Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0256510 | XP_013464726.1 | 88.847 | 529 | 35 | 3 | 1 | 505 | 1 | 529 | 0.0 | 966 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0256510 | sp|Q7XPY7|BGL14_ORYSJ | 52.600 | 500 | 203 | 7 | 10 | 482 | 6 | 498 | 0.0 | 526 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0256510 | A0A072VAX5 | 88.847 | 529 | 35 | 3 | 1 | 505 | 1 | 529 | 0.0 | 966 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0216310 | Msa0256510 | 0.859618 | 3.652290e-63 | -8.615850e-47 |
Msa0243080 | Msa0256510 | 0.804474 | 2.123639e-49 | -8.615850e-47 |
Msa0256510 | Msa0334350 | 0.847957 | 8.323916e-60 | -8.615850e-47 |
Msa0256510 | Msa0725250 | 0.808286 | 3.337209e-50 | -8.615850e-47 |
Msa0256510 | Msa0730270 | 0.815146 | 1.073313e-51 | -8.615850e-47 |
Msa0256510 | Msa0754680 | 0.842685 | 2.222959e-58 | -8.615850e-47 |
Msa0256510 | Msa0770580 | 0.820740 | 5.846168e-53 | -8.615850e-47 |
Msa0256510 | Msa0797350 | 0.846275 | 2.406228e-59 | -8.615850e-47 |
Msa0256510 | Msa0834860 | 0.822452 | 2.350952e-53 | -8.615850e-47 |
Msa0256510 | Msa0849330 | 0.828266 | 9.893271e-55 | -8.615850e-47 |
Msa0256510 | Msa1155560 | 0.812565 | 3.976480e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0256510 | MtrunA17_Chr2g0317841 | 88.847 | 529 | 35 | 3 | 1 | 505 | 1 | 529 | 0.0 | 966 |
Msa0256510 | MtrunA17_Chr2g0317821 | 85.472 | 530 | 52 | 4 | 1 | 505 | 1 | 530 | 0.0 | 932 |
Msa0256510 | MtrunA17_Chr4g0074551 | 48.960 | 529 | 229 | 7 | 10 | 503 | 31 | 553 | 2.02e-178 | 513 |
Msa0256510 | MtrunA17_Chr2g0288071 | 49.503 | 503 | 228 | 5 | 3 | 479 | 38 | 540 | 1.00e-173 | 500 |
Msa0256510 | MtrunA17_Chr2g0288021 | 49.213 | 508 | 231 | 5 | 8 | 488 | 9 | 516 | 6.93e-171 | 492 |
Msa0256510 | MtrunA17_Chr4g0074561 | 49.894 | 473 | 209 | 5 | 37 | 481 | 40 | 512 | 3.08e-164 | 475 |
Msa0256510 | MtrunA17_Chr4g0043091 | 44.800 | 500 | 240 | 7 | 10 | 479 | 8 | 501 | 1.20e-147 | 432 |
Msa0256510 | MtrunA17_Chr4g0033311 | 44.553 | 514 | 245 | 8 | 6 | 483 | 8 | 517 | 5.25e-143 | 421 |
Msa0256510 | MtrunA17_Chr6g0482071 | 43.141 | 503 | 247 | 9 | 12 | 479 | 13 | 511 | 4.46e-139 | 411 |
Msa0256510 | MtrunA17_Chr6g0482951 | 41.304 | 506 | 253 | 6 | 6 | 479 | 17 | 510 | 6.01e-139 | 410 |
Msa0256510 | MtrunA17_Chr6g0482941 | 42.147 | 503 | 253 | 6 | 6 | 479 | 17 | 510 | 1.92e-138 | 409 |
Msa0256510 | MtrunA17_Chr4g0042171 | 46.042 | 480 | 222 | 8 | 32 | 479 | 24 | 498 | 3.67e-138 | 408 |
Msa0256510 | MtrunA17_Chr6g0482081 | 42.315 | 501 | 258 | 6 | 10 | 479 | 11 | 511 | 9.91e-138 | 407 |
Msa0256510 | MtrunA17_Chr6g0482131 | 43.648 | 488 | 238 | 9 | 24 | 479 | 28 | 510 | 2.75e-137 | 406 |
Msa0256510 | MtrunA17_Chr3g0088441 | 43.687 | 499 | 245 | 8 | 16 | 483 | 23 | 516 | 1.16e-136 | 405 |
Msa0256510 | MtrunA17_Chr4g0033271 | 42.360 | 517 | 256 | 10 | 3 | 482 | 1 | 512 | 2.87e-136 | 403 |
Msa0256510 | MtrunA17_Chr3g0090131 | 43.943 | 487 | 233 | 8 | 31 | 490 | 20 | 493 | 5.74e-136 | 402 |
Msa0256510 | MtrunA17_Chr3g0090111 | 42.799 | 493 | 245 | 7 | 23 | 490 | 10 | 490 | 2.07e-135 | 400 |
Msa0256510 | MtrunA17_Chr2g0329191 | 42.062 | 485 | 237 | 7 | 30 | 479 | 32 | 507 | 2.30e-135 | 401 |
Msa0256510 | MtrunA17_Chr4g0033191 | 43.400 | 500 | 244 | 8 | 17 | 485 | 32 | 523 | 1.82e-134 | 399 |
Msa0256510 | MtrunA17_Chr2g0329201 | 42.063 | 504 | 250 | 8 | 7 | 479 | 13 | 505 | 4.53e-132 | 392 |
Msa0256510 | MtrunA17_Chr2g0329321 | 41.165 | 498 | 258 | 8 | 1 | 479 | 5 | 486 | 1.23e-131 | 390 |
Msa0256510 | MtrunA17_Chr4g0033201 | 42.323 | 508 | 254 | 9 | 10 | 482 | 10 | 513 | 1.71e-131 | 391 |
Msa0256510 | MtrunA17_Chr4g0033401 | 42.276 | 492 | 247 | 8 | 32 | 491 | 34 | 520 | 7.47e-131 | 390 |
Msa0256510 | MtrunA17_Chr7g0242691 | 42.171 | 479 | 248 | 7 | 32 | 488 | 31 | 502 | 1.17e-130 | 389 |
Msa0256510 | MtrunA17_Chr4g0006971 | 43.333 | 480 | 245 | 6 | 30 | 488 | 25 | 498 | 2.33e-130 | 389 |
Msa0256510 | MtrunA17_Chr4g0033331 | 43.542 | 480 | 234 | 9 | 32 | 479 | 39 | 513 | 2.97e-130 | 388 |
Msa0256510 | MtrunA17_Chr4g0033321 | 41.870 | 492 | 249 | 7 | 32 | 491 | 33 | 519 | 6.73e-130 | 387 |
Msa0256510 | MtrunA17_Chr4g0010501 | 42.050 | 478 | 238 | 8 | 32 | 479 | 24 | 492 | 8.85e-127 | 379 |
Msa0256510 | MtrunA17_Chr7g0242681 | 41.079 | 482 | 248 | 8 | 32 | 488 | 38 | 508 | 1.22e-125 | 377 |
Msa0256510 | MtrunA17_Chr3g0087261 | 40.625 | 480 | 246 | 7 | 31 | 479 | 36 | 507 | 7.07e-125 | 374 |
Msa0256510 | MtrunA17_Chr1g0195611 | 39.919 | 496 | 267 | 8 | 9 | 482 | 4 | 490 | 4.93e-124 | 372 |
Msa0256510 | MtrunA17_Chr5g0430451 | 42.917 | 480 | 220 | 8 | 32 | 479 | 39 | 496 | 1.21e-123 | 370 |
Msa0256510 | MtrunA17_Chr4g0033341 | 40.784 | 510 | 264 | 9 | 1 | 479 | 39 | 541 | 8.42e-123 | 370 |
Msa0256510 | MtrunA17_Chr3g0087271 | 40.583 | 515 | 263 | 8 | 1 | 479 | 1 | 508 | 1.50e-121 | 365 |
Msa0256510 | MtrunA17_Chr4g0033261 | 42.227 | 476 | 222 | 8 | 32 | 479 | 41 | 491 | 3.67e-119 | 359 |
Msa0256510 | MtrunA17_Chr5g0428831 | 39.034 | 497 | 271 | 9 | 9 | 482 | 4 | 491 | 7.36e-119 | 359 |
Msa0256510 | MtrunA17_Chr4g0033231 | 40.966 | 476 | 228 | 8 | 32 | 479 | 41 | 491 | 1.46e-117 | 355 |
Msa0256510 | MtrunA17_Chr4g0006131 | 39.078 | 499 | 238 | 10 | 22 | 482 | 32 | 502 | 2.90e-116 | 352 |
Msa0256510 | MtrunA17_Chr4g0006111 | 38.677 | 499 | 245 | 8 | 22 | 484 | 55 | 528 | 1.13e-113 | 346 |
Msa0256510 | MtrunA17_Chr5g0418871 | 48.299 | 294 | 139 | 3 | 53 | 333 | 4 | 297 | 7.62e-97 | 296 |
Msa0256510 | MtrunA17_Chr1g0195641 | 40.476 | 378 | 202 | 6 | 34 | 391 | 29 | 403 | 2.58e-93 | 290 |
Msa0256510 | MtrunA17_Chr7g0234091 | 36.975 | 476 | 253 | 9 | 33 | 480 | 76 | 532 | 3.47e-93 | 293 |
Msa0256510 | MtrunA17_Chr7g0234131 | 36.975 | 476 | 252 | 9 | 33 | 479 | 76 | 532 | 4.20e-92 | 290 |
Msa0256510 | MtrunA17_Chr2g0301231 | 39.329 | 417 | 190 | 7 | 99 | 479 | 1 | 390 | 8.95e-91 | 282 |
Msa0256510 | MtrunA17_Chr7g0234111 | 36.229 | 472 | 260 | 9 | 33 | 479 | 76 | 531 | 5.30e-89 | 282 |
Msa0256510 | MtrunA17_Chr3g0087201 | 39.104 | 335 | 183 | 6 | 160 | 480 | 16 | 343 | 4.81e-78 | 248 |
Msa0256510 | MtrunA17_Chr7g0230651 | 36.769 | 359 | 198 | 7 | 87 | 426 | 27 | 375 | 3.00e-68 | 224 |
Msa0256510 | MtrunA17_Chr7g0227561 | 38.976 | 254 | 134 | 4 | 34 | 285 | 48 | 282 | 1.88e-53 | 182 |
Msa0256510 | MtrunA17_Chr7g0236731 | 43.627 | 204 | 110 | 2 | 131 | 334 | 54 | 252 | 6.92e-51 | 175 |
Msa0256510 | MtrunA17_Chr3g0087191 | 44.379 | 169 | 73 | 3 | 6 | 159 | 2 | 164 | 1.11e-39 | 141 |
Msa0256510 | MtrunA17_Chr4g0068871 | 25.701 | 428 | 240 | 13 | 95 | 498 | 183 | 556 | 1.63e-24 | 107 |
Msa0256510 | MtrunA17_Chr5g0418861 | 50.000 | 84 | 40 | 2 | 399 | 480 | 8 | 91 | 2.67e-22 | 91.3 |
Msa0256510 | MtrunA17_Chr8g0352881 | 43.564 | 101 | 56 | 1 | 235 | 335 | 51 | 150 | 3.88e-21 | 90.1 |
Msa0256510 | MtrunA17_Chr8g0352881 | 33.117 | 154 | 70 | 7 | 41 | 190 | 7 | 131 | 5.03e-11 | 61.2 |
Msa0256510 | MtrunA17_Chr2g0288031 | 58.333 | 60 | 25 | 0 | 169 | 228 | 4 | 63 | 3.40e-19 | 81.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0256510 | AT1G61820.1 | 46.214 | 515 | 247 | 7 | 3 | 490 | 1 | 512 | 8.79e-165 | 476 |
Msa0256510 | AT1G61810.1 | 46.758 | 509 | 241 | 7 | 10 | 488 | 8 | 516 | 2.37e-164 | 476 |
Msa0256510 | AT4G21760.1 | 47.887 | 497 | 235 | 8 | 2 | 479 | 20 | 511 | 3.87e-163 | 473 |
Msa0256510 | AT4G21760.2 | 47.140 | 507 | 234 | 8 | 2 | 479 | 20 | 521 | 1.94e-162 | 472 |
Msa0256510 | AT1G61810.3 | 47.166 | 494 | 231 | 7 | 3 | 466 | 1 | 494 | 3.05e-159 | 463 |
Msa0256510 | AT1G26560.1 | 45.738 | 481 | 232 | 9 | 31 | 483 | 31 | 510 | 1.69e-144 | 425 |
Msa0256510 | AT3G18080.1 | 42.589 | 479 | 242 | 4 | 32 | 483 | 39 | 511 | 5.63e-137 | 405 |
Msa0256510 | AT1G02850.2 | 45.648 | 471 | 226 | 9 | 33 | 482 | 27 | 488 | 1.93e-136 | 404 |
Msa0256510 | AT2G44480.1 | 41.649 | 485 | 253 | 6 | 28 | 484 | 31 | 513 | 1.60e-133 | 397 |
Msa0256510 | AT2G44480.3 | 41.649 | 485 | 253 | 6 | 28 | 484 | 62 | 544 | 5.94e-133 | 396 |
Msa0256510 | AT1G61810.5 | 46.154 | 416 | 198 | 5 | 99 | 488 | 1 | 416 | 2.26e-132 | 390 |
Msa0256510 | AT1G02850.5 | 43.725 | 494 | 225 | 10 | 33 | 482 | 27 | 511 | 6.60e-132 | 393 |
Msa0256510 | AT3G18070.1 | 41.614 | 471 | 248 | 5 | 32 | 479 | 30 | 496 | 7.48e-132 | 392 |
Msa0256510 | AT5G54570.1 | 43.595 | 484 | 241 | 10 | 26 | 479 | 24 | 505 | 1.00e-130 | 390 |
Msa0256510 | AT3G18070.3 | 41.189 | 471 | 244 | 5 | 32 | 479 | 30 | 490 | 1.63e-130 | 388 |
Msa0256510 | AT1G02850.4 | 43.636 | 495 | 225 | 11 | 33 | 482 | 27 | 512 | 4.16e-130 | 388 |
Msa0256510 | AT1G61810.4 | 46.062 | 419 | 196 | 7 | 3 | 391 | 1 | 419 | 1.18e-129 | 384 |
Msa0256510 | AT4G27830.1 | 42.424 | 495 | 245 | 9 | 15 | 482 | 6 | 487 | 8.86e-128 | 382 |
Msa0256510 | AT2G25630.1 | 42.944 | 496 | 250 | 11 | 4 | 480 | 3 | 484 | 2.33e-126 | 377 |
Msa0256510 | AT5G44640.1 | 41.107 | 506 | 261 | 10 | 5 | 480 | 4 | 502 | 2.46e-125 | 375 |
Msa0256510 | AT2G44450.1 | 42.562 | 484 | 242 | 9 | 31 | 485 | 30 | 506 | 3.09e-125 | 375 |
Msa0256510 | AT1G61820.3 | 46.866 | 367 | 182 | 3 | 131 | 484 | 4 | 370 | 1.50e-124 | 369 |
Msa0256510 | AT1G02850.1 | 43.524 | 471 | 209 | 10 | 33 | 482 | 27 | 461 | 1.61e-123 | 370 |
Msa0256510 | AT4G27820.1 | 43.243 | 481 | 229 | 11 | 30 | 482 | 21 | 485 | 4.38e-123 | 370 |
Msa0256510 | AT5G42260.1 | 40.873 | 504 | 260 | 11 | 3 | 475 | 1 | 497 | 3.64e-122 | 367 |
Msa0256510 | AT5G36890.1 | 40.779 | 488 | 245 | 9 | 33 | 490 | 17 | 490 | 9.96e-122 | 366 |
Msa0256510 | AT5G36890.2 | 41.509 | 477 | 235 | 9 | 33 | 479 | 17 | 479 | 1.63e-121 | 365 |
Msa0256510 | AT5G24550.1 | 42.204 | 481 | 248 | 8 | 32 | 482 | 32 | 512 | 9.31e-121 | 365 |
Msa0256510 | AT3G62750.1 | 41.566 | 498 | 239 | 12 | 12 | 482 | 4 | 476 | 3.17e-120 | 362 |
Msa0256510 | AT3G60140.1 | 40.530 | 528 | 271 | 12 | 1 | 493 | 1 | 520 | 8.34e-120 | 363 |
Msa0256510 | AT3G62750.2 | 41.566 | 498 | 239 | 12 | 12 | 482 | 30 | 502 | 1.13e-119 | 362 |
Msa0256510 | AT1G51470.1 | 41.189 | 488 | 244 | 10 | 20 | 479 | 37 | 509 | 1.05e-118 | 358 |
Msa0256510 | AT1G47600.2 | 40.862 | 487 | 246 | 10 | 20 | 479 | 37 | 508 | 1.26e-118 | 358 |
Msa0256510 | AT1G47600.1 | 40.779 | 488 | 246 | 10 | 20 | 479 | 37 | 509 | 1.68e-118 | 358 |
Msa0256510 | AT4G22100.1 | 39.841 | 502 | 262 | 10 | 8 | 484 | 1 | 487 | 2.15e-118 | 358 |
Msa0256510 | AT3G60130.1 | 40.041 | 492 | 258 | 10 | 26 | 487 | 24 | 508 | 4.85e-117 | 354 |
Msa0256510 | AT1G60090.2 | 38.402 | 513 | 274 | 9 | 15 | 499 | 7 | 505 | 1.07e-116 | 353 |
Msa0256510 | AT1G60090.1 | 38.372 | 516 | 277 | 11 | 15 | 499 | 7 | 512 | 5.04e-115 | 349 |
Msa0256510 | AT1G45191.4 | 40.161 | 498 | 257 | 10 | 8 | 479 | 1 | 483 | 9.96e-115 | 348 |
Msa0256510 | AT2G44470.3 | 38.703 | 509 | 280 | 10 | 1 | 480 | 1 | 506 | 2.13e-114 | 350 |
Msa0256510 | AT5G24540.1 | 42.204 | 481 | 248 | 8 | 32 | 482 | 32 | 512 | 1.74e-113 | 346 |
Msa0256510 | AT1G45191.2 | 39.479 | 499 | 265 | 9 | 8 | 479 | 1 | 489 | 6.44e-113 | 344 |
Msa0256510 | AT1G45191.6 | 39.364 | 503 | 265 | 10 | 8 | 479 | 1 | 494 | 3.89e-112 | 342 |
Msa0256510 | AT2G44480.2 | 41.646 | 413 | 212 | 5 | 99 | 484 | 1 | 411 | 6.46e-112 | 338 |
Msa0256510 | AT2G44460.1 | 40.430 | 512 | 266 | 11 | 1 | 480 | 1 | 505 | 6.14e-110 | 338 |
Msa0256510 | AT1G45191.1 | 39.029 | 515 | 262 | 10 | 8 | 479 | 1 | 506 | 1.39e-109 | 336 |
Msa0256510 | AT3G62740.1 | 39.608 | 510 | 249 | 15 | 3 | 482 | 1 | 481 | 2.18e-109 | 334 |
Msa0256510 | AT2G44490.1 | 38.521 | 514 | 281 | 10 | 19 | 499 | 1 | 512 | 2.80e-109 | 336 |
Msa0256510 | AT5G54570.3 | 41.628 | 430 | 221 | 8 | 26 | 427 | 24 | 451 | 4.06e-107 | 327 |
Msa0256510 | AT2G32860.2 | 39.300 | 486 | 259 | 10 | 29 | 481 | 91 | 573 | 9.20e-106 | 328 |
Msa0256510 | AT3G21370.1 | 40.456 | 482 | 250 | 15 | 32 | 479 | 33 | 511 | 1.13e-105 | 326 |
Msa0256510 | AT3G60120.1 | 39.228 | 492 | 265 | 10 | 19 | 479 | 1 | 489 | 1.43e-105 | 326 |
Msa0256510 | AT5G54570.2 | 42.927 | 410 | 203 | 9 | 99 | 479 | 1 | 408 | 1.55e-105 | 322 |
Msa0256510 | AT2G32860.1 | 39.220 | 487 | 257 | 11 | 29 | 481 | 91 | 572 | 4.18e-105 | 327 |
Msa0256510 | AT1G02850.3 | 43.500 | 400 | 183 | 7 | 33 | 391 | 27 | 424 | 4.35e-105 | 321 |
Msa0256510 | AT5G28510.1 | 37.903 | 496 | 271 | 11 | 30 | 490 | 37 | 530 | 4.56e-104 | 322 |
Msa0256510 | AT3G09260.1 | 39.175 | 485 | 255 | 14 | 30 | 480 | 33 | 511 | 7.47e-104 | 321 |
Msa0256510 | AT1G75940.1 | 39.798 | 495 | 245 | 13 | 32 | 483 | 37 | 521 | 1.47e-103 | 320 |
Msa0256510 | AT5G25980.2 | 38.200 | 500 | 270 | 12 | 30 | 497 | 48 | 540 | 2.41e-102 | 318 |
Msa0256510 | AT4G27830.2 | 41.363 | 411 | 202 | 8 | 99 | 482 | 1 | 399 | 2.70e-101 | 311 |
Msa0256510 | AT1G66280.1 | 36.944 | 517 | 281 | 14 | 1 | 479 | 1 | 510 | 1.12e-100 | 313 |
Msa0256510 | AT3G62750.4 | 40.632 | 443 | 213 | 11 | 12 | 429 | 30 | 447 | 1.18e-99 | 308 |
Msa0256510 | AT3G18070.4 | 44.582 | 323 | 165 | 3 | 32 | 342 | 30 | 350 | 4.77e-99 | 304 |
Msa0256510 | AT4G27820.2 | 42.476 | 412 | 197 | 10 | 99 | 482 | 1 | 400 | 7.86e-99 | 305 |
Msa0256510 | AT4G27820.3 | 42.476 | 412 | 197 | 10 | 99 | 482 | 1 | 400 | 7.86e-99 | 305 |
Msa0256510 | AT1G61810.2 | 49.828 | 291 | 129 | 4 | 10 | 283 | 8 | 298 | 3.76e-98 | 299 |
Msa0256510 | AT5G26000.1 | 37.067 | 491 | 273 | 10 | 32 | 491 | 38 | 523 | 7.41e-98 | 306 |
Msa0256510 | AT3G60130.3 | 39.806 | 412 | 223 | 8 | 94 | 487 | 41 | 445 | 4.89e-97 | 301 |
Msa0256510 | AT1G66270.1 | 37.190 | 484 | 263 | 11 | 30 | 479 | 34 | 510 | 1.55e-96 | 302 |
Msa0256510 | AT1G52400.3 | 37.550 | 498 | 270 | 14 | 28 | 490 | 35 | 526 | 3.09e-96 | 301 |
Msa0256510 | AT1G52400.1 | 37.550 | 498 | 270 | 14 | 28 | 490 | 35 | 526 | 3.09e-96 | 301 |
Msa0256510 | AT1G66270.2 | 37.137 | 482 | 264 | 11 | 30 | 479 | 34 | 508 | 1.26e-95 | 300 |
Msa0256510 | AT3G03640.1 | 37.630 | 481 | 261 | 12 | 34 | 479 | 36 | 512 | 1.35e-95 | 300 |
Msa0256510 | AT3G62750.6 | 40.146 | 411 | 199 | 10 | 99 | 482 | 1 | 391 | 1.70e-94 | 293 |
Msa0256510 | AT3G62750.5 | 40.146 | 411 | 199 | 10 | 99 | 482 | 1 | 391 | 1.70e-94 | 293 |
Msa0256510 | AT3G60130.2 | 38.771 | 423 | 223 | 9 | 94 | 487 | 41 | 456 | 1.02e-93 | 293 |
Msa0256510 | AT5G24540.2 | 40.662 | 423 | 223 | 6 | 32 | 426 | 32 | 454 | 3.86e-93 | 291 |
Msa0256510 | AT1G60270.1 | 42.857 | 343 | 180 | 4 | 8 | 338 | 1 | 339 | 2.06e-92 | 286 |
Msa0256510 | AT3G62740.2 | 39.381 | 452 | 217 | 14 | 3 | 426 | 1 | 423 | 2.39e-92 | 288 |
Msa0256510 | AT2G44480.4 | 42.857 | 329 | 169 | 4 | 27 | 337 | 61 | 388 | 2.87e-92 | 286 |
Msa0256510 | AT2G44470.1 | 35.982 | 453 | 260 | 8 | 1 | 426 | 1 | 450 | 1.04e-89 | 282 |
Msa0256510 | AT3G60140.2 | 39.286 | 420 | 218 | 9 | 1 | 391 | 1 | 412 | 3.69e-89 | 281 |
Msa0256510 | AT3G62750.7 | 44.248 | 339 | 158 | 7 | 12 | 335 | 4 | 326 | 3.42e-87 | 273 |
Msa0256510 | AT3G62750.8 | 44.248 | 339 | 158 | 7 | 12 | 335 | 4 | 326 | 3.42e-87 | 273 |
Msa0256510 | AT2G44450.2 | 41.160 | 362 | 192 | 6 | 138 | 485 | 1 | 355 | 1.77e-86 | 270 |
Msa0256510 | AT3G62750.3 | 44.248 | 339 | 158 | 7 | 12 | 335 | 30 | 352 | 6.08e-86 | 272 |
Msa0256510 | AT1G45191.3 | 41.543 | 337 | 177 | 4 | 8 | 328 | 1 | 333 | 7.05e-86 | 271 |
Msa0256510 | AT1G45191.5 | 41.543 | 337 | 177 | 4 | 8 | 328 | 1 | 333 | 7.54e-86 | 271 |
Msa0256510 | AT5G25980.3 | 37.939 | 427 | 229 | 10 | 30 | 427 | 48 | 467 | 1.62e-85 | 271 |
Msa0256510 | AT5G25980.1 | 37.939 | 427 | 229 | 10 | 30 | 427 | 48 | 467 | 1.62e-85 | 271 |
Msa0256510 | AT3G18070.2 | 39.329 | 328 | 186 | 2 | 163 | 479 | 94 | 419 | 2.57e-85 | 270 |
Msa0256510 | AT3G18070.2 | 54.098 | 61 | 28 | 0 | 32 | 92 | 30 | 90 | 5.04e-15 | 77.4 |
Msa0256510 | AT5G26000.2 | 36.557 | 424 | 236 | 8 | 32 | 427 | 38 | 456 | 2.60e-81 | 260 |
Msa0256510 | AT2G44470.2 | 39.420 | 345 | 190 | 6 | 1 | 329 | 1 | 342 | 8.21e-81 | 257 |
Msa0256510 | AT3G18070.7 | 38.835 | 309 | 176 | 2 | 182 | 479 | 1 | 307 | 1.30e-78 | 249 |
Msa0256510 | AT2G44460.2 | 41.047 | 363 | 192 | 7 | 136 | 480 | 1 | 359 | 1.71e-76 | 247 |
Msa0256510 | AT1G52400.2 | 36.111 | 432 | 237 | 12 | 28 | 426 | 35 | 460 | 3.93e-76 | 247 |
Msa0256510 | AT2G44480.5 | 39.672 | 305 | 169 | 4 | 193 | 484 | 5 | 307 | 2.38e-74 | 238 |
Msa0256510 | AT5G48375.1 | 34.763 | 443 | 202 | 13 | 30 | 448 | 36 | 415 | 9.57e-67 | 222 |
Msa0256510 | AT1G60270.2 | 41.667 | 252 | 135 | 2 | 99 | 338 | 1 | 252 | 5.36e-66 | 215 |
Msa0256510 | AT1G51490.1 | 38.608 | 316 | 153 | 11 | 41 | 333 | 29 | 326 | 1.45e-60 | 205 |
Msa0256510 | AT3G18070.5 | 38.333 | 240 | 137 | 1 | 163 | 391 | 94 | 333 | 1.90e-57 | 194 |
Msa0256510 | AT3G18070.5 | 54.098 | 61 | 28 | 0 | 32 | 92 | 30 | 90 | 3.17e-15 | 77.4 |
Msa0256510 | AT5G16580.1 | 36.949 | 295 | 156 | 6 | 157 | 437 | 21 | 299 | 7.19e-51 | 176 |
Msa0256510 | AT3G18070.6 | 37.557 | 221 | 127 | 1 | 182 | 391 | 1 | 221 | 8.55e-51 | 173 |
Msa0256510 | AT3G06510.1 | 26.406 | 409 | 224 | 13 | 94 | 481 | 159 | 511 | 1.09e-24 | 108 |
Msa0256510 | AT3G06510.2 | 25.635 | 433 | 231 | 14 | 94 | 481 | 159 | 545 | 1.42e-22 | 102 |
Find 131 sgRNAs with CRISPR-Local
Find 341 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCAACAACATATTTATTTA+AGG | 0.120355 | 2_2:+51306154 | Msa0256510:three_prime_UTR |
CAACATACTATTTATTATTA+AGG | 0.138606 | 2_2:+51306003 | Msa0256510:three_prime_UTR |
AGTAGTGAATTTACTGAATT+AGG | 0.142690 | 2_2:-51303568 | None:intergenic |
GATCACTCAGAACTTATTTA+AGG | 0.181353 | 2_2:+51306379 | Msa0256510:three_prime_UTR |
AATTTGCGAGAAACGTTATT+TGG | 0.192129 | 2_2:+51306116 | Msa0256510:three_prime_UTR |
TTCCCAAATGGTTTCCTCTT+TGG | 0.209304 | 2_2:+51302080 | Msa0256510:CDS |
CCCATGTATATTACAGAAAA+TGG | 0.218730 | 2_2:+51305370 | Msa0256510:CDS |
TATCAATTATTTATGATATA+TGG | 0.220858 | 2_2:-51301908 | None:intergenic |
CTAACAACTTACAATATATA+TGG | 0.250587 | 2_2:+51301884 | Msa0256510:five_prime_UTR |
CTTGCTCAACTCTTCTATAT+TGG | 0.251613 | 2_2:-51305888 | None:intergenic |
TGATCATTATCATCGCTATT+TGG | 0.257693 | 2_2:+51302421 | Msa0256510:CDS |
CCTTTCGGAAACTGTTATAC+TGG | 0.286810 | 2_2:+51304058 | Msa0256510:CDS |
TTTATACCGCAAACAATATC+AGG | 0.297815 | 2_2:+51304147 | Msa0256510:CDS |
AGCAAGCCATGCCCGGATTT+AGG | 0.305856 | 2_2:-51303458 | None:intergenic |
GTAGTGAATTTACTGAATTA+GGG | 0.307506 | 2_2:-51303567 | None:intergenic |
CATATATATTGTAAGTTGTT+AGG | 0.310482 | 2_2:-51301883 | None:intergenic |
ATAAGTGATGTATGTTTATA+CGG | 0.313177 | 2_2:+51306207 | Msa0256510:three_prime_UTR |
TGGAGATAGGGTTAAGTATT+GGG | 0.316186 | 2_2:+51303958 | Msa0256510:CDS |
GAAGAAGCTCGTCCAATAAA+AGG | 0.321375 | 2_2:+51304918 | Msa0256510:CDS |
GAAATTTGTTTCAAGAGCTT+TGG | 0.322542 | 2_2:+51303938 | Msa0256510:CDS |
CCAAATCTTGTTTCCGACTT+TGG | 0.324430 | 2_2:+51303995 | Msa0256510:CDS |
ATGGTAAAGGTTTAAGCAAC+TGG | 0.328340 | 2_2:+51302248 | Msa0256510:CDS |
TAACATGGGTTGATTCTGTT+TGG | 0.337767 | 2_2:+51306049 | Msa0256510:three_prime_UTR |
GTTTCAAGAGCTTTGGAGAT+AGG | 0.340257 | 2_2:+51303945 | Msa0256510:CDS |
CCTCTTAACTTATAGCTTAA+CGG | 0.343612 | 2_2:+51306282 | Msa0256510:three_prime_UTR |
AACATACTATTTATTATTAA+GGG | 0.347502 | 2_2:+51306004 | Msa0256510:three_prime_UTR |
TTCTTAGTTATACCTAAATC+CGG | 0.360539 | 2_2:+51303446 | Msa0256510:intron |
ACCTTAAATAAATATGTTGT+TGG | 0.361049 | 2_2:-51306155 | None:intergenic |
GGTCATTGTTCCCCTCCTTT+CGG | 0.369030 | 2_2:+51304043 | Msa0256510:CDS |
TTCCAAAGAGGAAACCATTT+GGG | 0.373702 | 2_2:-51302082 | None:intergenic |
GTTGCCTAGGTTCTCATCTA+AGG | 0.375503 | 2_2:+51304800 | Msa0256510:CDS |
GTGATAGACAAGCTGCAAAC+AGG | 0.383393 | 2_2:+51304322 | Msa0256510:CDS |
CGTTGTTTGACAACTTTGAA+TGG | 0.384234 | 2_2:+51305747 | Msa0256510:CDS |
CAGCTTTGCTTAGAGCCATA+AGG | 0.398294 | 2_2:+51305586 | Msa0256510:CDS |
GCTGAGATGCGCTCTATTCT+CGG | 0.403127 | 2_2:+51304771 | Msa0256510:CDS |
AGAATAGAGCGCATCTCAGC+AGG | 0.403695 | 2_2:-51304768 | None:intergenic |
AACAAGATTTGGCTCATTCA+TGG | 0.403887 | 2_2:-51303984 | None:intergenic |
CCAAAGTCGGAAACAAGATT+TGG | 0.405098 | 2_2:-51303995 | None:intergenic |
TCTAAGAGGTTCATACATAA+AGG | 0.417000 | 2_2:-51304289 | None:intergenic |
TTGTTACCTGATATTGTTTG+CGG | 0.421555 | 2_2:-51304153 | None:intergenic |
TTGGAGATAGGGTTAAGTAT+TGG | 0.424221 | 2_2:+51303957 | Msa0256510:CDS |
CCGTTAAGCTATAAGTTAAG+AGG | 0.428233 | 2_2:-51306282 | None:intergenic |
TCAAGACTGGCCACAAGAGC+TGG | 0.433690 | 2_2:+51303517 | Msa0256510:CDS |
GTTCCAAAGAGGAAACCATT+TGG | 0.436217 | 2_2:-51302083 | None:intergenic |
TGGCATTCCAATTGGTGATC+AGG | 0.439107 | 2_2:+51304968 | Msa0256510:CDS |
AAAATTTGGACTTTATTATG+TGG | 0.449703 | 2_2:+51305787 | Msa0256510:CDS |
TTTCAAGAGCTTTGGAGATA+GGG | 0.450898 | 2_2:+51303946 | Msa0256510:CDS |
GGGCATGGCTTGCTTGATCT+AGG | 0.457956 | 2_2:+51303467 | Msa0256510:CDS |
ATTTACTACATGATTTCAAA+CGG | 0.464093 | 2_2:+51305538 | Msa0256510:CDS |
TCACATTCTTCATCTCTAAG+AGG | 0.467731 | 2_2:-51304303 | None:intergenic |
CAAGAGCTGGAACAAAGATA+TGG | 0.472569 | 2_2:+51303530 | Msa0256510:CDS |
ACGGAAGCACGGTCAAATAG+AGG | 0.473492 | 2_2:+51306301 | Msa0256510:three_prime_UTR |
AGAGCCAGCCTGGACTTCAT+TGG | 0.477032 | 2_2:+51304837 | Msa0256510:CDS |
CCGCAGGGTTATACCGCGTT+TGG | 0.478531 | 2_2:-51306079 | None:intergenic |
TATCTTTGTTCCAGCTCTTG+TGG | 0.483806 | 2_2:-51303527 | None:intergenic |
AATAGATCTCAATTCCCAAA+TGG | 0.489663 | 2_2:+51302068 | Msa0256510:CDS |
GGCAAGGTTACTAGATCCCC+TGG | 0.491073 | 2_2:+51304731 | Msa0256510:intron |
TAACAACTTACAATATATAT+GGG | 0.493274 | 2_2:+51301885 | Msa0256510:five_prime_UTR |
ATGAGTACCTGATCACCAAT+TGG | 0.493854 | 2_2:-51304975 | None:intergenic |
AACCACTGAACAGAAAGTTT+AGG | 0.495370 | 2_2:-51305833 | None:intergenic |
TTCATTGGCATCAATAACTA+CGG | 0.499196 | 2_2:+51304852 | Msa0256510:CDS |
TAGATGAGAACCTAGGCAAC+TGG | 0.500134 | 2_2:-51304797 | None:intergenic |
TTCCTAAACTTTCTGTTCAG+TGG | 0.500829 | 2_2:+51305831 | Msa0256510:CDS |
TCAAATGATAACTTAGACAA+CGG | 0.501685 | 2_2:-51305939 | None:intergenic |
TGATGATGAATTGTCACAAA+TGG | 0.504920 | 2_2:-51303497 | None:intergenic |
GCAAAGCAAGGTGGAACCAT+TGG | 0.506834 | 2_2:+51304252 | Msa0256510:CDS |
CTGAGATGCGCTCTATTCTC+GGG | 0.509863 | 2_2:+51304772 | Msa0256510:CDS |
TAGATCAAGCAAGCCATGCC+CGG | 0.515688 | 2_2:-51303465 | None:intergenic |
AAGTATATATACTTGGTAAG+AGG | 0.516534 | 2_2:-51302114 | None:intergenic |
GACACTTCTAAGAGCCAGCC+TGG | 0.520389 | 2_2:+51304827 | Msa0256510:CDS |
ATCAAATTGATGTCATCACT+TGG | 0.520414 | 2_2:+51302560 | Msa0256510:CDS |
TCATTGGCATCAATAACTAC+GGG | 0.523195 | 2_2:+51304853 | Msa0256510:CDS |
ATGAGAGGAACATATTCTCC+TGG | 0.525155 | 2_2:+51304022 | Msa0256510:CDS |
TACCATGTATCCTCTTACAT+CGG | 0.525916 | 2_2:-51305720 | None:intergenic |
TGACAATTCATCATCAAGAC+TGG | 0.526302 | 2_2:+51303504 | Msa0256510:CDS |
AGGATATTCTTCGCTACTCA+AGG | 0.530163 | 2_2:+51305497 | Msa0256510:intron |
TTAAAGCTTCAAGTAGCCGC+AGG | 0.531671 | 2_2:-51306095 | None:intergenic |
TATTGATGCCAATGAAGTCC+AGG | 0.531915 | 2_2:-51304845 | None:intergenic |
AGAAAAGGTGCCGATGTAAG+AGG | 0.541742 | 2_2:+51305710 | Msa0256510:intron |
CTTTCGGAAACTGTTATACT+GGG | 0.544594 | 2_2:+51304059 | Msa0256510:CDS |
ATGAGAGATGGCATTCCAAT+TGG | 0.546379 | 2_2:+51304960 | Msa0256510:CDS |
TTCTCGGGAACCAGTTGCCT+AGG | 0.548933 | 2_2:+51304787 | Msa0256510:CDS |
TATCATTACTAGAATTGTTG+AGG | 0.550205 | 2_2:-51305865 | None:intergenic |
TCCGACTTTGGCTTTATGAG+AGG | 0.555997 | 2_2:+51304007 | Msa0256510:CDS |
TCTTAGTTATACCTAAATCC+GGG | 0.559436 | 2_2:+51303447 | Msa0256510:intron |
TATAACAGTTTCCGAAAGGA+GGG | 0.560545 | 2_2:-51304054 | None:intergenic |
CAAACAACTGGGATGAGAGA+TGG | 0.560832 | 2_2:+51304948 | Msa0256510:CDS |
TGTGAATATCACTAATAACA+TGG | 0.564081 | 2_2:+51306034 | Msa0256510:three_prime_UTR |
ATGATAAACAATGATGAGAA+TGG | 0.565100 | 2_2:+51302386 | Msa0256510:CDS |
ATGTAAGAGGATACATGGTA+TGG | 0.567786 | 2_2:+51305723 | Msa0256510:CDS |
TATTCTTCGCTACTCAAGGC+AGG | 0.572710 | 2_2:+51305501 | Msa0256510:CDS |
TGGAACAAAGATATGGTGGT+TGG | 0.575720 | 2_2:+51303537 | Msa0256510:CDS |
TATGCTGTTGTCACATGCTA+AGG | 0.579173 | 2_2:+51304117 | Msa0256510:CDS |
GTATAACAGTTTCCGAAAGG+AGG | 0.580594 | 2_2:-51304055 | None:intergenic |
AAAGGAGGGGAACAATGACC+AGG | 0.581271 | 2_2:-51304040 | None:intergenic |
CTTCGAGAGGGCAAGTAGAG+AGG | 0.583371 | 2_2:-51304899 | None:intergenic |
GTTATACCTAAATCCGGGCA+TGG | 0.585018 | 2_2:+51303452 | Msa0256510:intron |
TGCCGATGTAAGAGGATACA+TGG | 0.588178 | 2_2:+51305718 | Msa0256510:CDS |
ATGTTTATCCAGGCAAAGCA+AGG | 0.608411 | 2_2:+51304240 | Msa0256510:intron |
CTTATAGCTTAACGGAAGCA+CGG | 0.609529 | 2_2:+51306290 | Msa0256510:three_prime_UTR |
GATGCCAATGAAGTCCAGGC+TGG | 0.611035 | 2_2:-51304841 | None:intergenic |
TGATAGACAAGCTGCAAACA+GGG | 0.611361 | 2_2:+51304323 | Msa0256510:CDS |
TTGGACGAGCTTCTTCGAGA+GGG | 0.612747 | 2_2:-51304911 | None:intergenic |
TCCTCTCATAAAGCCAAAGT+CGG | 0.613581 | 2_2:-51304008 | None:intergenic |
AGGAAGTGCTTGTTCCAAAG+AGG | 0.614337 | 2_2:-51302094 | None:intergenic |
TCAAATTGATGTCATCACTT+GGG | 0.615282 | 2_2:+51302561 | Msa0256510:CDS |
GATAAATAGAGGTTTATGAG+TGG | 0.616780 | 2_2:+51306352 | Msa0256510:three_prime_UTR |
CCAGTATAACAGTTTCCGAA+AGG | 0.618205 | 2_2:-51304058 | None:intergenic |
GTGAATATCACTAATAACAT+GGG | 0.619738 | 2_2:+51306035 | Msa0256510:three_prime_UTR |
ACAGCATATTGTGCATAGCA+AGG | 0.621689 | 2_2:-51304102 | None:intergenic |
TGGTAAAGGTTTAAGCAACT+GGG | 0.623254 | 2_2:+51302249 | Msa0256510:CDS |
CCAGCCTATGACAAAAGCAT+AGG | 0.624034 | 2_2:-51304346 | None:intergenic |
GGTATGTGCAACAATACCAA+TGG | 0.624553 | 2_2:-51304268 | None:intergenic |
CTACGGGGCTCTCTATGTCA+AGG | 0.624808 | 2_2:+51304869 | Msa0256510:CDS |
TGGCTCTAAGCAAAGCTGCA+AGG | 0.627948 | 2_2:-51305581 | None:intergenic |
ATTGGACGAGCTTCTTCGAG+AGG | 0.628914 | 2_2:-51304912 | None:intergenic |
TAGTGAATTTACTGAATTAG+GGG | 0.635079 | 2_2:-51303566 | None:intergenic |
TAAAGCTTCAAGTAGCCGCA+GGG | 0.637709 | 2_2:-51306094 | None:intergenic |
GAATAGAGCGCATCTCAGCA+GGG | 0.641200 | 2_2:-51304767 | None:intergenic |
GACAACTTTGAATGGAACAG+TGG | 0.646793 | 2_2:+51305755 | Msa0256510:CDS |
GTCAAATAGAGGTTTATGAG+AGG | 0.648357 | 2_2:+51306312 | Msa0256510:three_prime_UTR |
GAGCTGGAACAAAGATATGG+TGG | 0.651160 | 2_2:+51303533 | Msa0256510:CDS |
ATAACAGTTTCCGAAAGGAG+GGG | 0.659674 | 2_2:-51304053 | None:intergenic |
GATGTATTCAGTCACACACC+AGG | 0.667347 | 2_2:+51302271 | Msa0256510:CDS |
TGGTGCAAACACATTATCAG+AGG | 0.669251 | 2_2:-51301942 | None:intergenic |
GTTTGGATACTGACCAAACG+CGG | 0.672125 | 2_2:+51306066 | Msa0256510:three_prime_UTR |
TTCTCCTTAGATGAGAACCT+AGG | 0.683372 | 2_2:-51304804 | None:intergenic |
TTTATCCAGGCAAAGCAAGG+TGG | 0.685226 | 2_2:+51304243 | Msa0256510:intron |
ATATTGTGCATAGCAAGGAG+AGG | 0.695537 | 2_2:-51304097 | None:intergenic |
CATTGGCATCAATAACTACG+GGG | 0.728835 | 2_2:+51304854 | Msa0256510:CDS |
CCAAACGCGGTATAACCCTG+CGG | 0.826727 | 2_2:+51306079 | Msa0256510:three_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATCAATTATTTATGATATA+TGG | - | chr2_2:51301911-51301930 | None:intergenic | 10.0% |
!! | TATATTAATAAATGTAGTTA+AGG | - | chr2_2:51302497-51302516 | None:intergenic | 10.0% |
!! | TTACTTAACTAAAAAAAAAA+AGG | - | chr2_2:51303596-51303615 | None:intergenic | 10.0% |
!! | AACATACTATTTATTATTAA+GGG | + | chr2_2:51306004-51306023 | Msa0256510:three_prime_UTR | 10.0% |
!!! | ATACAATTTCATTTTTTTAA+TGG | + | chr2_2:51306182-51306201 | Msa0256510:three_prime_UTR | 10.0% |
!! | TAACAACTTACAATATATAT+GGG | + | chr2_2:51301885-51301904 | Msa0256510:five_prime_UTR | 15.0% |
!!! | TCATATTACTGAATTTTTAT+AGG | - | chr2_2:51302452-51302471 | None:intergenic | 15.0% |
!!! | TATATAGATTTTCAATTTCA+TGG | + | chr2_2:51302591-51302610 | Msa0256510:CDS | 15.0% |
!! | TAATTTGAAAGATAAAATTG+TGG | - | chr2_2:51302666-51302685 | None:intergenic | 15.0% |
!! | AAATTTACTTGTAGTTAAAT+AGG | - | chr2_2:51302980-51302999 | None:intergenic | 15.0% |
!!! | ATGAACAATTATTTGATAAT+CGG | + | chr2_2:51305214-51305233 | Msa0256510:intron | 15.0% |
!! | CAACATACTATTTATTATTA+AGG | + | chr2_2:51306003-51306022 | Msa0256510:three_prime_UTR | 15.0% |
!!! | TAATTGATTTTGATAAATAG+AGG | + | chr2_2:51306341-51306360 | Msa0256510:three_prime_UTR | 15.0% |
!! | CATATATATTGTAAGTTGTT+AGG | - | chr2_2:51301886-51301905 | None:intergenic | 20.0% |
!! | CTAACAACTTACAATATATA+TGG | + | chr2_2:51301884-51301903 | Msa0256510:five_prime_UTR | 20.0% |
!!! | ACTGAAAAAGTATATATACT+TGG | - | chr2_2:51302124-51302143 | None:intergenic | 20.0% |
!! | AATGGAAAAAATCTCATTAA+TGG | - | chr2_2:51302194-51302213 | None:intergenic | 20.0% |
!! | TTCAATCTATGAAGAAAAAA+TGG | - | chr2_2:51302212-51302231 | None:intergenic | 20.0% |
!!! | ATTTTTTCTTCATAGATTGA+AGG | + | chr2_2:51302211-51302230 | Msa0256510:intron | 20.0% |
!! | AAATGAAAAAGAAATATACC+TGG | - | chr2_2:51302292-51302311 | None:intergenic | 20.0% |
!! | TGAATAACTACAATACAATT+TGG | + | chr2_2:51302350-51302369 | Msa0256510:intron | 20.0% |
!!! | ATACAATTTGGTAAATTTTC+AGG | + | chr2_2:51302362-51302381 | Msa0256510:intron | 20.0% |
!! | AAACAGTTATGTGAATAATT+GGG | - | chr2_2:51302643-51302662 | None:intergenic | 20.0% |
!! | TACTATTCTCAATTTAGTAT+TGG | + | chr2_2:51303687-51303706 | Msa0256510:intron | 20.0% |
!!! | TTTTGTAATATTTCTACGTT+AGG | + | chr2_2:51304200-51304219 | Msa0256510:intron | 20.0% |
!! | TAAACTATTATCCATACAAA+TGG | + | chr2_2:51304441-51304460 | Msa0256510:intron | 20.0% |
!! | CTATTAGTTGAAATTCAAAT+AGG | + | chr2_2:51304501-51304520 | Msa0256510:intron | 20.0% |
!! | AAATTGTTCCAAATTTATGT+GGG | - | chr2_2:51304568-51304587 | None:intergenic | 20.0% |
!!! | GTTCTTTTCATTATGTTATA+TGG | + | chr2_2:51305011-51305030 | Msa0256510:intron | 20.0% |
!! | TGTCAATTAATGTTTGAAAA+TGG | + | chr2_2:51305053-51305072 | Msa0256510:intron | 20.0% |
!!! | ATGGATTTTTTTAAAGATTG+CGG | + | chr2_2:51305072-51305091 | Msa0256510:intron | 20.0% |
!! | TTATCAAATAATTGTTCATG+AGG | - | chr2_2:51305213-51305232 | None:intergenic | 20.0% |
!!! | TATATGATCTCATTTTTGTT+TGG | + | chr2_2:51305414-51305433 | Msa0256510:intron | 20.0% |
!! | ATTTACTACATGATTTCAAA+CGG | + | chr2_2:51305538-51305557 | Msa0256510:CDS | 20.0% |
!!! | AAAAGCATTCATAAAAAACA+AGG | - | chr2_2:51305646-51305665 | None:intergenic | 20.0% |
!! | AGTGGATATGATAAAAAATT+TGG | + | chr2_2:51305773-51305792 | Msa0256510:CDS | 20.0% |
!! | AAAATTTGGACTTTATTATG+TGG | + | chr2_2:51305787-51305806 | Msa0256510:CDS | 20.0% |
!! | TCCAACAACATATTTATTTA+AGG | + | chr2_2:51306154-51306173 | Msa0256510:three_prime_UTR | 20.0% |
!! | ACCTTAAATAAATATGTTGT+TGG | - | chr2_2:51306158-51306177 | None:intergenic | 20.0% |
!! | ATAAGTGATGTATGTTTATA+CGG | + | chr2_2:51306207-51306226 | Msa0256510:three_prime_UTR | 20.0% |
! | GTTGAATGAAAATGCAAAAA+TGG | + | chr2_2:51301967-51301986 | Msa0256510:exon | 25.0% |
! | AAGTATATATACTTGGTAAG+AGG | - | chr2_2:51302117-51302136 | None:intergenic | 25.0% |
! | AAGTATCTCAGAAGAAAAAA+AGG | - | chr2_2:51302157-51302176 | None:intergenic | 25.0% |
! | ATGATAAACAATGATGAGAA+TGG | + | chr2_2:51302386-51302405 | Msa0256510:CDS | 25.0% |
! | TTAATATAGTGCACTCTTTA+AGG | + | chr2_2:51302509-51302528 | Msa0256510:intron | 25.0% |
! | AACAGTTATGTGAATAATTG+GGG | - | chr2_2:51302642-51302661 | None:intergenic | 25.0% |
! | GAAACAGTTATGTGAATAAT+TGG | - | chr2_2:51302644-51302663 | None:intergenic | 25.0% |
! | TGATGACCATAATATAAAGT+AGG | - | chr2_2:51302901-51302920 | None:intergenic | 25.0% |
!!! | AGTTAAATAGGCTTTTAAGT+AGG | - | chr2_2:51302968-51302987 | None:intergenic | 25.0% |
!!! | TTAATAGGCTTTGTTGTTAT+AGG | - | chr2_2:51303029-51303048 | None:intergenic | 25.0% |
! | TATAACAACAAAGCCTATTA+AGG | + | chr2_2:51303028-51303047 | Msa0256510:intron | 25.0% |
! | ATAACAACAAAGCCTATTAA+GGG | + | chr2_2:51303029-51303048 | Msa0256510:intron | 25.0% |
! | AAAAGCCTGTTTAGTTAAAT+AGG | - | chr2_2:51303192-51303211 | None:intergenic | 25.0% |
! | TTCTTAGTTATACCTAAATC+CGG | + | chr2_2:51303446-51303465 | Msa0256510:intron | 25.0% |
! | TAGTGAATTTACTGAATTAG+GGG | - | chr2_2:51303569-51303588 | None:intergenic | 25.0% |
! | GTAGTGAATTTACTGAATTA+GGG | - | chr2_2:51303570-51303589 | None:intergenic | 25.0% |
! | AGTAGTGAATTTACTGAATT+AGG | - | chr2_2:51303571-51303590 | None:intergenic | 25.0% |
! | ACAAAAAATGCTTTCAGTTT+AGG | - | chr2_2:51304186-51304205 | None:intergenic | 25.0% |
! | AATATACTCACAAAATAGTG+AGG | - | chr2_2:51304527-51304546 | None:intergenic | 25.0% |
! | CAAATTGTTCCAAATTTATG+TGG | - | chr2_2:51304569-51304588 | None:intergenic | 25.0% |
! | TGAATTTCAACTAATAAGTG+AGG | + | chr2_2:51304591-51304610 | Msa0256510:intron | 25.0% |
! | GAATTTCAACTAATAAGTGA+GGG | + | chr2_2:51304592-51304611 | Msa0256510:intron | 25.0% |
! | AACATAATGAAAAGAACAGT+TGG | - | chr2_2:51305008-51305027 | None:intergenic | 25.0% |
! | TTATCAAATTGTGACATTAG+TGG | + | chr2_2:51305107-51305126 | Msa0256510:intron | 25.0% |
!! | CCATTTTCTGTAATATACAT+GGG | - | chr2_2:51305373-51305392 | None:intergenic | 25.0% |
!! | ACCATTTTCTGTAATATACA+TGG | - | chr2_2:51305374-51305393 | None:intergenic | 25.0% |
! | ATCACTTGTGTAATATATGA+TGG | + | chr2_2:51305452-51305471 | Msa0256510:intron | 25.0% |
! | AATTTGATTATGTGCAGAAA+AGG | + | chr2_2:51305695-51305714 | Msa0256510:intron | 25.0% |
! | TATCATTACTAGAATTGTTG+AGG | - | chr2_2:51305868-51305887 | None:intergenic | 25.0% |
! | TCAAATGATAACTTAGACAA+CGG | - | chr2_2:51305942-51305961 | None:intergenic | 25.0% |
! | TGTGAATATCACTAATAACA+TGG | + | chr2_2:51306034-51306053 | Msa0256510:three_prime_UTR | 25.0% |
! | GTGAATATCACTAATAACAT+GGG | + | chr2_2:51306035-51306054 | Msa0256510:three_prime_UTR | 25.0% |
! | TTTGCATTTTCATTCAACTG+TGG | - | chr2_2:51301965-51301984 | None:intergenic | 30.0% |
AATAGATCTCAATTCCCAAA+TGG | + | chr2_2:51302068-51302087 | Msa0256510:CDS | 30.0% | |
TATCTCAGAAGAAAAAAAGG+AGG | - | chr2_2:51302154-51302173 | None:intergenic | 30.0% | |
TGATCATTATCATCGCTATT+TGG | + | chr2_2:51302421-51302440 | Msa0256510:CDS | 30.0% | |
ATCAAATTGATGTCATCACT+TGG | + | chr2_2:51302560-51302579 | Msa0256510:CDS | 30.0% | |
TCAAATTGATGTCATCACTT+GGG | + | chr2_2:51302561-51302580 | Msa0256510:CDS | 30.0% | |
! | GATTTTCAATTTCATGGTCT+AGG | + | chr2_2:51302597-51302616 | Msa0256510:CDS | 30.0% |
ATAATTGGGGAATACTTACT+AGG | - | chr2_2:51302629-51302648 | None:intergenic | 30.0% | |
TACAGGCCTACTTTATATTA+TGG | + | chr2_2:51302892-51302911 | Msa0256510:intron | 30.0% | |
! | GCTTGTTTAGCTTATTTAGT+AGG | - | chr2_2:51302938-51302957 | None:intergenic | 30.0% |
!! | GTTGTTATAGGCTTTTAAGT+AGG | - | chr2_2:51303017-51303036 | None:intergenic | 30.0% |
CTATCTATTAGTCCCTTAAT+AGG | - | chr2_2:51303044-51303063 | None:intergenic | 30.0% | |
!! | TTTTTAAAAAGCCTAAGCCT+AGG | + | chr2_2:51303208-51303227 | Msa0256510:intron | 30.0% |
TCTTAGTTATACCTAAATCC+GGG | + | chr2_2:51303447-51303466 | Msa0256510:intron | 30.0% | |
! | TGATGATGAATTGTCACAAA+TGG | - | chr2_2:51303500-51303519 | None:intergenic | 30.0% |
GTGCTAGATAAAGAATAACT+TGG | + | chr2_2:51303770-51303789 | Msa0256510:intron | 30.0% | |
! | GATCTGTTAACTCAAACTTT+TGG | - | chr2_2:51303860-51303879 | None:intergenic | 30.0% |
! | AGTTTGAGTTAACAGATCAA+TGG | + | chr2_2:51303862-51303881 | Msa0256510:intron | 30.0% |
! | GAAATTTGTTTCAAGAGCTT+TGG | + | chr2_2:51303938-51303957 | Msa0256510:CDS | 30.0% |
TTTATACCGCAAACAATATC+AGG | + | chr2_2:51304147-51304166 | Msa0256510:CDS | 30.0% | |
TTGTTACCTGATATTGTTTG+CGG | - | chr2_2:51304156-51304175 | None:intergenic | 30.0% | |
! | TGTAATATTTCTACGTTAGG+TGG | + | chr2_2:51304203-51304222 | Msa0256510:intron | 30.0% |
! | GTAATATTTCTACGTTAGGT+GGG | + | chr2_2:51304204-51304223 | Msa0256510:intron | 30.0% |
TCTAAGAGGTTCATACATAA+AGG | - | chr2_2:51304292-51304311 | None:intergenic | 30.0% | |
GAATGTACACTATTAATGAC+AGG | + | chr2_2:51304664-51304683 | Msa0256510:intron | 30.0% | |
TTCATTGGCATCAATAACTA+CGG | + | chr2_2:51304852-51304871 | Msa0256510:CDS | 30.0% | |
! | GTTTGCAAAAAGCCTTTTAT+TGG | - | chr2_2:51304933-51304952 | None:intergenic | 30.0% |
CCCATGTATATTACAGAAAA+TGG | + | chr2_2:51305370-51305389 | Msa0256510:CDS | 30.0% | |
! | CTTGTGTAATATATGATGGA+TGG | + | chr2_2:51305456-51305475 | Msa0256510:intron | 30.0% |
! | TTATACTTTGTCTGTTGACT+GGG | + | chr2_2:51305668-51305687 | Msa0256510:intron | 30.0% |
AATTTGCGAGAAACGTTATT+TGG | + | chr2_2:51306116-51306135 | Msa0256510:three_prime_UTR | 30.0% | |
CCTCTTAACTTATAGCTTAA+CGG | + | chr2_2:51306282-51306301 | Msa0256510:three_prime_UTR | 30.0% | |
GATAAATAGAGGTTTATGAG+TGG | + | chr2_2:51306352-51306371 | Msa0256510:three_prime_UTR | 30.0% | |
GATCACTCAGAACTTATTTA+AGG | + | chr2_2:51306379-51306398 | Msa0256510:three_prime_UTR | 30.0% | |
TTCCAAAGAGGAAACCATTT+GGG | - | chr2_2:51302085-51302104 | None:intergenic | 35.0% | |
ATGGTAAAGGTTTAAGCAAC+TGG | + | chr2_2:51302248-51302267 | Msa0256510:CDS | 35.0% | |
TGGTAAAGGTTTAAGCAACT+GGG | + | chr2_2:51302249-51302268 | Msa0256510:CDS | 35.0% | |
TCTGAATGATTGTCTTTGAC+AGG | + | chr2_2:51302532-51302551 | Msa0256510:intron | 35.0% | |
GATGTAACAGGAGGAATATA+CGG | + | chr2_2:51302707-51302726 | Msa0256510:intron | 35.0% | |
ATGTAACAGGAGGAATATAC+GGG | + | chr2_2:51302708-51302727 | Msa0256510:intron | 35.0% | |
!!! | TGTAAATTTTTTCGTAGGCC+AGG | - | chr2_2:51302782-51302801 | None:intergenic | 35.0% |
TGGCCTACGAAAAAATTTAC+AGG | + | chr2_2:51302781-51302800 | Msa0256510:intron | 35.0% | |
!!! | AGGCCTGTAAATTTTTTCGT+AGG | - | chr2_2:51302787-51302806 | None:intergenic | 35.0% |
TATAAAGTAGGCCTGTAAGT+AGG | - | chr2_2:51302889-51302908 | None:intergenic | 35.0% | |
!! | AGGCTTTTAAGTAGGCTTTA+AGG | - | chr2_2:51302960-51302979 | None:intergenic | 35.0% |
TATTAATAGGCCAGCCTATT+AGG | + | chr2_2:51303134-51303153 | Msa0256510:intron | 35.0% | |
AAAAGCCTGTTAAGCCTAAT+AGG | - | chr2_2:51303151-51303170 | None:intergenic | 35.0% | |
TTGTAGAACATAACTCCACT+TGG | - | chr2_2:51303339-51303358 | None:intergenic | 35.0% | |
! | ATAGACAATCTGCTACTTAG+AGG | + | chr2_2:51303366-51303385 | Msa0256510:intron | 35.0% |
TGACAATTCATCATCAAGAC+TGG | + | chr2_2:51303504-51303523 | Msa0256510:CDS | 35.0% | |
TTGAGTGTAACCAAATGTGT+TGG | - | chr2_2:51303662-51303681 | None:intergenic | 35.0% | |
AAGAGAATTCATCAACTCGT+TGG | - | chr2_2:51303824-51303843 | None:intergenic | 35.0% | |
! | GAAGTTTGTCACTTCTTACT+TGG | + | chr2_2:51303884-51303903 | Msa0256510:intron | 35.0% |
ACTTCTTACTTGGTATTTGC+AGG | + | chr2_2:51303894-51303913 | Msa0256510:intron | 35.0% | |
!! | TTTCAAGAGCTTTGGAGATA+GGG | + | chr2_2:51303946-51303965 | Msa0256510:CDS | 35.0% |
TTGGAGATAGGGTTAAGTAT+TGG | + | chr2_2:51303957-51303976 | Msa0256510:CDS | 35.0% | |
TGGAGATAGGGTTAAGTATT+GGG | + | chr2_2:51303958-51303977 | Msa0256510:CDS | 35.0% | |
! | AACAAGATTTGGCTCATTCA+TGG | - | chr2_2:51303987-51304006 | None:intergenic | 35.0% |
TATAACAGTTTCCGAAAGGA+GGG | - | chr2_2:51304057-51304076 | None:intergenic | 35.0% | |
CTTTCGGAAACTGTTATACT+GGG | + | chr2_2:51304059-51304078 | Msa0256510:CDS | 35.0% | |
TACTGAATGGATGTTTATCC+AGG | + | chr2_2:51304230-51304249 | Msa0256510:intron | 35.0% | |
TCACATTCTTCATCTCTAAG+AGG | - | chr2_2:51304306-51304325 | None:intergenic | 35.0% | |
! | GAAAAGATAGTGTTGTTGCT+AGG | - | chr2_2:51304468-51304487 | None:intergenic | 35.0% |
TGTTCCAAATTTATGTGGGA+CGG | - | chr2_2:51304564-51304583 | None:intergenic | 35.0% | |
TCATTGGCATCAATAACTAC+GGG | + | chr2_2:51304853-51304872 | Msa0256510:CDS | 35.0% | |
! | AAAGGCTTTTTGCAAACAAC+TGG | + | chr2_2:51304936-51304955 | Msa0256510:CDS | 35.0% |
! | AAGGCTTTTTGCAAACAACT+GGG | + | chr2_2:51304937-51304956 | Msa0256510:CDS | 35.0% |
ACTTTATGCCTTGAGATTAC+AGG | + | chr2_2:51305161-51305180 | Msa0256510:intron | 35.0% | |
CTTTATGCCTTGAGATTACA+GGG | + | chr2_2:51305162-51305181 | Msa0256510:intron | 35.0% | |
!!! | TTCCTTTATTTTGTGCAGAC+AGG | + | chr2_2:51305271-51305290 | Msa0256510:intron | 35.0% |
TTCCTGTCTGCACAAAATAA+AGG | - | chr2_2:51305276-51305295 | None:intergenic | 35.0% | |
ATGGTTCTTTGTAGTTCCAA+AGG | + | chr2_2:51305300-51305319 | Msa0256510:intron | 35.0% | |
TGGTTCTTTGTAGTTCCAAA+GGG | + | chr2_2:51305301-51305320 | Msa0256510:intron | 35.0% | |
!! | GGCTATACAAAATTTGTTGC+AGG | + | chr2_2:51305477-51305496 | Msa0256510:intron | 35.0% |
GTTATACTTTGTCTGTTGAC+TGG | + | chr2_2:51305667-51305686 | Msa0256510:intron | 35.0% | |
! | TATACTTTGTCTGTTGACTG+GGG | + | chr2_2:51305669-51305688 | Msa0256510:intron | 35.0% |
TACCATGTATCCTCTTACAT+CGG | - | chr2_2:51305723-51305742 | None:intergenic | 35.0% | |
ATGTAAGAGGATACATGGTA+TGG | + | chr2_2:51305723-51305742 | Msa0256510:CDS | 35.0% | |
CGTTGTTTGACAACTTTGAA+TGG | + | chr2_2:51305747-51305766 | Msa0256510:CDS | 35.0% | |
TTCCTAAACTTTCTGTTCAG+TGG | + | chr2_2:51305831-51305850 | Msa0256510:CDS | 35.0% | |
AACCACTGAACAGAAAGTTT+AGG | - | chr2_2:51305836-51305855 | None:intergenic | 35.0% | |
CTTGCTCAACTCTTCTATAT+TGG | - | chr2_2:51305891-51305910 | None:intergenic | 35.0% | |
!! | TAACATGGGTTGATTCTGTT+TGG | + | chr2_2:51306049-51306068 | Msa0256510:three_prime_UTR | 35.0% |
CCGTTAAGCTATAAGTTAAG+AGG | - | chr2_2:51306285-51306304 | None:intergenic | 35.0% | |
GTCAAATAGAGGTTTATGAG+AGG | + | chr2_2:51306312-51306331 | Msa0256510:three_prime_UTR | 35.0% | |
TGGTGCAAACACATTATCAG+AGG | - | chr2_2:51301945-51301964 | None:intergenic | 40.0% | |
TTCCCAAATGGTTTCCTCTT+TGG | + | chr2_2:51302080-51302099 | Msa0256510:CDS | 40.0% | |
GTTCCAAAGAGGAAACCATT+TGG | - | chr2_2:51302086-51302105 | None:intergenic | 40.0% | |
!! | GCAGCTTTTGAAGATGGTAA+AGG | + | chr2_2:51302235-51302254 | Msa0256510:CDS | 40.0% |
CCTGTTACATCTCATGAACA+AGG | - | chr2_2:51302698-51302717 | None:intergenic | 40.0% | |
CCTTGTTCATGAGATGTAAC+AGG | + | chr2_2:51302695-51302714 | Msa0256510:intron | 40.0% | |
TGTTCATGAGATGTAACAGG+AGG | + | chr2_2:51302698-51302717 | Msa0256510:intron | 40.0% | |
TGTAACAGGAGGAATATACG+GGG | + | chr2_2:51302709-51302728 | Msa0256510:intron | 40.0% | |
!!! | CTATCATAGGCCGTTTTTCT+GGG | + | chr2_2:51302823-51302842 | Msa0256510:intron | 40.0% |
! | TTAGGCTTAACAGGCTTTTC+TGG | + | chr2_2:51303152-51303171 | Msa0256510:intron | 40.0% |
TAGTTAAATAGGCCAGGCTT+AGG | - | chr2_2:51303181-51303200 | None:intergenic | 40.0% | |
CCTGTTTAGTTAAATAGGCC+AGG | - | chr2_2:51303187-51303206 | None:intergenic | 40.0% | |
CCTGGCCTATTTAACTAAAC+AGG | + | chr2_2:51303184-51303203 | Msa0256510:intron | 40.0% | |
GGATTTATGTCCCCGTATTA+GGG | - | chr2_2:51303318-51303337 | None:intergenic | 40.0% | |
TGGATTTATGTCCCCGTATT+AGG | - | chr2_2:51303319-51303338 | None:intergenic | 40.0% | |
TATCTTTGTTCCAGCTCTTG+TGG | - | chr2_2:51303530-51303549 | None:intergenic | 40.0% | |
CAAGAGCTGGAACAAAGATA+TGG | + | chr2_2:51303530-51303549 | Msa0256510:CDS | 40.0% | |
TGGAACAAAGATATGGTGGT+TGG | + | chr2_2:51303537-51303556 | Msa0256510:CDS | 40.0% | |
!! | TAGTATTGGTGTTGACCTGT+CGG | + | chr2_2:51303701-51303720 | Msa0256510:intron | 40.0% |
!! | GTTTCAAGAGCTTTGGAGAT+AGG | + | chr2_2:51303945-51303964 | Msa0256510:CDS | 40.0% |
CCAAAGTCGGAAACAAGATT+TGG | - | chr2_2:51303998-51304017 | None:intergenic | 40.0% | |
! | CCAAATCTTGTTTCCGACTT+TGG | + | chr2_2:51303995-51304014 | Msa0256510:CDS | 40.0% |
TCCTCTCATAAAGCCAAAGT+CGG | - | chr2_2:51304011-51304030 | None:intergenic | 40.0% | |
ATGAGAGGAACATATTCTCC+TGG | + | chr2_2:51304022-51304041 | Msa0256510:CDS | 40.0% | |
ATAACAGTTTCCGAAAGGAG+GGG | - | chr2_2:51304056-51304075 | None:intergenic | 40.0% | |
GTATAACAGTTTCCGAAAGG+AGG | - | chr2_2:51304058-51304077 | None:intergenic | 40.0% | |
CCAGTATAACAGTTTCCGAA+AGG | - | chr2_2:51304061-51304080 | None:intergenic | 40.0% | |
CCTTTCGGAAACTGTTATAC+TGG | + | chr2_2:51304058-51304077 | Msa0256510:CDS | 40.0% | |
ATATTGTGCATAGCAAGGAG+AGG | - | chr2_2:51304100-51304119 | None:intergenic | 40.0% | |
ACAGCATATTGTGCATAGCA+AGG | - | chr2_2:51304105-51304124 | None:intergenic | 40.0% | |
TATGCTGTTGTCACATGCTA+AGG | + | chr2_2:51304117-51304136 | Msa0256510:CDS | 40.0% | |
ATGTTTATCCAGGCAAAGCA+AGG | + | chr2_2:51304240-51304259 | Msa0256510:intron | 40.0% | |
GGTATGTGCAACAATACCAA+TGG | - | chr2_2:51304271-51304290 | None:intergenic | 40.0% | |
TGATAGACAAGCTGCAAACA+GGG | + | chr2_2:51304323-51304342 | Msa0256510:CDS | 40.0% | |
CAGAAGCAAAACTCTTCTCT+TGG | - | chr2_2:51304397-51304416 | None:intergenic | 40.0% | |
! | CAAGAGAAGAGTTTTGCTTC+TGG | + | chr2_2:51304395-51304414 | Msa0256510:intron | 40.0% |
TGTTGCTAGGACCATTTGTA+TGG | - | chr2_2:51304455-51304474 | None:intergenic | 40.0% | |
ATGTCCGTCCCACATAAATT+TGG | + | chr2_2:51304557-51304576 | Msa0256510:intron | 40.0% | |
TCAACTAATAAGTGAGGGTG+TGG | + | chr2_2:51304597-51304616 | Msa0256510:intron | 40.0% | |
! | CAACTAATAAGTGAGGGTGT+GGG | + | chr2_2:51304598-51304617 | Msa0256510:intron | 40.0% |
! | AACTTTTCCTGCTCTTCTGA+TGG | + | chr2_2:51304710-51304729 | Msa0256510:intron | 40.0% |
!! | TTACTAGATCCCCTGGTTTT+TGG | + | chr2_2:51304738-51304757 | Msa0256510:CDS | 40.0% |
TTCTCCTTAGATGAGAACCT+AGG | - | chr2_2:51304807-51304826 | None:intergenic | 40.0% | |
TATTGATGCCAATGAAGTCC+AGG | - | chr2_2:51304848-51304867 | None:intergenic | 40.0% | |
CATTGGCATCAATAACTACG+GGG | + | chr2_2:51304854-51304873 | Msa0256510:CDS | 40.0% | |
GAAGAAGCTCGTCCAATAAA+AGG | + | chr2_2:51304918-51304937 | Msa0256510:CDS | 40.0% | |
ATGAGAGATGGCATTCCAAT+TGG | + | chr2_2:51304960-51304979 | Msa0256510:CDS | 40.0% | |
ATGAGTACCTGATCACCAAT+TGG | - | chr2_2:51304978-51304997 | None:intergenic | 40.0% | |
TTGTGCAGACAGGAATGAAA+TGG | + | chr2_2:51305281-51305300 | Msa0256510:intron | 40.0% | |
AGGATATTCTTCGCTACTCA+AGG | + | chr2_2:51305497-51305516 | Msa0256510:intron | 40.0% | |
CTTCATCATCACTCACCTTA+TGG | - | chr2_2:51305604-51305623 | None:intergenic | 40.0% | |
GACAACTTTGAATGGAACAG+TGG | + | chr2_2:51305755-51305774 | Msa0256510:CDS | 40.0% | |
CTTATAGCTTAACGGAAGCA+CGG | + | chr2_2:51306290-51306309 | Msa0256510:three_prime_UTR | 40.0% | |
!! | AGGAAGTGCTTGTTCCAAAG+AGG | - | chr2_2:51302097-51302116 | None:intergenic | 45.0% |
!! | GAAGGAGCAGCTTTTGAAGA+TGG | + | chr2_2:51302229-51302248 | Msa0256510:CDS | 45.0% |
GATGTATTCAGTCACACACC+AGG | + | chr2_2:51302271-51302290 | Msa0256510:CDS | 45.0% | |
AAAATTTACAGGCCTGAGCC+TGG | + | chr2_2:51302792-51302811 | Msa0256510:intron | 45.0% | |
CCAGAAAAACGGCCTATGAT+AGG | - | chr2_2:51302825-51302844 | None:intergenic | 45.0% | |
!!! | CCTATCATAGGCCGTTTTTC+TGG | + | chr2_2:51302822-51302841 | Msa0256510:intron | 45.0% |
! | TCCAGGCTTTTAAATAGGCC+AGG | - | chr2_2:51302854-51302873 | None:intergenic | 45.0% |
GCCTATTTAAAAGCCTGGAC+TGG | + | chr2_2:51302855-51302874 | Msa0256510:intron | 45.0% | |
! | GCCAGTCCAGGCTTTTAAAT+AGG | - | chr2_2:51302859-51302878 | None:intergenic | 45.0% |
GCCTATTCCCAACCCTAATA+CGG | + | chr2_2:51303303-51303322 | Msa0256510:intron | 45.0% | |
CCTATTCCCAACCCTAATAC+GGG | + | chr2_2:51303304-51303323 | Msa0256510:intron | 45.0% | |
CTATTCCCAACCCTAATACG+GGG | + | chr2_2:51303305-51303324 | Msa0256510:intron | 45.0% | |
TATGTCCCCGTATTAGGGTT+GGG | - | chr2_2:51303313-51303332 | None:intergenic | 45.0% | |
TTATGTCCCCGTATTAGGGT+TGG | - | chr2_2:51303314-51303333 | None:intergenic | 45.0% | |
TACGGGGACATAAATCCAAG+TGG | + | chr2_2:51303321-51303340 | Msa0256510:intron | 45.0% | |
GTTATACCTAAATCCGGGCA+TGG | + | chr2_2:51303452-51303471 | Msa0256510:intron | 45.0% | |
GAGCTGGAACAAAGATATGG+TGG | + | chr2_2:51303533-51303552 | Msa0256510:CDS | 45.0% | |
!! | CAAATGTGTTGGTGTCGTGT+CGG | - | chr2_2:51303651-51303670 | None:intergenic | 45.0% |
!! | TGACCTGTCGGTGTTGTATT+TGG | + | chr2_2:51303713-51303732 | Msa0256510:intron | 45.0% |
AGACCAAATACAACACCGAC+AGG | - | chr2_2:51303719-51303738 | None:intergenic | 45.0% | |
!! | TCCGACTTTGGCTTTATGAG+AGG | + | chr2_2:51304007-51304026 | Msa0256510:CDS | 45.0% |
!! | GTTAGGTGGGAAGTACTGAA+TGG | + | chr2_2:51304217-51304236 | Msa0256510:intron | 45.0% |
TTTATCCAGGCAAAGCAAGG+TGG | + | chr2_2:51304243-51304262 | Msa0256510:intron | 45.0% | |
GTGATAGACAAGCTGCAAAC+AGG | + | chr2_2:51304322-51304341 | Msa0256510:CDS | 45.0% | |
! | AGGGCCTATGCTTTTGTCAT+AGG | + | chr2_2:51304342-51304361 | Msa0256510:CDS | 45.0% |
! | CCAGCCTATGACAAAAGCAT+AGG | - | chr2_2:51304349-51304368 | None:intergenic | 45.0% |
! | CCTATGCTTTTGTCATAGGC+TGG | + | chr2_2:51304346-51304365 | Msa0256510:CDS | 45.0% |
! | AGGGTACTCACCAAAAACCA+GGG | - | chr2_2:51304751-51304770 | None:intergenic | 45.0% |
TAGATGAGAACCTAGGCAAC+TGG | - | chr2_2:51304800-51304819 | None:intergenic | 45.0% | |
GTTGCCTAGGTTCTCATCTA+AGG | + | chr2_2:51304800-51304819 | Msa0256510:CDS | 45.0% | |
CAAACAACTGGGATGAGAGA+TGG | + | chr2_2:51304948-51304967 | Msa0256510:CDS | 45.0% | |
! | TGGCATTCCAATTGGTGATC+AGG | + | chr2_2:51304968-51304987 | Msa0256510:CDS | 45.0% |
TGCTAGACCCTGTAATCTCA+AGG | - | chr2_2:51305172-51305191 | None:intergenic | 45.0% | |
TTCATGAGGTCTCAGCATAC+TGG | - | chr2_2:51305199-51305218 | None:intergenic | 45.0% | |
CTTTGTAGTTCCAAAGGGCA+TGG | + | chr2_2:51305306-51305325 | Msa0256510:intron | 45.0% | |
ACAATCTTCTCCATGCCCTT+TGG | - | chr2_2:51305319-51305338 | None:intergenic | 45.0% | |
TATTCTTCGCTACTCAAGGC+AGG | + | chr2_2:51305501-51305520 | Msa0256510:CDS | 45.0% | |
CAGCTTTGCTTAGAGCCATA+AGG | + | chr2_2:51305586-51305605 | Msa0256510:CDS | 45.0% | |
!! | AGAAAAGGTGCCGATGTAAG+AGG | + | chr2_2:51305710-51305729 | Msa0256510:intron | 45.0% |
TGCCGATGTAAGAGGATACA+TGG | + | chr2_2:51305718-51305737 | Msa0256510:CDS | 45.0% | |
GTTTGGATACTGACCAAACG+CGG | + | chr2_2:51306066-51306085 | Msa0256510:three_prime_UTR | 45.0% | |
TAAAGCTTCAAGTAGCCGCA+GGG | - | chr2_2:51306097-51306116 | None:intergenic | 45.0% | |
TTAAAGCTTCAAGTAGCCGC+AGG | - | chr2_2:51306098-51306117 | None:intergenic | 45.0% | |
!!! | TTTTAATAAATAGTATTAAT+AGG | + | chr2_2:51303121-51303140 | Msa0256510:intron | 5.0% |
ACAGGAGGAATATACGGGGT+AGG | + | chr2_2:51302713-51302732 | Msa0256510:intron | 50.0% | |
CAGGAGGAATATACGGGGTA+GGG | + | chr2_2:51302714-51302733 | Msa0256510:intron | 50.0% | |
AGGAGGAATATACGGGGTAG+GGG | + | chr2_2:51302715-51302734 | Msa0256510:intron | 50.0% | |
!!! | TTTTTTCGTAGGCCAGGCTC+AGG | - | chr2_2:51302776-51302795 | None:intergenic | 50.0% |
AACGGCCTATGATAGGCCAT+AGG | - | chr2_2:51302818-51302837 | None:intergenic | 50.0% | |
! | GCTTTTAAATAGGCCAGGCC+AGG | - | chr2_2:51302849-51302868 | None:intergenic | 50.0% |
GCCTGGCCTATTTAAAAGCC+TGG | + | chr2_2:51302850-51302869 | Msa0256510:intron | 50.0% | |
TGGCCTGAAAGCCTACTTAC+AGG | + | chr2_2:51302875-51302894 | Msa0256510:intron | 50.0% | |
AGGCCTGTAAGTAGGCTTTC+AGG | - | chr2_2:51302881-51302900 | None:intergenic | 50.0% | |
GCCAGCCTATTAGGCTTAAC+AGG | + | chr2_2:51303143-51303162 | Msa0256510:intron | 50.0% | |
GCCTGTTAAGCCTAATAGGC+TGG | - | chr2_2:51303147-51303166 | None:intergenic | 50.0% | |
!! | CTTTTCTGGAAGCCTAAGCC+TGG | + | chr2_2:51303166-51303185 | Msa0256510:intron | 50.0% |
TCGTAGATAGGCCTAGGCTT+AGG | - | chr2_2:51303222-51303241 | None:intergenic | 50.0% | |
CCTGTTTCGTAGATAGGCCT+AGG | - | chr2_2:51303228-51303247 | None:intergenic | 50.0% | |
CCTAGGCCTATCTACGAAAC+AGG | + | chr2_2:51303225-51303244 | Msa0256510:intron | 50.0% | |
ATTAGGGTTGGGAATAGGCC+AGG | - | chr2_2:51303302-51303321 | None:intergenic | 50.0% | |
CCCGTATTAGGGTTGGGAAT+AGG | - | chr2_2:51303307-51303326 | None:intergenic | 50.0% | |
TAGATCAAGCAAGCCATGCC+CGG | - | chr2_2:51303468-51303487 | None:intergenic | 50.0% | |
!! | GTCGTGTCGGTTCTGAAATG+TGG | - | chr2_2:51303638-51303657 | None:intergenic | 50.0% |
CGACACGACACCAACACATT+TGG | + | chr2_2:51303649-51303668 | Msa0256510:intron | 50.0% | |
AAAGGAGGGGAACAATGACC+AGG | - | chr2_2:51304043-51304062 | None:intergenic | 50.0% | |
GGTCATTGTTCCCCTCCTTT+CGG | + | chr2_2:51304043-51304062 | Msa0256510:CDS | 50.0% | |
GCAAAGCAAGGTGGAACCAT+TGG | + | chr2_2:51304252-51304271 | Msa0256510:CDS | 50.0% | |
TTCCTGCTCTTCTGATGGCA+AGG | + | chr2_2:51304715-51304734 | Msa0256510:intron | 50.0% | |
AACCTTGCCATCAGAAGAGC+AGG | - | chr2_2:51304720-51304739 | None:intergenic | 50.0% | |
GGGTACTCACCAAAAACCAG+GGG | - | chr2_2:51304750-51304769 | None:intergenic | 50.0% | |
! | CAGGGTACTCACCAAAAACC+AGG | - | chr2_2:51304752-51304771 | None:intergenic | 50.0% |
GAATAGAGCGCATCTCAGCA+GGG | - | chr2_2:51304770-51304789 | None:intergenic | 50.0% | |
AGAATAGAGCGCATCTCAGC+AGG | - | chr2_2:51304771-51304790 | None:intergenic | 50.0% | |
GCTGAGATGCGCTCTATTCT+CGG | + | chr2_2:51304771-51304790 | Msa0256510:CDS | 50.0% | |
CTGAGATGCGCTCTATTCTC+GGG | + | chr2_2:51304772-51304791 | Msa0256510:CDS | 50.0% | |
TTGGACGAGCTTCTTCGAGA+GGG | - | chr2_2:51304914-51304933 | None:intergenic | 50.0% | |
ATTGGACGAGCTTCTTCGAG+AGG | - | chr2_2:51304915-51304934 | None:intergenic | 50.0% | |
!! | TGGCTCTAAGCAAAGCTGCA+AGG | - | chr2_2:51305584-51305603 | None:intergenic | 50.0% |
! | ACGGAAGCACGGTCAAATAG+AGG | + | chr2_2:51306301-51306320 | Msa0256510:three_prime_UTR | 50.0% |
AGGAATATACGGGGTAGGGG+TGG | + | chr2_2:51302718-51302737 | Msa0256510:intron | 55.0% | |
GGAATATACGGGGTAGGGGT+GGG | + | chr2_2:51302719-51302738 | Msa0256510:intron | 55.0% | |
CCTATGATAGGCCATAGGCC+AGG | - | chr2_2:51302813-51302832 | None:intergenic | 55.0% | |
CCTGGCCTATGGCCTATCAT+AGG | + | chr2_2:51302810-51302829 | Msa0256510:intron | 55.0% | |
!!! | ATAGGCCGTTTTTCTGGGCC+TGG | + | chr2_2:51302828-51302847 | Msa0256510:intron | 55.0% |
GCCTATCTACGAAACAGGCC+AGG | + | chr2_2:51303230-51303249 | Msa0256510:intron | 55.0% | |
GCCTGGCCTGTTTCGTAGAT+AGG | - | chr2_2:51303234-51303253 | None:intergenic | 55.0% | |
AGCAAGCCATGCCCGGATTT+AGG | - | chr2_2:51303461-51303480 | None:intergenic | 55.0% | |
!! | GGGCATGGCTTGCTTGATCT+AGG | + | chr2_2:51303467-51303486 | Msa0256510:CDS | 55.0% |
! | TCAAGACTGGCCACAAGAGC+TGG | + | chr2_2:51303517-51303536 | Msa0256510:CDS | 55.0% |
TGGTTCCACCTTGCTTTGCC+TGG | - | chr2_2:51304251-51304270 | None:intergenic | 55.0% | |
GGCAAGGTTACTAGATCCCC+TGG | + | chr2_2:51304731-51304750 | Msa0256510:intron | 55.0% | |
TTCTCGGGAACCAGTTGCCT+AGG | + | chr2_2:51304787-51304806 | Msa0256510:CDS | 55.0% | |
! | GACACTTCTAAGAGCCAGCC+TGG | + | chr2_2:51304827-51304846 | Msa0256510:CDS | 55.0% |
AGAGCCAGCCTGGACTTCAT+TGG | + | chr2_2:51304837-51304856 | Msa0256510:CDS | 55.0% | |
GATGCCAATGAAGTCCAGGC+TGG | - | chr2_2:51304844-51304863 | None:intergenic | 55.0% | |
CTACGGGGCTCTCTATGTCA+AGG | + | chr2_2:51304869-51304888 | Msa0256510:CDS | 55.0% | |
CTTCGAGAGGGCAAGTAGAG+AGG | - | chr2_2:51304902-51304921 | None:intergenic | 55.0% | |
CCAAACGCGGTATAACCCTG+CGG | + | chr2_2:51306079-51306098 | Msa0256510:three_prime_UTR | 55.0% | |
TACGGGGTAGGGGTGGGAAT+AGG | + | chr2_2:51302725-51302744 | Msa0256510:intron | 60.0% | |
TATCAAAGCCTGGCCTGGCC+TGG | - | chr2_2:51302751-51302770 | None:intergenic | 60.0% | |
! | AGGCCAGGCCAGGCTTTGAT+AGG | + | chr2_2:51302750-51302769 | Msa0256510:intron | 60.0% |
AGGCCTATCAAAGCCTGGCC+TGG | - | chr2_2:51302756-51302775 | None:intergenic | 60.0% | |
GGCTCAGGCCTATCAAAGCC+TGG | - | chr2_2:51302761-51302780 | None:intergenic | 60.0% | |
! | GGCTTTGATAGGCCTGAGCC+TGG | + | chr2_2:51302761-51302780 | Msa0256510:intron | 60.0% |
ATAGGCCATAGGCCAGGCTC+AGG | - | chr2_2:51302807-51302826 | None:intergenic | 60.0% | |
CCAGGCCAGGCCCAGAAAAA+CGG | - | chr2_2:51302836-51302855 | None:intergenic | 60.0% | |
GTAGGCTTTCAGGCCAGTCC+AGG | - | chr2_2:51302871-51302890 | None:intergenic | 60.0% | |
TCTACGAAACAGGCCAGGCC+AGG | + | chr2_2:51303235-51303254 | Msa0256510:intron | 60.0% | |
CCGCAGGGTTATACCGCGTT+TGG | - | chr2_2:51306082-51306101 | None:intergenic | 60.0% | |
GGTAGGGGTGGGAATAGGCC+AGG | + | chr2_2:51302730-51302749 | Msa0256510:intron | 65.0% | |
ACAGGCCTGAGCCTGGCCTA+TGG | + | chr2_2:51302799-51302818 | Msa0256510:intron | 65.0% | |
!! | CCGTTTTTCTGGGCCTGGCC+TGG | + | chr2_2:51302833-51302852 | Msa0256510:intron | 65.0% |
!!! | TGTTTTGGCCTGGCCTGGCC+TGG | - | chr2_2:51303251-51303270 | None:intergenic | 65.0% |
AGGCCAGGCCAGGCCAAAAC+AGG | + | chr2_2:51303250-51303269 | Msa0256510:intron | 65.0% | |
!!! | TGGCCTGTTTTGGCCTGGCC+TGG | - | chr2_2:51303256-51303275 | None:intergenic | 65.0% |
AGGCCAGGCCAAAACAGGCC+AGG | + | chr2_2:51303255-51303274 | Msa0256510:intron | 65.0% | |
GCCAAAACAGGCCAGGCCGT+AGG | + | chr2_2:51303262-51303281 | Msa0256510:intron | 65.0% | |
! | GCCTACGGCCTGGCCTGTTT+TGG | - | chr2_2:51303266-51303285 | None:intergenic | 65.0% |
ATAGGCCAGGCCGGCCTACA+GGG | - | chr2_2:51303289-51303308 | None:intergenic | 65.0% | |
AATAGGCCAGGCCGGCCTAC+AGG | - | chr2_2:51303290-51303309 | None:intergenic | 65.0% | |
GGGTTGGGAATAGGCCAGGC+CGG | - | chr2_2:51303298-51303317 | None:intergenic | 65.0% | |
GGGTGGGAATAGGCCAGGCC+AGG | + | chr2_2:51302735-51302754 | Msa0256510:intron | 70.0% | |
GGAATAGGCCAGGCCAGGCC+AGG | + | chr2_2:51302740-51302759 | Msa0256510:intron | 70.0% | |
GAAACAGGCCAGGCCAGGCC+AGG | + | chr2_2:51303240-51303259 | Msa0256510:intron | 70.0% | |
!!! | CGGCCTGGCCTGTTTTGGCC+TGG | - | chr2_2:51303261-51303280 | None:intergenic | 70.0% |
TAGGCCAGGCCGGCCTACAG+GGG | - | chr2_2:51303288-51303307 | None:intergenic | 70.0% | |
GCCAGGCCGTAGGCCCCTGT+AGG | + | chr2_2:51303272-51303291 | Msa0256510:intron | 75.0% | |
GCCTACAGGGGCCTACGGCC+TGG | - | chr2_2:51303276-51303295 | None:intergenic | 75.0% | |
GGCCGTAGGCCCCTGTAGGC+CGG | + | chr2_2:51303276-51303295 | Msa0256510:intron | 75.0% | |
GGCCGGCCTACAGGGGCCTA+CGG | - | chr2_2:51303281-51303300 | None:intergenic | 75.0% | |
TAGGCCCCTGTAGGCCGGCC+TGG | + | chr2_2:51303281-51303300 | Msa0256510:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_2 | gene | 51301831 | 51306416 | 51301831 | ID=Msa0256510;Name=Msa0256510 |
chr2_2 | mRNA | 51301831 | 51306416 | 51301831 | ID=Msa0256510-mRNA-1;Parent=Msa0256510;Name=Msa0256510-mRNA-1;_AED=0.21;_eAED=0.21;_QI=141|0.8|0.81|1|1|1|11|467|505 |
chr2_2 | exon | 51301831 | 51302124 | 51301831 | ID=Msa0256510-mRNA-1:exon:15512;Parent=Msa0256510-mRNA-1 |
chr2_2 | exon | 51302226 | 51302292 | 51302226 | ID=Msa0256510-mRNA-1:exon:15513;Parent=Msa0256510-mRNA-1 |
chr2_2 | exon | 51302384 | 51302442 | 51302384 | ID=Msa0256510-mRNA-1:exon:15514;Parent=Msa0256510-mRNA-1 |
chr2_2 | exon | 51302554 | 51302629 | 51302554 | ID=Msa0256510-mRNA-1:exon:15515;Parent=Msa0256510-mRNA-1 |
chr2_2 | exon | 51303453 | 51303576 | 51303453 | ID=Msa0256510-mRNA-1:exon:15516;Parent=Msa0256510-mRNA-1 |
chr2_2 | exon | 51303916 | 51304168 | 51303916 | ID=Msa0256510-mRNA-1:exon:15517;Parent=Msa0256510-mRNA-1 |
chr2_2 | exon | 51304252 | 51304367 | 51304252 | ID=Msa0256510-mRNA-1:exon:15518;Parent=Msa0256510-mRNA-1 |
chr2_2 | exon | 51304737 | 51304989 | 51304737 | ID=Msa0256510-mRNA-1:exon:15519;Parent=Msa0256510-mRNA-1 |
chr2_2 | exon | 51305322 | 51305391 | 51305322 | ID=Msa0256510-mRNA-1:exon:15520;Parent=Msa0256510-mRNA-1 |
chr2_2 | exon | 51305499 | 51305607 | 51305499 | ID=Msa0256510-mRNA-1:exon:15521;Parent=Msa0256510-mRNA-1 |
chr2_2 | exon | 51305712 | 51306416 | 51305712 | ID=Msa0256510-mRNA-1:exon:15522;Parent=Msa0256510-mRNA-1 |
chr2_2 | five_prime_UTR | 51301831 | 51301971 | 51301831 | ID=Msa0256510-mRNA-1:five_prime_utr;Parent=Msa0256510-mRNA-1 |
chr2_2 | CDS | 51301972 | 51302124 | 51301972 | ID=Msa0256510-mRNA-1:cds;Parent=Msa0256510-mRNA-1 |
chr2_2 | CDS | 51302226 | 51302292 | 51302226 | ID=Msa0256510-mRNA-1:cds;Parent=Msa0256510-mRNA-1 |
chr2_2 | CDS | 51302384 | 51302442 | 51302384 | ID=Msa0256510-mRNA-1:cds;Parent=Msa0256510-mRNA-1 |
chr2_2 | CDS | 51302554 | 51302629 | 51302554 | ID=Msa0256510-mRNA-1:cds;Parent=Msa0256510-mRNA-1 |
chr2_2 | CDS | 51303453 | 51303576 | 51303453 | ID=Msa0256510-mRNA-1:cds;Parent=Msa0256510-mRNA-1 |
chr2_2 | CDS | 51303916 | 51304168 | 51303916 | ID=Msa0256510-mRNA-1:cds;Parent=Msa0256510-mRNA-1 |
chr2_2 | CDS | 51304252 | 51304367 | 51304252 | ID=Msa0256510-mRNA-1:cds;Parent=Msa0256510-mRNA-1 |
chr2_2 | CDS | 51304737 | 51304989 | 51304737 | ID=Msa0256510-mRNA-1:cds;Parent=Msa0256510-mRNA-1 |
chr2_2 | CDS | 51305322 | 51305391 | 51305322 | ID=Msa0256510-mRNA-1:cds;Parent=Msa0256510-mRNA-1 |
chr2_2 | CDS | 51305499 | 51305607 | 51305499 | ID=Msa0256510-mRNA-1:cds;Parent=Msa0256510-mRNA-1 |
chr2_2 | CDS | 51305712 | 51305949 | 51305712 | ID=Msa0256510-mRNA-1:cds;Parent=Msa0256510-mRNA-1 |
chr2_2 | three_prime_UTR | 51305950 | 51306416 | 51305950 | ID=Msa0256510-mRNA-1:three_prime_utr;Parent=Msa0256510-mRNA-1 |
Gene Sequence |
Protein sequence |