0%
GCATAATTCCTCAATAGTTA+TGG - chr3_2:88570247-88570266 None:intergenic 30.0%
CAAATTATATCGTAGCTTGA+AGG - chr3_2:88570534-88570553 None:intergenic 30.0%
AAATTATAGCGTGCTGAATA+GGG - chr3_2:88570570-88570589 None:intergenic 30.0%
TTAAATCCATTAGAGGCTTA+GGG - chr3_2:88570670-88570689 None:intergenic 30.0%
CATAACCTTAAATCCATTAG+AGG - chr3_2:88570677-88570696 None:intergenic 30.0%
! TAAGGTTATGCTTTATTCCA+TGG + chr3_2:88570687-88570706 Msa0435420:intron 30.0%
AGGATGAAGAAGTAAATGAA+GGG - chr3_2:88570762-88570781 None:intergenic 30.0%
ATTCAGAAATTGCTTAGTAG+TGG + chr3_2:88571078-88571097 Msa0435420:intron 30.0%
! GTTTTCTTCTGTTGAACTTT+TGG - chr3_2:88571134-88571153 None:intergenic 30.0%
TCAACAGAAGAAAACTTTGA+AGG + chr3_2:88571139-88571158 Msa0435420:intron 30.0%
AGAATGTGAACATTCAAAAG+TGG - chr3_2:88571510-88571529 None:intergenic 30.0%
TTGTAGAAAATAGGCTTAGA+TGG + chr3_2:88572312-88572331 Msa0435420:intron 30.0%
TTGATCTACTCTTCTAACAA+AGG - chr3_2:88572369-88572388 None:intergenic 30.0%
TGTTAGAAGAGTAGATCAAA+TGG + chr3_2:88572370-88572389 Msa0435420:intron 30.0%
! GTTTCTCTAATGGTTTTCTT+AGG - chr3_2:88572428-88572447 None:intergenic 30.0%
CTTTCTAATGGTTTCTCTAA+TGG - chr3_2:88572438-88572457 None:intergenic 30.0%
CATTAGAGAAACCATTAGAA+AGG + chr3_2:88572436-88572455 Msa0435420:intron 30.0%
AACCATTAGAAAGGATTTAG+AGG + chr3_2:88572445-88572464 Msa0435420:intron 30.0%
! TGGTTTTTGATAGAACACTA+TGG + chr3_2:88572489-88572508 Msa0435420:intron 30.0%
GAAATAATAGGGATTGCTAT+TGG + chr3_2:88572691-88572710 Msa0435420:intron 30.0%
TTACTAAGAGATAGCTTAAC+TGG - chr3_2:88572956-88572975 None:intergenic 30.0%
! TACATTTAGAACTTCTCCAA+TGG - chr3_2:88572984-88573003 None:intergenic 30.0%
CGGAAAAATTCATCTACAAT+TGG - chr3_2:88573204-88573223 None:intergenic 30.0%
TGAACATCCAACAAAAAGAT+CGG - chr3_2:88573224-88573243 None:intergenic 30.0%
! TTAAGAGTATGTTTCAATGG+AGG + chr3_2:88573252-88573271 Msa0435420:intron 30.0%
!! TTTCAATGGAGGTTTTTAGA+GGG + chr3_2:88573263-88573282 Msa0435420:intron 30.0%
!!! GTTTTTTGAGGGTTTTGAAA+GGG - chr3_2:88573446-88573465 None:intergenic 30.0%
!!! TGTTTTTTGAGGGTTTTGAA+AGG - chr3_2:88573447-88573466 None:intergenic 30.0%
TAAAACTCAAGTGCCTAAAA+AGG + chr3_2:88573543-88573562 Msa0435420:CDS 30.0%
AAACTAAGTCATGACTTTCT+GGG - chr3_2:88573880-88573899 None:intergenic 30.0%
AAAACTAAGTCATGACTTTC+TGG - chr3_2:88573881-88573900 None:intergenic 30.0%
!!! GTCATGACTTAGTTTTTAGT+TGG + chr3_2:88573885-88573904 Msa0435420:exon 30.0%
!!! AGGCTTAAGTTTTTTGTGAA+GGG + chr3_2:88574008-88574027 Msa0435420:three_prime_UTR 30.0%
GATGTTATTGATGAAACTTG+AGG + chr3_2:88574104-88574123 Msa0435420:three_prime_UTR 30.0%
!! TGAAGAAGGTGTTAAGGAAA+TGG - chr3_2:88567093-88567112 None:intergenic 35.0%
!! ATGAAGTGAAGAAGGTGTTA+AGG - chr3_2:88567099-88567118 None:intergenic 35.0%
GATGAGAAATGAAGTGAAGA+AGG - chr3_2:88567107-88567126 None:intergenic 35.0%
!! TGTGAAAATGACGGATCTAA+CGG - chr3_2:88567143-88567162 None:intergenic 35.0%
TACATCAGAAGTTGAGAAGA+AGG + chr3_2:88567229-88567248 Msa0435420:CDS 35.0%
TAATGAGGTATATGACTGTG+AGG + chr3_2:88567615-88567634 Msa0435420:intron 35.0%
CATGAAATTGTTGTGCAGAA+AGG + chr3_2:88567689-88567708 Msa0435420:intron 35.0%
CTGAACTTTCAAAGTGAGTT+TGG + chr3_2:88567762-88567781 Msa0435420:intron 35.0%
TTTGTTCCATCCAAATGCTA+GGG - chr3_2:88568025-88568044 None:intergenic 35.0%
! TATCTTAGGCTTGGTTTAGA+TGG + chr3_2:88568165-88568184 Msa0435420:intron 35.0%
TTAGATGGTTACATGGTTGA+TGG + chr3_2:88568180-88568199 Msa0435420:intron 35.0%
TGGTAAATAGTGCAATGCAA+TGG + chr3_2:88568212-88568231 Msa0435420:intron 35.0%
GAAGTTACATATGCTACATG+TGG + chr3_2:88568374-88568393 Msa0435420:CDS 35.0%
GAAGGATCTTCTATACTGTA+TGG + chr3_2:88568428-88568447 Msa0435420:intron 35.0%
AGAACAGATATCCATGATCA+CGG - chr3_2:88568491-88568510 None:intergenic 35.0%
!! TGATAGTATTTGTTGTCCCA+AGG + chr3_2:88568649-88568668 Msa0435420:intron 35.0%
CCAATTAGCATCTGATCAAT+CGG - chr3_2:88568693-88568712 None:intergenic 35.0%
CGATTGATCAGATGCTAATT+GGG + chr3_2:88568691-88568710 Msa0435420:intron 35.0%
GATTGATCAGATGCTAATTG+GGG + chr3_2:88568692-88568711 Msa0435420:intron 35.0%
TGAGCTCAATGGTAATTCAA+TGG - chr3_2:88568724-88568743 None:intergenic 35.0%
! AACTGATGCATTGACAACAA+CGG - chr3_2:88568873-88568892 None:intergenic 35.0%
AAAAACGCAAGAGAAAAGGA+TGG - chr3_2:88569038-88569057 None:intergenic 35.0%
! ATCCTTTTCTCTTGCGTTTT+TGG + chr3_2:88569037-88569056 Msa0435420:intron 35.0%
ATCCAAAAACGCAAGAGAAA+AGG - chr3_2:88569042-88569061 None:intergenic 35.0%
TCTGATGCTCATATTTCATG+AGG - chr3_2:88569108-88569127 None:intergenic 35.0%
GTTAATGTTCAAAGTTGACC+TGG + chr3_2:88569209-88569228 Msa0435420:intron 35.0%
! TTGTTTTCTATATGCAGTGG+CGG + chr3_2:88569559-88569578 Msa0435420:intron 35.0%
! CTTGTGTTATTCATGTGTAC+AGG + chr3_2:88569672-88569691 Msa0435420:intron 35.0%
TGTTATTCATGTGTACAGGT+GGG + chr3_2:88569676-88569695 Msa0435420:intron 35.0%
!!! TTGGTTGGTAGTTTTCAGAT+TGG + chr3_2:88569719-88569738 Msa0435420:intron 35.0%
!!! TGGTTGGTAGTTTTCAGATT+GGG + chr3_2:88569720-88569739 Msa0435420:intron 35.0%
GTTGGAAAGTTACACTCAAA+AGG - chr3_2:88569798-88569817 None:intergenic 35.0%
TAGTTATGGGCTTGAAACAT+TGG - chr3_2:88570233-88570252 None:intergenic 35.0%
TTTCAAGCCCATAACTATTG+AGG + chr3_2:88570236-88570255 Msa0435420:intron 35.0%
GCATCAAATTCCTACACTTA+AGG - chr3_2:88570411-88570430 None:intergenic 35.0%
CAAATTATAGCGTGCTGAAT+AGG - chr3_2:88570571-88570590 None:intergenic 35.0%
CTATTCAGCACGCTATAATT+TGG + chr3_2:88570569-88570588 Msa0435420:intron 35.0%
CTTAAATCCATTAGAGGCTT+AGG - chr3_2:88570671-88570690 None:intergenic 35.0%
!! CTAAGCCTCTAATGGATTTA+AGG + chr3_2:88570669-88570688 Msa0435420:CDS 35.0%
GGATGAAGAAGTAAATGAAG+GGG - chr3_2:88570761-88570780 None:intergenic 35.0%
CAGGATGAAGAAGTAAATGA+AGG - chr3_2:88570763-88570782 None:intergenic 35.0%
!!! TTATTTTGGTAAACAGCGGT+TGG + chr3_2:88570800-88570819 Msa0435420:intron 35.0%
AATATACGATGCATGGATTC+AGG + chr3_2:88570823-88570842 Msa0435420:CDS 35.0%
ATATACGATGCATGGATTCA+GGG + chr3_2:88570824-88570843 Msa0435420:CDS 35.0%
TACACATACTTCTGTCCATT+AGG - chr3_2:88570928-88570947 None:intergenic 35.0%
TCAAGTATATCCACCTTCTT+GGG - chr3_2:88571029-88571048 None:intergenic 35.0%
AAGAAGGTGGATATACTTGA+GGG + chr3_2:88571029-88571048 Msa0435420:CDS 35.0%
ACAAATCTGTGTGCATGTAT+GGG - chr3_2:88571473-88571492 None:intergenic 35.0%
ATGTGAACATTCAAAAGTGG+AGG - chr3_2:88571507-88571526 None:intergenic 35.0%
!!! AGTTACCATTTTTTTCCCCA+AGG + chr3_2:88571602-88571621 Msa0435420:intron 35.0%
!!! CGCTTTGAAATAGCTTCTTT+TGG - chr3_2:88571666-88571685 None:intergenic 35.0%
TATTGCTGATAGACTTGATC+AGG + chr3_2:88571822-88571841 Msa0435420:CDS 35.0%
TCATTGCACTGAATTCACAA+AGG + chr3_2:88571890-88571909 Msa0435420:intron 35.0%
CATTGCACTGAATTCACAAA+GGG + chr3_2:88571891-88571910 Msa0435420:intron 35.0%
GAAAATAGGCTTAGATGGTT+TGG + chr3_2:88572317-88572336 Msa0435420:intron 35.0%
!! CTTCTAACAAAGGCATCTAA+GGG - chr3_2:88572359-88572378 None:intergenic 35.0%
!! TCTTCTAACAAAGGCATCTA+AGG - chr3_2:88572360-88572379 None:intergenic 35.0%
TAGAAGAGTAGATCAAATGG+AGG + chr3_2:88572373-88572392 Msa0435420:intron 35.0%
GACCTCTAAATCCTTTCTAA+TGG - chr3_2:88572450-88572469 None:intergenic 35.0%
GCTACATGCTATTACAATGT+GGG - chr3_2:88572645-88572664 None:intergenic 35.0%
!! TCTCTTAGTAAGAGTACCAT+TGG + chr3_2:88572965-88572984 Msa0435420:intron 35.0%
ATAGTTGTCTCAAATGCATC+AGG + chr3_2:88573169-88573188 Msa0435420:intron 35.0%
!! GTTTCAATGGAGGTTTTTAG+AGG + chr3_2:88573262-88573281 Msa0435420:intron 35.0%
!! TTCAATGGAGGTTTTTAGAG+GGG + chr3_2:88573264-88573283 Msa0435420:intron 35.0%
!!! AGGCACTTGAGTTTTATTCA+CGG - chr3_2:88573539-88573558 None:intergenic 35.0%
!!! TTTGCAGTTGCACCTTTTTT+TGG - chr3_2:88573574-88573593 None:intergenic 35.0%
AATAGCGAGGATGAAGTTAA+TGG + chr3_2:88573679-88573698 Msa0435420:CDS 35.0%
! TTAGAACTGCTGTTATTTGC+AGG - chr3_2:88573820-88573839 None:intergenic 35.0%
TTTCGTTGCAACTCAAAATG+CGG + chr3_2:88573912-88573931 Msa0435420:three_prime_UTR 35.0%
!!! AACCCTTTTTTGGAATGTAG+AGG + chr3_2:88573988-88574007 Msa0435420:three_prime_UTR 35.0%
AGCCTCTACATTCCAAAAAA+GGG - chr3_2:88573993-88574012 None:intergenic 35.0%
AAGCCTCTACATTCCAAAAA+AGG - chr3_2:88573994-88574013 None:intergenic 35.0%
!!! GAGGCTTAAGTTTTTTGTGA+AGG + chr3_2:88574007-88574026 Msa0435420:three_prime_UTR 35.0%
!!! CTTAAGTTTTTTGTGAAGGG+AGG + chr3_2:88574011-88574030 Msa0435420:three_prime_UTR 35.0%
!! TTTTTGTGAAGGGAGGTATA+CGG + chr3_2:88574018-88574037 Msa0435420:three_prime_UTR 35.0%
TTAAGGTTCTATTAGGCTGA+TGG - chr3_2:88574062-88574081 None:intergenic 35.0%
CCTAATAGAACCTTAATCAG+CGG + chr3_2:88574066-88574085 Msa0435420:three_prime_UTR 35.0%
TTCATCAATAACATCTCACC+AGG - chr3_2:88574099-88574118 None:intergenic 35.0%
!! AGAAGGTGTTAAGGAAATGG+CGG - chr3_2:88567090-88567109 None:intergenic 40.0%
AACAAGAGTTCACCTCCTTT+GGG - chr3_2:88567275-88567294 None:intergenic 40.0%
AAACAAGAGTTCACCTCCTT+TGG - chr3_2:88567276-88567295 None:intergenic 40.0%
GAAAGTTCAGAAACCACAGT+TGG - chr3_2:88567752-88567771 None:intergenic 40.0%
AAAATTGTTCAAGCTGGAGC+TGG + chr3_2:88567961-88567980 Msa0435420:CDS 40.0%
AAATTGTTCAAGCTGGAGCT+GGG + chr3_2:88567962-88567981 Msa0435420:CDS 40.0%
CCTCTGTAACAACTACAGTA+TGG - chr3_2:88567993-88568012 None:intergenic 40.0%
CCATACTGTAGTTGTTACAG+AGG + chr3_2:88567990-88568009 Msa0435420:CDS 40.0%
ACTGTAGTTGTTACAGAGGA+TGG + chr3_2:88567994-88568013 Msa0435420:CDS 40.0%
GATGGAAATTCCCTAGCATT+TGG + chr3_2:88568012-88568031 Msa0435420:CDS 40.0%
GAAATTCCCTAGCATTTGGA+TGG + chr3_2:88568016-88568035 Msa0435420:CDS 40.0%
GTTTGTTCCATCCAAATGCT+AGG - chr3_2:88568026-88568045 None:intergenic 40.0%
GCATTTGGATGGAACAAACA+TGG + chr3_2:88568027-88568046 Msa0435420:CDS 40.0%
! CATACCAGTTTTTGCAGAAC+CGG - chr3_2:88568064-88568083 None:intergenic 40.0%
GATCCATGCATGCATATCTT+AGG + chr3_2:88568151-88568170 Msa0435420:intron 40.0%
AAGCCTAAGATATGCATGCA+TGG - chr3_2:88568157-88568176 None:intergenic 40.0%
ATGCATGCATATCTTAGGCT+TGG + chr3_2:88568156-88568175 Msa0435420:intron 40.0%
GCTTGGTTTAGATGGTTACA+TGG + chr3_2:88568173-88568192 Msa0435420:intron 40.0%
GTTACATATGCTACATGTGG+TGG + chr3_2:88568377-88568396 Msa0435420:CDS 40.0%
TGATTCTCTATCCGTGATCA+TGG + chr3_2:88568477-88568496 Msa0435420:intron 40.0%
ATTATGATTGCTAGGACTGC+TGG + chr3_2:88568557-88568576 Msa0435420:intron 40.0%
TTATGATTGCTAGGACTGCT+GGG + chr3_2:88568558-88568577 Msa0435420:intron 40.0%
CAGATAACGAGGTATGATTG+AGG + chr3_2:88568612-88568631 Msa0435420:intron 40.0%
AGTTAAGACACTCACACCTT+GGG - chr3_2:88568668-88568687 None:intergenic 40.0%
AAGTTAAGACACTCACACCT+TGG - chr3_2:88568669-88568688 None:intergenic 40.0%
CCGATTGATCAGATGCTAAT+TGG + chr3_2:88568690-88568709 Msa0435420:intron 40.0%
GAAAGCTAGTATGAGCTCAA+TGG - chr3_2:88568735-88568754 None:intergenic 40.0%
!! TTGAGCTCATACTAGCTTTC+AGG + chr3_2:88568735-88568754 Msa0435420:intron 40.0%
!! TGAGCTCATACTAGCTTTCA+GGG + chr3_2:88568736-88568755 Msa0435420:intron 40.0%
ATGTTATCCATTGTTGAGGC+AGG + chr3_2:88568802-88568821 Msa0435420:intron 40.0%
AGACGAATATCAAGCGATCA+TGG + chr3_2:88569125-88569144 Msa0435420:intron 40.0%
GACGAATATCAAGCGATCAT+GGG + chr3_2:88569126-88569145 Msa0435420:intron 40.0%
GCATGTGGAACAAATCATAC+AGG + chr3_2:88569477-88569496 Msa0435420:CDS 40.0%
! GTGTTATTCATGTGTACAGG+TGG + chr3_2:88569675-88569694 Msa0435420:intron 40.0%
GTTATTCATGTGTACAGGTG+GGG + chr3_2:88569677-88569696 Msa0435420:intron 40.0%
TTATGGTGGTTATGGAAGGT+TGG + chr3_2:88569700-88569719 Msa0435420:intron 40.0%
AATTCTGTAGGCTAGGACAT+CGG + chr3_2:88569841-88569860 Msa0435420:intron 40.0%
GCTGAAATAATTGCATCAGG+AGG - chr3_2:88569927-88569946 None:intergenic 40.0%
CCTGCTGAAATAATTGCATC+AGG - chr3_2:88569930-88569949 None:intergenic 40.0%
CCTGATGCAATTATTTCAGC+AGG + chr3_2:88569927-88569946 Msa0435420:CDS 40.0%
CATCTCTAACACACATTCTC+TGG + chr3_2:88569989-88570008 Msa0435420:intron 40.0%
AATATGACGTGCCTCTTTCA+TGG + chr3_2:88570037-88570056 Msa0435420:intron 40.0%
GATACTGATATCATGAGGGT+TGG + chr3_2:88570204-88570223 Msa0435420:intron 40.0%
!! AGCTTAGCCTTAGAAACTCT+AGG - chr3_2:88570370-88570389 None:intergenic 40.0%
! ACTTAAGGTGCTAGCTCAAT+GGG - chr3_2:88570396-88570415 None:intergenic 40.0%
TGGGGCAAAATAAAGAACAC+CGG + chr3_2:88570629-88570648 Msa0435420:CDS 40.0%
TATACGATGCATGGATTCAG+GGG + chr3_2:88570825-88570844 Msa0435420:CDS 40.0%
TGATTCCTCGTGCATAAGTT+GGG + chr3_2:88570870-88570889 Msa0435420:CDS 40.0%
CTCAAGTATATCCACCTTCT+TGG - chr3_2:88571030-88571049 None:intergenic 40.0%
CAAGAAGGTGGATATACTTG+AGG + chr3_2:88571028-88571047 Msa0435420:CDS 40.0%
! TTGAGGGTATGCATGTAATG+AGG + chr3_2:88571045-88571064 Msa0435420:CDS 40.0%
CAGAAATTGCTTAGTAGTGG+AGG + chr3_2:88571081-88571100 Msa0435420:intron 40.0%
CAAATCTGTGTGCATGTATG+GGG - chr3_2:88571472-88571491 None:intergenic 40.0%
GACAAATCTGTGTGCATGTA+TGG - chr3_2:88571474-88571493 None:intergenic 40.0%
GAAAGCCTTGGGGAAAAAAA+TGG - chr3_2:88571610-88571629 None:intergenic 40.0%
!! TTCTCAAACAGTGTTGCTTG+TGG + chr3_2:88571763-88571782 Msa0435420:intron 40.0%
!! AAACAGTGTTGCTTGTGGTT+TGG + chr3_2:88571768-88571787 Msa0435420:intron 40.0%
!! AACAGTGTTGCTTGTGGTTT+GGG + chr3_2:88571769-88571788 Msa0435420:intron 40.0%
!! GCTTGTGATTCTGAGATGAT+AGG - chr3_2:88571864-88571883 None:intergenic 40.0%
ATGAACAAACTGACGAGAGA+AGG - chr3_2:88572098-88572117 None:intergenic 40.0%
AGACTAGACAGGATAGGATT+AGG + chr3_2:88572241-88572260 Msa0435420:intron 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG + chr3_2:88572398-88572417 Msa0435420:intron 40.0%
! CAACGAGTTGGATCCAAATA+TGG + chr3_2:88572469-88572488 Msa0435420:intron 40.0%
! AAGCCTTATCCCACTAAGTT+GGG - chr3_2:88572538-88572557 None:intergenic 40.0%
TGTACGAAACTGACTGTCAT+TGG + chr3_2:88572595-88572614 Msa0435420:intron 40.0%
CGCTACATGCTATTACAATG+TGG - chr3_2:88572646-88572665 None:intergenic 40.0%
! CGTTGATTAGCTACTCCTAT+TGG + chr3_2:88572664-88572683 Msa0435420:intron 40.0%
!!! ATTTTCTAGAGTGACTGGGT+TGG + chr3_2:88572865-88572884 Msa0435420:intron 40.0%
GGAGTGAATGAGTGCTTATT+AGG + chr3_2:88572886-88572905 Msa0435420:intron 40.0%
CAACGAAATCAGTACCAGTT+TGG - chr3_2:88573493-88573512 None:intergenic 40.0%
AACTCAAGTGCCTAAAAAGG+CGG + chr3_2:88573546-88573565 Msa0435420:CDS 40.0%
!!! TTTTTTGGTGCCGCCTTTTT+AGG - chr3_2:88573559-88573578 None:intergenic 40.0%
AAAAAGGCGGCACCAAAAAA+AGG + chr3_2:88573559-88573578 Msa0435420:CDS 40.0%
TGAAGAAAGTGACAATAGCG+AGG + chr3_2:88573666-88573685 Msa0435420:CDS 40.0%
! CCGCTGATTAAGGTTCTATT+AGG - chr3_2:88574069-88574088 None:intergenic 40.0%
GATACTACTACAGTGAGGTG+CGG - chr3_2:88567030-88567049 None:intergenic 45.0%
!! GAAGGTGTTAAGGAAATGGC+GGG - chr3_2:88567089-88567108 None:intergenic 45.0%
ACGGATCTAACGGCTAGTAT+TGG - chr3_2:88567133-88567152 None:intergenic 45.0%
! TTTTTGACCGTTACTCTCGC+CGG + chr3_2:88567188-88567207 Msa0435420:five_prime_UTR 45.0%
AGACATTTCACCGTTCACTC+CGG - chr3_2:88567210-88567229 None:intergenic 45.0%
AGAAGTTGAGAAGAAGGTCG+AGG + chr3_2:88567235-88567254 Msa0435420:CDS 45.0%
GAAGAGAATCAAGCTCCCAA+AGG + chr3_2:88567257-88567276 Msa0435420:CDS 45.0%
!!! GGAGGTGAACTCTTGTTTTG+TGG + chr3_2:88567278-88567297 Msa0435420:CDS 45.0%
AGGAGAGACCAAATTACCCT+CGG - chr3_2:88567345-88567364 None:intergenic 45.0%
CAGCATTCGATACGTTGCAT+CGG + chr3_2:88567391-88567410 Msa0435420:CDS 45.0%
AGCATTCGATACGTTGCATC+GGG + chr3_2:88567392-88567411 Msa0435420:CDS 45.0%
!! TTGAAGGGCGTTGCTATACA+TGG + chr3_2:88567587-88567606 Msa0435420:CDS 45.0%
!! TGAAGGGCGTTGCTATACAT+GGG + chr3_2:88567588-88567607 Msa0435420:CDS 45.0%
GAGATACCATTCAGCGTGAT+AGG + chr3_2:88567726-88567745 Msa0435420:CDS 45.0%
TGGAACAAACATGGACAGCT+AGG + chr3_2:88568036-88568055 Msa0435420:CDS 45.0%
AAACATGGACAGCTAGGTTC+CGG + chr3_2:88568042-88568061 Msa0435420:CDS 45.0%
!! GATGGTTACATGGTTGATGG+TGG + chr3_2:88568183-88568202 Msa0435420:intron 45.0%
!! ATGGTTGATGGTGGAGTGAA+TGG + chr3_2:88568192-88568211 Msa0435420:intron 45.0%
ATCAGATGCTAATTGGGGCT+GGG + chr3_2:88568697-88568716 Msa0435420:intron 45.0%
AAATGAGCCTGCCTCAACAA+TGG - chr3_2:88568812-88568831 None:intergenic 45.0%
! TTTTCTATATGCAGTGGCGG+TGG + chr3_2:88569562-88569581 Msa0435420:intron 45.0%
ATTCTGTAGGCTAGGACATC+GGG + chr3_2:88569842-88569861 Msa0435420:intron 45.0%
GTGAAAATATCAACACGGCG+TGG - chr3_2:88569888-88569907 None:intergenic 45.0%
GTGAATTCTGCTTGTACTGC+AGG + chr3_2:88569954-88569973 Msa0435420:CDS 45.0%
! CATTTTACAACCGACCACGA+GGG + chr3_2:88570329-88570348 Msa0435420:intron 45.0%
! ATTTTACAACCGACCACGAG+GGG + chr3_2:88570330-88570349 Msa0435420:intron 45.0%
CTCAGCACCTAGAGTTTCTA+AGG + chr3_2:88570360-88570379 Msa0435420:intron 45.0%
! CACTTAAGGTGCTAGCTCAA+TGG - chr3_2:88570397-88570416 None:intergenic 45.0%
TGAGCTAGCACCTTAAGTGT+AGG + chr3_2:88570398-88570417 Msa0435420:intron 45.0%
TAAAGAACACCGGTGATGAC+TGG + chr3_2:88570639-88570658 Msa0435420:CDS 45.0%
GATGTACCCTAAGCCTCTAA+TGG + chr3_2:88570661-88570680 Msa0435420:CDS 45.0%
CGGTTGGAATATACGATGCA+TGG + chr3_2:88570816-88570835 Msa0435420:CDS 45.0%
ATACGATGCATGGATTCAGG+GGG + chr3_2:88570826-88570845 Msa0435420:CDS 45.0%
! GGGGTATGCACCATTTTGTT+GGG + chr3_2:88570845-88570864 Msa0435420:CDS 45.0%
! GGGTATGCACCATTTTGTTG+GGG + chr3_2:88570846-88570865 Msa0435420:CDS 45.0%
AGGAATCAGCCCCAACAAAA+TGG - chr3_2:88570858-88570877 None:intergenic 45.0%
CTGATTCCTCGTGCATAAGT+TGG + chr3_2:88570869-88570888 Msa0435420:CDS 45.0%
GATTCCTCGTGCATAAGTTG+GGG + chr3_2:88570871-88570890 Msa0435420:CDS 45.0%
GGAACAGCTGAAGACCTAAA+GGG - chr3_2:88571008-88571027 None:intergenic 45.0%
AGCTTACTGAGAAAGCCTTG+GGG - chr3_2:88571620-88571639 None:intergenic 45.0%
CAGCTTACTGAGAAAGCCTT+GGG - chr3_2:88571621-88571640 None:intergenic 45.0%
! TTGTGGTTTGGGTCATTCCA+TGG + chr3_2:88571780-88571799 Msa0435420:CDS 45.0%
TTTGGGTCATTCCATGGTTG+TGG + chr3_2:88571786-88571805 Msa0435420:CDS 45.0%
! AAGTAAGTGTAGCGGAGATG+TGG + chr3_2:88572196-88572215 Msa0435420:intron 45.0%
GATGAGTGGTAAGACTAGAC+AGG + chr3_2:88572230-88572249 Msa0435420:intron 45.0%
GTGGTAAGACTAGACAGGAT+AGG + chr3_2:88572235-88572254 Msa0435420:intron 45.0%
TGACACCATTAGAGAGAGAG+TGG + chr3_2:88572266-88572285 Msa0435420:intron 45.0%
GACACCATTAGAGAGAGAGT+GGG + chr3_2:88572267-88572286 Msa0435420:intron 45.0%
ACACCATTAGAGAGAGAGTG+GGG + chr3_2:88572268-88572287 Msa0435420:intron 45.0%
AGATCAAATGGAGGAGAGTC+AGG + chr3_2:88572382-88572401 Msa0435420:intron 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG + chr3_2:88572392-88572411 Msa0435420:intron 45.0%
GGATTTAGAGGTCAACGAGT+TGG + chr3_2:88572457-88572476 Msa0435420:intron 45.0%
! CTTATCCCACTAAGTTGGGT+CGG - chr3_2:88572534-88572553 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+TGG - chr3_2:88572539-88572558 None:intergenic 45.0%
CAACTTAGTGGGATAAGGCT+TGG + chr3_2:88572537-88572556 Msa0435420:intron 45.0%
AGAGTAAGTGATGTGACTCG+TGG + chr3_2:88572927-88572946 Msa0435420:intron 45.0%
GAGTAAGTGATGTGACTCGT+GGG + chr3_2:88572928-88572947 Msa0435420:intron 45.0%
AGTAAGTGATGTGACTCGTG+GGG + chr3_2:88572929-88572948 Msa0435420:intron 45.0%
CTGCAGCTTGATACACATGA+TGG + chr3_2:88573069-88573088 Msa0435420:intron 45.0%
ACACATGATGGCAAAGCTGT+TGG + chr3_2:88573081-88573100 Msa0435420:CDS 45.0%
TTGAAAGGGAGAGTCTTGGA+GGG - chr3_2:88573432-88573451 None:intergenic 45.0%
TTTGAAAGGGAGAGTCTTGG+AGG - chr3_2:88573433-88573452 None:intergenic 45.0%
!!! GGTTTTGAAAGGGAGAGTCT+TGG - chr3_2:88573436-88573455 None:intergenic 45.0%
TTTCGTTGTGTTCTTGCTGC+AGG + chr3_2:88573505-88573524 Msa0435420:intron 45.0%
AAGCTGACAGCTCAAAGAAG+AGG + chr3_2:88573596-88573615 Msa0435420:CDS 45.0%
CTCAGAAGAAGAGCAAGAAG+AGG + chr3_2:88573642-88573661 Msa0435420:CDS 45.0%
CGAGGATGAAGTTAATGGTG+AGG + chr3_2:88573684-88573703 Msa0435420:CDS 45.0%
TGAAGTTAATGGTGAGGCTG+AGG + chr3_2:88573690-88573709 Msa0435420:CDS 45.0%
GCTGAGGTTAAAACATCACG+TGG + chr3_2:88573706-88573725 Msa0435420:CDS 45.0%
GAGGTTAAAACATCACGTGG+TGG + chr3_2:88573709-88573728 Msa0435420:CDS 45.0%
! TCACGTGGTGGAAAAAGTTC+TGG + chr3_2:88573721-88573740 Msa0435420:CDS 45.0%
! TGGTGGAAAAAGTTCTGGCA+AGG + chr3_2:88573726-88573745 Msa0435420:CDS 45.0%
! GGTGGAAAAAGTTCTGGCAA+GGG + chr3_2:88573727-88573746 Msa0435420:CDS 45.0%
TCTTCTCCAGTGAAGTCAAC+TGG + chr3_2:88573841-88573860 Msa0435420:CDS 45.0%
! CTCTTACCAGTTGACTTCAC+TGG - chr3_2:88573850-88573869 None:intergenic 45.0%
GTGAAGTCAACTGGTAAGAG+AGG + chr3_2:88573850-88573869 Msa0435420:CDS 45.0%
GGCTGATGGAAAACTGAAGA+AGG - chr3_2:88574048-88574067 None:intergenic 45.0%
ATAGAACCTTAATCAGCGGC+TGG + chr3_2:88574070-88574089 Msa0435420:three_prime_UTR 45.0%
!!! AAAGTATTATATATTTATTT+TGG + chr3_2:88570786-88570805 Msa0435420:intron 5.0%
!!! AATATTTTTTTATATAACAA+TGG + chr3_2:88571410-88571429 Msa0435420:intron 5.0%
!! AAAAAAAAAATATATAAGTT+AGG - chr3_2:88573045-88573064 None:intergenic 5.0%
GCGCAGATACTACTACAGTG+AGG - chr3_2:88567035-88567054 None:intergenic 50.0%
ATGAGGGGAGAGAAGGAGAT+TGG - chr3_2:88567062-88567081 None:intergenic 50.0%
! GAAATGGCGGGAAAGATGAG+GGG - chr3_2:88567077-88567096 None:intergenic 50.0%
! GGAAATGGCGGGAAAGATGA+GGG - chr3_2:88567078-88567097 None:intergenic 50.0%
! AGGAAATGGCGGGAAAGATG+AGG - chr3_2:88567079-88567098 None:intergenic 50.0%
GAGAATCAAGCTCCCAAAGG+AGG + chr3_2:88567260-88567279 Msa0435420:CDS 50.0%
GATATCGTTGGTCGTCGCAA+AGG + chr3_2:88567314-88567333 Msa0435420:CDS 50.0%
! TTCGTGTCATTGCGTGGCAT+TGG + chr3_2:88567561-88567580 Msa0435420:CDS 50.0%
!! GAAGGGCGTTGCTATACATG+GGG + chr3_2:88567589-88567608 Msa0435420:CDS 50.0%
!! AAGGGCGTTGCTATACATGG+GGG + chr3_2:88567590-88567609 Msa0435420:CDS 50.0%
! CTATACATGGGGGCGTAATG+AGG + chr3_2:88567600-88567619 Msa0435420:CDS 50.0%
TGTTGTGCAGAAAGGGCAAC+TGG + chr3_2:88567697-88567716 Msa0435420:intron 50.0%
GTTGTGCAGAAAGGGCAACT+GGG + chr3_2:88567698-88567717 Msa0435420:intron 50.0%
! AGTTGGCCTATCACGCTGAA+TGG - chr3_2:88567735-88567754 None:intergenic 50.0%
GGTTCCGGTTCTGCAAAAAC+TGG + chr3_2:88568057-88568076 Msa0435420:CDS 50.0%
CGACACAAGACAGCGAATAG+GGG - chr3_2:88568354-88568373 None:intergenic 50.0%
CCGACACAAGACAGCGAATA+GGG - chr3_2:88568355-88568374 None:intergenic 50.0%
CCCTATTCGCTGTCTTGTGT+CGG + chr3_2:88568352-88568371 Msa0435420:CDS 50.0%
TCCGACACAAGACAGCGAAT+AGG - chr3_2:88568356-88568375 None:intergenic 50.0%
GTGTGGCTATCTTCAGTCGA+AGG + chr3_2:88568410-88568429 Msa0435420:CDS 50.0%
TTCCACAGTATGGGCAGCTT+GGG + chr3_2:88568582-88568601 Msa0435420:CDS 50.0%
TGGGCATGGAACAGATAACG+AGG + chr3_2:88568601-88568620 Msa0435420:CDS 50.0%
GATCAGATGCTAATTGGGGC+TGG + chr3_2:88568696-88568715 Msa0435420:intron 50.0%
GAGCAATAGCTTCCCTTGCT+GGG + chr3_2:88569436-88569455 Msa0435420:CDS 50.0%
AGCAATAGCTTCCCTTGCTG+GGG + chr3_2:88569437-88569456 Msa0435420:CDS 50.0%
GACAATGGTTTCCCCAGCAA+GGG - chr3_2:88569451-88569470 None:intergenic 50.0%
TGACAATGGTTTCCCCAGCA+AGG - chr3_2:88569452-88569471 None:intergenic 50.0%
TGCTGGGGAAACCATTGTCA+AGG + chr3_2:88569452-88569471 Msa0435420:CDS 50.0%
TGGGGAAACCATTGTCAAGG+TGG + chr3_2:88569455-88569474 Msa0435420:CDS 50.0%
ACCATTGTCAAGGTGGCATG+TGG + chr3_2:88569462-88569481 Msa0435420:CDS 50.0%
TCCACATGCCACCTTGACAA+TGG - chr3_2:88569466-88569485 None:intergenic 50.0%
CATGTGTACAGGTGGGGTTA+TGG + chr3_2:88569683-88569702 Msa0435420:intron 50.0%
AGGTGGGGTTATGGTGGTTA+TGG + chr3_2:88569692-88569711 Msa0435420:intron 50.0%
GGGGTTATGGTGGTTATGGA+AGG + chr3_2:88569696-88569715 Msa0435420:CDS 50.0%
! GGTGGTTATGGAAGGTTGGT+TGG + chr3_2:88569704-88569723 Msa0435420:intron 50.0%
ACAGCCATCAGCCATGAAAG+AGG - chr3_2:88570051-88570070 None:intergenic 50.0%
CCTCGTGGTCGGTTGTAAAA+TGG - chr3_2:88570331-88570350 None:intergenic 50.0%
! CCATTTTACAACCGACCACG+AGG + chr3_2:88570328-88570347 Msa0435420:intron 50.0%
AGTTTGAATCCCCTCGTGGT+CGG - chr3_2:88570342-88570361 None:intergenic 50.0%
TGGAGGGCAGCTGTATATGT+GGG + chr3_2:88570610-88570629 Msa0435420:CDS 50.0%
AGGGTACATCCAGTCATCAC+CGG - chr3_2:88570651-88570670 None:intergenic 50.0%
!! GGGGGTATGCACCATTTTGT+TGG + chr3_2:88570844-88570863 Msa0435420:CDS 50.0%
ATGACCCCAACTTATGCACG+AGG - chr3_2:88570878-88570897 None:intergenic 50.0%
AGTTGGGGTCATGCTCAGAA+TGG + chr3_2:88570886-88570905 Msa0435420:CDS 50.0%
TCATGCTCAGAATGGAGAGC+TGG + chr3_2:88570894-88570913 Msa0435420:CDS 50.0%
CATGCTCAGAATGGAGAGCT+GGG + chr3_2:88570895-88570914 Msa0435420:CDS 50.0%
CAGAATGGAGAGCTGGGATA+CGG + chr3_2:88570901-88570920 Msa0435420:CDS 50.0%
CCTAAAGGGCAAGTGCAAAC+AGG - chr3_2:88570994-88571013 None:intergenic 50.0%
CCTGTTTGCACTTGCCCTTT+AGG + chr3_2:88570991-88571010 Msa0435420:intron 50.0%
GGGAACAGCTGAAGACCTAA+AGG - chr3_2:88571009-88571028 None:intergenic 50.0%
GTCTTCAGCTGTTCCCAAGA+AGG + chr3_2:88571013-88571032 Msa0435420:CDS 50.0%
TTCAGCTGTTCCCAAGAAGG+TGG + chr3_2:88571016-88571035 Msa0435420:CDS 50.0%
! GTGTGCATGTATGGGGCATT+TGG - chr3_2:88571465-88571484 None:intergenic 50.0%
GCAGCTTACTGAGAAAGCCT+TGG - chr3_2:88571622-88571641 None:intergenic 50.0%
TGCTCTGTCAACCACAACCA+TGG - chr3_2:88571800-88571819 None:intergenic 50.0%
TGGATGTTGCACTGGATGAG+TGG + chr3_2:88572216-88572235 Msa0435420:intron 50.0%
CACCATTAGAGAGAGAGTGG+GGG + chr3_2:88572269-88572288 Msa0435420:intron 50.0%
TACCCCCACTCTCTCTCTAA+TGG - chr3_2:88572274-88572293 None:intergenic 50.0%
! ACTAAGTTGGGTCGGCTACA+TGG - chr3_2:88572526-88572545 None:intergenic 50.0%
ATGTAGCCGACCCAACTTAG+TGG + chr3_2:88572525-88572544 Msa0435420:intron 50.0%
TGTAGCCGACCCAACTTAGT+GGG + chr3_2:88572526-88572545 Msa0435420:intron 50.0%
CGACCCAACTTAGTGGGATA+AGG + chr3_2:88572532-88572551 Msa0435420:intron 50.0%
! GATGGCAAAGCTGTTGGTGA+AGG + chr3_2:88573087-88573106 Msa0435420:CDS 50.0%
AGTCTGGTCTGTGTCCAAAC+TGG + chr3_2:88573476-88573495 Msa0435420:intron 50.0%
! GAAAAAGTTCTGGCAAGGGC+CGG + chr3_2:88573731-88573750 Msa0435420:CDS 50.0%
! AAAAAGTTCTGGCAAGGGCC+GGG + chr3_2:88573732-88573751 Msa0435420:CDS 50.0%
ACACTTTGGATGCCTTACCC+CGG - chr3_2:88573753-88573772 None:intergenic 50.0%
! GGGTAAGGCATCCAAAGTGT+CGG + chr3_2:88573753-88573772 Msa0435420:CDS 50.0%
!! ATCCAAAGTGTCGGAGTCTG+AGG + chr3_2:88573762-88573781 Msa0435420:CDS 50.0%
!! TCCAAAGTGTCGGAGTCTGA+GGG + chr3_2:88573763-88573782 Msa0435420:CDS 50.0%
GGGAAAGATGAGGGGAGAGA+AGG - chr3_2:88567069-88567088 None:intergenic 55.0%
GTTCACTCCGGCGAGAGTAA+CGG - chr3_2:88567198-88567217 None:intergenic 55.0%
GTTACTCTCGCCGGAGTGAA+CGG + chr3_2:88567197-88567216 Msa0435420:five_prime_UTR 55.0%
!!! TGTTTTGTGGTGCCACGTGC+TGG + chr3_2:88567291-88567310 Msa0435420:CDS 55.0%
!!! GTTTTGTGGTGCCACGTGCT+GGG + chr3_2:88567292-88567311 Msa0435420:CDS 55.0%
ACCAACGATATCCCAGCACG+TGG - chr3_2:88567306-88567325 None:intergenic 55.0%
AGGTCCTGCCGAGGGTAATT+TGG + chr3_2:88567334-88567353 Msa0435420:CDS 55.0%
GAGACCAAATTACCCTCGGC+AGG - chr3_2:88567341-88567360 None:intergenic 55.0%
! TGCAGCTTCGTGTCATTGCG+TGG + chr3_2:88567555-88567574 Msa0435420:intron 55.0%
! TGCGTGGCATTGGACGTTGA+AGG + chr3_2:88567571-88567590 Msa0435420:CDS 55.0%
! GCGTGGCATTGGACGTTGAA+GGG + chr3_2:88567572-88567591 Msa0435420:CDS 55.0%
CAGAAAGGGCAACTGGGTCA+TGG + chr3_2:88567704-88567723 Msa0435420:intron 55.0%
TCAGCGTGATAGGCCAACTG+TGG + chr3_2:88567736-88567755 Msa0435420:CDS 55.0%
!! GTGGTGGCGACTTTTCTGTG+TGG + chr3_2:88568393-88568412 Msa0435420:CDS 55.0%
ACTGCTGGGCTTCCACAGTA+TGG + chr3_2:88568572-88568591 Msa0435420:CDS 55.0%
CTGCTGGGCTTCCACAGTAT+GGG + chr3_2:88568573-88568592 Msa0435420:CDS 55.0%
CTTCCACAGTATGGGCAGCT+TGG + chr3_2:88568581-88568600 Msa0435420:CDS 55.0%
GAAGCTATTGCTCGAGGACG+TGG - chr3_2:88569429-88569448 None:intergenic 55.0%
GCAAGGGAAGCTATTGCTCG+AGG - chr3_2:88569435-88569454 None:intergenic 55.0%
CGAGCAATAGCTTCCCTTGC+TGG + chr3_2:88569435-88569454 Msa0435420:CDS 55.0%
GCAGTGGCGGTGGATAAGAA+TGG + chr3_2:88569572-88569591 Msa0435420:intron 55.0%
GTGTACAGGTGGGGTTATGG+TGG + chr3_2:88569686-88569705 Msa0435420:intron 55.0%
CGTGCCTCTTTCATGGCTGA+TGG + chr3_2:88570044-88570063 Msa0435420:intron 55.0%
GCTGAGTTTGAATCCCCTCG+TGG - chr3_2:88570346-88570365 None:intergenic 55.0%
CTGGAGGGCAGCTGTATATG+TGG + chr3_2:88570609-88570628 Msa0435420:CDS 55.0%
GGAGGGCAGCTGTATATGTG+GGG + chr3_2:88570611-88570630 Msa0435420:CDS 55.0%
GAGCTGGGATACGGACCTAA+TGG + chr3_2:88570910-88570929 Msa0435420:CDS 55.0%
CGGAGATGTGGATGTTGCAC+TGG + chr3_2:88572208-88572227 Msa0435420:intron 55.0%
! AAAAGTTCTGGCAAGGGCCG+GGG + chr3_2:88573733-88573752 Msa0435420:CDS 55.0%
ACCCTCAGACTCCGACACTT+TGG - chr3_2:88573767-88573786 None:intergenic 55.0%
GTGTCGGAGTCTGAGGGTAA+AGG + chr3_2:88573769-88573788 Msa0435420:CDS 55.0%
GAGTCTGAGGGTAAAGGCTC+TGG + chr3_2:88573775-88573794 Msa0435420:CDS 55.0%
! AGGTCACCAGCCGCTGATTA+AGG - chr3_2:88574079-88574098 None:intergenic 55.0%
TTAATCAGCGGCTGGTGACC+TGG + chr3_2:88574078-88574097 Msa0435420:three_prime_UTR 55.0%
GCCACGTGCTGGGATATCGT+TGG + chr3_2:88567302-88567321 Msa0435420:CDS 60.0%
TGCTGATGCCGACGAGAGGA+CGG - chr3_2:88567376-88567395 None:intergenic 60.0%
CGAATGCTGATGCCGACGAG+AGG - chr3_2:88567380-88567399 None:intergenic 60.0%
CGATACGTTGCATCGGGCTG+CGG + chr3_2:88567398-88567417 Msa0435420:CDS 60.0%
TGCCCAAGCTGCCCATACTG+TGG - chr3_2:88568587-88568606 None:intergenic 60.0%
CAGTATGGGCAGCTTGGGCA+TGG + chr3_2:88568587-88568606 Msa0435420:CDS 60.0%
GCTAGGACATCGGGAGCAGA+AGG + chr3_2:88569851-88569870 Msa0435420:CDS 60.0%
TCGTCGCAAAGGTCCTGCCG+AGG + chr3_2:88567325-88567344 Msa0435420:CDS 65.0%
CGTCGCAAAGGTCCTGCCGA+GGG + chr3_2:88567326-88567345 Msa0435420:CDS 65.0%
TGATGCCGACGAGAGGACGG+AGG - chr3_2:88567373-88567392 None:intergenic 65.0%
TTCTGGCAAGGGCCGGGGTA+AGG + chr3_2:88573738-88573757 Msa0435420:CDS 65.0%
! GAGGGTAAAGGCTCTGGCCG+AGG + chr3_2:88573781-88573800 Msa0435420:CDS 65.0%
! AAAGGCTCTGGCCGAGGACG+TGG + chr3_2:88573787-88573806 Msa0435420:CDS 65.0%
ACGAGAGGACGGAGGCGGGA+AGG - chr3_2:88567365-88567384 None:intergenic 70.0%
TCCCGCCTCCGTCCTCTCGT+CGG + chr3_2:88567365-88567384 Msa0435420:CDS 70.0%
TGCCGACGAGAGGACGGAGG+CGG - chr3_2:88567370-88567389 None:intergenic 70.0%
! CAGGAGCGCGACCACGTCCT+CGG - chr3_2:88573801-88573820 None:intergenic 70.0%
GCCGACGAGAGGACGGAGGC+GGG - chr3_2:88567369-88567388 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 88566988 88574193 88566988 ID=Msa0435420;Name=Msa0435420
chr3_2 mRNA 88566988 88574193 88566988 ID=Msa0435420-mRNA-1;Parent=Msa0435420;Name=Msa0435420-mRNA-1;_AED=0.09;_eAED=0.09;_QI=236|1|1|1|1|1|16|302|543
chr3_2 exon 88566988 88567419 88566988 ID=Msa0435420-mRNA-1:exon:26041;Parent=Msa0435420-mRNA-1
chr3_2 exon 88567560 88567621 88567560 ID=Msa0435420-mRNA-1:exon:26042;Parent=Msa0435420-mRNA-1
chr3_2 exon 88567707 88567774 88567707 ID=Msa0435420-mRNA-1:exon:26043;Parent=Msa0435420-mRNA-1
chr3_2 exon 88567957 88568078 88567957 ID=Msa0435420-mRNA-1:exon:26044;Parent=Msa0435420-mRNA-1
chr3_2 exon 88568339 88568444 88568339 ID=Msa0435420-mRNA-1:exon:26045;Parent=Msa0435420-mRNA-1
chr3_2 exon 88568571 88568622 88568571 ID=Msa0435420-mRNA-1:exon:26046;Parent=Msa0435420-mRNA-1
chr3_2 exon 88569381 88569498 88569381 ID=Msa0435420-mRNA-1:exon:26047;Parent=Msa0435420-mRNA-1
chr3_2 exon 88569576 88569606 88569576 ID=Msa0435420-mRNA-1:exon:26048;Parent=Msa0435420-mRNA-1
chr3_2 exon 88569694 88569717 88569694 ID=Msa0435420-mRNA-1:exon:26049;Parent=Msa0435420-mRNA-1
chr3_2 exon 88569851 88569975 88569851 ID=Msa0435420-mRNA-1:exon:26050;Parent=Msa0435420-mRNA-1
chr3_2 exon 88570609 88570690 88570609 ID=Msa0435420-mRNA-1:exon:26051;Parent=Msa0435420-mRNA-1
chr3_2 exon 88570816 88570938 88570816 ID=Msa0435420-mRNA-1:exon:26052;Parent=Msa0435420-mRNA-1
chr3_2 exon 88571013 88571066 88571013 ID=Msa0435420-mRNA-1:exon:26053;Parent=Msa0435420-mRNA-1
chr3_2 exon 88571774 88571843 88571774 ID=Msa0435420-mRNA-1:exon:26054;Parent=Msa0435420-mRNA-1
chr3_2 exon 88573075 88573108 88573075 ID=Msa0435420-mRNA-1:exon:26055;Parent=Msa0435420-mRNA-1
chr3_2 exon 88573527 88574193 88573527 ID=Msa0435420-mRNA-1:exon:26056;Parent=Msa0435420-mRNA-1
chr3_2 five_prime_UTR 88566988 88567223 88566988 ID=Msa0435420-mRNA-1:five_prime_utr;Parent=Msa0435420-mRNA-1
chr3_2 CDS 88567224 88567419 88567224 ID=Msa0435420-mRNA-1:cds;Parent=Msa0435420-mRNA-1
chr3_2 CDS 88567560 88567621 88567560 ID=Msa0435420-mRNA-1:cds;Parent=Msa0435420-mRNA-1
chr3_2 CDS 88567707 88567774 88567707 ID=Msa0435420-mRNA-1:cds;Parent=Msa0435420-mRNA-1
chr3_2 CDS 88567957 88568078 88567957 ID=Msa0435420-mRNA-1:cds;Parent=Msa0435420-mRNA-1
chr3_2 CDS 88568339 88568444 88568339 ID=Msa0435420-mRNA-1:cds;Parent=Msa0435420-mRNA-1
chr3_2 CDS 88568571 88568622 88568571 ID=Msa0435420-mRNA-1:cds;Parent=Msa0435420-mRNA-1
chr3_2 CDS 88569381 88569498 88569381 ID=Msa0435420-mRNA-1:cds;Parent=Msa0435420-mRNA-1
chr3_2 CDS 88569576 88569606 88569576 ID=Msa0435420-mRNA-1:cds;Parent=Msa0435420-mRNA-1
chr3_2 CDS 88569694 88569717 88569694 ID=Msa0435420-mRNA-1:cds;Parent=Msa0435420-mRNA-1
chr3_2 CDS 88569851 88569975 88569851 ID=Msa0435420-mRNA-1:cds;Parent=Msa0435420-mRNA-1
chr3_2 CDS 88570609 88570690 88570609 ID=Msa0435420-mRNA-1:cds;Parent=Msa0435420-mRNA-1
chr3_2 CDS 88570816 88570938 88570816 ID=Msa0435420-mRNA-1:cds;Parent=Msa0435420-mRNA-1
chr3_2 CDS 88571013 88571066 88571013 ID=Msa0435420-mRNA-1:cds;Parent=Msa0435420-mRNA-1
chr3_2 CDS 88571774 88571843 88571774 ID=Msa0435420-mRNA-1:cds;Parent=Msa0435420-mRNA-1
chr3_2 CDS 88573075 88573108 88573075 ID=Msa0435420-mRNA-1:cds;Parent=Msa0435420-mRNA-1
chr3_2 CDS 88573527 88573891 88573527 ID=Msa0435420-mRNA-1:cds;Parent=Msa0435420-mRNA-1
chr3_2 three_prime_UTR 88573892 88574193 88573892 ID=Msa0435420-mRNA-1:three_prime_utr;Parent=Msa0435420-mRNA-1
Gene Sequence

>Msa0435420

ATGTCTACATCAGAAGTTGAGAAGAAGGTCGAGGAAGAGAATCAAGCTCCCAAAGGAGGTGAACTCTTGTTTTGTGGTGCCACGTGCTGGGATATCGTTGGTCGTCGCAAAGGTCCTGCCGAGGGTAATTTGGTCTCTCCTTCCCGCCTCCGTCCTCTCGTCGGCATCAGCATTCGATACGTTGCATCGGGCTGCGCTTCGTGTCATTGCGTGGCATTGGACGTTGAAGGGCGTTGCTATACATGGGGGCGTAATGAGAAAGGGCAACTGGGTCATGGAGATACCATTCAGCGTGATAGGCCAACTGTGGTTTCTGAACTTTCAAAATACAAAATTGTTCAAGCTGGAGCTGGGAAGAGCCATACTGTAGTTGTTACAGAGGATGGAAATTCCCTAGCATTTGGATGGAACAAACATGGACAGCTAGGTTCCGGTTCTGCAAAAACTGAAATTGAATCATCCCCTATTCGCTGTCTTGTGTCGGAAGTTACATATGCTACATGTGGTGGCGACTTTTCTGTGTGGCTATCTTCAGTCGAAGGATCTTCTATACTGACTGCTGGGCTTCCACAGTATGGGCAGCTTGGGCATGGAACAGATAACGAGTATAATTCCAAAGACAGTTCTGTGAAATTAGTTTATGAAGCACAGCCACGTCCTCGAGCAATAGCTTCCCTTGCTGGGGAAACCATTGTCAAGGTGGCATGTGGAACAAATCATACAGTGGCGGTGGATAAGAATGGTTTTGTCTACACGTGGGGTTATGGTGGTTATGGAAGGCTAGGACATCGGGAGCAGAAGGATGAATTCGCTCCACGCCGTGTTGATATTTTCACGAATAGAAACGTGTTGCCTCCTGATGCAATTATTTCAGCAGGTTCTGTGAATTCTGCTTGTACTGCAGCTGGAGGGCAGCTGTATATGTGGGGCAAAATAAAGAACACCGGTGATGACTGGATGTACCCTAAGCCTCTAATGGATTTAAGCGGTTGGAATATACGATGCATGGATTCAGGGGGTATGCACCATTTTGTTGGGGCTGATTCCTCGTGCATAAGTTGGGGTCATGCTCAGAATGGAGAGCTGGGATACGGACCTAATGGACAGAAGTCTTCAGCTGTTCCCAAGAAGGTGGATATACTTGAGGGTATGCATGTAATGAGTGTTGCTTGTGGTTTGGGTCATTCCATGGTTGTGGTTGACAGAGCAAATATTGCTGATAGACTTGATCAGCTTGATACACATGATGGCAAAGCTGTTGGTGAAGGTAATGAGACCGTGAATAAAACTCAAGTGCCTAAAAAGGCGGCACCAAAAAAAGGTGCAACTGCAAAGAAAGCTGACAGCTCAAAGAAGAGGAAAAAAGCAAAAGATGCATCTGACTCAGAAGAAGAGCAAGAAGAGGCTGAAGAAAGTGACAATAGCGAGGATGAAGTTAATGGTGAGGCTGAGGTTAAAACATCACGTGGTGGAAAAAGTTCTGGCAAGGGCCGGGGTAAGGCATCCAAAGTGTCGGAGTCTGAGGGTAAAGGCTCTGGCCGAGGACGTGGTCGCGCTCCTGCAAATAACAGCAGTTCTAAATCTTCTCCAGTGAAGTCAACTGGTAAGAGAGGAAGACCCAGAAAGTCATGA
Protein sequence

>Msa0435420

MSTSEVEKKVEEENQAPKGGELLFCGATCWDIVGRRKGPAEGNLVSPSRLRPLVGISIRYVASGCASCHCVALDVEGRCYTWGRNEKGQLGHGDTIQRDRPTVVSELSKYKIVQAGAGKSHTVVVTEDGNSLAFGWNKHGQLGSGSAKTEIESSPIRCLVSEVTYATCGGDFSVWLSSVEGSSILTAGLPQYGQLGHGTDNEYNSKDSSVKLVYEAQPRPRAIASLAGETIVKVACGTNHTVAVDKNGFVYTWGYGGYGRLGHREQKDEFAPRRVDIFTNRNVLPPDAIISAGSVNSACTAAGGQLYMWGKIKNTGDDWMYPKPLMDLSGWNIRCMDSGGMHHFVGADSSCISWGHAQNGELGYGPNGQKSSAVPKKVDILEGMHVMSVACGLGHSMVVVDRANIADRLDQLDTHDGKAVGEGNETVNKTQVPKKAAPKKGATAKKADSSKKRKKAKDASDSEEEQEEAEESDNSEDEVNGEAEVKTSRGGKSSGKGRGKASKVSESEGKGSGRGRGRAPANNSSSKSSPVKSTGKRGRPRKS*