Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1258710 | GAU44984.1 | 91.429 | 455 | 33 | 3 | 1 | 453 | 1 | 451 | 0.0 | 844 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1258710 | sp|Q9SZX3|ASSY_ARATH | 75.587 | 426 | 74 | 5 | 53 | 451 | 70 | 492 | 0.0 | 648 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1258710 | A0A2Z6NKP2 | 91.429 | 455 | 33 | 3 | 1 | 453 | 1 | 451 | 0.0 | 844 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012940 | Msa1258710 | 0.802474 | 5.514862e-49 | -8.615850e-47 |
| Msa0032920 | Msa1258710 | -0.828103 | 1.082732e-54 | -8.615850e-47 |
| Msa0036850 | Msa1258710 | 0.822335 | 2.502763e-53 | -8.615850e-47 |
| Msa0040690 | Msa1258710 | 0.808434 | 3.103409e-50 | -8.615850e-47 |
| Msa0043670 | Msa1258710 | -0.809108 | 2.227365e-50 | -8.615850e-47 |
| Msa0045730 | Msa1258710 | 0.804752 | 1.857312e-49 | -8.615850e-47 |
| Msa0046830 | Msa1258710 | 0.814910 | 1.211085e-51 | -8.615850e-47 |
| Msa0048180 | Msa1258710 | 0.820724 | 5.897549e-53 | -8.615850e-47 |
| Msa0052610 | Msa1258710 | 0.838644 | 2.543578e-57 | -8.615850e-47 |
| Msa0057710 | Msa1258710 | 0.801624 | 8.248371e-49 | -8.615850e-47 |
| Msa0074320 | Msa1258710 | 0.845008 | 5.306675e-59 | -8.615850e-47 |
| Msa0076040 | Msa1258710 | 0.827202 | 1.781961e-54 | -8.615850e-47 |
| Msa0081070 | Msa1258710 | 0.832451 | 9.381200e-56 | -8.615850e-47 |
| Msa0092670 | Msa1258710 | -0.819066 | 1.411432e-52 | -8.615850e-47 |
| Msa0092690 | Msa1258710 | -0.829498 | 4.976848e-55 | -8.615850e-47 |
| Msa0092740 | Msa1258710 | -0.837595 | 4.736858e-57 | -8.615850e-47 |
| Msa0093850 | Msa1258710 | 0.832226 | 1.066570e-55 | -8.615850e-47 |
| Msa0098470 | Msa1258710 | 0.819055 | 1.419792e-52 | -8.615850e-47 |
| Msa0116130 | Msa1258710 | 0.820345 | 7.206086e-53 | -8.615850e-47 |
| Msa0116670 | Msa1258710 | 0.816090 | 6.614839e-52 | -8.615850e-47 |
| Msa0118710 | Msa1258710 | 0.820690 | 6.004632e-53 | -8.615850e-47 |
| Msa0615440 | Msa1258710 | 0.801648 | 8.154714e-49 | -8.615850e-47 |
| Msa0620990 | Msa1258710 | 0.897013 | 2.120189e-76 | -8.615850e-47 |
| Msa0623200 | Msa1258710 | 0.819785 | 9.676069e-53 | -8.615850e-47 |
| Msa0631250 | Msa1258710 | 0.816447 | 5.505775e-52 | -8.615850e-47 |
| Msa0654870 | Msa1258710 | 0.811411 | 7.095123e-51 | -8.615850e-47 |
| Msa0657790 | Msa1258710 | 0.800374 | 1.485425e-48 | -8.615850e-47 |
| Msa0659030 | Msa1258710 | 0.851019 | 1.165685e-60 | -8.615850e-47 |
| Msa0666230 | Msa1258710 | 0.823871 | 1.096752e-53 | -8.615850e-47 |
| Msa0687870 | Msa1258710 | 0.822999 | 1.753309e-53 | -8.615850e-47 |
| Msa0698660 | Msa1258710 | 0.802018 | 6.845033e-49 | -8.615850e-47 |
| Msa0705000 | Msa1258710 | 0.859511 | 3.931872e-63 | -8.615850e-47 |
| Msa0705040 | Msa1258710 | 0.850936 | 1.230300e-60 | -8.615850e-47 |
| Msa0709780 | Msa1258710 | 0.880024 | 7.714315e-70 | -8.615850e-47 |
| Msa0719400 | Msa1258710 | 0.825247 | 5.202966e-54 | -8.615850e-47 |
| Msa0738040 | Msa1258710 | 0.825729 | 3.998240e-54 | -8.615850e-47 |
| Msa0738100 | Msa1258710 | 0.821402 | 4.114491e-53 | -8.615850e-47 |
| Msa0739080 | Msa1258710 | 0.814186 | 1.751569e-51 | -8.615850e-47 |
| Msa0750920 | Msa1258710 | 0.827156 | 1.828114e-54 | -8.615850e-47 |
| Msa0772230 | Msa1258710 | 0.816634 | 4.997883e-52 | -8.615850e-47 |
| Msa0785130 | Msa1258710 | 0.843461 | 1.381819e-58 | -8.615850e-47 |
| Msa0788770 | Msa1258710 | 0.838260 | 3.196162e-57 | -8.615850e-47 |
| Msa0789650 | Msa1258710 | 0.826018 | 3.415035e-54 | -8.615850e-47 |
| Msa0790400 | Msa1258710 | 0.832404 | 9.638840e-56 | -8.615850e-47 |
| Msa0804250 | Msa1258710 | 0.826109 | 3.248691e-54 | -8.615850e-47 |
| Msa0815630 | Msa1258710 | 0.811017 | 8.640368e-51 | -8.615850e-47 |
| Msa0817540 | Msa1258710 | 0.819054 | 1.420774e-52 | -8.615850e-47 |
| Msa0819540 | Msa1258710 | 0.836682 | 8.108908e-57 | -8.615850e-47 |
| Msa0828300 | Msa1258710 | 0.802083 | 6.639231e-49 | -8.615850e-47 |
| Msa0128860 | Msa1258710 | 0.815608 | 8.473260e-52 | -8.615850e-47 |
| Msa0134180 | Msa1258710 | 0.843237 | 1.585655e-58 | -8.615850e-47 |
| Msa0137610 | Msa1258710 | -0.842889 | 1.962724e-58 | -8.615850e-47 |
| Msa0138920 | Msa1258710 | 0.834487 | 2.913496e-56 | -8.615850e-47 |
| Msa0146280 | Msa1258710 | 0.823463 | 1.366231e-53 | -8.615850e-47 |
| Msa0167480 | Msa1258710 | 0.839828 | 1.254234e-57 | -8.615850e-47 |
| Msa0173530 | Msa1258710 | 0.812532 | 4.043398e-51 | -8.615850e-47 |
| Msa0173890 | Msa1258710 | 0.800124 | 1.670024e-48 | -8.615850e-47 |
| Msa0174730 | Msa1258710 | 0.814159 | 1.775279e-51 | -8.615850e-47 |
| Msa0180020 | Msa1258710 | 0.800268 | 1.560947e-48 | -8.615850e-47 |
| Msa0180930 | Msa1258710 | 0.814778 | 1.295319e-51 | -8.615850e-47 |
| Msa0181610 | Msa1258710 | 0.842428 | 2.602167e-58 | -8.615850e-47 |
| Msa0185400 | Msa1258710 | 0.813582 | 2.379684e-51 | -8.615850e-47 |
| Msa0187690 | Msa1258710 | 0.849361 | 3.396812e-60 | -8.615850e-47 |
| Msa0187930 | Msa1258710 | 0.843435 | 1.404051e-58 | -8.615850e-47 |
| Msa0188690 | Msa1258710 | 0.821731 | 3.454343e-53 | -8.615850e-47 |
| Msa0194540 | Msa1258710 | 0.847481 | 1.125380e-59 | -8.615850e-47 |
| Msa0196190 | Msa1258710 | 0.813094 | 3.045939e-51 | -8.615850e-47 |
| Msa0219120 | Msa1258710 | 0.807451 | 5.021480e-50 | -8.615850e-47 |
| Msa0221030 | Msa1258710 | 0.800665 | 1.295246e-48 | -8.615850e-47 |
| Msa0226460 | Msa1258710 | 0.805741 | 1.153158e-49 | -8.615850e-47 |
| Msa0230490 | Msa1258710 | 0.815818 | 7.607372e-52 | -8.615850e-47 |
| Msa0231100 | Msa1258710 | 0.800483 | 1.411183e-48 | -8.615850e-47 |
| Msa1227690 | Msa1258710 | 0.825268 | 5.143101e-54 | -8.615850e-47 |
| Msa1230580 | Msa1258710 | 0.815175 | 1.057656e-51 | -8.615850e-47 |
| Msa1232710 | Msa1258710 | 0.816727 | 4.763137e-52 | -8.615850e-47 |
| Msa1234680 | Msa1258710 | 0.802550 | 5.319701e-49 | -8.615850e-47 |
| Msa1235250 | Msa1258710 | 0.821270 | 4.413945e-53 | -8.615850e-47 |
| Msa1252190 | Msa1258710 | 0.848692 | 5.210911e-60 | -8.615850e-47 |
| Msa1258710 | Msa1266060 | 0.840168 | 1.022625e-57 | -8.615850e-47 |
| Msa1258710 | Msa1292830 | 0.849330 | 3.465517e-60 | -8.615850e-47 |
| Msa1258710 | Msa1307570 | 0.808407 | 3.143993e-50 | -8.615850e-47 |
| Msa1258710 | Msa1313300 | 0.824723 | 6.917051e-54 | -8.615850e-47 |
| Msa1258710 | Msa1333560 | 0.861674 | 8.687564e-64 | -8.615850e-47 |
| Msa1258710 | Msa1349570 | 0.826528 | 2.581352e-54 | -8.615850e-47 |
| Msa1258710 | Msa1360960 | 0.817561 | 3.093526e-52 | -8.615850e-47 |
| Msa1258710 | Msa1363330 | 0.863471 | 2.431575e-64 | -8.615850e-47 |
| Msa1258710 | Msa1369150 | 0.847653 | 1.009011e-59 | -8.615850e-47 |
| Msa1258710 | Msa1369190 | 0.804595 | 2.003294e-49 | -8.615850e-47 |
| Msa1258710 | Msa1373820 | 0.809521 | 1.816329e-50 | -8.615850e-47 |
| Msa1258710 | Msa1374060 | 0.822192 | 2.701981e-53 | -8.615850e-47 |
| Msa1258710 | Msa1374120 | 0.812632 | 3.845815e-51 | -8.615850e-47 |
| Msa1258710 | Msa1379760 | 0.821920 | 3.123524e-53 | -8.615850e-47 |
| Msa1258710 | Msa1380380 | 0.802095 | 6.599189e-49 | -8.615850e-47 |
| Msa1258710 | Msa1381120 | 0.801387 | 9.222403e-49 | -8.615850e-47 |
| Msa1258710 | Msa1386600 | 0.862321 | 5.505122e-64 | -8.615850e-47 |
| Msa1258710 | Msa1401390 | 0.856591 | 2.901159e-62 | -8.615850e-47 |
| Msa1258710 | Msa1406040 | 0.819258 | 1.276515e-52 | -8.615850e-47 |
| Msa1258710 | Msa1410440 | 0.845818 | 3.202575e-59 | -8.615850e-47 |
| Msa1258710 | Msa1411500 | 0.832774 | 7.801670e-56 | -8.615850e-47 |
| Msa1258710 | Msa1427560 | 0.841016 | 6.134945e-58 | -8.615850e-47 |
| Msa1258710 | Msa1432950 | 0.825946 | 3.551828e-54 | -8.615850e-47 |
| Msa1258710 | Msa1440260 | -0.820661 | 6.097365e-53 | -8.615850e-47 |
| Msa1258710 | Msa1442850 | 0.825268 | 5.142373e-54 | -8.615850e-47 |
| Msa1258710 | Msa1443300 | 0.827437 | 1.565699e-54 | -8.615850e-47 |
| Msa1258710 | Msa1443930 | 0.820891 | 5.396993e-53 | -8.615850e-47 |
| Msa1258710 | Msa1446810 | 0.802036 | 6.788121e-49 | -8.615850e-47 |
| Msa1258710 | Msa1448690 | 0.847575 | 1.060201e-59 | -8.615850e-47 |
| Msa1258710 | Msa1449930 | 0.808919 | 2.444727e-50 | -8.615850e-47 |
| Msa1258710 | Msa1459380 | 0.847068 | 1.460465e-59 | -8.615850e-47 |
| Msa1258710 | Msa1459460 | 0.809848 | 1.544583e-50 | -8.615850e-47 |
| Msa1258710 | Msa1462860 | 0.814838 | 1.256295e-51 | -8.615850e-47 |
| Msa0427780 | Msa1258710 | 0.810355 | 1.201486e-50 | -8.615850e-47 |
| Msa0434920 | Msa1258710 | 0.868616 | 5.720732e-66 | -8.615850e-47 |
| Msa0435370 | Msa1258710 | 0.879579 | 1.110191e-69 | -8.615850e-47 |
| Msa0435420 | Msa1258710 | 0.881582 | 2.129522e-70 | -8.615850e-47 |
| Msa0435570 | Msa1258710 | 0.862127 | 6.314071e-64 | -8.615850e-47 |
| Msa0443390 | Msa1258710 | 0.829796 | 4.213514e-55 | -8.615850e-47 |
| Msa0478870 | Msa1258710 | 0.841293 | 5.187862e-58 | -8.615850e-47 |
| Msa1005820 | Msa1258710 | 0.811198 | 7.892733e-51 | -8.615850e-47 |
| Msa1019240 | Msa1258710 | 0.847267 | 1.288652e-59 | -8.615850e-47 |
| Msa1019260 | Msa1258710 | 0.840036 | 1.107187e-57 | -8.615850e-47 |
| Msa1037640 | Msa1258710 | 0.815267 | 1.009222e-51 | -8.615850e-47 |
| Msa1043690 | Msa1258710 | 0.803795 | 2.939083e-49 | -8.615850e-47 |
| Msa1066490 | Msa1258710 | 0.802760 | 4.814316e-49 | -8.615850e-47 |
| Msa1076560 | Msa1258710 | 0.810902 | 9.147467e-51 | -8.615850e-47 |
| Msa1079230 | Msa1258710 | 0.806863 | 6.690022e-50 | -8.615850e-47 |
| Msa1104140 | Msa1258710 | 0.829996 | 3.765720e-55 | -8.615850e-47 |
| Msa1104210 | Msa1258710 | 0.844083 | 9.417138e-59 | -8.615850e-47 |
| Msa0244780 | Msa1258710 | 0.850810 | 1.334903e-60 | -8.615850e-47 |
| Msa0249540 | Msa1258710 | 0.805199 | 1.498054e-49 | -8.615850e-47 |
| Msa0255560 | Msa1258710 | 0.802141 | 6.459552e-49 | -8.615850e-47 |
| Msa0258850 | Msa1258710 | 0.810303 | 1.232708e-50 | -8.615850e-47 |
| Msa0262480 | Msa1258710 | 0.835598 | 1.528855e-56 | -8.615850e-47 |
| Msa0268130 | Msa1258710 | 0.842127 | 3.126861e-58 | -8.615850e-47 |
| Msa0292400 | Msa1258710 | 0.805048 | 1.610828e-49 | -8.615850e-47 |
| Msa0296250 | Msa1258710 | 0.813142 | 2.973306e-51 | -8.615850e-47 |
| Msa0298200 | Msa1258710 | 0.820928 | 5.293555e-53 | -8.615850e-47 |
| Msa0298990 | Msa1258710 | 0.845961 | 2.929993e-59 | -8.615850e-47 |
| Msa0300350 | Msa1258710 | 0.822278 | 2.580628e-53 | -8.615850e-47 |
| Msa0302380 | Msa1258710 | 0.841295 | 5.180776e-58 | -8.615850e-47 |
| Msa0307850 | Msa1258710 | 0.829881 | 4.015904e-55 | -8.615850e-47 |
| Msa0318700 | Msa1258710 | 0.810672 | 1.026042e-50 | -8.615850e-47 |
| Msa0327300 | Msa1258710 | 0.826906 | 2.097259e-54 | -8.615850e-47 |
| Msa0340290 | Msa1258710 | 0.804016 | 2.644915e-49 | -8.615850e-47 |
| Msa0341690 | Msa1258710 | 0.816649 | 4.959054e-52 | -8.615850e-47 |
| Msa0348830 | Msa1258710 | 0.816284 | 5.986459e-52 | -8.615850e-47 |
| Msa1117550 | Msa1258710 | 0.824160 | 9.379873e-54 | -8.615850e-47 |
| Msa1119070 | Msa1258710 | 0.818284 | 2.124432e-52 | -8.615850e-47 |
| Msa1119170 | Msa1258710 | 0.813013 | 3.172375e-51 | -8.615850e-47 |
| Msa1124110 | Msa1258710 | 0.815571 | 8.635640e-52 | -8.615850e-47 |
| Msa1126510 | Msa1258710 | 0.831648 | 1.481590e-55 | -8.615850e-47 |
| Msa1126770 | Msa1258710 | 0.803520 | 3.352685e-49 | -8.615850e-47 |
| Msa1127590 | Msa1258710 | 0.814006 | 1.919431e-51 | -8.615850e-47 |
| Msa1131560 | Msa1258710 | 0.801498 | 8.752626e-49 | -8.615850e-47 |
| Msa1143650 | Msa1258710 | 0.872605 | 2.798137e-67 | -8.615850e-47 |
| Msa1166860 | Msa1258710 | 0.828451 | 8.927806e-55 | -8.615850e-47 |
| Msa1166870 | Msa1258710 | 0.838035 | 3.652897e-57 | -8.615850e-47 |
| Msa1168950 | Msa1258710 | 0.821787 | 3.353304e-53 | -8.615850e-47 |
| Msa1169040 | Msa1258710 | 0.833977 | 3.910399e-56 | -8.615850e-47 |
| Msa1173330 | Msa1258710 | 0.826301 | 2.925225e-54 | -8.615850e-47 |
| Msa1174530 | Msa1258710 | 0.810979 | 8.803680e-51 | -8.615850e-47 |
| Msa1184370 | Msa1258710 | 0.802247 | 6.141920e-49 | -8.615850e-47 |
| Msa1186530 | Msa1258710 | 0.840552 | 8.116814e-58 | -8.615850e-47 |
| Msa1198530 | Msa1258710 | 0.804076 | 2.569189e-49 | -8.615850e-47 |
| Msa1200370 | Msa1258710 | 0.816541 | 5.245063e-52 | -8.615850e-47 |
| Msa1218140 | Msa1258710 | 0.830746 | 2.468138e-55 | -8.615850e-47 |
| Msa0526540 | Msa1258710 | 0.867928 | 9.529264e-66 | -8.615850e-47 |
| Msa0527020 | Msa1258710 | 0.800478 | 1.414522e-48 | -8.615850e-47 |
| Msa0527150 | Msa1258710 | 0.840835 | 6.842003e-58 | -8.615850e-47 |
| Msa0534750 | Msa1258710 | 0.826047 | 3.360315e-54 | -8.615850e-47 |
| Msa0571920 | Msa1258710 | 0.838832 | 2.274771e-57 | -8.615850e-47 |
| Msa0576940 | Msa1258710 | 0.876893 | 9.718577e-69 | -8.615850e-47 |
| Msa0581070 | Msa1258710 | 0.804700 | 1.904918e-49 | -8.615850e-47 |
| Msa0593700 | Msa1258710 | 0.800584 | 1.346005e-48 | -8.615850e-47 |
| Msa0856050 | Msa1258710 | 0.827764 | 1.306495e-54 | -8.615850e-47 |
| Msa0867060 | Msa1258710 | 0.841901 | 3.586071e-58 | -8.615850e-47 |
| Msa0872670 | Msa1258710 | 0.800429 | 1.447393e-48 | -8.615850e-47 |
| Msa0943170 | Msa1258710 | 0.801915 | 7.187838e-49 | -8.615850e-47 |
| Msa0963020 | Msa1258710 | 0.820813 | 5.625988e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1258710 | MtrunA17_Chr4g0057681 | 87.292 | 480 | 32 | 4 | 1 | 453 | 1 | 478 | 0.0 | 831 |
| Msa1258710 | MtrunA17_Chr5g0418151 | 82.988 | 482 | 51 | 6 | 1 | 453 | 1 | 480 | 0.0 | 791 |
| Msa1258710 | MtrunA17_Chr3g0116191 | 69.023 | 481 | 117 | 6 | 1 | 453 | 1 | 477 | 0.0 | 673 |
| Msa1258710 | MtrunA17_Chr3g0116211 | 89.474 | 38 | 4 | 0 | 214 | 251 | 5 | 42 | 2.14e-20 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1258710 | AT4G24830.1 | 75.587 | 426 | 74 | 5 | 53 | 451 | 70 | 492 | 0.0 | 648 |
| Msa1258710 | AT4G24830.2 | 66.432 | 426 | 69 | 6 | 53 | 451 | 70 | 448 | 0.0 | 548 |
Find 139 sgRNAs with CRISPR-Local
Find 359 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAATTAAATCAACGCTTAA+AGG | 0.127774 | 8_2:+59929434 | None:intergenic |
| CATTATTTCTTGCAGATATT+TGG | 0.140911 | 8_2:-59929995 | Msa1258710:intron |
| ACACCAACTCTGCATATTTA+AGG | 0.172014 | 8_2:+59929716 | None:intergenic |
| TCAAGTCCTTTACGACTAAT+TGG | 0.184464 | 8_2:+59932030 | None:intergenic |
| TCTTGCAGATATTTGGAAAT+TGG | 0.199883 | 8_2:-59929988 | Msa1258710:intron |
| GTCACTAAAGGGTGATATTT+TGG | 0.204335 | 8_2:-59930450 | Msa1258710:intron |
| GCGTATTTGATTGCCTTAAA+AGG | 0.228384 | 8_2:-59929408 | Msa1258710:three_prime_UTR |
| ACGTAGCCCGCTACCCTTCT+TGG | 0.260980 | 8_2:+59932828 | None:intergenic |
| CAGAGAATATTCTGTTTAAT+CGG | 0.269629 | 8_2:-59933582 | Msa1258710:CDS |
| CTGTAATGGTACACTGATTA+AGG | 0.270195 | 8_2:-59929205 | Msa1258710:three_prime_UTR |
| CATCATGTACATATCCTTCT+TGG | 0.285689 | 8_2:+59930409 | None:intergenic |
| TAATTGCGTGCGTGCGGCTT+TGG | 0.303374 | 8_2:+59933870 | None:intergenic |
| CTTAATCAGTGTACCATTAC+AGG | 0.310219 | 8_2:+59929206 | None:intergenic |
| ACTCCCGTGCTGCTTTAAAA+AGG | 0.317154 | 8_2:+59929791 | None:intergenic |
| AAAGCCGCACGCACGCAATT+AGG | 0.326522 | 8_2:-59933868 | Msa1258710:five_prime_UTR |
| TCTTGCCTATACAGGCTAAA+AGG | 0.329004 | 8_2:+59929562 | None:intergenic |
| CAAGTACTTCCTCTCATAAA+TGG | 0.334381 | 8_2:+59931959 | None:intergenic |
| AAAGCACAACGTTCCCGTTC+CGG | 0.350464 | 8_2:-59931344 | Msa1258710:CDS |
| GACTAATTGGGAGGCTCCAC+TGG | 0.351872 | 8_2:+59932043 | None:intergenic |
| TTGGAAATTGGTATTGAGTC+TGG | 0.354536 | 8_2:-59929976 | Msa1258710:CDS |
| TAACCCATGTTCATTCAAAA+AGG | 0.356247 | 8_2:-59933548 | Msa1258710:intron |
| CGTATAGGGTATAAAAGAAT+TGG | 0.371351 | 8_2:-59932090 | Msa1258710:intron |
| CCCGCTACCCTTCTTGGCTT+CGG | 0.371984 | 8_2:+59932834 | None:intergenic |
| AGCATTGCCCGGACCTTCAT+TGG | 0.372630 | 8_2:+59929466 | None:intergenic |
| TCCTTCTTGGGTTCATTAGC+CGG | 0.373034 | 8_2:+59930422 | None:intergenic |
| TGGAGGGAGTGGGATATTAC+AGG | 0.373658 | 8_2:-59931394 | Msa1258710:CDS |
| ATATTCTGTTTAATCGGGTT+TGG | 0.378824 | 8_2:-59933576 | Msa1258710:CDS |
| TATAAAAGAATTGGACGGTT+TGG | 0.385364 | 8_2:-59932081 | Msa1258710:CDS |
| GGTCCGGGCAATGCTTGAAC+AGG | 0.385668 | 8_2:-59929458 | Msa1258710:CDS |
| TGGTGCTGCAGAGAGAATTA+TGG | 0.387537 | 8_2:-59932310 | Msa1258710:intron |
| GCTACGTGGAAAATTGAATA+AGG | 0.387753 | 8_2:-59932812 | Msa1258710:CDS |
| GGAGCCACAATGTTTAGCTT+GGG | 0.388294 | 8_2:+59931418 | None:intergenic |
| GTTCCTATCCCTGCTATAGA+TGG | 0.391675 | 8_2:+59931309 | None:intergenic |
| CGCAGTAATCTTCTGCATAA+AGG | 0.397397 | 8_2:+59929651 | None:intergenic |
| AAGATTACTGCGACCACAAC+AGG | 0.398632 | 8_2:-59929640 | Msa1258710:CDS |
| CAAGTCCTTTACGACTAATT+GGG | 0.405173 | 8_2:+59932031 | None:intergenic |
| ATGAGATATCTTGCCTATAC+AGG | 0.405421 | 8_2:+59929554 | None:intergenic |
| CACCAACTCTGCATATTTAA+GGG | 0.411511 | 8_2:+59929717 | None:intergenic |
| GTCGGTGCTGGTAGACTTCA+AGG | 0.424838 | 8_2:-59933419 | Msa1258710:intron |
| ATAGGTGGAAAGCACGGAAT+TGG | 0.430346 | 8_2:-59929889 | Msa1258710:CDS |
| ACGGTCTTCCAATGAAGGTC+CGG | 0.434028 | 8_2:-59929474 | Msa1258710:CDS |
| CGTCTTGCCATTGAGTGAAA+AGG | 0.438127 | 8_2:+59929948 | None:intergenic |
| TTCCTTTCCCTGTACACCCA+TGG | 0.439674 | 8_2:+59931578 | None:intergenic |
| ACTCCTTCCCTTCATGCAAC+AGG | 0.446702 | 8_2:-59933771 | Msa1258710:intron |
| AGAGAATATTCTGTTTAATC+GGG | 0.449216 | 8_2:-59933581 | Msa1258710:CDS |
| GTATTTCCTTGCTTGCGTGC+TGG | 0.449287 | 8_2:-59931984 | Msa1258710:CDS |
| AGTTGGTGTATGCTGGTAGA+TGG | 0.450417 | 8_2:-59929702 | Msa1258710:CDS |
| AGCTCAGCGAGTAAAGTTGC+TGG | 0.451716 | 8_2:+59929919 | None:intergenic |
| GCTGTCTCCCATGGGTGTAC+AGG | 0.452794 | 8_2:-59931586 | Msa1258710:CDS |
| TGGAGCCACAATGTTTAGCT+TGG | 0.467832 | 8_2:+59931417 | None:intergenic |
| GGAGCTGATGCTGTCTCCCA+TGG | 0.468989 | 8_2:-59931595 | Msa1258710:CDS |
| ATGGTTGAGAATAGGCTTGT+AGG | 0.469420 | 8_2:-59929856 | Msa1258710:CDS |
| AAAGGTTCTGTTACTGTAGC+AGG | 0.471477 | 8_2:-59929595 | Msa1258710:CDS |
| ATCATGTACATATCCTTCTT+GGG | 0.473196 | 8_2:+59930410 | None:intergenic |
| CTCGCTGAGCTCAATGAGAT+AGG | 0.474365 | 8_2:-59929907 | Msa1258710:CDS |
| GTTCTTGTTCACTTCACCAA+TGG | 0.484175 | 8_2:-59933835 | Msa1258710:exon |
| GCTTTACGGTCTTCCAATGA+AGG | 0.484315 | 8_2:-59929479 | Msa1258710:CDS |
| GCAAGATATCTCATCATTTG+AGG | 0.485368 | 8_2:-59929545 | Msa1258710:CDS |
| TTGTGGCTCCATGGAGGGAG+TGG | 0.488472 | 8_2:-59931405 | Msa1258710:CDS |
| TACAGGGAAAGGAAATGATC+AGG | 0.502638 | 8_2:-59931569 | Msa1258710:CDS |
| GTGTGCTTCACTGCTGATGT+TGG | 0.505167 | 8_2:-59932277 | Msa1258710:CDS |
| CGGTCTTCCAATGAAGGTCC+GGG | 0.505856 | 8_2:-59929473 | Msa1258710:CDS |
| TCCTTTCCCTGTACACCCAT+GGG | 0.506646 | 8_2:+59931579 | None:intergenic |
| GGCAGTATCACGCAGTCATA+CGG | 0.506933 | 8_2:-59932869 | Msa1258710:CDS |
| CCTTCTTGGGTTCATTAGCC+GGG | 0.507887 | 8_2:+59930423 | None:intergenic |
| ATTAGTCGTAAAGGACTTGA+AGG | 0.509453 | 8_2:-59932027 | Msa1258710:CDS |
| GTTGTACTTGCTTACAGTGG+TGG | 0.512883 | 8_2:-59932790 | Msa1258710:CDS |
| TTCATGACATGCAGTTGTAA+AGG | 0.514606 | 8_2:-59932890 | Msa1258710:intron |
| TATTCTCAACCATGTCGATC+CGG | 0.516319 | 8_2:+59929866 | None:intergenic |
| AGCTAAACATTGTGGCTCCA+TGG | 0.517704 | 8_2:-59931414 | Msa1258710:CDS |
| TCTGTTTAATCGGGTTTGGA+AGG | 0.518126 | 8_2:-59933572 | Msa1258710:CDS |
| GGATCGACATGGTTGAGAAT+AGG | 0.521327 | 8_2:-59929864 | Msa1258710:CDS |
| AATGCTTTCAACTGAGCCAT+TGG | 0.522346 | 8_2:+59933819 | None:intergenic |
| CAGTCATTGTCCCATGGTTG+AGG | 0.522691 | 8_2:-59932756 | Msa1258710:intron |
| GAGCTGATGCTGTCTCCCAT+GGG | 0.524079 | 8_2:-59931594 | Msa1258710:CDS |
| CAAGATATCTCATCATTTGA+GGG | 0.524808 | 8_2:-59929544 | Msa1258710:CDS |
| AGGAGAACCTGTTGCATGAA+GGG | 0.528602 | 8_2:+59933764 | None:intergenic |
| CCAAGAGCTAGTGTCGGTGC+TGG | 0.529991 | 8_2:-59933431 | Msa1258710:CDS |
| GTAATATCCCACTCCCTCCA+TGG | 0.530801 | 8_2:+59931397 | None:intergenic |
| TGATCCACTTCGTGAGTCGA+TGG | 0.531316 | 8_2:-59929677 | Msa1258710:CDS |
| CGCGGAGTTTATGAAACTCC+TGG | 0.532888 | 8_2:-59929823 | Msa1258710:CDS |
| GGCCCTGTTCAAGCATTGCC+CGG | 0.533555 | 8_2:+59929455 | None:intergenic |
| GTGGATGTTGCTAAAGAAGT+TGG | 0.533691 | 8_2:-59931616 | Msa1258710:CDS |
| AGCCCTTAAATATGCAGAGT+TGG | 0.534651 | 8_2:-59929719 | Msa1258710:CDS |
| CTGTCTCCCATGGGTGTACA+GGG | 0.536193 | 8_2:-59931585 | Msa1258710:CDS |
| TCCCATGGGTGTACAGGGAA+AGG | 0.539361 | 8_2:-59931580 | Msa1258710:CDS |
| AGCCTCCCAATTAGTCGTAA+AGG | 0.540721 | 8_2:-59932036 | Msa1258710:CDS |
| GTCTTGCCATTGAGTGAAAA+GGG | 0.543713 | 8_2:+59929949 | None:intergenic |
| AATCCATCTATAGCAGGGAT+AGG | 0.548987 | 8_2:-59931312 | Msa1258710:CDS |
| GTGGAAAGCACGGAATTGGC+CGG | 0.550439 | 8_2:-59929885 | Msa1258710:CDS |
| TGTTAACTGAGTACCTGTAA+TGG | 0.551049 | 8_2:-59929219 | Msa1258710:three_prime_UTR |
| TATGATCAAGCTGATGCTGC+TGG | 0.551145 | 8_2:-59929511 | Msa1258710:CDS |
| CCAGCACCGACACTAGCTCT+TGG | 0.552890 | 8_2:+59933431 | None:intergenic |
| AAGGAGAACCTGTTGCATGA+AGG | 0.558077 | 8_2:+59933763 | None:intergenic |
| GAGCCACAATGTTTAGCTTG+GGG | 0.558250 | 8_2:+59931419 | None:intergenic |
| ATAGCAGGGATAGGAACCTA+TGG | 0.560895 | 8_2:-59931303 | Msa1258710:CDS |
| CCCGGCTAATGAACCCAAGA+AGG | 0.563898 | 8_2:-59930423 | Msa1258710:CDS |
| TCCGAAGCCAAGAAGGGTAG+CGG | 0.564921 | 8_2:-59932835 | Msa1258710:CDS |
| CCGAAGCCAAGAAGGGTAGC+GGG | 0.565040 | 8_2:-59932834 | Msa1258710:CDS |
| TCATTGGAAGACCGTAAAGC+CGG | 0.568825 | 8_2:+59929482 | None:intergenic |
| GTAGTAGCGCATAGATGTGA+AGG | 0.570777 | 8_2:+59933795 | None:intergenic |
| CAAAGTAACAGAACCTGTTG+TGG | 0.572279 | 8_2:+59929627 | None:intergenic |
| TGAAGATTCCGAAGCCAAGA+AGG | 0.576232 | 8_2:-59932842 | Msa1258710:CDS |
| TATGCAGAGTTGGTGTATGC+TGG | 0.582525 | 8_2:-59929709 | Msa1258710:CDS |
| CAACATATATACCTCAACCA+TGG | 0.584663 | 8_2:+59932745 | None:intergenic |
| GAACCTGTTGCATGAAGGGA+AGG | 0.585609 | 8_2:+59933768 | None:intergenic |
| GCGTCCATCGACTCACGAAG+TGG | 0.588223 | 8_2:+59929673 | None:intergenic |
| AACATATATACCTCAACCAT+GGG | 0.591621 | 8_2:+59932746 | None:intergenic |
| CGGAATTGGCCGGATCGACA+TGG | 0.592013 | 8_2:-59929875 | Msa1258710:CDS |
| AAACATTGTGGCTCCATGGA+GGG | 0.593118 | 8_2:-59931410 | Msa1258710:CDS |
| ACTTGATCGAGAAACAATAC+AGG | 0.598769 | 8_2:-59929755 | Msa1258710:CDS |
| CCTCATGGCTAAGATGCCAT+AGG | 0.600016 | 8_2:+59931287 | None:intergenic |
| ATGGCACCAGCACGCAAGCA+AGG | 0.605414 | 8_2:+59931978 | None:intergenic |
| GAAGATTCCGAAGCCAAGAA+GGG | 0.607784 | 8_2:-59932841 | Msa1258710:CDS |
| TGTGGCTCCATGGAGGGAGT+GGG | 0.609883 | 8_2:-59931404 | Msa1258710:CDS |
| ACACATCAGTCATTGTCCCA+TGG | 0.619335 | 8_2:-59932762 | Msa1258710:CDS |
| GTCCTTTACGACTAATTGGG+AGG | 0.620171 | 8_2:+59932034 | None:intergenic |
| GTTACTTTGAAATTGTACAA+AGG | 0.620393 | 8_2:-59929613 | Msa1258710:CDS |
| TGCTGACTGGTAGGCCATGG+TGG | 0.621627 | 8_2:-59931635 | Msa1258710:intron |
| ACAACCTAATTGCGTGCGTG+CGG | 0.637398 | 8_2:+59933864 | None:intergenic |
| GTCCGGGCAATGCTTGAACA+GGG | 0.642826 | 8_2:-59929457 | Msa1258710:CDS |
| TAGGGTATAAAAGAATTGGA+CGG | 0.644179 | 8_2:-59932086 | Msa1258710:CDS |
| GCTGAGCTCAATGAGATAGG+TGG | 0.646043 | 8_2:-59929904 | Msa1258710:CDS |
| AATGAGATAGGTGGAAAGCA+CGG | 0.647318 | 8_2:-59929895 | Msa1258710:CDS |
| TTCTTTAGCAACATCCACCA+TGG | 0.653712 | 8_2:+59931621 | None:intergenic |
| GAGTTTATGAAACTCCTGGT+GGG | 0.653894 | 8_2:-59929819 | Msa1258710:CDS |
| AGTCGTAAAGGACTTGAAGG+AGG | 0.661011 | 8_2:-59932024 | Msa1258710:CDS |
| CTTGTAGGCATGAAGAGTCG+CGG | 0.661692 | 8_2:-59929841 | Msa1258710:CDS |
| GAAGCCAAAGCAAAAGCCAG+TGG | 0.662975 | 8_2:-59932059 | Msa1258710:CDS |
| GAACCCCAAGCTAAACATTG+TGG | 0.664560 | 8_2:-59931422 | Msa1258710:CDS |
| AAGAAGGGTAGCGGGCTACG+TGG | 0.672202 | 8_2:-59932826 | Msa1258710:CDS |
| TAAACATTGTGGCTCCATGG+AGG | 0.674929 | 8_2:-59931411 | Msa1258710:CDS |
| AAGGTTGTACTTGCTTACAG+TGG | 0.676821 | 8_2:-59932793 | Msa1258710:CDS |
| GTATCACGCAGTCATACGGA+TGG | 0.685063 | 8_2:-59932865 | Msa1258710:CDS |
| GGAGTTTATGAAACTCCTGG+TGG | 0.687101 | 8_2:-59929820 | Msa1258710:CDS |
| GGAGGGAGTGGGATATTACA+GGG | 0.688013 | 8_2:-59931393 | Msa1258710:CDS |
| TTGAAACCAAGAGCTAGTGT+CGG | 0.691852 | 8_2:-59933437 | Msa1258710:CDS |
| GTGCTGGTGCCATTTATGAG+AGG | 0.694541 | 8_2:-59931968 | Msa1258710:CDS |
| CCTATGGCATCTTAGCCATG+AGG | 0.721010 | 8_2:-59931287 | Msa1258710:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATCTTATTTAATGATTT+TGG | - | chr8_2:59930716-59930735 | Msa1258710:intron | 10.0% |
| !!! | AAACATTTTTTTTTTTTTGA+GGG | + | chr8_2:59933706-59933725 | None:intergenic | 10.0% |
| !!! | AAAACATTTTTTTTTTTTTG+AGG | + | chr8_2:59933707-59933726 | None:intergenic | 10.0% |
| !! | ATGTAATGAAAATCAATAAA+GGG | + | chr8_2:59929393-59929412 | None:intergenic | 15.0% |
| !! | AATGTAATGAAAATCAATAA+AGG | + | chr8_2:59929394-59929413 | None:intergenic | 15.0% |
| !!! | ATGTTTTAACTTAAAGAATA+TGG | + | chr8_2:59929862-59929881 | None:intergenic | 15.0% |
| !! | CAACATATAAAGAATAAAAT+TGG | + | chr8_2:59929983-59930002 | None:intergenic | 15.0% |
| !!! | CAATTTTATTCTTTATATGT+TGG | - | chr8_2:59929981-59930000 | Msa1258710:CDS | 15.0% |
| !! | TAGAAAAATAAAAAAGAACA+AGG | + | chr8_2:59930327-59930346 | None:intergenic | 15.0% |
| !! | ATTAAAGGACAAAATTAATA+AGG | + | chr8_2:59932087-59932106 | None:intergenic | 15.0% |
| !!! | TTATTTAAGTTTTGTTGTTT+AGG | - | chr8_2:59933732-59933751 | Msa1258710:intron | 15.0% |
| !! | TTAATGACATTCAAAAAATG+GGG | + | chr8_2:59929357-59929376 | None:intergenic | 20.0% |
| !! | GTTAATGACATTCAAAAAAT+GGG | + | chr8_2:59929358-59929377 | None:intergenic | 20.0% |
| !! | TGTTAATGACATTCAAAAAA+TGG | + | chr8_2:59929359-59929378 | None:intergenic | 20.0% |
| !! | ATCTAATCAATATAATCAAC+TGG | + | chr8_2:59930092-59930111 | None:intergenic | 20.0% |
| !! | TCTTTATTCAGAATATACAA+AGG | + | chr8_2:59930381-59930400 | None:intergenic | 20.0% |
| !!! | TGAGCATTCTTTAAAAAAAA+GGG | + | chr8_2:59930593-59930612 | None:intergenic | 20.0% |
| !! | AGAACAAATTATACAACAAT+AGG | + | chr8_2:59930690-59930709 | None:intergenic | 20.0% |
| !! | GTTATAAGATTGTAAATATC+CGG | - | chr8_2:59930868-59930887 | Msa1258710:intron | 20.0% |
| !! | TCCATTCTTCAAATAATAAT+CGG | - | chr8_2:59931271-59931290 | Msa1258710:intron | 20.0% |
| !! | TTACAATTACTATGAAGAAA+TGG | + | chr8_2:59931329-59931348 | None:intergenic | 20.0% |
| !!! | TGATTTGTTTGTTTTTTCAT+TGG | - | chr8_2:59931844-59931863 | Msa1258710:intron | 20.0% |
| !!! | GATTTGTTTGTTTTTTCATT+GGG | - | chr8_2:59931845-59931864 | Msa1258710:intron | 20.0% |
| !!! | TTTTATAGACCATTCTTTAA+AGG | + | chr8_2:59931927-59931946 | None:intergenic | 20.0% |
| !! | TTCCAACAAAAGATAATTAA+AGG | + | chr8_2:59932102-59932121 | None:intergenic | 20.0% |
| !!! | TTTAATTATCTTTTGTTGGA+AGG | - | chr8_2:59932101-59932120 | Msa1258710:intron | 20.0% |
| !!! | TCTTTGAAGGAAAAAAATTA+TGG | - | chr8_2:59932310-59932329 | Msa1258710:intron | 20.0% |
| !!! | TTTCTGTTATGCTTTTAAAA+AGG | - | chr8_2:59932978-59932997 | Msa1258710:intron | 20.0% |
| !!! | TTCTGTTATGCTTTTAAAAA+GGG | - | chr8_2:59932979-59932998 | Msa1258710:intron | 20.0% |
| !!! | TCATTCTTTTATTAAAGTTG+AGG | + | chr8_2:59933803-59933822 | None:intergenic | 20.0% |
| ! | CAGAGAATATTCTGTTTAAT+CGG | - | chr8_2:59929464-59929483 | Msa1258710:CDS | 25.0% |
| ! | AGAGAATATTCTGTTTAATC+GGG | - | chr8_2:59929465-59929484 | Msa1258710:CDS | 25.0% |
| ! | CAACTACACAGATTAAAAAA+GGG | + | chr8_2:59929592-59929611 | None:intergenic | 25.0% |
| ! | TCAACTACACAGATTAAAAA+AGG | + | chr8_2:59929593-59929612 | None:intergenic | 25.0% |
| ! | ATTGCATGATTTATAAACCA+TGG | - | chr8_2:59929692-59929711 | Msa1258710:CDS | 25.0% |
| ! | AAGAATATGGTTTCAAATTG+CGG | + | chr8_2:59929849-59929868 | None:intergenic | 25.0% |
| ! | CATAATTATTCAATAGCATG+TGG | - | chr8_2:59929879-59929898 | Msa1258710:CDS | 25.0% |
| ! | ATTCAACTACAAAGAACAAT+AGG | + | chr8_2:59929910-59929929 | None:intergenic | 25.0% |
| !! | TTAAGATTTAAGACCTTATC+AGG | - | chr8_2:59929937-59929956 | Msa1258710:CDS | 25.0% |
| ! | CTTTATATGTTGGAAATGAA+TGG | - | chr8_2:59929991-59930010 | Msa1258710:intron | 25.0% |
| ! | CATTAGACTTAACTATCAAA+CGG | + | chr8_2:59930116-59930135 | None:intergenic | 25.0% |
| !! | CTGAGCATTCTTTAAAAAAA+AGG | + | chr8_2:59930594-59930613 | None:intergenic | 25.0% |
| ! | AACAATAGGTAACTTCAAAA+TGG | + | chr8_2:59930676-59930695 | None:intergenic | 25.0% |
| ! | TAACAAAATCAATGTCGTAT+AGG | - | chr8_2:59930941-59930960 | Msa1258710:intron | 25.0% |
| ! | AACAAAATCAATGTCGTATA+GGG | - | chr8_2:59930942-59930961 | Msa1258710:intron | 25.0% |
| ! | ACCGATTATTATTTGAAGAA+TGG | + | chr8_2:59931275-59931294 | None:intergenic | 25.0% |
| ! | AAAAAAATCCATCTATAGCA+GGG | - | chr8_2:59931729-59931748 | Msa1258710:intron | 25.0% |
| ! | TCTAATAGATCTATAGATTC+TGG | - | chr8_2:59931986-59932005 | Msa1258710:CDS | 25.0% |
| ! | CTAATAGATCTATAGATTCT+GGG | - | chr8_2:59931987-59932006 | Msa1258710:CDS | 25.0% |
| !! | GTCCTTTAATTATCTTTTGT+TGG | - | chr8_2:59932097-59932116 | Msa1258710:intron | 25.0% |
| ! | AACAGATAGACAAAATGATA+TGG | - | chr8_2:59932230-59932249 | Msa1258710:intron | 25.0% |
| ! | ACAGATAGACAAAATGATAT+GGG | - | chr8_2:59932231-59932250 | Msa1258710:intron | 25.0% |
| ! | AGATCATATGAATCTTCAAA+GGG | - | chr8_2:59932421-59932440 | Msa1258710:intron | 25.0% |
| !! | TGTCTGAAATTGTTTATCTT+TGG | - | chr8_2:59932534-59932553 | Msa1258710:intron | 25.0% |
| !! | GTCTGAAATTGTTTATCTTT+GGG | - | chr8_2:59932535-59932554 | Msa1258710:intron | 25.0% |
| ! | CTATTAACTAATGATCTGTT+TGG | - | chr8_2:59932716-59932735 | Msa1258710:intron | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | - | chr8_2:59932930-59932949 | Msa1258710:intron | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+GGG | - | chr8_2:59932931-59932950 | Msa1258710:intron | 25.0% |
| ! | TTGAAGCTGTATATATAGTT+GGG | + | chr8_2:59932957-59932976 | None:intergenic | 25.0% |
| !! | CATTATTTCTTGCAGATATT+TGG | - | chr8_2:59933051-59933070 | Msa1258710:intron | 25.0% |
| !!! | GTTACTTTGAAATTGTACAA+AGG | - | chr8_2:59933433-59933452 | Msa1258710:CDS | 25.0% |
| ! | GAAATTAAATCAACGCTTAA+AGG | + | chr8_2:59933615-59933634 | None:intergenic | 25.0% |
| !!! | AAGTTTTGTTGTTTAGGAAT+TGG | - | chr8_2:59933738-59933757 | Msa1258710:intron | 25.0% |
| !!! | TAGTAGTTTTGAATTGTTAG+CGG | - | chr8_2:59933773-59933792 | Msa1258710:CDS | 25.0% |
| ATATTCTGTTTAATCGGGTT+TGG | - | chr8_2:59929470-59929489 | Msa1258710:CDS | 30.0% | |
| TAACCCATGTTCATTCAAAA+AGG | - | chr8_2:59929498-59929517 | Msa1258710:CDS | 30.0% | |
| ! | TCACCTTTTTGAATGAACAT+GGG | + | chr8_2:59929504-59929523 | None:intergenic | 30.0% |
| ! | ATCACCTTTTTGAATGAACA+TGG | + | chr8_2:59929505-59929524 | None:intergenic | 30.0% |
| ! | AATCCACATACAGTTTTCAA+TGG | + | chr8_2:59929675-59929694 | None:intergenic | 30.0% |
| ATACAAAGGTTCACAAAGAA+CGG | + | chr8_2:59929749-59929768 | None:intergenic | 30.0% | |
| ! | CCTCAACATCTTTTATATTG+CGG | - | chr8_2:59929816-59929835 | Msa1258710:CDS | 30.0% |
| TTGAAAGTGGATAAATTCAG+TGG | - | chr8_2:59930050-59930069 | Msa1258710:intron | 30.0% | |
| AACATATATACCTCAACCAT+GGG | + | chr8_2:59930303-59930322 | None:intergenic | 30.0% | |
| ATTCAGAATATACAAAGGAG+AGG | + | chr8_2:59930376-59930395 | None:intergenic | 30.0% | |
| AAAGAATGCTCAGTAATTTG+AGG | - | chr8_2:59930396-59930415 | Msa1258710:intron | 30.0% | |
| AAGAATGCTCAGTAATTTGA+GGG | - | chr8_2:59930397-59930416 | Msa1258710:intron | 30.0% | |
| TTGAAAAGTAACGACATACT+TGG | + | chr8_2:59930795-59930814 | None:intergenic | 30.0% | |
| CATGATTATGCTGTCTAAAT+TGG | - | chr8_2:59930831-59930850 | Msa1258710:intron | 30.0% | |
| ATGCTGTCTAAATTGGTTAT+TGG | - | chr8_2:59930838-59930857 | Msa1258710:intron | 30.0% | |
| TCTAAATTGGTTATTGGAAG+AGG | - | chr8_2:59930844-59930863 | Msa1258710:intron | 30.0% | |
| !!! | TACGACATTGATTTTGTTAC+CGG | + | chr8_2:59930940-59930959 | None:intergenic | 30.0% |
| CGTATAGGGTATAAAAGAAT+TGG | - | chr8_2:59930956-59930975 | Msa1258710:intron | 30.0% | |
| TAGGGTATAAAAGAATTGGA+CGG | - | chr8_2:59930960-59930979 | Msa1258710:intron | 30.0% | |
| TATAAAAGAATTGGACGGTT+TGG | - | chr8_2:59930965-59930984 | Msa1258710:intron | 30.0% | |
| ATTACTATGAAGAAATGGCA+CGG | + | chr8_2:59931324-59931343 | None:intergenic | 30.0% | |
| ATTGTAATTGACGATGATAG+TGG | - | chr8_2:59931342-59931361 | Msa1258710:CDS | 30.0% | |
| !!! | TAGATGGATTTTTTTGTCAC+CGG | + | chr8_2:59931724-59931743 | None:intergenic | 30.0% |
| CAAAAAAATCCATCTATAGC+AGG | - | chr8_2:59931728-59931747 | Msa1258710:intron | 30.0% | |
| ! | CTAGTTGTAGTGTTGAATAT+TGG | - | chr8_2:59931811-59931830 | Msa1258710:intron | 30.0% |
| CTTGTCTGCTATTGAATTTA+AGG | - | chr8_2:59931869-59931888 | Msa1258710:intron | 30.0% | |
| TCCTTTCAAAGTAATAGAGT+TGG | - | chr8_2:59931900-59931919 | Msa1258710:intron | 30.0% | |
| ACCAACTCTATTACTTTGAA+AGG | + | chr8_2:59931904-59931923 | None:intergenic | 30.0% | |
| CTAAAGTAAAGACATTTGTG+TGG | + | chr8_2:59932037-59932056 | None:intergenic | 30.0% | |
| ! | TAAGGAACTAAATTGATGAC+TGG | + | chr8_2:59932069-59932088 | None:intergenic | 30.0% |
| GTATATTAGCATCCTTTAGA+CGG | + | chr8_2:59932127-59932146 | None:intergenic | 30.0% | |
| CCATCTAACAAACATTAATG+TGG | + | chr8_2:59932194-59932213 | None:intergenic | 30.0% | |
| ! | CCACATTAATGTTTGTTAGA+TGG | - | chr8_2:59932191-59932210 | Msa1258710:intron | 30.0% |
| ATCTGTTACAGAATGAATGA+AGG | + | chr8_2:59932217-59932236 | None:intergenic | 30.0% | |
| CAGATAGACAAAATGATATG+GGG | - | chr8_2:59932232-59932251 | Msa1258710:intron | 30.0% | |
| ! | GAAATCCTATCATTTGTTAC+CGG | - | chr8_2:59932391-59932410 | Msa1258710:intron | 30.0% |
| GAGATCATATGAATCTTCAA+AGG | - | chr8_2:59932420-59932439 | Msa1258710:intron | 30.0% | |
| !! | GCTTATCTTTAGTTTGATCT+AGG | - | chr8_2:59932483-59932502 | Msa1258710:intron | 30.0% |
| ATCATGTACATATCCTTCTT+GGG | + | chr8_2:59932639-59932658 | None:intergenic | 30.0% | |
| TAGTTAATAGAACCATGAGA+AGG | + | chr8_2:59932706-59932725 | None:intergenic | 30.0% | |
| AACTAATGATCTGTTTGGAT+TGG | - | chr8_2:59932721-59932740 | Msa1258710:intron | 30.0% | |
| ! | GCTTGTTTGAGTTTATTTAC+TGG | - | chr8_2:59932743-59932762 | Msa1258710:intron | 30.0% |
| !! | AGTAAGCTAAAAGCATCTTA+TGG | + | chr8_2:59932824-59932843 | None:intergenic | 30.0% |
| CTTGAAGCTGTATATATAGT+TGG | + | chr8_2:59932958-59932977 | None:intergenic | 30.0% | |
| GTGTGCTTTCAAAAAATGTA+AGG | + | chr8_2:59933032-59933051 | None:intergenic | 30.0% | |
| TCTTGCAGATATTTGGAAAT+TGG | - | chr8_2:59933058-59933077 | Msa1258710:intron | 30.0% | |
| CAAGATATCTCATCATTTGA+GGG | - | chr8_2:59933502-59933521 | Msa1258710:intron | 30.0% | |
| ! | AAACAAAGCATGTCCTTTTA+AGG | + | chr8_2:59933654-59933673 | None:intergenic | 30.0% |
| AGAGAGTGAAATGAAAACGA+AGG | + | chr8_2:59929305-59929324 | None:intergenic | 35.0% | |
| GATCCATTGAAAACTGTATG+TGG | - | chr8_2:59929669-59929688 | Msa1258710:CDS | 35.0% | |
| TATAAACCATGGTGAATCTG+TGG | - | chr8_2:59929703-59929722 | Msa1258710:CDS | 35.0% | |
| TTAAAACCACAGATTCACCA+TGG | + | chr8_2:59929712-59929731 | None:intergenic | 35.0% | |
| !!! | GAATCTGTGGTTTTAAACTG+CGG | - | chr8_2:59929716-59929735 | Msa1258710:CDS | 35.0% |
| CTTTGTATTGCAGCGATATT+CGG | - | chr8_2:59929761-59929780 | Msa1258710:CDS | 35.0% | |
| CCGCAATATAAAAGATGTTG+AGG | + | chr8_2:59929819-59929838 | None:intergenic | 35.0% | |
| ! | CATCTTTTATATTGCGGTTG+CGG | - | chr8_2:59929822-59929841 | Msa1258710:CDS | 35.0% |
| CATCACGTTAATACCTGATA+AGG | + | chr8_2:59929953-59929972 | None:intergenic | 35.0% | |
| AAAGTGGATAAATTCAGTGG+AGG | - | chr8_2:59930053-59930072 | Msa1258710:intron | 35.0% | |
| TTCATGACATGCAGTTGTAA+AGG | - | chr8_2:59930156-59930175 | Msa1258710:intron | 35.0% | |
| GCTACGTGGAAAATTGAATA+AGG | - | chr8_2:59930234-59930253 | Msa1258710:intron | 35.0% | |
| CAACATATATACCTCAACCA+TGG | + | chr8_2:59930304-59930323 | None:intergenic | 35.0% | |
| AGAATGCTCAGTAATTTGAG+GGG | - | chr8_2:59930398-59930417 | Msa1258710:intron | 35.0% | |
| !!! | TTACCCTGTTTTTACACAAG+AGG | + | chr8_2:59930494-59930513 | None:intergenic | 35.0% |
| TCTTGTGTAAAAACAGGGTA+AGG | - | chr8_2:59930493-59930512 | Msa1258710:intron | 35.0% | |
| ! | CTTTAAAAAAAAGGGCAACC+CGG | + | chr8_2:59930585-59930604 | None:intergenic | 35.0% |
| AGAGATGTAGTTTAATCGAG+TGG | - | chr8_2:59930627-59930646 | Msa1258710:intron | 35.0% | |
| TGTAGTTTAATCGAGTGGAA+TGG | - | chr8_2:59930632-59930651 | Msa1258710:intron | 35.0% | |
| GTAGTTTAATCGAGTGGAAT+GGG | - | chr8_2:59930633-59930652 | Msa1258710:intron | 35.0% | |
| CTGAGTAAAACAAATTCTCC+TGG | + | chr8_2:59930894-59930913 | None:intergenic | 35.0% | |
| CAAGTCCTTTACGACTAATT+GGG | + | chr8_2:59931018-59931037 | None:intergenic | 35.0% | |
| TCAAGTCCTTTACGACTAAT+TGG | + | chr8_2:59931019-59931038 | None:intergenic | 35.0% | |
| ATTAGTCGTAAAGGACTTGA+AGG | - | chr8_2:59931019-59931038 | Msa1258710:intron | 35.0% | |
| CAAGTACTTCCTCTCATAAA+TGG | + | chr8_2:59931090-59931109 | None:intergenic | 35.0% | |
| !! | CTGTAATTGCAAAGGTACTT+CGG | - | chr8_2:59931132-59931151 | Msa1258710:intron | 35.0% |
| !! | GTGCTTTTTAGCATACTCAA+TGG | + | chr8_2:59931689-59931708 | None:intergenic | 35.0% |
| ! | AGAGTTGGTCCTTTAAAGAA+TGG | - | chr8_2:59931915-59931934 | Msa1258710:intron | 35.0% |
| TATACATGTGTCTGCATGTT+TGG | - | chr8_2:59932142-59932161 | Msa1258710:intron | 35.0% | |
| GATGACACTTGAATCTTTGA+AGG | - | chr8_2:59932297-59932316 | Msa1258710:CDS | 35.0% | |
| TTCATATGATCTCTTGAGAC+CGG | + | chr8_2:59932413-59932432 | None:intergenic | 35.0% | |
| ! | TATGCAATCTGTGTCACTAA+AGG | - | chr8_2:59932584-59932603 | Msa1258710:intron | 35.0% |
| ! | ATGCAATCTGTGTCACTAAA+GGG | - | chr8_2:59932585-59932604 | Msa1258710:intron | 35.0% |
| ! | GTCACTAAAGGGTGATATTT+TGG | - | chr8_2:59932596-59932615 | Msa1258710:intron | 35.0% |
| CATCATGTACATATCCTTCT+TGG | + | chr8_2:59932640-59932659 | None:intergenic | 35.0% | |
| GCATCTTATGGACATATCAT+AGG | + | chr8_2:59932812-59932831 | None:intergenic | 35.0% | |
| !! | AGGGTGCTTACTATTGTTTT+TGG | - | chr8_2:59932998-59933017 | Msa1258710:intron | 35.0% |
| ! | TTGGAAATTGGTATTGAGTC+TGG | - | chr8_2:59933070-59933089 | Msa1258710:intron | 35.0% |
| !!! | CTATCCTTTTTAAAGCAGCA+CGG | - | chr8_2:59933251-59933270 | Msa1258710:intron | 35.0% |
| !!! | TATCCTTTTTAAAGCAGCAC+GGG | - | chr8_2:59933252-59933271 | Msa1258710:intron | 35.0% |
| ACTTGATCGAGAAACAATAC+AGG | - | chr8_2:59933291-59933310 | Msa1258710:intron | 35.0% | |
| CACCAACTCTGCATATTTAA+GGG | + | chr8_2:59933332-59933351 | None:intergenic | 35.0% | |
| ACACCAACTCTGCATATTTA+AGG | + | chr8_2:59933333-59933352 | None:intergenic | 35.0% | |
| ATGAGATATCTTGCCTATAC+AGG | + | chr8_2:59933495-59933514 | None:intergenic | 35.0% | |
| GCAAGATATCTCATCATTTG+AGG | - | chr8_2:59933501-59933520 | Msa1258710:intron | 35.0% | |
| GCGTATTTGATTGCCTTAAA+AGG | - | chr8_2:59933638-59933657 | Msa1258710:intron | 35.0% | |
| TGTTAACTGAGTACCTGTAA+TGG | - | chr8_2:59933827-59933846 | Msa1258710:exon | 35.0% | |
| CTTAATCAGTGTACCATTAC+AGG | + | chr8_2:59933843-59933862 | None:intergenic | 35.0% | |
| ! | CTGTAATGGTACACTGATTA+AGG | - | chr8_2:59933841-59933860 | Msa1258710:five_prime_UTR | 35.0% |
| GTTCTTGTTCACTTCACCAA+TGG | - | chr8_2:59929211-59929230 | Msa1258710:three_prime_UTR | 40.0% | |
| AATGCTTTCAACTGAGCCAT+TGG | + | chr8_2:59929230-59929249 | None:intergenic | 40.0% | |
| TCTGTTTAATCGGGTTTGGA+AGG | - | chr8_2:59929474-59929493 | Msa1258710:CDS | 40.0% | |
| TTGAAACCAAGAGCTAGTGT+CGG | - | chr8_2:59929609-59929628 | Msa1258710:CDS | 40.0% | |
| CGAATATCGCTGCAATACAA+AGG | + | chr8_2:59929763-59929782 | None:intergenic | 40.0% | |
| GCGATATTCGGTCAAAATTG+TGG | - | chr8_2:59929773-59929792 | Msa1258710:CDS | 40.0% | |
| ! | ATTTGCGTCGATGTTGAAAG+TGG | - | chr8_2:59930037-59930056 | Msa1258710:intron | 40.0% |
| AAGGTTGTACTTGCTTACAG+TGG | - | chr8_2:59930253-59930272 | Msa1258710:intron | 40.0% | |
| AGAGGATTGTGAACTTGTGA+TGG | + | chr8_2:59930358-59930377 | None:intergenic | 40.0% | |
| AGTAATTTGAGGGGTAACCT+TGG | - | chr8_2:59930407-59930426 | Msa1258710:intron | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | - | chr8_2:59930487-59930506 | Msa1258710:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | - | chr8_2:59930488-59930507 | Msa1258710:intron | 40.0% | |
| AAGATTGTAAATATCCGGCC+AGG | - | chr8_2:59930873-59930892 | Msa1258710:intron | 40.0% | |
| GTAAAACAAATTCTCCTGGC+CGG | + | chr8_2:59930890-59930909 | None:intergenic | 40.0% | |
| TTGTTGATGTGCTACATGTC+CGG | - | chr8_2:59930918-59930937 | Msa1258710:intron | 40.0% | |
| !! | TATGAGAGGAAGTACTTGCT+TGG | - | chr8_2:59931092-59931111 | Msa1258710:intron | 40.0% |
| !! | ATGAGAGGAAGTACTTGCTT+GGG | - | chr8_2:59931093-59931112 | Msa1258710:intron | 40.0% |
| TACCTTTGCAATTACAGGAC+GGG | + | chr8_2:59931129-59931148 | None:intergenic | 40.0% | |
| GTACCTTTGCAATTACAGGA+CGG | + | chr8_2:59931130-59931149 | None:intergenic | 40.0% | |
| ! | CGAAGTACCTTTGCAATTAC+AGG | + | chr8_2:59931134-59931153 | None:intergenic | 40.0% |
| !! | CCTTTAATCTGAAGTGTTGG+GGG | + | chr8_2:59931176-59931195 | None:intergenic | 40.0% |
| !! | GCCTTTAATCTGAAGTGTTG+GGG | + | chr8_2:59931177-59931196 | None:intergenic | 40.0% |
| ! | CGCCTTTAATCTGAAGTGTT+GGG | + | chr8_2:59931178-59931197 | None:intergenic | 40.0% |
| ! | ACGCCTTTAATCTGAAGTGT+TGG | + | chr8_2:59931179-59931198 | None:intergenic | 40.0% |
| GTCAGTGTAAAACACTGACA+CGG | + | chr8_2:59931217-59931236 | None:intergenic | 40.0% | |
| ATACTTATCCACCGTATCTG+TGG | - | chr8_2:59931368-59931387 | Msa1258710:CDS | 40.0% | |
| CAGTACAACAACCACAGATA+CGG | + | chr8_2:59931382-59931401 | None:intergenic | 40.0% | |
| TTCTTTAGCAACATCCACCA+TGG | + | chr8_2:59931428-59931447 | None:intergenic | 40.0% | |
| GTGGATGTTGCTAAAGAAGT+TGG | - | chr8_2:59931430-59931449 | Msa1258710:CDS | 40.0% | |
| TACAGGGAAAGGAAATGATC+AGG | - | chr8_2:59931477-59931496 | Msa1258710:intron | 40.0% | |
| !!! | GATTTTTTTGTCACCGGAAC+GGG | + | chr8_2:59931718-59931737 | None:intergenic | 40.0% |
| !!! | GGATTTTTTTGTCACCGGAA+CGG | + | chr8_2:59931719-59931738 | None:intergenic | 40.0% |
| AATCCATCTATAGCAGGGAT+AGG | - | chr8_2:59931734-59931753 | Msa1258710:intron | 40.0% | |
| TAACCACAAAGCATACCTCA+TGG | + | chr8_2:59931777-59931796 | None:intergenic | 40.0% | |
| CTACAACTAGAGCTAGATTG+AGG | + | chr8_2:59931801-59931820 | None:intergenic | 40.0% | |
| ! | TGCATGTTTGGAAGCACATA+TGG | - | chr8_2:59932154-59932173 | Msa1258710:intron | 40.0% |
| ! | GCATGTTTGGAAGCACATAT+GGG | - | chr8_2:59932155-59932174 | Msa1258710:intron | 40.0% |
| CAAACATTAATGTGGTGCGT+AGG | + | chr8_2:59932186-59932205 | None:intergenic | 40.0% | |
| ATGATATGGGGTCACTAAAC+TGG | - | chr8_2:59932244-59932263 | Msa1258710:intron | 40.0% | |
| TGAGACCGGTAACAAATGAT+AGG | + | chr8_2:59932399-59932418 | None:intergenic | 40.0% | |
| TAAACACCTGTGAGACTCTT+TGG | - | chr8_2:59932768-59932787 | Msa1258710:CDS | 40.0% | |
| AAACACCTGTGAGACTCTTT+GGG | - | chr8_2:59932769-59932788 | Msa1258710:CDS | 40.0% | |
| CTTACTTCCATAAGCTCTCA+AGG | - | chr8_2:59932838-59932857 | Msa1258710:CDS | 40.0% | |
| AAGCTATCCTTGAGAGCTTA+TGG | + | chr8_2:59932848-59932867 | None:intergenic | 40.0% | |
| ATATATAGTTGGGCCCTGTT+TGG | + | chr8_2:59932947-59932966 | None:intergenic | 40.0% | |
| GTCTTGCCATTGAGTGAAAA+GGG | + | chr8_2:59933100-59933119 | None:intergenic | 40.0% | |
| AATGAGATAGGTGGAAAGCA+CGG | - | chr8_2:59933151-59933170 | Msa1258710:intron | 40.0% | |
| TATTCTCAACCATGTCGATC+CGG | + | chr8_2:59933183-59933202 | None:intergenic | 40.0% | |
| ATGGTTGAGAATAGGCTTGT+AGG | - | chr8_2:59933190-59933209 | Msa1258710:intron | 40.0% | |
| GAGTTTATGAAACTCCTGGT+GGG | - | chr8_2:59933227-59933246 | Msa1258710:intron | 40.0% | |
| TTAAAAAGGATAGTCCCACC+AGG | + | chr8_2:59933244-59933263 | None:intergenic | 40.0% | |
| AGCCCTTAAATATGCAGAGT+TGG | - | chr8_2:59933327-59933346 | Msa1258710:intron | 40.0% | |
| CGCAGTAATCTTCTGCATAA+AGG | + | chr8_2:59933398-59933417 | None:intergenic | 40.0% | |
| CAAAGTAACAGAACCTGTTG+TGG | + | chr8_2:59933422-59933441 | None:intergenic | 40.0% | |
| AAAGGTTCTGTTACTGTAGC+AGG | - | chr8_2:59933451-59933470 | Msa1258710:intron | 40.0% | |
| ! | AGAGTCCTTTTAGCCTGTAT+AGG | - | chr8_2:59933479-59933498 | Msa1258710:intron | 40.0% |
| TCTTGCCTATACAGGCTAAA+AGG | + | chr8_2:59933487-59933506 | None:intergenic | 40.0% | |
| GTAGTAGCGCATAGATGTGA+AGG | + | chr8_2:59929254-59929273 | None:intergenic | 45.0% | |
| AGGAGAACCTGTTGCATGAA+GGG | + | chr8_2:59929285-59929304 | None:intergenic | 45.0% | |
| AAGGAGAACCTGTTGCATGA+AGG | + | chr8_2:59929286-59929305 | None:intergenic | 45.0% | |
| TGAAGATTCCGAAGCCAAGA+AGG | - | chr8_2:59930204-59930223 | Msa1258710:intron | 45.0% | |
| GAAGATTCCGAAGCCAAGAA+GGG | - | chr8_2:59930205-59930224 | Msa1258710:intron | 45.0% | |
| GTTGTACTTGCTTACAGTGG+TGG | - | chr8_2:59930256-59930275 | Msa1258710:intron | 45.0% | |
| ACACATCAGTCATTGTCCCA+TGG | - | chr8_2:59930284-59930303 | Msa1258710:intron | 45.0% | |
| GTTGTTGTCATGTGACCGTA+AGG | - | chr8_2:59930443-59930462 | Msa1258710:CDS | 45.0% | |
| TCATGTGACCGTAAGGTCAT+GGG | - | chr8_2:59930450-59930469 | Msa1258710:intron | 45.0% | |
| GACTTGAACCCATGACCTTA+CGG | + | chr8_2:59930461-59930480 | None:intergenic | 45.0% | |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr8_2:59930483-59930502 | None:intergenic | 45.0% |
| CGTGCAATACACCAAATGGT+GGG | - | chr8_2:59930519-59930538 | Msa1258710:intron | 45.0% | |
| !! | TGGTGCTGCAGAGAGAATTA+TGG | - | chr8_2:59930736-59930755 | Msa1258710:intron | 45.0% |
| AGCCTCCCAATTAGTCGTAA+AGG | - | chr8_2:59931010-59931029 | Msa1258710:intron | 45.0% | |
| GTCCTTTACGACTAATTGGG+AGG | + | chr8_2:59931015-59931034 | None:intergenic | 45.0% | |
| AGTCGTAAAGGACTTGAAGG+AGG | - | chr8_2:59931022-59931041 | Msa1258710:intron | 45.0% | |
| CCCCCAACACTTCAGATTAA+AGG | - | chr8_2:59931173-59931192 | Msa1258710:intron | 45.0% | |
| GTAAAACACTGACACGGTGT+TGG | + | chr8_2:59931211-59931230 | None:intergenic | 45.0% | |
| TGACATGTCCGTGTTATGTC+CGG | - | chr8_2:59931295-59931314 | Msa1258710:CDS | 45.0% | |
| TACAACAACCACAGATACGG+TGG | + | chr8_2:59931379-59931398 | None:intergenic | 45.0% | |
| GAACCCCAAGCTAAACATTG+TGG | - | chr8_2:59931624-59931643 | Msa1258710:CDS | 45.0% | |
| !! | GAGCCACAATGTTTAGCTTG+GGG | + | chr8_2:59931630-59931649 | None:intergenic | 45.0% |
| ! | GGAGCCACAATGTTTAGCTT+GGG | + | chr8_2:59931631-59931650 | None:intergenic | 45.0% |
| TGGAGCCACAATGTTTAGCT+TGG | + | chr8_2:59931632-59931651 | None:intergenic | 45.0% | |
| AGCTAAACATTGTGGCTCCA+TGG | - | chr8_2:59931632-59931651 | Msa1258710:intron | 45.0% | |
| TAAACATTGTGGCTCCATGG+AGG | - | chr8_2:59931635-59931654 | Msa1258710:intron | 45.0% | |
| AAACATTGTGGCTCCATGGA+GGG | - | chr8_2:59931636-59931655 | Msa1258710:intron | 45.0% | |
| GTTCCTATCCCTGCTATAGA+TGG | + | chr8_2:59931740-59931759 | None:intergenic | 45.0% | |
| ATAGCAGGGATAGGAACCTA+TGG | - | chr8_2:59931743-59931762 | Msa1258710:intron | 45.0% | |
| TAGCCATGAGGTATGCTTTG+TGG | - | chr8_2:59931771-59931790 | Msa1258710:intron | 45.0% | |
| TTTGTTGGAAGGCCGTCTAA+AGG | - | chr8_2:59932112-59932131 | Msa1258710:intron | 45.0% | |
| !! | GGGTGATATTTTGGAAGACC+CGG | - | chr8_2:59932605-59932624 | Msa1258710:intron | 45.0% |
| TCCTTCTTGGGTTCATTAGC+CGG | + | chr8_2:59932627-59932646 | None:intergenic | 45.0% | |
| GTACATGATGTCTGTAGACC+CGG | - | chr8_2:59932650-59932669 | Msa1258710:intron | 45.0% | |
| GAAGCTTACTCTGCTTGATC+TGG | + | chr8_2:59932684-59932703 | None:intergenic | 45.0% | |
| CAGAGTAAGCTTCCTTCTCA+TGG | - | chr8_2:59932691-59932710 | Msa1258710:intron | 45.0% | |
| ! | GGACTTCCCTTTTCACTCAA+TGG | - | chr8_2:59933091-59933110 | Msa1258710:intron | 45.0% |
| CGTCTTGCCATTGAGTGAAA+AGG | + | chr8_2:59933101-59933120 | None:intergenic | 45.0% | |
| ! | ATAGGTGGAAAGCACGGAAT+TGG | - | chr8_2:59933157-59933176 | Msa1258710:intron | 45.0% |
| GGATCGACATGGTTGAGAAT+AGG | - | chr8_2:59933182-59933201 | Msa1258710:intron | 45.0% | |
| GGAGTTTATGAAACTCCTGG+TGG | - | chr8_2:59933226-59933245 | Msa1258710:intron | 45.0% | |
| !! | ACTCCCGTGCTGCTTTAAAA+AGG | + | chr8_2:59933258-59933277 | None:intergenic | 45.0% |
| !!! | TTTTAAAGCAGCACGGGAGT+TGG | - | chr8_2:59933258-59933277 | Msa1258710:intron | 45.0% |
| !! | TATGCAGAGTTGGTGTATGC+TGG | - | chr8_2:59933337-59933356 | Msa1258710:intron | 45.0% |
| ! | AGTTGGTGTATGCTGGTAGA+TGG | - | chr8_2:59933344-59933363 | Msa1258710:intron | 45.0% |
| AAGATTACTGCGACCACAAC+AGG | - | chr8_2:59933406-59933425 | Msa1258710:intron | 45.0% | |
| TATGATCAAGCTGATGCTGC+TGG | - | chr8_2:59933535-59933554 | Msa1258710:intron | 45.0% | |
| !!! | CTGATGCTGCTGGTTTTATC+CGG | - | chr8_2:59933545-59933564 | Msa1258710:intron | 45.0% |
| !!! | GCTGGTTTTATCCGGCTTTA+CGG | - | chr8_2:59933553-59933572 | Msa1258710:CDS | 45.0% |
| TCATTGGAAGACCGTAAAGC+CGG | + | chr8_2:59933567-59933586 | None:intergenic | 45.0% | |
| GCTTTACGGTCTTCCAATGA+AGG | - | chr8_2:59933567-59933586 | Msa1258710:CDS | 45.0% | |
| !!! | TTATTTTTTTATAAACATTT+AGG | - | chr8_2:59931573-59931592 | Msa1258710:CDS | 5.0% |
| ACAACCTAATTGCGTGCGTG+CGG | + | chr8_2:59929185-59929204 | None:intergenic | 50.0% | |
| ACTCCTTCCCTTCATGCAAC+AGG | - | chr8_2:59929275-59929294 | Msa1258710:three_prime_UTR | 50.0% | |
| GAACCTGTTGCATGAAGGGA+AGG | + | chr8_2:59929281-59929300 | None:intergenic | 50.0% | |
| GGCAGTATCACGCAGTCATA+CGG | - | chr8_2:59930177-59930196 | Msa1258710:intron | 50.0% | |
| GTATCACGCAGTCATACGGA+TGG | - | chr8_2:59930181-59930200 | Msa1258710:intron | 50.0% | |
| CAGTCATTGTCCCATGGTTG+AGG | - | chr8_2:59930290-59930309 | Msa1258710:intron | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | + | chr8_2:59930427-59930446 | None:intergenic | 50.0% | |
| GTCATGTGACCGTAAGGTCA+TGG | - | chr8_2:59930449-59930468 | Msa1258710:intron | 50.0% | |
| AAGGTCATGGGTTCAAGTCC+TGG | - | chr8_2:59930462-59930481 | Msa1258710:intron | 50.0% | |
| GCTGCGTGCAATACACCAAA+TGG | - | chr8_2:59930515-59930534 | Msa1258710:intron | 50.0% | |
| GCGTGCAATACACCAAATGG+TGG | - | chr8_2:59930518-59930537 | Msa1258710:intron | 50.0% | |
| GTGTGCTTCACTGCTGATGT+TGG | - | chr8_2:59930769-59930788 | Msa1258710:intron | 50.0% | |
| GAAGCCAAAGCAAAAGCCAG+TGG | - | chr8_2:59930987-59931006 | Msa1258710:intron | 50.0% | |
| GTATTTCCTTGCTTGCGTGC+TGG | - | chr8_2:59931062-59931081 | Msa1258710:intron | 50.0% | |
| !! | GTGCTGGTGCCATTTATGAG+AGG | - | chr8_2:59931078-59931097 | Msa1258710:intron | 50.0% |
| GTACTTGCTTGGGACCTCAA+TGG | - | chr8_2:59931103-59931122 | Msa1258710:intron | 50.0% | |
| AATTACAGGACGGGCCATTG+AGG | + | chr8_2:59931120-59931139 | None:intergenic | 50.0% | |
| TGAAGAAATGGCACGGACAC+CGG | + | chr8_2:59931317-59931336 | None:intergenic | 50.0% | |
| ! | ACTGATTGATCCGTGCTGAC+TGG | - | chr8_2:59931398-59931417 | Msa1258710:CDS | 50.0% |
| !! | ATTGATCCGTGCTGACTGGT+AGG | - | chr8_2:59931402-59931421 | Msa1258710:CDS | 50.0% |
| TCCTTTCCCTGTACACCCAT+GGG | + | chr8_2:59931470-59931489 | None:intergenic | 50.0% | |
| TTCCTTTCCCTGTACACCCA+TGG | + | chr8_2:59931471-59931490 | None:intergenic | 50.0% | |
| GTAATATCCCACTCCCTCCA+TGG | + | chr8_2:59931652-59931671 | None:intergenic | 50.0% | |
| TGGAGGGAGTGGGATATTAC+AGG | - | chr8_2:59931652-59931671 | Msa1258710:intron | 50.0% | |
| GGAGGGAGTGGGATATTACA+GGG | - | chr8_2:59931653-59931672 | Msa1258710:intron | 50.0% | |
| AAAGCACAACGTTCCCGTTC+CGG | - | chr8_2:59931702-59931721 | Msa1258710:intron | 50.0% | |
| CCTCATGGCTAAGATGCCAT+AGG | + | chr8_2:59931762-59931781 | None:intergenic | 50.0% | |
| CCTATGGCATCTTAGCCATG+AGG | - | chr8_2:59931759-59931778 | Msa1258710:intron | 50.0% | |
| CCTTCTTGGGTTCATTAGCC+GGG | + | chr8_2:59932626-59932645 | None:intergenic | 50.0% | |
| GTTCTCCCAAAGAGTCTCAC+AGG | + | chr8_2:59932777-59932796 | None:intergenic | 50.0% | |
| AGCTCAGCGAGTAAAGTTGC+TGG | + | chr8_2:59933130-59933149 | None:intergenic | 50.0% | |
| CTCGCTGAGCTCAATGAGAT+AGG | - | chr8_2:59933139-59933158 | Msa1258710:intron | 50.0% | |
| GCTGAGCTCAATGAGATAGG+TGG | - | chr8_2:59933142-59933161 | Msa1258710:intron | 50.0% | |
| CTTGTAGGCATGAAGAGTCG+CGG | - | chr8_2:59933205-59933224 | Msa1258710:intron | 50.0% | |
| CGCGGAGTTTATGAAACTCC+TGG | - | chr8_2:59933223-59933242 | Msa1258710:intron | 50.0% | |
| TGATCCACTTCGTGAGTCGA+TGG | - | chr8_2:59933369-59933388 | Msa1258710:intron | 50.0% | |
| ACGGTCTTCCAATGAAGGTC+CGG | - | chr8_2:59933572-59933591 | Msa1258710:CDS | 50.0% | |
| TAATTGCGTGCGTGCGGCTT+TGG | + | chr8_2:59929179-59929198 | None:intergenic | 55.0% | |
| AAAGCCGCACGCACGCAATT+AGG | - | chr8_2:59929178-59929197 | Msa1258710:three_prime_UTR | 55.0% | |
| !! | GTCGGTGCTGGTAGACTTCA+AGG | - | chr8_2:59929627-59929646 | Msa1258710:CDS | 55.0% |
| TCCGAAGCCAAGAAGGGTAG+CGG | - | chr8_2:59930211-59930230 | Msa1258710:intron | 55.0% | |
| CTGAAGCTCCCGCATATGCA+GGG | + | chr8_2:59930558-59930577 | None:intergenic | 55.0% | |
| ACTGAAGCTCCCGCATATGC+AGG | + | chr8_2:59930559-59930578 | None:intergenic | 55.0% | |
| !!! | GGCTCCACTGGCTTTTGCTT+TGG | + | chr8_2:59930994-59931013 | None:intergenic | 55.0% |
| GACTAATTGGGAGGCTCCAC+TGG | + | chr8_2:59931006-59931025 | None:intergenic | 55.0% | |
| GGCCCGTCCTGTAATTGCAA+AGG | - | chr8_2:59931124-59931143 | Msa1258710:intron | 55.0% | |
| ! | ACTGACACGGTGTTGGACAC+TGG | + | chr8_2:59931204-59931223 | None:intergenic | 55.0% |
| CACGGACACCGGACATAACA+CGG | + | chr8_2:59931306-59931325 | None:intergenic | 55.0% | |
| GAGCTGATGCTGTCTCCCAT+GGG | - | chr8_2:59931452-59931471 | Msa1258710:CDS | 55.0% | |
| CTGTCTCCCATGGGTGTACA+GGG | - | chr8_2:59931461-59931480 | Msa1258710:intron | 55.0% | |
| TCCCATGGGTGTACAGGGAA+AGG | - | chr8_2:59931466-59931485 | Msa1258710:intron | 55.0% | |
| CCCGGCTAATGAACCCAAGA+AGG | - | chr8_2:59932623-59932642 | Msa1258710:intron | 55.0% | |
| CATGATGTCTGTAGACCCGG+AGG | - | chr8_2:59932653-59932672 | Msa1258710:intron | 55.0% | |
| ! | CTTGATCTGGAGCATCCTCC+GGG | + | chr8_2:59932671-59932690 | None:intergenic | 55.0% |
| ! | GCTTGATCTGGAGCATCCTC+CGG | + | chr8_2:59932672-59932691 | None:intergenic | 55.0% |
| ! | GTGGAAAGCACGGAATTGGC+CGG | - | chr8_2:59933161-59933180 | Msa1258710:intron | 55.0% |
| CGGTCTTCCAATGAAGGTCC+GGG | - | chr8_2:59933573-59933592 | Msa1258710:CDS | 55.0% | |
| AGCATTGCCCGGACCTTCAT+TGG | + | chr8_2:59933583-59933602 | None:intergenic | 55.0% | |
| GTCCGGGCAATGCTTGAACA+GGG | - | chr8_2:59933589-59933608 | Msa1258710:intron | 55.0% | |
| !! | CCAGCACCGACACTAGCTCT+TGG | + | chr8_2:59929618-59929637 | None:intergenic | 60.0% |
| !! | CCAAGAGCTAGTGTCGGTGC+TGG | - | chr8_2:59929615-59929634 | Msa1258710:CDS | 60.0% |
| CCCGCTACCCTTCTTGGCTT+CGG | + | chr8_2:59930215-59930234 | None:intergenic | 60.0% | |
| CCGAAGCCAAGAAGGGTAGC+GGG | - | chr8_2:59930212-59930231 | Msa1258710:intron | 60.0% | |
| ACGTAGCCCGCTACCCTTCT+TGG | + | chr8_2:59930221-59930240 | None:intergenic | 60.0% | |
| !! | AAGAAGGGTAGCGGGCTACG+TGG | - | chr8_2:59930220-59930239 | Msa1258710:intron | 60.0% |
| AGGGGTAACCTTGGCGCAAC+TGG | - | chr8_2:59930416-59930435 | Msa1258710:CDS | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr8_2:59930531-59930550 | Msa1258710:intron | 60.0% |
| CATATGCAGGGTCCGGGAAG+GGG | + | chr8_2:59930546-59930565 | None:intergenic | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | + | chr8_2:59930547-59930566 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | - | chr8_2:59930546-59930565 | Msa1258710:intron | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | - | chr8_2:59930547-59930566 | Msa1258710:intron | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | - | chr8_2:59930563-59930582 | Msa1258710:intron | 60.0% | |
| ATGGCACCAGCACGCAAGCA+AGG | + | chr8_2:59931071-59931090 | None:intergenic | 60.0% | |
| CCATGGCCTACCAGTCAGCA+CGG | + | chr8_2:59931411-59931430 | None:intergenic | 60.0% | |
| ! | TGCTGACTGGTAGGCCATGG+TGG | - | chr8_2:59931411-59931430 | Msa1258710:CDS | 60.0% |
| GGAGCTGATGCTGTCTCCCA+TGG | - | chr8_2:59931451-59931470 | Msa1258710:CDS | 60.0% | |
| GCTGTCTCCCATGGGTGTAC+AGG | - | chr8_2:59931460-59931479 | Msa1258710:intron | 60.0% | |
| TTGTGGCTCCATGGAGGGAG+TGG | - | chr8_2:59931641-59931660 | Msa1258710:intron | 60.0% | |
| TGTGGCTCCATGGAGGGAGT+GGG | - | chr8_2:59931642-59931661 | Msa1258710:intron | 60.0% | |
| CGGAATTGGCCGGATCGACA+TGG | - | chr8_2:59933171-59933190 | Msa1258710:intron | 60.0% | |
| !! | GCGTCCATCGACTCACGAAG+TGG | + | chr8_2:59933376-59933395 | None:intergenic | 60.0% |
| GGTCCGGGCAATGCTTGAAC+AGG | - | chr8_2:59933588-59933607 | Msa1258710:intron | 60.0% | |
| ! | GGCCCTGTTCAAGCATTGCC+CGG | + | chr8_2:59933594-59933613 | None:intergenic | 60.0% |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr8_2:59930533-59930552 | None:intergenic | 65.0% | |
| CGCATATGCAGGGTCCGGGA+AGG | + | chr8_2:59930548-59930567 | None:intergenic | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | + | chr8_2:59930552-59930571 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | + | chr8_2:59930553-59930572 | None:intergenic | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | - | chr8_2:59930564-59930583 | Msa1258710:intron | 65.0% | |
| !! | CCGTGCTGACTGGTAGGCCA+TGG | - | chr8_2:59931408-59931427 | Msa1258710:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 59929173 | 59933895 | 59929173 | ID=Msa1258710;Name=Msa1258710 |
| chr8_2 | mRNA | 59929173 | 59933895 | 59929173 | ID=Msa1258710-mRNA-1;Parent=Msa1258710;Name=Msa1258710-mRNA-1;_AED=0.07;_eAED=0.08;_QI=57|0.66|0.7|1|1|1|10|277|453 |
| chr8_2 | exon | 59929173 | 59930002 | 59929173 | ID=Msa1258710-mRNA-1:exon:18788;Parent=Msa1258710-mRNA-1 |
| chr8_2 | exon | 59930410 | 59930462 | 59930410 | ID=Msa1258710-mRNA-1:exon:18787;Parent=Msa1258710-mRNA-1 |
| chr8_2 | exon | 59931288 | 59931473 | 59931288 | ID=Msa1258710-mRNA-1:exon:18786;Parent=Msa1258710-mRNA-1 |
| chr8_2 | exon | 59931566 | 59931644 | 59931566 | ID=Msa1258710-mRNA-1:exon:18785;Parent=Msa1258710-mRNA-1 |
| chr8_2 | exon | 59931966 | 59932105 | 59931966 | ID=Msa1258710-mRNA-1:exon:18784;Parent=Msa1258710-mRNA-1 |
| chr8_2 | exon | 59932273 | 59932321 | 59932273 | ID=Msa1258710-mRNA-1:exon:18783;Parent=Msa1258710-mRNA-1 |
| chr8_2 | exon | 59932757 | 59932898 | 59932757 | ID=Msa1258710-mRNA-1:exon:18782;Parent=Msa1258710-mRNA-1 |
| chr8_2 | exon | 59933420 | 59933459 | 59933420 | ID=Msa1258710-mRNA-1:exon:18781;Parent=Msa1258710-mRNA-1 |
| chr8_2 | exon | 59933549 | 59933601 | 59933549 | ID=Msa1258710-mRNA-1:exon:18780;Parent=Msa1258710-mRNA-1 |
| chr8_2 | exon | 59933772 | 59933895 | 59933772 | ID=Msa1258710-mRNA-1:exon:18779;Parent=Msa1258710-mRNA-1 |
| chr8_2 | five_prime_UTR | 59933839 | 59933895 | 59933839 | ID=Msa1258710-mRNA-1:five_prime_utr;Parent=Msa1258710-mRNA-1 |
| chr8_2 | CDS | 59933772 | 59933838 | 59933772 | ID=Msa1258710-mRNA-1:cds;Parent=Msa1258710-mRNA-1 |
| chr8_2 | CDS | 59933549 | 59933601 | 59933549 | ID=Msa1258710-mRNA-1:cds;Parent=Msa1258710-mRNA-1 |
| chr8_2 | CDS | 59933420 | 59933459 | 59933420 | ID=Msa1258710-mRNA-1:cds;Parent=Msa1258710-mRNA-1 |
| chr8_2 | CDS | 59932757 | 59932898 | 59932757 | ID=Msa1258710-mRNA-1:cds;Parent=Msa1258710-mRNA-1 |
| chr8_2 | CDS | 59932273 | 59932321 | 59932273 | ID=Msa1258710-mRNA-1:cds;Parent=Msa1258710-mRNA-1 |
| chr8_2 | CDS | 59931966 | 59932105 | 59931966 | ID=Msa1258710-mRNA-1:cds;Parent=Msa1258710-mRNA-1 |
| chr8_2 | CDS | 59931566 | 59931644 | 59931566 | ID=Msa1258710-mRNA-1:cds;Parent=Msa1258710-mRNA-1 |
| chr8_2 | CDS | 59931288 | 59931473 | 59931288 | ID=Msa1258710-mRNA-1:cds;Parent=Msa1258710-mRNA-1 |
| chr8_2 | CDS | 59930410 | 59930462 | 59930410 | ID=Msa1258710-mRNA-1:cds;Parent=Msa1258710-mRNA-1 |
| chr8_2 | CDS | 59929450 | 59930002 | 59929450 | ID=Msa1258710-mRNA-1:cds;Parent=Msa1258710-mRNA-1 |
| chr8_2 | three_prime_UTR | 59929173 | 59929449 | 59929173 | ID=Msa1258710-mRNA-1:three_prime_utr;Parent=Msa1258710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
