AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0307850

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0307850 MtrunA17_Chr2g0277001 96.261 936 11 2 1 913 1 935 0.0 1856
Msa0307850 MtrunA17_Chr1g0155771 95.726 936 16 2 1 913 1 935 0.0 1843
Msa0307850 MtrunA17_Chr7g0275381 90.096 939 64 7 1 913 1 936 0.0 1576
Msa0307850 MtrunA17_Chr6g0468211 54.483 580 128 11 259 811 62 532 1.11e-174 518
Msa0307850 MtrunA17_Chr2g0316781 55.085 354 47 6 164 516 12 254 2.73e-107 332
Msa0307850 MtrunA17_Chr2g0303811 82.581 155 27 0 542 696 1 155 1.29e-86 273
Msa0307850 MtrunA17_Chr6g0468421 50.388 258 37 4 322 556 1 190 6.13e-65 216
Msa0307850 MtrunA17_Chr6g0468011 60.606 198 47 4 259 454 12 180 6.73e-65 216
Msa0307850 MtrunA17_Chr6g0468411 75.385 130 32 0 534 663 10 139 2.06e-63 211
Msa0307850 MtrunA17_Chr2g0303821 62.385 109 40 1 704 811 1 109 9.42e-38 138
Msa0307850 MtrunA17_Chr6g0467931 67.000 100 31 2 703 800 1 100 5.11e-32 120
Msa0307850 MtrunA17_Chr6g0468001 58.559 111 24 3 703 811 1 91 5.65e-29 112
Msa0307850 MtrunA17_Chr6g0467941 50.526 95 21 1 569 663 24 92 3.23e-21 89.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0307850 AT3G56150.2 64.513 944 260 16 1 913 1 900 0.0 1090
Msa0307850 AT3G56150.1 64.513 944 260 16 1 913 1 900 0.0 1090
Msa0307850 AT3G22860.1 60.714 616 200 7 243 825 181 787 0.0 739

Find 266 sgRNAs with CRISPR-Local

Find 386 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGAAGTTCAAAGAGATTC+TGG 0.204715 2_4:+981487 Msa0307850:CDS
GGCTAATCTGTTGTTGATTT+AGG 0.213717 2_4:+980397 Msa0307850:five_prime_UTR
GCTGGGACTCATCTTCTTCT+TGG 0.219134 2_4:-981123 None:intergenic
TGTAAAGATTAGGGATCTTT+TGG 0.232109 2_4:-981043 None:intergenic
ACATGATCCCTGACAGTTTC+AGG 0.235192 2_4:-983700 None:intergenic
TGTTTGTCTGAACTTTATTC+TGG 0.235265 2_4:+982459 Msa0307850:CDS
CAATAATGTCAAAGGCCTTC+TGG 0.238181 2_4:-983759 None:intergenic
GGTTTCCGCGCCACAAGTTC+CGG 0.248793 2_4:-982160 None:intergenic
GCCACAAGGGTTCTTATTAA+TGG 0.250263 2_4:+983730 Msa0307850:CDS
AAGCTGTAATACTGAATAAA+TGG 0.260781 2_4:-984481 None:intergenic
TGCTCAGGCTTCTGCTAATA+AGG 0.263529 2_4:+981097 Msa0307850:CDS
GGAAAATAGCAGGACCTTAA+TGG 0.268698 2_4:+982192 Msa0307850:CDS
GCTAATCTGTTGTTGATTTA+GGG 0.278783 2_4:+980398 Msa0307850:five_prime_UTR
GTTGAAGGCTTTGGCATTGC+TGG 0.280294 2_4:-981141 None:intergenic
GAATCATCAACCTTTATGTT+TGG 0.286060 2_4:-981731 None:intergenic
CCCTTGAGTGTTCAACATTT+CGG 0.288283 2_4:-984032 None:intergenic
TCCAGTTCCCTTCCTGCCCC+TGG 0.302069 2_4:-981513 None:intergenic
CTTCATTGAGTTGAAGGCTT+TGG 0.318286 2_4:-981150 None:intergenic
CAGATTTAACAACACGCTTT+TGG 0.326666 2_4:-980878 None:intergenic
TTATGAAGCAACGAGAAAAT+TGG 0.328433 2_4:+982045 Msa0307850:CDS
GAGATGAGTGAGGAGTTAAA+AGG 0.329554 2_4:+982097 Msa0307850:CDS
TTGTCTTGTCTTGTCTTGTC+TGG 0.330956 2_4:-980439 None:intergenic
TATGCACTTAATCTAGATTC+TGG 0.334171 2_4:+984560 Msa0307850:three_prime_UTR
AATCATCAACCTTTATGTTT+GGG 0.349179 2_4:-981730 None:intergenic
GATTATGCCGCTGCAGCTGC+TGG 0.352272 2_4:+984180 Msa0307850:CDS
CCGGGATTTAGTACCTGTTC+TGG 0.353112 2_4:-982543 None:intergenic
GGTGGTAGTGGAACGTCTTC+AGG 0.355830 2_4:+984204 Msa0307850:CDS
ATTAGCCGCTGCTACAAAAT+CGG 0.356247 2_4:-980381 None:intergenic
TAGCAAGAAAGACAGGCTTT+TGG 0.359604 2_4:+981415 Msa0307850:CDS
TACCCGCATGGTTAGCCTTA+GGG 0.360330 2_4:+984431 Msa0307850:CDS
GGAGGCGGCTATCAGAATTC+AGG 0.361871 2_4:+984360 Msa0307850:CDS
ACACTCAAGGGTGCAGGCTT+TGG 0.372615 2_4:+984044 Msa0307850:CDS
ATGATGAAGAGAAGGTAAAT+AGG 0.373547 2_4:-983873 None:intergenic
CAATGCTTTCAAGATATTCC+TGG 0.380146 2_4:-981952 None:intergenic
AGATTTATATGCATATGATA+TGG 0.383704 2_4:-983526 None:intergenic
ATGACCGTAGAGGGAGATAA+TGG 0.387791 2_4:+982073 Msa0307850:CDS
GGCGCGGAAACCCACCTTCC+CGG 0.387923 2_4:+982171 Msa0307850:CDS
GCAAGCTGGGATCAGCCAAC+TGG 0.390557 2_4:+983997 Msa0307850:CDS
TCCGGCTTCCTGAGCTGATC+AGG 0.393176 2_4:-981308 None:intergenic
AGATTTCAAAGCTTCTTCTA+AGG 0.393340 2_4:+981976 Msa0307850:CDS
TAGATAATTTCTCAGTCAAC+TGG 0.394228 2_4:-984071 None:intergenic
CTACCCGCATGGTTAGCCTT+AGG 0.397357 2_4:+984430 Msa0307850:CDS
GCCAGGGGCAGGAAGGGAAC+TGG 0.399839 2_4:+981512 Msa0307850:CDS
GCCTTGCCTTGTTTGAGAAT+AGG 0.400255 2_4:-984247 None:intergenic
TGATGATGGCGATGCTCCTT+GGG 0.400541 2_4:+981382 Msa0307850:CDS
GCTCAGTTTGATGTTAATCC+AGG 0.401276 2_4:+981626 Msa0307850:CDS
CGGGTCCTCCTGAAACTGTC+AGG 0.402283 2_4:+983692 Msa0307850:CDS
AGAGCCTTGATGTAAAGATT+AGG 0.402756 2_4:-981053 None:intergenic
TACAAAATCGGGAAAGATAT+AGG 0.404456 2_4:-980369 None:intergenic
GTGATGATGGCGATGCTCCT+TGG 0.404468 2_4:+981381 Msa0307850:CDS
GCTTGAAGATTTCCTTGCTC+AGG 0.408980 2_4:+981082 Msa0307850:CDS
AGATACCTGGTAAAAGAATC+TGG 0.410560 2_4:-980623 None:intergenic
ATGTAAGATGCACTGATTCC+AGG 0.412950 2_4:-983555 None:intergenic
GAGCCTTGATGTAAAGATTA+GGG 0.415850 2_4:-981052 None:intergenic
ATGACGGACCCATTCATGTC+TGG 0.416244 2_4:+981795 Msa0307850:CDS
CCGTTTGGATCGGTTGGGGC+AGG 0.418045 2_4:-980801 None:intergenic
GCCGCTGCAGCTGCTGGTGG+TGG 0.418701 2_4:+984186 Msa0307850:CDS
GTTTCCGCGCCACAAGTTCC+GGG 0.419096 2_4:-982159 None:intergenic
TGATACTAACACATCCATTA+AGG 0.425287 2_4:-982206 None:intergenic
GCAGCTGCTGGTGGTGGTAG+TGG 0.425549 2_4:+984192 Msa0307850:CDS
AATGAGTTCAACCCTCTTCA+AGG 0.428889 2_4:-982002 None:intergenic
AACAGGGCTATGTCACAGTT+AGG 0.435704 2_4:+982393 Msa0307850:intron
TTGAAGGCTTTGGCATTGCT+GGG 0.436119 2_4:-981140 None:intergenic
TGAACATTGGCCGCCATGTT+GGG 0.437116 2_4:-983598 None:intergenic
CGTGCAGCACCCAAACATAA+AGG 0.438376 2_4:+981721 Msa0307850:CDS
TGCCCATCTCTTCGCCTTGG+AGG 0.438441 2_4:-984156 None:intergenic
TCAAAGAGATTCTGGAAGCC+AGG 0.439840 2_4:+981495 Msa0307850:CDS
GCATATAAATCTTGAGCTCC+TGG 0.445116 2_4:+983537 Msa0307850:CDS
GGCATATGCCCACTGAGGCC+TGG 0.449256 2_4:-981644 None:intergenic
TCTTACATCTGCTATGCTGC+TGG 0.451584 2_4:+983570 Msa0307850:CDS
CATTGGGAATTTGGGGAAGG+GGG 0.454395 2_4:-984641 None:intergenic
ATGAGGAGCTTCATGCAAGC+TGG 0.457408 2_4:+983983 Msa0307850:CDS
TTCAGTCAAGCTGGTGGGAG+TGG 0.458684 2_4:+984309 Msa0307850:CDS
AAAAGCAAATACTACGTTGA+TGG 0.462288 2_4:+980825 Msa0307850:CDS
GGACGAGGAACGGGTGGAGG+CGG 0.464180 2_4:+984345 Msa0307850:CDS
ATGAGAATGAAACTAAGAAA+GGG 0.464510 2_4:+981765 Msa0307850:CDS
AAGGCAAGGCAGCGGACGTA+CGG 0.464963 2_4:+984260 Msa0307850:CDS
TCAGAATCCGACACGGGCTC+CGG 0.466090 2_4:-981326 None:intergenic
GTCTTGTCTTGTCTGGAAGA+TGG 0.466648 2_4:-980432 None:intergenic
ATGAACATTGGCCGCCATGT+TGG 0.468265 2_4:-983599 None:intergenic
AATTATCTTTCAGGAAAGGT+TGG 0.471050 2_4:+983486 Msa0307850:intron
TCCTGCCCATCTCTTCGCCT+TGG 0.472750 2_4:-984159 None:intergenic
TTAGCCGCTGCTACAAAATC+GGG 0.473817 2_4:-980380 None:intergenic
AACTGTCAGGGATCATGTTA+TGG 0.475362 2_4:+983705 Msa0307850:CDS
TATTCTAGAGGACGAGGAAC+GGG 0.476091 2_4:+984336 Msa0307850:CDS
ACATTGGGAATTTGGGGAAG+GGG 0.484034 2_4:-984642 None:intergenic
ATTAAGTGCATAATGATAAA+CGG 0.484508 2_4:-984549 None:intergenic
GGGAACTGGAAGGTTTGAAC+AGG 0.485450 2_4:+981526 Msa0307850:CDS
GATTCTGAAACTTCTGAGCT+TGG 0.486351 2_4:+981341 Msa0307850:CDS
AGAGGACGAGGAACGGGTGG+AGG 0.486498 2_4:+984342 Msa0307850:CDS
TAAGTTGCCCCAGACATGAA+TGG 0.490965 2_4:-981804 None:intergenic
GTCCTTCAGCATTTCTAGCA+CGG 0.492013 2_4:-983821 None:intergenic
TCATGAAAAGACTCCAGAAC+AGG 0.493182 2_4:+982530 Msa0307850:CDS
GTGAATATGTTGAGAGACTC+AGG 0.493281 2_4:+981894 Msa0307850:CDS
CAGAATTCAGGGAGGACTCA+AGG 0.493339 2_4:+984372 Msa0307850:CDS
GAAGCAAGGTTAGGCGGCGG+TGG 0.493372 2_4:+984123 Msa0307850:CDS
AAATCAAGGAAGAGGCGCTT+AGG 0.494321 2_4:+983845 Msa0307850:CDS
TCCGAAATGTTGAACACTCA+AGG 0.494976 2_4:+984031 Msa0307850:CDS
TGACGGACCCATTCATGTCT+GGG 0.497542 2_4:+981796 Msa0307850:CDS
GGAAAAGGATGACGAGGATG+AGG 0.497694 2_4:+981247 Msa0307850:CDS
GGCAGCGGACGTACGGGATA+CGG 0.498017 2_4:+984267 Msa0307850:CDS
CTTGGTAATGACAGGCCTCC+TGG 0.498069 2_4:+981359 Msa0307850:CDS
CAGGAATATCTTGAAAGCAT+TGG 0.498525 2_4:+981953 Msa0307850:CDS
TTATTCTGGTGGACGGGTGA+AGG 0.499453 2_4:+982473 Msa0307850:CDS
GTACGGGATACGGTGGAGGA+AGG 0.505304 2_4:+984277 Msa0307850:CDS
CTGGAAGCCAGGGGCAGGAA+GGG 0.505830 2_4:+981506 Msa0307850:CDS
ATGTTAATCCAGGCCTCAGT+GGG 0.508312 2_4:+981636 Msa0307850:CDS
ACCCGCATGGTTAGCCTTAG+GGG 0.508509 2_4:+984432 Msa0307850:CDS
AGATTCTGGAAGCCAGGGGC+AGG 0.509743 2_4:+981501 Msa0307850:CDS
AGAATTCAGGGAGGACTCAA+GGG 0.510031 2_4:+984373 Msa0307850:CDS
AGAATCTGCAGCTTCTGAGC+AGG 0.511073 2_4:-981587 None:intergenic
AAGTTGCCCCAGACATGAAT+GGG 0.512091 2_4:-981803 None:intergenic
GATGAGAATGAAACTAAGAA+AGG 0.515170 2_4:+981764 Msa0307850:CDS
TCCAAGGCGAAGAGATGGGC+AGG 0.515359 2_4:+984158 Msa0307850:CDS
AAGGTTAGGCGGCGGTGGGT+TGG 0.516660 2_4:+984128 Msa0307850:CDS
ACCTGATCAGCTCAGGAAGC+CGG 0.516893 2_4:+981307 Msa0307850:CDS
TCATTGAACCTGATCAGCTC+AGG 0.519230 2_4:+981300 Msa0307850:CDS
TGCTCCGTTTGTTGTTACCC+CGG 0.519622 2_4:+982141 Msa0307850:CDS
GATCCCTAATCTTTACATCA+AGG 0.521376 2_4:+981049 Msa0307850:CDS
AGGACTTGATTATCAAATGT+AGG 0.523141 2_4:+981204 Msa0307850:CDS
CCGAAATGTTGAACACTCAA+GGG 0.523872 2_4:+984032 Msa0307850:CDS
CTCAACATATTCACGTGTGT+GGG 0.525787 2_4:-981885 None:intergenic
GTGGGTTGGATCTGCCTCCA+AGG 0.528953 2_4:+984142 Msa0307850:CDS
TCCCCTAAGGCTAACCATGC+GGG 0.529790 2_4:-984433 None:intergenic
TGTTCTTGCACAGAATGTCC+AGG 0.530188 2_4:+981934 Msa0307850:CDS
CTGAACTTTATTCTGGTGGA+CGG 0.530497 2_4:+982466 Msa0307850:CDS
AAAAGCTTAGCAAGAAAGAC+AGG 0.531266 2_4:+981408 Msa0307850:CDS
AACATTGGGAATTTGGGGAA+GGG 0.531414 2_4:-984643 None:intergenic
TTTACCGTTTGGATCGGTTG+GGG 0.531670 2_4:-980805 None:intergenic
GTAAAAGAATCTGGAAGTCA+TGG 0.531738 2_4:-980614 None:intergenic
CTCTCCATTATCTCCCTCTA+CGG 0.531803 2_4:-982077 None:intergenic
GGGCTGGTTTCTGAAGCGCA+TGG 0.535363 2_4:+982435 Msa0307850:CDS
CCACCTTCCCGGAAAATAGC+AGG 0.535658 2_4:+982182 Msa0307850:CDS
GACTCATAAGCAACAGATCA+CGG 0.536368 2_4:-982321 None:intergenic
AGGCAAGGCAGCGGACGTAC+GGG 0.536672 2_4:+984261 Msa0307850:CDS
GACAGGCCTCCTGGTGATGA+TGG 0.536973 2_4:+981368 Msa0307850:CDS
ATGCTATCAAGATCAATGAC+TGG 0.537887 2_4:+980952 Msa0307850:CDS
TGTTGTTACCCCGGAACTTG+TGG 0.539965 2_4:+982150 Msa0307850:CDS
CTGCCTCCAAGGCGAAGAGA+TGG 0.540348 2_4:+984153 Msa0307850:CDS
TTGTCTGAACTTTATTCTGG+TGG 0.542410 2_4:+982462 Msa0307850:CDS
CAAGCTGGGATCAGCCAACT+GGG 0.543584 2_4:+983998 Msa0307850:CDS
GTGGAACGTCTTCAGGTGGC+AGG 0.543676 2_4:+984211 Msa0307850:CDS
AGTTCCGGGGTAACAACAAA+CGG 0.544060 2_4:-982145 None:intergenic
TGAGGAGCTTCATGCAAGCT+GGG 0.544437 2_4:+983984 Msa0307850:CDS
TAGGGAGAGTCCTGAGAGTG+AGG 0.545078 2_4:+981223 Msa0307850:CDS
GGGGCAGGTTCAGTATCACT+AGG 0.547225 2_4:-980786 None:intergenic
TATGCCGCTGCAGCTGCTGG+TGG 0.547820 2_4:+984183 Msa0307850:CDS
TGTTGAACACTCAAGGGTGC+AGG 0.547851 2_4:+984038 Msa0307850:CDS
GGACTTGATTATCAAATGTA+GGG 0.548379 2_4:+981205 Msa0307850:CDS
AAGAGATGCAATAATGTCAA+AGG 0.548581 2_4:-983767 None:intergenic
TCCTATTCTCAAACAAGGCA+AGG 0.549766 2_4:+984246 Msa0307850:CDS
CTTCTGAGCTTGGTAATGAC+AGG 0.550457 2_4:+981351 Msa0307850:CDS
AAGATATAGGTAGATAGATA+CGG 0.551424 2_4:-980356 None:intergenic
CATAAAGGTTGATGATTCTG+TGG 0.552363 2_4:+981736 Msa0307850:CDS
GAAGGACAAAATCAAGGAAG+AGG 0.552869 2_4:+983837 Msa0307850:CDS
ACGCTTTGCATCATGAACAT+TGG 0.554176 2_4:-983611 None:intergenic
GCGGGTAGAAGTATCTCCGT+GGG 0.555993 2_4:-984415 None:intergenic
CTTCTAAGGTAGCCTTGAAG+AGG 0.561694 2_4:+981990 Msa0307850:CDS
CAAAGAGATTCTGGAAGCCA+GGG 0.563451 2_4:+981496 Msa0307850:CDS
TACGGGATACGGTGGAGGAA+GGG 0.564228 2_4:+984278 Msa0307850:CDS
GGGGTAACAACAAACGGAGC+AGG 0.564444 2_4:-982139 None:intergenic
TCTGGAAGCCAGGGGCAGGA+AGG 0.564829 2_4:+981505 Msa0307850:CDS
AATGCTGAAGGACAAAATCA+AGG 0.565908 2_4:+983831 Msa0307850:CDS
CCTGCCCCAACCGATCCAAA+CGG 0.567390 2_4:+980801 Msa0307850:CDS
AGTGAGAAACAAACATTCAC+GGG 0.567914 2_4:+983673 Msa0307850:CDS
CAGTGAGAAACAAACATTCA+CGG 0.568401 2_4:+983672 Msa0307850:CDS
GCATTATCGTTCAGTCAAGC+TGG 0.568957 2_4:+984300 Msa0307850:CDS
GTGTCCCATGTGATCTCACT+AGG 0.569429 2_4:-981458 None:intergenic
GGACGTACGGGATACGGTGG+AGG 0.570293 2_4:+984273 Msa0307850:CDS
CGGAAAATAATGCACCCAGT+TGG 0.571165 2_4:-984012 None:intergenic
ATCATATGATTCTTTGAGCG+TGG 0.572793 2_4:+983891 Msa0307850:CDS
GGAGCATCGCCATCATCACC+AGG 0.573601 2_4:-981377 None:intergenic
TGCCTCCAAGGCGAAGAGAT+GGG 0.574902 2_4:+984154 Msa0307850:CDS
ATCATGTTATGGCTGCCACA+AGG 0.575690 2_4:+983716 Msa0307850:CDS
CACTGACCTCAAGCAAGCGT+CGG 0.576302 2_4:-983654 None:intergenic
GGGAGAGTCCTGAGAGTGAG+GGG 0.577170 2_4:+981225 Msa0307850:CDS
GAGGCGGCTATCAGAATTCA+GGG 0.577279 2_4:+984361 Msa0307850:CDS
GCTGCTGGAGGTTCCCAACA+TGG 0.578381 2_4:+983585 Msa0307850:CDS
AGAATCATATGATGAAGAGA+AGG 0.578443 2_4:-983881 None:intergenic
GTATCACTGATATACAAATA+CGG 0.579558 2_4:+982223 Msa0307850:CDS
TCTCAACATATTCACGTGTG+TGG 0.579942 2_4:-981886 None:intergenic
TGAACTTTATTCTGGTGGAC+GGG 0.580196 2_4:+982467 Msa0307850:CDS
AAAAGCCTAGTGAGATCACA+TGG 0.585381 2_4:+981453 Msa0307850:CDS
AAACATTGGGAATTTGGGGA+AGG 0.586416 2_4:-984644 None:intergenic
TACATCTGCTATGCTGCTGG+AGG 0.586476 2_4:+983573 Msa0307850:CDS
AGGTTCAATGATCTCATCAT+CGG 0.587424 2_4:-981288 None:intergenic
CTATTCTAGAGGACGAGGAA+CGG 0.587856 2_4:+984335 Msa0307850:CDS
GTTGCTTCATAAACCTCATG+CGG 0.588345 2_4:-982034 None:intergenic
GCTACAGAAGCAAGGTTAGG+CGG 0.590150 2_4:+984117 Msa0307850:CDS
TGAGAATGAAACTAAGAAAG+GGG 0.591503 2_4:+981766 Msa0307850:CDS
GTCAAGCACGAACTCCCCTA+AGG 0.592556 2_4:-984446 None:intergenic
ACCACCACCAGCAGCTGCAG+CGG 0.592682 2_4:-984187 None:intergenic
TTCTAAGGTAGCCTTGAAGA+GGG 0.593307 2_4:+981991 Msa0307850:CDS
GAATTTCCGACGCTTGCTTG+AGG 0.593870 2_4:+983648 Msa0307850:CDS
AGAGCTACAGAAGCAAGGTT+AGG 0.594295 2_4:+984114 Msa0307850:CDS
GTGAAGGAATTGCTTGCGCA+AGG 0.594439 2_4:+982489 Msa0307850:CDS
ACTCATAAGCAACAGATCAC+GGG 0.595404 2_4:-982320 None:intergenic
AGATAATGGAGAGATGAGTG+AGG 0.595500 2_4:+982087 Msa0307850:CDS
AAGCAAGGTTAGGCGGCGGT+GGG 0.595912 2_4:+984124 Msa0307850:CDS
CATTTACTACAAACCGCATG+AGG 0.596878 2_4:+982021 Msa0307850:CDS
TGCTATCAAGATCAATGACT+GGG 0.597590 2_4:+980953 Msa0307850:CDS
AGGAAAGGTTGGAAAGAAGA+CGG 0.598493 2_4:+983497 Msa0307850:intron
GGGAGTGGCGGCTATTCTAG+AGG 0.598572 2_4:+984324 Msa0307850:CDS
TCTCAAACAAGGCAAGGCAG+CGG 0.598804 2_4:+984252 Msa0307850:CDS
TTTCCGCGCCACAAGTTCCG+GGG 0.599206 2_4:-982158 None:intergenic
AGGGAGAGTCCTGAGAGTGA+GGG 0.600175 2_4:+981224 Msa0307850:CDS
CGGAGATACTTCTACCCGCA+TGG 0.602013 2_4:+984419 Msa0307850:CDS
TCTAGAGGACGAGGAACGGG+TGG 0.602993 2_4:+984339 Msa0307850:CDS
TTGGCTGAGATGACCGTAGA+GGG 0.603596 2_4:+982064 Msa0307850:CDS
ATGAAAGAGCTACAGAAGCA+AGG 0.604351 2_4:+984109 Msa0307850:CDS
AGTCAAGCTGGTGGGAGTGG+CGG 0.604909 2_4:+984312 Msa0307850:CDS
AATATCAGTGGGTTCATCGT+CGG 0.606448 2_4:-980754 None:intergenic
CAGGAAGCCGGAGCCCGTGT+CGG 0.608070 2_4:+981319 Msa0307850:CDS
GGCGGCTATTCTAGAGGACG+AGG 0.609346 2_4:+984330 Msa0307850:CDS
ACAAGACAAGACAAGACAAG+AGG 0.610589 2_4:+980443 Msa0307850:five_prime_UTR
AAGAATCTGGAAGTCATGGT+AGG 0.611325 2_4:-980610 None:intergenic
AGGTTCATCATCAATATCAG+TGG 0.614512 2_4:-980766 None:intergenic
GGGTCCTCCTGAAACTGTCA+GGG 0.614834 2_4:+983693 Msa0307850:CDS
GAATTCAGGGAGGACTCAAG+GGG 0.615559 2_4:+984374 Msa0307850:CDS
TTATTGCATCTCTTGATGTG+TGG 0.615728 2_4:+983776 Msa0307850:CDS
ACTTGTCCTATTCTCAAACA+AGG 0.620485 2_4:+984241 Msa0307850:CDS
ACAGAAGCAAGGTTAGGCGG+CGG 0.622574 2_4:+984120 Msa0307850:CDS
GGTTCATCATCAATATCAGT+GGG 0.623181 2_4:-980765 None:intergenic
CGCCGTGCTAGAAATGCTGA+AGG 0.624899 2_4:+983819 Msa0307850:CDS
TCCATTAATAAGAACCCTTG+TGG 0.625098 2_4:-983731 None:intergenic
TATTAGCAGAAGCCTGAGCA+AGG 0.625753 2_4:-981094 None:intergenic
TCATGTTATGGCTGCCACAA+GGG 0.627218 2_4:+983717 Msa0307850:CDS
TATCGTTCAGTCAAGCTGGT+GGG 0.636549 2_4:+984304 Msa0307850:CDS
GAACGTCTTCAGGTGGCAGG+TGG 0.637601 2_4:+984214 Msa0307850:CDS
TTATCGTTCAGTCAAGCTGG+TGG 0.639308 2_4:+984303 Msa0307850:CDS
AAGAAAGGGGATGACTATGA+CGG 0.642172 2_4:+981779 Msa0307850:CDS
GTGTTCATAGTATTGTCAGT+AGG 0.642718 2_4:+983950 Msa0307850:CDS
GATGACAGTGACGATGATGA+TGG 0.643930 2_4:+980855 Msa0307850:CDS
TCAACATATTCACGTGTGTG+GGG 0.645878 2_4:-981884 None:intergenic
GAAGTTTCAGAATCCGACAC+GGG 0.650738 2_4:-981332 None:intergenic
TATTAATGGAGATTTCCAGA+AGG 0.655339 2_4:+983744 Msa0307850:CDS
AAAATGCGTGCAGAATATGC+TGG 0.655482 2_4:+981682 Msa0307850:CDS
GGGGCAGGAAGGGAACTGGA+AGG 0.655940 2_4:+981516 Msa0307850:CDS
GGTAGTGGAACGTCTTCAGG+TGG 0.658306 2_4:+984207 Msa0307850:CDS
TGCGGGTAGAAGTATCTCCG+TGG 0.660998 2_4:-984416 None:intergenic
CTCCCCTAAGGCTAACCATG+CGG 0.664230 2_4:-984434 None:intergenic
TCTACTTTGAGGGGACCCCA+CGG 0.665115 2_4:+984399 Msa0307850:CDS
TTACCCCGGAACTTGTGGCG+CGG 0.666773 2_4:+982155 Msa0307850:CDS
CAAACTCATCAAGAAGAGCA+TGG 0.667504 2_4:-982291 None:intergenic
GATGTTAATCCAGGCCTCAG+TGG 0.669943 2_4:+981635 Msa0307850:CDS
CAGTAGGATGATGATCAATG+AGG 0.670922 2_4:+983966 Msa0307850:CDS
GGAGAGTCCTGAGAGTGAGG+GGG 0.672377 2_4:+981226 Msa0307850:CDS
AGCGGACGTACGGGATACGG+TGG 0.674527 2_4:+984270 Msa0307850:CDS
TGTGCAAGAACAACAAACTG+AGG 0.676475 2_4:-981923 None:intergenic
GGCATATGCCCATAAATGTG+TGG 0.678845 2_4:+981657 Msa0307850:CDS
GACGGACCCATTCATGTCTG+GGG 0.680909 2_4:+981797 Msa0307850:CDS
TGAATATGTTGAGAGACTCA+GGG 0.682868 2_4:+981895 Msa0307850:CDS
AGAAGTTTCAGAATCCGACA+CGG 0.685846 2_4:-981333 None:intergenic
ATTGGCTGAGATGACCGTAG+AGG 0.686209 2_4:+982063 Msa0307850:CDS
CTGACAATACTATGAACACG+AGG 0.689117 2_4:-983946 None:intergenic
GCTGGAGGTTCCCAACATGG+CGG 0.693046 2_4:+983588 Msa0307850:CDS
ATTCTTGATCTGATCAACAG+TGG 0.701566 2_4:-980931 None:intergenic
AAAGAGATTCTGGAAGCCAG+GGG 0.701656 2_4:+981497 Msa0307850:CDS
GCATCGCCATCATCACCAGG+AGG 0.707685 2_4:-981374 None:intergenic
TGATCCCTGACAGTTTCAGG+AGG 0.717851 2_4:-983697 None:intergenic
AATTCAGGGAGGACTCAAGG+GGG 0.722566 2_4:+984375 Msa0307850:CDS
CGGGTAGAAGTATCTCCGTG+GGG 0.734112 2_4:-984414 None:intergenic
AAAGCCTAGTGAGATCACAT+GGG 0.747188 2_4:+981454 Msa0307850:CDS
GAAGAACAATAAGCAATACG+AGG 0.757858 2_4:+981184 Msa0307850:CDS
TTATGGGCATATGCCCACTG+AGG 0.770132 2_4:-981649 None:intergenic
GCGGCTATCAGAATTCAGGG+AGG 0.799750 2_4:+984364 Msa0307850:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAGAAATAGAAAAAATAAA+AGG + chr2_4:982720-982739 Msa0307850:intron 10.0%
!! CAGAAATTAAATTTGATTAT+TGG + chr2_4:982849-982868 Msa0307850:intron 15.0%
!!! TATTTTCCTTTAATTTTCTA+TGG - chr2_4:983029-983048 None:intergenic 15.0%
!!! TAAATTTTTTTGAATTGAGT+GGG - chr2_4:983100-983119 None:intergenic 15.0%
!!! ATAAATTTTTTTGAATTGAG+TGG - chr2_4:983101-983120 None:intergenic 15.0%
!!! AAAAAATTTATTTTTGCCAT+TGG + chr2_4:983110-983129 Msa0307850:intron 15.0%
!!! ATGCATTTTTTTTTTTTTAG+AGG + chr2_4:984716-984735 Msa0307850:three_prime_UTR 15.0%
!! AAAAGAACATATTATTGCAT+TGG - chr2_4:980705-980724 None:intergenic 20.0%
!!! ATATGTTCTTTTCTATTGTT+AGG + chr2_4:980713-980732 Msa0307850:intron 20.0%
!!! TATGTTCTTTTCTATTGTTA+GGG + chr2_4:980714-980733 Msa0307850:intron 20.0%
!! ATCTATTTGAAAAAAATAGC+CGG - chr2_4:982565-982584 None:intergenic 20.0%
!! TGTCAATGTAAAGATAAATA+AGG - chr2_4:982769-982788 None:intergenic 20.0%
!! TATAATATTATTGCTCAACT+TGG + chr2_4:982816-982835 Msa0307850:intron 20.0%
!!! TGTTTTTGTTTTTGTTTCTA+AGG + chr2_4:982912-982931 Msa0307850:intron 20.0%
!!! TTTTATTTTCATCTTGTTAC+TGG + chr2_4:982946-982965 Msa0307850:intron 20.0%
!!! TTTATTTTCATCTTGTTACT+GGG + chr2_4:982947-982966 Msa0307850:intron 20.0%
!! TATAAGCCATAGAAAATTAA+AGG + chr2_4:983020-983039 Msa0307850:intron 20.0%
!!! AAATTTTTTTGAATTGAGTG+GGG - chr2_4:983099-983118 None:intergenic 20.0%
!!! CATACTTTATATTGGATTTT+TGG + chr2_4:983378-983397 Msa0307850:intron 20.0%
!! CTATTCTTTAATTATCTTTC+AGG + chr2_4:983477-983496 Msa0307850:intron 20.0%
!! AGATTTATATGCATATGATA+TGG - chr2_4:983529-983548 None:intergenic 20.0%
!! ATTAAGTGCATAATGATAAA+CGG - chr2_4:984552-984571 None:intergenic 20.0%
! AAGATATAGGTAGATAGATA+CGG - chr2_4:980359-980378 None:intergenic 25.0%
!!! CATTTTTTCCACACATTTAT+GGG - chr2_4:981668-981687 None:intergenic 25.0%
! AATCATCAACCTTTATGTTT+GGG - chr2_4:981733-981752 None:intergenic 25.0%
! ATGAGAATGAAACTAAGAAA+GGG + chr2_4:981765-981784 Msa0307850:CDS 25.0%
! GTATCACTGATATACAAATA+CGG + chr2_4:982223-982242 Msa0307850:CDS 25.0%
!!! TCGACACAAATTTTTTTAAC+AGG + chr2_4:982376-982395 Msa0307850:intron 25.0%
!!! CGACACAAATTTTTTTAACA+GGG + chr2_4:982377-982396 Msa0307850:intron 25.0%
! TCTATTTGAAAAAAATAGCC+GGG - chr2_4:982564-982583 None:intergenic 25.0%
!! CTTTATTAATGTACTTGTTG+TGG + chr2_4:982599-982618 Msa0307850:intron 25.0%
! AGAAAAAATAAAAGGTGATC+TGG + chr2_4:982728-982747 Msa0307850:intron 25.0%
!! TTATTTTCATCTTGTTACTG+GGG + chr2_4:982948-982967 Msa0307850:intron 25.0%
! TTTCTATGGCTTATACAATA+GGG - chr2_4:983015-983034 None:intergenic 25.0%
!! TTTTCTATGGCTTATACAAT+AGG - chr2_4:983016-983035 None:intergenic 25.0%
! TTTCAGTTATGCTAAAAGTA+AGG - chr2_4:983162-983181 None:intergenic 25.0%
!! TAATCGTAATCCGAAATTTT+GGG - chr2_4:983324-983343 None:intergenic 25.0%
!! ATAATCGTAATCCGAAATTT+TGG - chr2_4:983325-983344 None:intergenic 25.0%
! TAAAGGCTCATACTTTATAT+TGG + chr2_4:983370-983389 Msa0307850:intron 25.0%
! CTTTAATTATCTTTCAGGAA+AGG + chr2_4:983482-983501 Msa0307850:intron 25.0%
! AAGCTGTAATACTGAATAAA+TGG - chr2_4:984484-984503 None:intergenic 25.0%
!! GAATATTGTTTTCTGTCTTT+CGG + chr2_4:984519-984538 Msa0307850:intron 25.0%
! ACAAAAAACATTGGGAATTT+GGG - chr2_4:984652-984671 None:intergenic 25.0%
! AACAAAAAACATTGGGAATT+TGG - chr2_4:984653-984672 None:intergenic 25.0%
! TTGGAACAACAAAAAACATT+GGG - chr2_4:984660-984679 None:intergenic 25.0%
! ATTGGAACAACAAAAAACAT+TGG - chr2_4:984661-984680 None:intergenic 25.0%
! CCAAAAATCAGAATAAAGAT+TGG - chr2_4:984679-984698 None:intergenic 25.0%
!! CCAATCTTTATTCTGATTTT+TGG + chr2_4:984676-984695 Msa0307850:three_prime_UTR 25.0%
!!! ATCTTTATTCTGATTTTTGG+CGG + chr2_4:984679-984698 Msa0307850:three_prime_UTR 25.0%
TACAAAATCGGGAAAGATAT+AGG - chr2_4:980372-980391 None:intergenic 30.0%
!! GCTAATCTGTTGTTGATTTA+GGG + chr2_4:980398-980417 Msa0307850:five_prime_UTR 30.0%
AAAGTCGAGAATTAAGGTTA+TGG - chr2_4:980477-980496 None:intergenic 30.0%
AACAACAAAGTCGAGAATTA+AGG - chr2_4:980483-980502 None:intergenic 30.0%
!! TAGTATTTGCTTTTACCGTT+TGG - chr2_4:980819-980838 None:intergenic 30.0%
AAAAGCAAATACTACGTTGA+TGG + chr2_4:980825-980844 Msa0307850:CDS 30.0%
! GTAAAGATTAGGGATCTTTT+GGG - chr2_4:981045-981064 None:intergenic 30.0%
! TGTAAAGATTAGGGATCTTT+TGG - chr2_4:981046-981065 None:intergenic 30.0%
!!! TTTTTGCTTCATTGAGTTGA+AGG - chr2_4:981159-981178 None:intergenic 30.0%
AGGACTTGATTATCAAATGT+AGG + chr2_4:981204-981223 Msa0307850:CDS 30.0%
GGACTTGATTATCAAATGTA+GGG + chr2_4:981205-981224 Msa0307850:CDS 30.0%
! TTTAGCAACTTTTGTTAGGA+AGG - chr2_4:981564-981583 None:intergenic 30.0%
!!! GTGTTTTAGCAACTTTTGTT+AGG - chr2_4:981568-981587 None:intergenic 30.0%
!!! GCATTTTTTCCACACATTTA+TGG - chr2_4:981669-981688 None:intergenic 30.0%
GAATCATCAACCTTTATGTT+TGG - chr2_4:981734-981753 None:intergenic 30.0%
GATGAGAATGAAACTAAGAA+AGG + chr2_4:981764-981783 Msa0307850:CDS 30.0%
TGAGAATGAAACTAAGAAAG+GGG + chr2_4:981766-981785 Msa0307850:CDS 30.0%
AGATTTCAAAGCTTCTTCTA+AGG + chr2_4:981976-981995 Msa0307850:CDS 30.0%
TTATGAAGCAACGAGAAAAT+TGG + chr2_4:982045-982064 Msa0307850:CDS 30.0%
TGATACTAACACATCCATTA+AGG - chr2_4:982209-982228 None:intergenic 30.0%
TGTTTGTCTGAACTTTATTC+TGG + chr2_4:982459-982478 Msa0307850:CDS 30.0%
ATCTTTACATTGACATTGAG+TGG + chr2_4:982774-982793 Msa0307850:intron 30.0%
TCTTTACATTGACATTGAGT+GGG + chr2_4:982775-982794 Msa0307850:intron 30.0%
! TATTTTCATCTTGTTACTGG+GGG + chr2_4:982949-982968 Msa0307850:intron 30.0%
!! TATTTTTGCCATTGGTAGTT+CGG + chr2_4:983118-983137 Msa0307850:intron 30.0%
TAGCATAACTGAAATTGATG+AGG + chr2_4:983168-983187 Msa0307850:intron 30.0%
AGCATAACTGAAATTGATGA+GGG + chr2_4:983169-983188 Msa0307850:intron 30.0%
ATGTTCAAACCCCAAAATTT+CGG + chr2_4:983311-983330 Msa0307850:intron 30.0%
! AATCGTAATCCGAAATTTTG+GGG - chr2_4:983323-983342 None:intergenic 30.0%
GTGAATACCACAAACAATAA+AGG + chr2_4:983353-983372 Msa0307850:intron 30.0%
!! GGATTTTTGGAAATCCTAAT+CGG + chr2_4:983391-983410 Msa0307850:intron 30.0%
AATTATCTTTCAGGAAAGGT+TGG + chr2_4:983486-983505 Msa0307850:intron 30.0%
TATTAATGGAGATTTCCAGA+AGG + chr2_4:983744-983763 Msa0307850:CDS 30.0%
AAGAGATGCAATAATGTCAA+AGG - chr2_4:983770-983789 None:intergenic 30.0%
ATGATGAAGAGAAGGTAAAT+AGG - chr2_4:983876-983895 None:intergenic 30.0%
AGAATCATATGATGAAGAGA+AGG - chr2_4:983884-983903 None:intergenic 30.0%
TAGATAATTTCTCAGTCAAC+TGG - chr2_4:984074-984093 None:intergenic 30.0%
TATGCACTTAATCTAGATTC+TGG + chr2_4:984560-984579 Msa0307850:three_prime_UTR 30.0%
CAAAAAACATTGGGAATTTG+GGG - chr2_4:984651-984670 None:intergenic 30.0%
!! GGCTAATCTGTTGTTGATTT+AGG + chr2_4:980397-980416 Msa0307850:five_prime_UTR 35.0%
GTAAAAGAATCTGGAAGTCA+TGG - chr2_4:980617-980636 None:intergenic 35.0%
AGATACCTGGTAAAAGAATC+TGG - chr2_4:980626-980645 None:intergenic 35.0%
GAGTAAGAAATGAAGATACC+TGG - chr2_4:980639-980658 None:intergenic 35.0%
! GTTCTTTTCTATTGTTAGGG+TGG + chr2_4:980717-980736 Msa0307850:intron 35.0%
GGTTCATCATCAATATCAGT+GGG - chr2_4:980768-980787 None:intergenic 35.0%
AGGTTCATCATCAATATCAG+TGG - chr2_4:980769-980788 None:intergenic 35.0%
!! TTTGCTTTTACCGTTTGGAT+CGG - chr2_4:980814-980833 None:intergenic 35.0%
! CAGATTTAACAACACGCTTT+TGG - chr2_4:980881-980900 None:intergenic 35.0%
!! AGATAAGCGTTTTGATGAGA+TGG + chr2_4:980905-980924 Msa0307850:CDS 35.0%
ATTCTTGATCTGATCAACAG+TGG - chr2_4:980934-980953 None:intergenic 35.0%
ATGCTATCAAGATCAATGAC+TGG + chr2_4:980952-980971 Msa0307850:CDS 35.0%
TGCTATCAAGATCAATGACT+GGG + chr2_4:980953-980972 Msa0307850:CDS 35.0%
GATCCCTAATCTTTACATCA+AGG + chr2_4:981049-981068 Msa0307850:CDS 35.0%
GAGCCTTGATGTAAAGATTA+GGG - chr2_4:981055-981074 None:intergenic 35.0%
AGAGCCTTGATGTAAAGATT+AGG - chr2_4:981056-981075 None:intergenic 35.0%
GAAGAACAATAAGCAATACG+AGG + chr2_4:981184-981203 Msa0307850:CDS 35.0%
AGGTTCAATGATCTCATCAT+CGG - chr2_4:981291-981310 None:intergenic 35.0%
AAAAGCTTAGCAAGAAAGAC+AGG + chr2_4:981408-981427 Msa0307850:CDS 35.0%
CAAGAAGTTCAAAGAGATTC+TGG + chr2_4:981487-981506 Msa0307850:CDS 35.0%
!! CATAAAGGTTGATGATTCTG+TGG + chr2_4:981736-981755 Msa0307850:CDS 35.0%
TGAATATGTTGAGAGACTCA+GGG + chr2_4:981895-981914 Msa0307850:CDS 35.0%
CAATGCTTTCAAGATATTCC+TGG - chr2_4:981955-981974 None:intergenic 35.0%
! CAGGAATATCTTGAAAGCAT+TGG + chr2_4:981953-981972 Msa0307850:CDS 35.0%
! TGAGGAGTTAAAAGGTTTTG+AGG + chr2_4:982105-982124 Msa0307850:CDS 35.0%
!!! ATTAAGGTCCTGCTATTTTC+CGG - chr2_4:982193-982212 None:intergenic 35.0%
! AGTTAGGTCTATGTGCTTTT+CGG + chr2_4:982409-982428 Msa0307850:CDS 35.0%
TTGTCTGAACTTTATTCTGG+TGG + chr2_4:982462-982481 Msa0307850:CDS 35.0%
! CTGGAGTCTTTTCATGATAA+CGG - chr2_4:982527-982546 None:intergenic 35.0%
CAAATAGATGTCTCATAGCA+TGG + chr2_4:982576-982595 Msa0307850:intron 35.0%
ATCAGATACAATGTAAGCAC+CGG - chr2_4:982636-982655 None:intergenic 35.0%
!! TTTCTTTAGAGCAGTGACAT+TGG - chr2_4:982684-982703 None:intergenic 35.0%
CTTTACATTGACATTGAGTG+GGG + chr2_4:982776-982795 Msa0307850:intron 35.0%
! GTGGGGATTAATCAATTTTG+AGG + chr2_4:982793-982812 Msa0307850:intron 35.0%
TGTTAAACTCATAGAGCATG+AGG + chr2_4:983053-983072 Msa0307850:intron 35.0%
GTTAAACTCATAGAGCATGA+GGG + chr2_4:983054-983073 Msa0307850:intron 35.0%
TTAAACTCATAGAGCATGAG+GGG + chr2_4:983055-983074 Msa0307850:intron 35.0%
AAAAGTAAGGCACACTTTGT+TGG - chr2_4:983149-983168 None:intergenic 35.0%
! CATGCTCTTATTTCACTACA+TGG - chr2_4:983219-983238 None:intergenic 35.0%
! TCACAGAAAGTTTTCTGTCT+TGG + chr2_4:983287-983306 Msa0307850:intron 35.0%
GTATGAGCCTTTATTGTTTG+TGG - chr2_4:983363-983382 None:intergenic 35.0%
! TTTGCCGTATTTCTATCTAC+CGG + chr2_4:983419-983438 Msa0307850:intron 35.0%
CAGTGAGAAACAAACATTCA+CGG + chr2_4:983672-983691 Msa0307850:CDS 35.0%
AGTGAGAAACAAACATTCAC+GGG + chr2_4:983673-983692 Msa0307850:CDS 35.0%
TCCATTAATAAGAACCCTTG+TGG - chr2_4:983734-983753 None:intergenic 35.0%
TTATTGCATCTCTTGATGTG+TGG + chr2_4:983776-983795 Msa0307850:CDS 35.0%
AATGCTGAAGGACAAAATCA+AGG + chr2_4:983831-983850 Msa0307850:CDS 35.0%
ATCATATGATTCTTTGAGCG+TGG + chr2_4:983891-983910 Msa0307850:CDS 35.0%
GTGTTCATAGTATTGTCAGT+AGG + chr2_4:983950-983969 Msa0307850:CDS 35.0%
ACTTGTCCTATTCTCAAACA+AGG + chr2_4:984241-984260 Msa0307850:CDS 35.0%
ATTAGCCGCTGCTACAAAAT+CGG - chr2_4:980384-980403 None:intergenic 40.0%
TTGTCTTGTCTTGTCTTGTC+TGG - chr2_4:980442-980461 None:intergenic 40.0%
ACAAGACAAGACAAGACAAG+AGG + chr2_4:980443-980462 Msa0307850:five_prime_UTR 40.0%
AAGAATCTGGAAGTCATGGT+AGG - chr2_4:980613-980632 None:intergenic 40.0%
! GACTTCCAGATTCTTTTACC+AGG + chr2_4:980618-980637 Msa0307850:CDS 40.0%
! AATATCAGTGGGTTCATCGT+CGG - chr2_4:980757-980776 None:intergenic 40.0%
! TTTTACCGTTTGGATCGGTT+GGG - chr2_4:980809-980828 None:intergenic 40.0%
!! CTTCATTGAGTTGAAGGCTT+TGG - chr2_4:981153-981172 None:intergenic 40.0%
AGAAGTTTCAGAATCCGACA+CGG - chr2_4:981336-981355 None:intergenic 40.0%
!! GATTCTGAAACTTCTGAGCT+TGG + chr2_4:981341-981360 Msa0307850:CDS 40.0%
! TTGCTAAGCTTTTGATCCCA+AGG - chr2_4:981401-981420 None:intergenic 40.0%
! TAGCAAGAAAGACAGGCTTT+TGG + chr2_4:981415-981434 Msa0307850:CDS 40.0%
AAAAGCCTAGTGAGATCACA+TGG + chr2_4:981453-981472 Msa0307850:CDS 40.0%
AAAGCCTAGTGAGATCACAT+GGG + chr2_4:981454-981473 Msa0307850:CDS 40.0%
GCTCAGTTTGATGTTAATCC+AGG + chr2_4:981626-981645 Msa0307850:CDS 40.0%
AAAATGCGTGCAGAATATGC+TGG + chr2_4:981682-981701 Msa0307850:CDS 40.0%
AAGAAAGGGGATGACTATGA+CGG + chr2_4:981779-981798 Msa0307850:CDS 40.0%
CTGCAAGCTCTTGAAAAACT+CGG - chr2_4:981855-981874 None:intergenic 40.0%
TCAACATATTCACGTGTGTG+GGG - chr2_4:981887-981906 None:intergenic 40.0%
CTCAACATATTCACGTGTGT+GGG - chr2_4:981888-981907 None:intergenic 40.0%
TCTCAACATATTCACGTGTG+TGG - chr2_4:981889-981908 None:intergenic 40.0%
GTGAATATGTTGAGAGACTC+AGG + chr2_4:981894-981913 Msa0307850:CDS 40.0%
TGTGCAAGAACAACAAACTG+AGG - chr2_4:981926-981945 None:intergenic 40.0%
!! TTCTAAGGTAGCCTTGAAGA+GGG + chr2_4:981991-982010 Msa0307850:CDS 40.0%
AATGAGTTCAACCCTCTTCA+AGG - chr2_4:982005-982024 None:intergenic 40.0%
CATTTACTACAAACCGCATG+AGG + chr2_4:982021-982040 Msa0307850:CDS 40.0%
GTTGCTTCATAAACCTCATG+CGG - chr2_4:982037-982056 None:intergenic 40.0%
!! AGATAATGGAGAGATGAGTG+AGG + chr2_4:982087-982106 Msa0307850:CDS 40.0%
GAGATGAGTGAGGAGTTAAA+AGG + chr2_4:982097-982116 Msa0307850:CDS 40.0%
!!! TTAAGGTCCTGCTATTTTCC+GGG - chr2_4:982192-982211 None:intergenic 40.0%
GGAAAATAGCAGGACCTTAA+TGG + chr2_4:982192-982211 Msa0307850:CDS 40.0%
CAAACTCATCAAGAAGAGCA+TGG - chr2_4:982294-982313 None:intergenic 40.0%
ACTCATAAGCAACAGATCAC+GGG - chr2_4:982323-982342 None:intergenic 40.0%
GACTCATAAGCAACAGATCA+CGG - chr2_4:982324-982343 None:intergenic 40.0%
GCAAGAAAATGTTCACCACA+TGG + chr2_4:982348-982367 Msa0307850:intron 40.0%
TTTGTGTCGAAATGTCCATG+TGG - chr2_4:982366-982385 None:intergenic 40.0%
! GTTAGGTCTATGTGCTTTTC+GGG + chr2_4:982410-982429 Msa0307850:CDS 40.0%
CTGAACTTTATTCTGGTGGA+CGG + chr2_4:982466-982485 Msa0307850:CDS 40.0%
! TGAACTTTATTCTGGTGGAC+GGG + chr2_4:982467-982486 Msa0307850:CDS 40.0%
TCATGAAAAGACTCCAGAAC+AGG + chr2_4:982530-982549 Msa0307850:CDS 40.0%
GAATTGAGTGGGGTAAGAAA+AGG - chr2_4:983089-983108 None:intergenic 40.0%
! TTGCCGTATTTCTATCTACC+GGG + chr2_4:983420-983439 Msa0307850:intron 40.0%
TGACCCGGTAGATAGAAATA+CGG - chr2_4:983426-983445 None:intergenic 40.0%
AGGAAAGGTTGGAAAGAAGA+CGG + chr2_4:983497-983516 Msa0307850:intron 40.0%
GCATATAAATCTTGAGCTCC+TGG + chr2_4:983537-983556 Msa0307850:CDS 40.0%
!! ATGTAAGATGCACTGATTCC+AGG - chr2_4:983558-983577 None:intergenic 40.0%
ACGCTTTGCATCATGAACAT+TGG - chr2_4:983614-983633 None:intergenic 40.0%
AACTGTCAGGGATCATGTTA+TGG + chr2_4:983705-983724 Msa0307850:CDS 40.0%
GCCACAAGGGTTCTTATTAA+TGG + chr2_4:983730-983749 Msa0307850:CDS 40.0%
CAATAATGTCAAAGGCCTTC+TGG - chr2_4:983762-983781 None:intergenic 40.0%
GAAGGACAAAATCAAGGAAG+AGG + chr2_4:983837-983856 Msa0307850:CDS 40.0%
CTGACAATACTATGAACACG+AGG - chr2_4:983949-983968 None:intergenic 40.0%
CAGTAGGATGATGATCAATG+AGG + chr2_4:983966-983985 Msa0307850:CDS 40.0%
TCCGAAATGTTGAACACTCA+AGG + chr2_4:984031-984050 Msa0307850:CDS 40.0%
CCCTTGAGTGTTCAACATTT+CGG - chr2_4:984035-984054 None:intergenic 40.0%
CCGAAATGTTGAACACTCAA+GGG + chr2_4:984032-984051 Msa0307850:CDS 40.0%
ATGAAAGAGCTACAGAAGCA+AGG + chr2_4:984109-984128 Msa0307850:CDS 40.0%
TCCTATTCTCAAACAAGGCA+AGG + chr2_4:984246-984265 Msa0307850:CDS 40.0%
AACATTGGGAATTTGGGGAA+GGG - chr2_4:984646-984665 None:intergenic 40.0%
AAACATTGGGAATTTGGGGA+AGG - chr2_4:984647-984666 None:intergenic 40.0%
! CTTTCCCGATTTTGTAGCAG+CGG + chr2_4:980376-980395 Msa0307850:five_prime_UTR 45.0%
TTAGCCGCTGCTACAAAATC+GGG - chr2_4:980383-980402 None:intergenic 45.0%
GTCTTGTCTTGTCTGGAAGA+TGG - chr2_4:980435-980454 None:intergenic 45.0%
TTTACCGTTTGGATCGGTTG+GGG - chr2_4:980808-980827 None:intergenic 45.0%
! CTTTTACCGTTTGGATCGGT+TGG - chr2_4:980810-980829 None:intergenic 45.0%
GATGACAGTGACGATGATGA+TGG + chr2_4:980855-980874 Msa0307850:CDS 45.0%
GCTTGAAGATTTCCTTGCTC+AGG + chr2_4:981082-981101 Msa0307850:CDS 45.0%
TATTAGCAGAAGCCTGAGCA+AGG - chr2_4:981097-981116 None:intergenic 45.0%
TGCTCAGGCTTCTGCTAATA+AGG + chr2_4:981097-981116 Msa0307850:CDS 45.0%
! TTGAAGGCTTTGGCATTGCT+GGG - chr2_4:981143-981162 None:intergenic 45.0%
TCATTGAACCTGATCAGCTC+AGG + chr2_4:981300-981319 Msa0307850:CDS 45.0%
GAAGTTTCAGAATCCGACAC+GGG - chr2_4:981335-981354 None:intergenic 45.0%
!! CTTCTGAGCTTGGTAATGAC+AGG + chr2_4:981351-981370 Msa0307850:CDS 45.0%
! TCAAAGAGATTCTGGAAGCC+AGG + chr2_4:981495-981514 Msa0307850:CDS 45.0%
! CAAAGAGATTCTGGAAGCCA+GGG + chr2_4:981496-981515 Msa0307850:CDS 45.0%
! AAAGAGATTCTGGAAGCCAG+GGG + chr2_4:981497-981516 Msa0307850:CDS 45.0%
! GCTGCAGATTCTTTTCAGTG+TGG + chr2_4:981598-981617 Msa0307850:CDS 45.0%
ATGTTAATCCAGGCCTCAGT+GGG + chr2_4:981636-981655 Msa0307850:CDS 45.0%
GGCATATGCCCATAAATGTG+TGG + chr2_4:981657-981676 Msa0307850:CDS 45.0%
AAGTTGCCCCAGACATGAAT+GGG - chr2_4:981806-981825 None:intergenic 45.0%
TAAGTTGCCCCAGACATGAA+TGG - chr2_4:981807-981826 None:intergenic 45.0%
TGTTCTTGCACAGAATGTCC+AGG + chr2_4:981934-981953 Msa0307850:CDS 45.0%
!! CTTCTAAGGTAGCCTTGAAG+AGG + chr2_4:981990-982009 Msa0307850:CDS 45.0%
ATGACCGTAGAGGGAGATAA+TGG + chr2_4:982073-982092 Msa0307850:CDS 45.0%
CTCTCCATTATCTCCCTCTA+CGG - chr2_4:982080-982099 None:intergenic 45.0%
AGTTCCGGGGTAACAACAAA+CGG - chr2_4:982148-982167 None:intergenic 45.0%
AACAGGGCTATGTCACAGTT+AGG + chr2_4:982393-982412 Msa0307850:intron 45.0%
!!! GTCTATGTGCTTTTCGGGTT+GGG + chr2_4:982415-982434 Msa0307850:CDS 45.0%
CCAGAACAGGTACTAAATCC+CGG + chr2_4:982543-982562 Msa0307850:intron 45.0%
TGTTGTGGTCAAGTGCATAC+CGG + chr2_4:982614-982633 Msa0307850:intron 45.0%
TTTCATCTTGTTACTGGGGG+AGG + chr2_4:982952-982971 Msa0307850:intron 45.0%
TTCATCTTGTTACTGGGGGA+GGG + chr2_4:982953-982972 Msa0307850:intron 45.0%
! TTGCCATTGGTAGTTCGGTT+TGG + chr2_4:983123-983142 Msa0307850:intron 45.0%
! TACGGCAAAAGTTGCCGATT+AGG - chr2_4:983408-983427 None:intergenic 45.0%
GATTAAACCCTCACATGACC+CGG - chr2_4:983441-983460 None:intergenic 45.0%
TCTTACATCTGCTATGCTGC+TGG + chr2_4:983570-983589 Msa0307850:CDS 45.0%
ACATGATCCCTGACAGTTTC+AGG - chr2_4:983703-983722 None:intergenic 45.0%
ATCATGTTATGGCTGCCACA+AGG + chr2_4:983716-983735 Msa0307850:CDS 45.0%
TCATGTTATGGCTGCCACAA+GGG + chr2_4:983717-983736 Msa0307850:CDS 45.0%
!! GTCCTTCAGCATTTCTAGCA+CGG - chr2_4:983824-983843 None:intergenic 45.0%
!! AAATCAAGGAAGAGGCGCTT+AGG + chr2_4:983845-983864 Msa0307850:CDS 45.0%
CGGAAAATAATGCACCCAGT+TGG - chr2_4:984015-984034 None:intergenic 45.0%
AGAGCTACAGAAGCAAGGTT+AGG + chr2_4:984114-984133 Msa0307850:CDS 45.0%
!! GCCTTGCCTTGTTTGAGAAT+AGG - chr2_4:984250-984269 None:intergenic 45.0%
GCATTATCGTTCAGTCAAGC+TGG + chr2_4:984300-984319 Msa0307850:CDS 45.0%
TTATCGTTCAGTCAAGCTGG+TGG + chr2_4:984303-984322 Msa0307850:CDS 45.0%
TATCGTTCAGTCAAGCTGGT+GGG + chr2_4:984304-984323 Msa0307850:CDS 45.0%
! CTATTCTAGAGGACGAGGAA+CGG + chr2_4:984335-984354 Msa0307850:CDS 45.0%
! TATTCTAGAGGACGAGGAAC+GGG + chr2_4:984336-984355 Msa0307850:CDS 45.0%
AGAATTCAGGGAGGACTCAA+GGG + chr2_4:984373-984392 Msa0307850:CDS 45.0%
TCAAGGGGGTTCTACTTTGA+GGG + chr2_4:984389-984408 Msa0307850:CDS 45.0%
ACATTGGGAATTTGGGGAAG+GGG - chr2_4:984645-984664 None:intergenic 45.0%
GCTGGGACTCATCTTCTTCT+TGG - chr2_4:981126-981145 None:intergenic 50.0%
! GTTGAAGGCTTTGGCATTGC+TGG - chr2_4:981144-981163 None:intergenic 50.0%
GGAAAAGGATGACGAGGATG+AGG + chr2_4:981247-981266 Msa0307850:CDS 50.0%
!! TGATGATGGCGATGCTCCTT+GGG + chr2_4:981382-981401 Msa0307850:CDS 50.0%
GTGTCCCATGTGATCTCACT+AGG - chr2_4:981461-981480 None:intergenic 50.0%
GGGAACTGGAAGGTTTGAAC+AGG + chr2_4:981526-981545 Msa0307850:CDS 50.0%
AGAATCTGCAGCTTCTGAGC+AGG - chr2_4:981590-981609 None:intergenic 50.0%
GATGTTAATCCAGGCCTCAG+TGG + chr2_4:981635-981654 Msa0307850:CDS 50.0%
TTATGGGCATATGCCCACTG+AGG - chr2_4:981652-981671 None:intergenic 50.0%
CGTGCAGCACCCAAACATAA+AGG + chr2_4:981721-981740 Msa0307850:CDS 50.0%
!! ATGACGGACCCATTCATGTC+TGG + chr2_4:981795-981814 Msa0307850:CDS 50.0%
! TGACGGACCCATTCATGTCT+GGG + chr2_4:981796-981815 Msa0307850:CDS 50.0%
ATTGGCTGAGATGACCGTAG+AGG + chr2_4:982063-982082 Msa0307850:CDS 50.0%
TTGGCTGAGATGACCGTAGA+GGG + chr2_4:982064-982083 Msa0307850:CDS 50.0%
!! TGCTCCGTTTGTTGTTACCC+CGG + chr2_4:982141-982160 Msa0307850:CDS 50.0%
TGTTGTTACCCCGGAACTTG+TGG + chr2_4:982150-982169 Msa0307850:CDS 50.0%
!!! CTGCTATTTTCCGGGAAGGT+GGG - chr2_4:982184-982203 None:intergenic 50.0%
!!! GGTCTATGTGCTTTTCGGGT+TGG + chr2_4:982414-982433 Msa0307850:CDS 50.0%
! TTATTCTGGTGGACGGGTGA+AGG + chr2_4:982473-982492 Msa0307850:CDS 50.0%
GTGAAGGAATTGCTTGCGCA+AGG + chr2_4:982489-982508 Msa0307850:CDS 50.0%
CCGGGATTTAGTACCTGTTC+TGG - chr2_4:982546-982565 None:intergenic 50.0%
TCATCTTGTTACTGGGGGAG+GGG + chr2_4:982954-982973 Msa0307850:intron 50.0%
TGGCCAAACCGAACTACCAA+TGG - chr2_4:983129-983148 None:intergenic 50.0%
TCTATCTACCGGGTCATGTG+AGG + chr2_4:983430-983449 Msa0307850:intron 50.0%
CTATCTACCGGGTCATGTGA+GGG + chr2_4:983431-983450 Msa0307850:intron 50.0%
TACATCTGCTATGCTGCTGG+AGG + chr2_4:983573-983592 Msa0307850:CDS 50.0%
TGAACATTGGCCGCCATGTT+GGG - chr2_4:983601-983620 None:intergenic 50.0%
ATGAACATTGGCCGCCATGT+TGG - chr2_4:983602-983621 None:intergenic 50.0%
GAATTTCCGACGCTTGCTTG+AGG + chr2_4:983648-983667 Msa0307850:CDS 50.0%
TGATCCCTGACAGTTTCAGG+AGG - chr2_4:983700-983719 None:intergenic 50.0%
ATGAGGAGCTTCATGCAAGC+TGG + chr2_4:983983-984002 Msa0307850:CDS 50.0%
TGAGGAGCTTCATGCAAGCT+GGG + chr2_4:983984-984003 Msa0307850:CDS 50.0%
! TGTTGAACACTCAAGGGTGC+AGG + chr2_4:984038-984057 Msa0307850:CDS 50.0%
GCTACAGAAGCAAGGTTAGG+CGG + chr2_4:984117-984136 Msa0307850:CDS 50.0%
TCTCAAACAAGGCAAGGCAG+CGG + chr2_4:984252-984271 Msa0307850:CDS 50.0%
GAGGCGGCTATCAGAATTCA+GGG + chr2_4:984361-984380 Msa0307850:CDS 50.0%
CAGAATTCAGGGAGGACTCA+AGG + chr2_4:984372-984391 Msa0307850:CDS 50.0%
GAATTCAGGGAGGACTCAAG+GGG + chr2_4:984374-984393 Msa0307850:CDS 50.0%
AATTCAGGGAGGACTCAAGG+GGG + chr2_4:984375-984394 Msa0307850:CDS 50.0%
CTCAAGGGGGTTCTACTTTG+AGG + chr2_4:984388-984407 Msa0307850:CDS 50.0%
CAAGGGGGTTCTACTTTGAG+GGG + chr2_4:984390-984409 Msa0307850:CDS 50.0%
!! TACCCGCATGGTTAGCCTTA+GGG + chr2_4:984431-984450 Msa0307850:CDS 50.0%
CATTGGGAATTTGGGGAAGG+GGG - chr2_4:984644-984663 None:intergenic 50.0%
GGGGCAGGTTCAGTATCACT+AGG - chr2_4:980789-980808 None:intergenic 55.0%
TAGGGAGAGTCCTGAGAGTG+AGG + chr2_4:981223-981242 Msa0307850:CDS 55.0%
AGGGAGAGTCCTGAGAGTGA+GGG + chr2_4:981224-981243 Msa0307850:CDS 55.0%
TCCTGAGAGTGAGGGGGAAA+AGG + chr2_4:981232-981251 Msa0307850:CDS 55.0%
! TCCTTTTCCCCCTCACTCTC+AGG - chr2_4:981236-981255 None:intergenic 55.0%
TGAGGGGGAAAAGGATGACG+AGG + chr2_4:981241-981260 Msa0307850:CDS 55.0%
ACCTGATCAGCTCAGGAAGC+CGG + chr2_4:981307-981326 Msa0307850:CDS 55.0%
!! CTTGGTAATGACAGGCCTCC+TGG + chr2_4:981359-981378 Msa0307850:CDS 55.0%
!! GTGATGATGGCGATGCTCCT+TGG + chr2_4:981381-981400 Msa0307850:CDS 55.0%
GACGGACCCATTCATGTCTG+GGG + chr2_4:981797-981816 Msa0307850:CDS 55.0%
GGGGTAACAACAAACGGAGC+AGG - chr2_4:982142-982161 None:intergenic 55.0%
!!! CCTGCTATTTTCCGGGAAGG+TGG - chr2_4:982185-982204 None:intergenic 55.0%
CCACCTTCCCGGAAAATAGC+AGG + chr2_4:982182-982201 Msa0307850:CDS 55.0%
!!! GGTCCTGCTATTTTCCGGGA+AGG - chr2_4:982188-982207 None:intergenic 55.0%
!!! ATGTGCTTTTCGGGTTGGGC+TGG + chr2_4:982419-982438 Msa0307850:CDS 55.0%
ATAGAGCATGAGGGGAAGCG+TGG + chr2_4:983063-983082 Msa0307850:intron 55.0%
CACTGACCTCAAGCAAGCGT+CGG - chr2_4:983657-983676 None:intergenic 55.0%
GGGTCCTCCTGAAACTGTCA+GGG + chr2_4:983693-983712 Msa0307850:CDS 55.0%
CGCCGTGCTAGAAATGCTGA+AGG + chr2_4:983819-983838 Msa0307850:CDS 55.0%
CAAGCTGGGATCAGCCAACT+GGG + chr2_4:983998-984017 Msa0307850:CDS 55.0%
! ACACTCAAGGGTGCAGGCTT+TGG + chr2_4:984044-984063 Msa0307850:CDS 55.0%
ACAGAAGCAAGGTTAGGCGG+CGG + chr2_4:984120-984139 Msa0307850:CDS 55.0%
TGCCTCCAAGGCGAAGAGAT+GGG + chr2_4:984154-984173 Msa0307850:CDS 55.0%
!! GGTGGTAGTGGAACGTCTTC+AGG + chr2_4:984204-984223 Msa0307850:CDS 55.0%
!! GGTAGTGGAACGTCTTCAGG+TGG + chr2_4:984207-984226 Msa0307850:CDS 55.0%
TACGGGATACGGTGGAGGAA+GGG + chr2_4:984278-984297 Msa0307850:CDS 55.0%
TTCAGTCAAGCTGGTGGGAG+TGG + chr2_4:984309-984328 Msa0307850:CDS 55.0%
GGAGGCGGCTATCAGAATTC+AGG + chr2_4:984360-984379 Msa0307850:CDS 55.0%
GCGGCTATCAGAATTCAGGG+AGG + chr2_4:984364-984383 Msa0307850:CDS 55.0%
! TCTACTTTGAGGGGACCCCA+CGG + chr2_4:984399-984418 Msa0307850:CDS 55.0%
!! CGGGTAGAAGTATCTCCGTG+GGG - chr2_4:984417-984436 None:intergenic 55.0%
!! GCGGGTAGAAGTATCTCCGT+GGG - chr2_4:984418-984437 None:intergenic 55.0%
!! TGCGGGTAGAAGTATCTCCG+TGG - chr2_4:984419-984438 None:intergenic 55.0%
CGGAGATACTTCTACCCGCA+TGG + chr2_4:984419-984438 Msa0307850:CDS 55.0%
!! CTACCCGCATGGTTAGCCTT+AGG + chr2_4:984430-984449 Msa0307850:CDS 55.0%
!! ACCCGCATGGTTAGCCTTAG+GGG + chr2_4:984432-984451 Msa0307850:CDS 55.0%
TCCCCTAAGGCTAACCATGC+GGG - chr2_4:984436-984455 None:intergenic 55.0%
CTCCCCTAAGGCTAACCATG+CGG - chr2_4:984437-984456 None:intergenic 55.0%
GTCAAGCACGAACTCCCCTA+AGG - chr2_4:984449-984468 None:intergenic 55.0%
CCTGCCCCAACCGATCCAAA+CGG + chr2_4:980801-980820 Msa0307850:CDS 60.0%
GGGAGAGTCCTGAGAGTGAG+GGG + chr2_4:981225-981244 Msa0307850:CDS 60.0%
GGAGAGTCCTGAGAGTGAGG+GGG + chr2_4:981226-981245 Msa0307850:CDS 60.0%
TCCGGCTTCCTGAGCTGATC+AGG - chr2_4:981311-981330 None:intergenic 60.0%
TCAGAATCCGACACGGGCTC+CGG - chr2_4:981329-981348 None:intergenic 60.0%
! GACAGGCCTCCTGGTGATGA+TGG + chr2_4:981368-981387 Msa0307850:CDS 60.0%
GCATCGCCATCATCACCAGG+AGG - chr2_4:981377-981396 None:intergenic 60.0%
!! GGAGCATCGCCATCATCACC+AGG - chr2_4:981380-981399 None:intergenic 60.0%
! AGATTCTGGAAGCCAGGGGC+AGG + chr2_4:981501-981520 Msa0307850:CDS 60.0%
TTACCCCGGAACTTGTGGCG+CGG + chr2_4:982155-982174 Msa0307850:CDS 60.0%
TTTCCGCGCCACAAGTTCCG+GGG - chr2_4:982161-982180 None:intergenic 60.0%
GTTTCCGCGCCACAAGTTCC+GGG - chr2_4:982162-982181 None:intergenic 60.0%
GGTTTCCGCGCCACAAGTTC+CGG - chr2_4:982163-982182 None:intergenic 60.0%
!! GGGCTGGTTTCTGAAGCGCA+TGG + chr2_4:982435-982454 Msa0307850:CDS 60.0%
GCTGCTGGAGGTTCCCAACA+TGG + chr2_4:983585-983604 Msa0307850:CDS 60.0%
GCTGGAGGTTCCCAACATGG+CGG + chr2_4:983588-983607 Msa0307850:CDS 60.0%
CGGGTCCTCCTGAAACTGTC+AGG + chr2_4:983692-983711 Msa0307850:CDS 60.0%
GCAAGCTGGGATCAGCCAAC+TGG + chr2_4:983997-984016 Msa0307850:CDS 60.0%
AAGCAAGGTTAGGCGGCGGT+GGG + chr2_4:984124-984143 Msa0307850:CDS 60.0%
!! GTGGGTTGGATCTGCCTCCA+AGG + chr2_4:984142-984161 Msa0307850:CDS 60.0%
CTGCCTCCAAGGCGAAGAGA+TGG + chr2_4:984153-984172 Msa0307850:CDS 60.0%
TGCCCATCTCTTCGCCTTGG+AGG - chr2_4:984159-984178 None:intergenic 60.0%
TCCAAGGCGAAGAGATGGGC+AGG + chr2_4:984158-984177 Msa0307850:CDS 60.0%
TCCTGCCCATCTCTTCGCCT+TGG - chr2_4:984162-984181 None:intergenic 60.0%
GATTATGCCGCTGCAGCTGC+TGG + chr2_4:984180-984199 Msa0307850:CDS 60.0%
GTGGAACGTCTTCAGGTGGC+AGG + chr2_4:984211-984230 Msa0307850:CDS 60.0%
GAACGTCTTCAGGTGGCAGG+TGG + chr2_4:984214-984233 Msa0307850:CDS 60.0%
AAGGCAAGGCAGCGGACGTA+CGG + chr2_4:984260-984279 Msa0307850:CDS 60.0%
GTACGGGATACGGTGGAGGA+AGG + chr2_4:984277-984296 Msa0307850:CDS 60.0%
AGTCAAGCTGGTGGGAGTGG+CGG + chr2_4:984312-984331 Msa0307850:CDS 60.0%
GGGAGTGGCGGCTATTCTAG+AGG + chr2_4:984324-984343 Msa0307850:CDS 60.0%
! GGCGGCTATTCTAGAGGACG+AGG + chr2_4:984330-984349 Msa0307850:CDS 60.0%
TCTAGAGGACGAGGAACGGG+TGG + chr2_4:984339-984358 Msa0307850:CDS 60.0%
CCGTTTGGATCGGTTGGGGC+AGG - chr2_4:980804-980823 None:intergenic 65.0%
TCTGGAAGCCAGGGGCAGGA+AGG + chr2_4:981505-981524 Msa0307850:CDS 65.0%
CTGGAAGCCAGGGGCAGGAA+GGG + chr2_4:981506-981525 Msa0307850:CDS 65.0%
TCCAGTTCCCTTCCTGCCCC+TGG - chr2_4:981516-981535 None:intergenic 65.0%
GGGGCAGGAAGGGAACTGGA+AGG + chr2_4:981516-981535 Msa0307850:CDS 65.0%
GGCATATGCCCACTGAGGCC+TGG - chr2_4:981647-981666 None:intergenic 65.0%
GAAGCAAGGTTAGGCGGCGG+TGG + chr2_4:984123-984142 Msa0307850:CDS 65.0%
AAGGTTAGGCGGCGGTGGGT+TGG + chr2_4:984128-984147 Msa0307850:CDS 65.0%
TATGCCGCTGCAGCTGCTGG+TGG + chr2_4:984183-984202 Msa0307850:CDS 65.0%
ACCACCACCAGCAGCTGCAG+CGG - chr2_4:984190-984209 None:intergenic 65.0%
!! GCAGCTGCTGGTGGTGGTAG+TGG + chr2_4:984192-984211 Msa0307850:CDS 65.0%
AGGCAAGGCAGCGGACGTAC+GGG + chr2_4:984261-984280 Msa0307850:CDS 65.0%
GGCAGCGGACGTACGGGATA+CGG + chr2_4:984267-984286 Msa0307850:CDS 65.0%
AGCGGACGTACGGGATACGG+TGG + chr2_4:984270-984289 Msa0307850:CDS 65.0%
GGACGTACGGGATACGGTGG+AGG + chr2_4:984273-984292 Msa0307850:CDS 65.0%
AGAGGACGAGGAACGGGTGG+AGG + chr2_4:984342-984361 Msa0307850:CDS 65.0%
CAGGAAGCCGGAGCCCGTGT+CGG + chr2_4:981319-981338 Msa0307850:CDS 70.0%
GCCAGGGGCAGGAAGGGAAC+TGG + chr2_4:981512-981531 Msa0307850:CDS 70.0%
GGCGCGGAAACCCACCTTCC+CGG + chr2_4:982171-982190 Msa0307850:CDS 70.0%
GGACGAGGAACGGGTGGAGG+CGG + chr2_4:984345-984364 Msa0307850:CDS 70.0%
GCCGCTGCAGCTGCTGGTGG+TGG + chr2_4:984186-984205 Msa0307850:CDS 75.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 980356 984742 980356 ID=Msa0307850;Name=Msa0307850
chr2_4 mRNA 980356 984742 980356 ID=Msa0307850-mRNA-1;Parent=Msa0307850;Name=Msa0307850-mRNA-1;_AED=0.03;_eAED=0.03;_QI=117|0.8|0.66|1|0.6|0.5|6|249|913
chr2_4 exon 980356 980464 980356 ID=Msa0307850-mRNA-1:exon:333;Parent=Msa0307850-mRNA-1
chr2_4 exon 980608 980639 980608 ID=Msa0307850-mRNA-1:exon:334;Parent=Msa0307850-mRNA-1
chr2_4 exon 980735 982329 980735 ID=Msa0307850-mRNA-1:exon:335;Parent=Msa0307850-mRNA-1
chr2_4 exon 982398 982551 982398 ID=Msa0307850-mRNA-1:exon:336;Parent=Msa0307850-mRNA-1
chr2_4 exon 983499 984515 983499 ID=Msa0307850-mRNA-1:exon:337;Parent=Msa0307850-mRNA-1
chr2_4 exon 984542 984742 984542 ID=Msa0307850-mRNA-1:exon:338;Parent=Msa0307850-mRNA-1
chr2_4 five_prime_UTR 980356 980464 980356 ID=Msa0307850-mRNA-1:five_prime_utr;Parent=Msa0307850-mRNA-1
chr2_4 five_prime_UTR 980608 980615 980608 ID=Msa0307850-mRNA-1:five_prime_utr;Parent=Msa0307850-mRNA-1
chr2_4 CDS 980616 980639 980616 ID=Msa0307850-mRNA-1:cds;Parent=Msa0307850-mRNA-1
chr2_4 CDS 980735 982329 980735 ID=Msa0307850-mRNA-1:cds;Parent=Msa0307850-mRNA-1
chr2_4 CDS 982398 982551 982398 ID=Msa0307850-mRNA-1:cds;Parent=Msa0307850-mRNA-1
chr2_4 CDS 983499 984467 983499 ID=Msa0307850-mRNA-1:cds;Parent=Msa0307850-mRNA-1
chr2_4 three_prime_UTR 984468 984515 984468 ID=Msa0307850-mRNA-1:three_prime_utr;Parent=Msa0307850-mRNA-1
chr2_4 three_prime_UTR 984542 984742 984542 ID=Msa0307850-mRNA-1:three_prime_utr;Parent=Msa0307850-mRNA-1
Gene Sequence

>Msa0307850

ATGACTTCCAGATTCTTTTACCAGGGTGGTGATCATAGTGATACCGACGATGAACCCACTGATATTGATGATGAACCTAGTGATACTGAACCTGCCCCAACCGATCCAAACGGTAAAAGCAAATACTACGTTGATGGTAATGCTGATGACAGTGACGATGATGATGGCCAAAAGCGTGTTGTTAAATCTGCTAAAGATAAGCGTTTTGATGAGATGGCTTCCACTGTTGATCAGATCAAGAATGCTATCAAGATCAATGACTGGGTCAGCTTGCAAGAGAGCTTCGACAAGATCAACAAACAGCTCGAGAAAGTTATGCGTGTTATCGAGTCCCAAAAGATCCCTAATCTTTACATCAAGGCTCTTGTTATGCTTGAAGATTTCCTTGCTCAGGCTTCTGCTAATAAGGATGCCAAGAAGAAGATGAGTCCCAGCAATGCCAAAGCCTTCAACTCAATGAAGCAAAAATTGAAGAAGAACAATAAGCAATACGAGGACTTGATTATCAAATGTAGGGAGAGTCCTGAGAGTGAGGGGGAAAAGGATGACGAGGATGAGGACTCTGACGAATACGAGACCGATGATGAGATCATTGAACCTGATCAGCTCAGGAAGCCGGAGCCCGTGTCGGATTCTGAAACTTCTGAGCTTGGTAATGACAGGCCTCCTGGTGATGATGGCGATGCTCCTTGGGATCAAAAGCTTAGCAAGAAAGACAGGCTTTTGGAGAAAATGTTCATGAAAAAGCCTAGTGAGATCACATGGGACACTGTTAACAAGAAGTTCAAAGAGATTCTGGAAGCCAGGGGCAGGAAGGGAACTGGAAGGTTTGAACAGGTTGAGCAGCTTACCTTCCTAACAAAAGTTGCTAAAACACCTGCTCAGAAGCTGCAGATTCTTTTCAGTGTGGTTTCTGCTCAGTTTGATGTTAATCCAGGCCTCAGTGGGCATATGCCCATAAATGTGTGGAAAAAATGCGTGCAGAATATGCTGGTCATTCTTGATATTCTCGTGCAGCACCCAAACATAAAGGTTGATGATTCTGTGGAACTAGATGAGAATGAAACTAAGAAAGGGGATGACTATGACGGACCCATTCATGTCTGGGGCAACTTAGTTGCTTTCTTAGAAAAAATAGATGCCGAGTTTTTCAAGAGCTTGCAGTGCATTGATCCCCACACACGTGAATATGTTGAGAGACTCAGGGATGAGCCTCAGTTTGTTGTTCTTGCACAGAATGTCCAGGAATATCTTGAAAGCATTGGAGATTTCAAAGCTTCTTCTAAGGTAGCCTTGAAGAGGGTTGAACTCATTTACTACAAACCGCATGAGGTTTATGAAGCAACGAGAAAATTGGCTGAGATGACCGTAGAGGGAGATAATGGAGAGATGAGTGAGGAGTTAAAAGGTTTTGAGGATACAAGAATTCCTGCTCCGTTTGTTGTTACCCCGGAACTTGTGGCGCGGAAACCCACCTTCCCGGAAAATAGCAGGACCTTAATGGATGTGTTAGTATCACTGATATACAAATACGGAGATGAGCGCACTAAAGCACGTGCAATGCTTTGTGATATATATCACCATGCTCTTCTTGATGAGTTTGCAGTCGCCCGTGATCTGGCTATGTCACAGTTAGGTCTATGTGCTTTTCGGGTTGGGCTGGTTTCTGAAGCGCATGGCTGTTTGTCTGAACTTTATTCTGGTGGACGGGTGAAGGAATTGCTTGCGCAAGGAGTTTCACAGAGCCGTTATCATGAAAAGACTCCAGAACAGGAAAGGTTGGAAAGAAGACGGCAGATGCCATATCATATGCATATAAATCTTGAGCTCCTGGAATCAGTGCATCTTACATCTGCTATGCTGCTGGAGGTTCCCAACATGGCGGCCAATGTTCATGATGCAAAGCGTAAGATCATCAGTAAGAATTTCCGACGCTTGCTTGAGGTCAGTGAGAAACAAACATTCACGGGTCCTCCTGAAACTGTCAGGGATCATGTTATGGCTGCCACAAGGGTTCTTATTAATGGAGATTTCCAGAAGGCCTTTGACATTATTGCATCTCTTGATGTGTGGAAATTTGTGAAAAATCGAGACGCCGTGCTAGAAATGCTGAAGGACAAAATCAAGGAAGAGGCGCTTAGGACATACCTATTTACCTTCTCTTCATCATATGATTCTTTGAGCGTGGTTCAGCTCACAAATTTTTTCGATCTCTCTCTTCCTCGTGTTCATAGTATTGTCAGTAGGATGATGATCAATGAGGAGCTTCATGCAAGCTGGGATCAGCCAACTGGGTGCATTATTTTCCGAAATGTTGAACACTCAAGGGTGCAGGCTTTGGCATTCCAGTTGACTGAGAAATTATCTATTCTTGCAGAGAGTAATGAAAGAGCTACAGAAGCAAGGTTAGGCGGCGGTGGGTTGGATCTGCCTCCAAGGCGAAGAGATGGGCAGGATTATGCCGCTGCAGCTGCTGGTGGTGGTAGTGGAACGTCTTCAGGTGGCAGGTGGCAAGACTTGTCCTATTCTCAAACAAGGCAAGGCAGCGGACGTACGGGATACGGTGGAGGAAGGGCATTATCGTTCAGTCAAGCTGGTGGGAGTGGCGGCTATTCTAGAGGACGAGGAACGGGTGGAGGCGGCTATCAGAATTCAGGGAGGACTCAAGGGGGTTCTACTTTGAGGGGACCCCACGGAGATACTTCTACCCGCATGGTTAGCCTTAGGGGAGTTCGTGCTTGA
Protein sequence

>Msa0307850

MTSRFFYQGGDHSDTDDEPTDIDDEPSDTEPAPTDPNGKSKYYVDGNADDSDDDDGQKRVVKSAKDKRFDEMASTVDQIKNAIKINDWVSLQESFDKINKQLEKVMRVIESQKIPNLYIKALVMLEDFLAQASANKDAKKKMSPSNAKAFNSMKQKLKKNNKQYEDLIIKCRESPESEGEKDDEDEDSDEYETDDEIIEPDQLRKPEPVSDSETSELGNDRPPGDDGDAPWDQKLSKKDRLLEKMFMKKPSEITWDTVNKKFKEILEARGRKGTGRFEQVEQLTFLTKVAKTPAQKLQILFSVVSAQFDVNPGLSGHMPINVWKKCVQNMLVILDILVQHPNIKVDDSVELDENETKKGDDYDGPIHVWGNLVAFLEKIDAEFFKSLQCIDPHTREYVERLRDEPQFVVLAQNVQEYLESIGDFKASSKVALKRVELIYYKPHEVYEATRKLAEMTVEGDNGEMSEELKGFEDTRIPAPFVVTPELVARKPTFPENSRTLMDVLVSLIYKYGDERTKARAMLCDIYHHALLDEFAVARDLAMSQLGLCAFRVGLVSEAHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLESVHLTSAMLLEVPNMAANVHDAKRKIISKNFRRLLEVSEKQTFTGPPETVRDHVMAATRVLINGDFQKAFDIIASLDVWKFVKNRDAVLEMLKDKIKEEALRTYLFTFSSSYDSLSVVQLTNFFDLSLPRVHSIVSRMMINEELHASWDQPTGCIIFRNVEHSRVQALAFQLTEKLSILAESNERATEARLGGGGLDLPPRRRDGQDYAAAAAGGGSGTSSGGRWQDLSYSQTRQGSGRTGYGGGRALSFSQAGGSGGYSRGRGTGGGGYQNSGRTQGGSTLRGPHGDTSTRMVSLRGVRA*