AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0256510


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0256510 MtrunA17_Chr2g0317841 88.847 529 35 3 1 505 1 529 0.0 966
Msa0256510 MtrunA17_Chr2g0317821 85.472 530 52 4 1 505 1 530 0.0 932
Msa0256510 MtrunA17_Chr4g0074551 48.960 529 229 7 10 503 31 553 2.02e-178 513
Msa0256510 MtrunA17_Chr2g0288071 49.503 503 228 5 3 479 38 540 1.00e-173 500
Msa0256510 MtrunA17_Chr2g0288021 49.213 508 231 5 8 488 9 516 6.93e-171 492
Msa0256510 MtrunA17_Chr4g0074561 49.894 473 209 5 37 481 40 512 3.08e-164 475
Msa0256510 MtrunA17_Chr4g0043091 44.800 500 240 7 10 479 8 501 1.20e-147 432
Msa0256510 MtrunA17_Chr4g0033311 44.553 514 245 8 6 483 8 517 5.25e-143 421
Msa0256510 MtrunA17_Chr6g0482071 43.141 503 247 9 12 479 13 511 4.46e-139 411
Msa0256510 MtrunA17_Chr6g0482951 41.304 506 253 6 6 479 17 510 6.01e-139 410
Msa0256510 MtrunA17_Chr6g0482941 42.147 503 253 6 6 479 17 510 1.92e-138 409
Msa0256510 MtrunA17_Chr4g0042171 46.042 480 222 8 32 479 24 498 3.67e-138 408
Msa0256510 MtrunA17_Chr6g0482081 42.315 501 258 6 10 479 11 511 9.91e-138 407
Msa0256510 MtrunA17_Chr6g0482131 43.648 488 238 9 24 479 28 510 2.75e-137 406
Msa0256510 MtrunA17_Chr3g0088441 43.687 499 245 8 16 483 23 516 1.16e-136 405
Msa0256510 MtrunA17_Chr4g0033271 42.360 517 256 10 3 482 1 512 2.87e-136 403
Msa0256510 MtrunA17_Chr3g0090131 43.943 487 233 8 31 490 20 493 5.74e-136 402
Msa0256510 MtrunA17_Chr3g0090111 42.799 493 245 7 23 490 10 490 2.07e-135 400
Msa0256510 MtrunA17_Chr2g0329191 42.062 485 237 7 30 479 32 507 2.30e-135 401
Msa0256510 MtrunA17_Chr4g0033191 43.400 500 244 8 17 485 32 523 1.82e-134 399
Msa0256510 MtrunA17_Chr2g0329201 42.063 504 250 8 7 479 13 505 4.53e-132 392
Msa0256510 MtrunA17_Chr2g0329321 41.165 498 258 8 1 479 5 486 1.23e-131 390
Msa0256510 MtrunA17_Chr4g0033201 42.323 508 254 9 10 482 10 513 1.71e-131 391
Msa0256510 MtrunA17_Chr4g0033401 42.276 492 247 8 32 491 34 520 7.47e-131 390
Msa0256510 MtrunA17_Chr7g0242691 42.171 479 248 7 32 488 31 502 1.17e-130 389
Msa0256510 MtrunA17_Chr4g0006971 43.333 480 245 6 30 488 25 498 2.33e-130 389
Msa0256510 MtrunA17_Chr4g0033331 43.542 480 234 9 32 479 39 513 2.97e-130 388
Msa0256510 MtrunA17_Chr4g0033321 41.870 492 249 7 32 491 33 519 6.73e-130 387
Msa0256510 MtrunA17_Chr4g0010501 42.050 478 238 8 32 479 24 492 8.85e-127 379
Msa0256510 MtrunA17_Chr7g0242681 41.079 482 248 8 32 488 38 508 1.22e-125 377
Msa0256510 MtrunA17_Chr3g0087261 40.625 480 246 7 31 479 36 507 7.07e-125 374
Msa0256510 MtrunA17_Chr1g0195611 39.919 496 267 8 9 482 4 490 4.93e-124 372
Msa0256510 MtrunA17_Chr5g0430451 42.917 480 220 8 32 479 39 496 1.21e-123 370
Msa0256510 MtrunA17_Chr4g0033341 40.784 510 264 9 1 479 39 541 8.42e-123 370
Msa0256510 MtrunA17_Chr3g0087271 40.583 515 263 8 1 479 1 508 1.50e-121 365
Msa0256510 MtrunA17_Chr4g0033261 42.227 476 222 8 32 479 41 491 3.67e-119 359
Msa0256510 MtrunA17_Chr5g0428831 39.034 497 271 9 9 482 4 491 7.36e-119 359
Msa0256510 MtrunA17_Chr4g0033231 40.966 476 228 8 32 479 41 491 1.46e-117 355
Msa0256510 MtrunA17_Chr4g0006131 39.078 499 238 10 22 482 32 502 2.90e-116 352
Msa0256510 MtrunA17_Chr4g0006111 38.677 499 245 8 22 484 55 528 1.13e-113 346
Msa0256510 MtrunA17_Chr5g0418871 48.299 294 139 3 53 333 4 297 7.62e-97 296
Msa0256510 MtrunA17_Chr1g0195641 40.476 378 202 6 34 391 29 403 2.58e-93 290
Msa0256510 MtrunA17_Chr7g0234091 36.975 476 253 9 33 480 76 532 3.47e-93 293
Msa0256510 MtrunA17_Chr7g0234131 36.975 476 252 9 33 479 76 532 4.20e-92 290
Msa0256510 MtrunA17_Chr2g0301231 39.329 417 190 7 99 479 1 390 8.95e-91 282
Msa0256510 MtrunA17_Chr7g0234111 36.229 472 260 9 33 479 76 531 5.30e-89 282
Msa0256510 MtrunA17_Chr3g0087201 39.104 335 183 6 160 480 16 343 4.81e-78 248
Msa0256510 MtrunA17_Chr7g0230651 36.769 359 198 7 87 426 27 375 3.00e-68 224
Msa0256510 MtrunA17_Chr7g0227561 38.976 254 134 4 34 285 48 282 1.88e-53 182
Msa0256510 MtrunA17_Chr7g0236731 43.627 204 110 2 131 334 54 252 6.92e-51 175
Msa0256510 MtrunA17_Chr3g0087191 44.379 169 73 3 6 159 2 164 1.11e-39 141
Msa0256510 MtrunA17_Chr4g0068871 25.701 428 240 13 95 498 183 556 1.63e-24 107
Msa0256510 MtrunA17_Chr5g0418861 50.000 84 40 2 399 480 8 91 2.67e-22 91.3
Msa0256510 MtrunA17_Chr8g0352881 43.564 101 56 1 235 335 51 150 3.88e-21 90.1
Msa0256510 MtrunA17_Chr8g0352881 33.117 154 70 7 41 190 7 131 5.03e-11 61.2
Msa0256510 MtrunA17_Chr2g0288031 58.333 60 25 0 169 228 4 63 3.40e-19 81.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0256510 AT1G61820.1 46.214 515 247 7 3 490 1 512 8.79e-165 476
Msa0256510 AT1G61810.1 46.758 509 241 7 10 488 8 516 2.37e-164 476
Msa0256510 AT4G21760.1 47.887 497 235 8 2 479 20 511 3.87e-163 473
Msa0256510 AT4G21760.2 47.140 507 234 8 2 479 20 521 1.94e-162 472
Msa0256510 AT1G61810.3 47.166 494 231 7 3 466 1 494 3.05e-159 463
Msa0256510 AT1G26560.1 45.738 481 232 9 31 483 31 510 1.69e-144 425
Msa0256510 AT3G18080.1 42.589 479 242 4 32 483 39 511 5.63e-137 405
Msa0256510 AT1G02850.2 45.648 471 226 9 33 482 27 488 1.93e-136 404
Msa0256510 AT2G44480.1 41.649 485 253 6 28 484 31 513 1.60e-133 397
Msa0256510 AT2G44480.3 41.649 485 253 6 28 484 62 544 5.94e-133 396
Msa0256510 AT1G61810.5 46.154 416 198 5 99 488 1 416 2.26e-132 390
Msa0256510 AT1G02850.5 43.725 494 225 10 33 482 27 511 6.60e-132 393
Msa0256510 AT3G18070.1 41.614 471 248 5 32 479 30 496 7.48e-132 392
Msa0256510 AT5G54570.1 43.595 484 241 10 26 479 24 505 1.00e-130 390
Msa0256510 AT3G18070.3 41.189 471 244 5 32 479 30 490 1.63e-130 388
Msa0256510 AT1G02850.4 43.636 495 225 11 33 482 27 512 4.16e-130 388
Msa0256510 AT1G61810.4 46.062 419 196 7 3 391 1 419 1.18e-129 384
Msa0256510 AT4G27830.1 42.424 495 245 9 15 482 6 487 8.86e-128 382
Msa0256510 AT2G25630.1 42.944 496 250 11 4 480 3 484 2.33e-126 377
Msa0256510 AT5G44640.1 41.107 506 261 10 5 480 4 502 2.46e-125 375
Msa0256510 AT2G44450.1 42.562 484 242 9 31 485 30 506 3.09e-125 375
Msa0256510 AT1G61820.3 46.866 367 182 3 131 484 4 370 1.50e-124 369
Msa0256510 AT1G02850.1 43.524 471 209 10 33 482 27 461 1.61e-123 370
Msa0256510 AT4G27820.1 43.243 481 229 11 30 482 21 485 4.38e-123 370
Msa0256510 AT5G42260.1 40.873 504 260 11 3 475 1 497 3.64e-122 367
Msa0256510 AT5G36890.1 40.779 488 245 9 33 490 17 490 9.96e-122 366
Msa0256510 AT5G36890.2 41.509 477 235 9 33 479 17 479 1.63e-121 365
Msa0256510 AT5G24550.1 42.204 481 248 8 32 482 32 512 9.31e-121 365
Msa0256510 AT3G62750.1 41.566 498 239 12 12 482 4 476 3.17e-120 362
Msa0256510 AT3G60140.1 40.530 528 271 12 1 493 1 520 8.34e-120 363
Msa0256510 AT3G62750.2 41.566 498 239 12 12 482 30 502 1.13e-119 362
Msa0256510 AT1G51470.1 41.189 488 244 10 20 479 37 509 1.05e-118 358
Msa0256510 AT1G47600.2 40.862 487 246 10 20 479 37 508 1.26e-118 358
Msa0256510 AT1G47600.1 40.779 488 246 10 20 479 37 509 1.68e-118 358
Msa0256510 AT4G22100.1 39.841 502 262 10 8 484 1 487 2.15e-118 358
Msa0256510 AT3G60130.1 40.041 492 258 10 26 487 24 508 4.85e-117 354
Msa0256510 AT1G60090.2 38.402 513 274 9 15 499 7 505 1.07e-116 353
Msa0256510 AT1G60090.1 38.372 516 277 11 15 499 7 512 5.04e-115 349
Msa0256510 AT1G45191.4 40.161 498 257 10 8 479 1 483 9.96e-115 348
Msa0256510 AT2G44470.3 38.703 509 280 10 1 480 1 506 2.13e-114 350
Msa0256510 AT5G24540.1 42.204 481 248 8 32 482 32 512 1.74e-113 346
Msa0256510 AT1G45191.2 39.479 499 265 9 8 479 1 489 6.44e-113 344
Msa0256510 AT1G45191.6 39.364 503 265 10 8 479 1 494 3.89e-112 342
Msa0256510 AT2G44480.2 41.646 413 212 5 99 484 1 411 6.46e-112 338
Msa0256510 AT2G44460.1 40.430 512 266 11 1 480 1 505 6.14e-110 338
Msa0256510 AT1G45191.1 39.029 515 262 10 8 479 1 506 1.39e-109 336
Msa0256510 AT3G62740.1 39.608 510 249 15 3 482 1 481 2.18e-109 334
Msa0256510 AT2G44490.1 38.521 514 281 10 19 499 1 512 2.80e-109 336
Msa0256510 AT5G54570.3 41.628 430 221 8 26 427 24 451 4.06e-107 327
Msa0256510 AT2G32860.2 39.300 486 259 10 29 481 91 573 9.20e-106 328
Msa0256510 AT3G21370.1 40.456 482 250 15 32 479 33 511 1.13e-105 326
Msa0256510 AT3G60120.1 39.228 492 265 10 19 479 1 489 1.43e-105 326
Msa0256510 AT5G54570.2 42.927 410 203 9 99 479 1 408 1.55e-105 322
Msa0256510 AT2G32860.1 39.220 487 257 11 29 481 91 572 4.18e-105 327
Msa0256510 AT1G02850.3 43.500 400 183 7 33 391 27 424 4.35e-105 321
Msa0256510 AT5G28510.1 37.903 496 271 11 30 490 37 530 4.56e-104 322
Msa0256510 AT3G09260.1 39.175 485 255 14 30 480 33 511 7.47e-104 321
Msa0256510 AT1G75940.1 39.798 495 245 13 32 483 37 521 1.47e-103 320
Msa0256510 AT5G25980.2 38.200 500 270 12 30 497 48 540 2.41e-102 318
Msa0256510 AT4G27830.2 41.363 411 202 8 99 482 1 399 2.70e-101 311
Msa0256510 AT1G66280.1 36.944 517 281 14 1 479 1 510 1.12e-100 313
Msa0256510 AT3G62750.4 40.632 443 213 11 12 429 30 447 1.18e-99 308
Msa0256510 AT3G18070.4 44.582 323 165 3 32 342 30 350 4.77e-99 304
Msa0256510 AT4G27820.2 42.476 412 197 10 99 482 1 400 7.86e-99 305
Msa0256510 AT4G27820.3 42.476 412 197 10 99 482 1 400 7.86e-99 305
Msa0256510 AT1G61810.2 49.828 291 129 4 10 283 8 298 3.76e-98 299
Msa0256510 AT5G26000.1 37.067 491 273 10 32 491 38 523 7.41e-98 306
Msa0256510 AT3G60130.3 39.806 412 223 8 94 487 41 445 4.89e-97 301
Msa0256510 AT1G66270.1 37.190 484 263 11 30 479 34 510 1.55e-96 302
Msa0256510 AT1G52400.3 37.550 498 270 14 28 490 35 526 3.09e-96 301
Msa0256510 AT1G52400.1 37.550 498 270 14 28 490 35 526 3.09e-96 301
Msa0256510 AT1G66270.2 37.137 482 264 11 30 479 34 508 1.26e-95 300
Msa0256510 AT3G03640.1 37.630 481 261 12 34 479 36 512 1.35e-95 300
Msa0256510 AT3G62750.6 40.146 411 199 10 99 482 1 391 1.70e-94 293
Msa0256510 AT3G62750.5 40.146 411 199 10 99 482 1 391 1.70e-94 293
Msa0256510 AT3G60130.2 38.771 423 223 9 94 487 41 456 1.02e-93 293
Msa0256510 AT5G24540.2 40.662 423 223 6 32 426 32 454 3.86e-93 291
Msa0256510 AT1G60270.1 42.857 343 180 4 8 338 1 339 2.06e-92 286
Msa0256510 AT3G62740.2 39.381 452 217 14 3 426 1 423 2.39e-92 288
Msa0256510 AT2G44480.4 42.857 329 169 4 27 337 61 388 2.87e-92 286
Msa0256510 AT2G44470.1 35.982 453 260 8 1 426 1 450 1.04e-89 282
Msa0256510 AT3G60140.2 39.286 420 218 9 1 391 1 412 3.69e-89 281
Msa0256510 AT3G62750.7 44.248 339 158 7 12 335 4 326 3.42e-87 273
Msa0256510 AT3G62750.8 44.248 339 158 7 12 335 4 326 3.42e-87 273
Msa0256510 AT2G44450.2 41.160 362 192 6 138 485 1 355 1.77e-86 270
Msa0256510 AT3G62750.3 44.248 339 158 7 12 335 30 352 6.08e-86 272
Msa0256510 AT1G45191.3 41.543 337 177 4 8 328 1 333 7.05e-86 271
Msa0256510 AT1G45191.5 41.543 337 177 4 8 328 1 333 7.54e-86 271
Msa0256510 AT5G25980.3 37.939 427 229 10 30 427 48 467 1.62e-85 271
Msa0256510 AT5G25980.1 37.939 427 229 10 30 427 48 467 1.62e-85 271
Msa0256510 AT3G18070.2 39.329 328 186 2 163 479 94 419 2.57e-85 270
Msa0256510 AT3G18070.2 54.098 61 28 0 32 92 30 90 5.04e-15 77.4
Msa0256510 AT5G26000.2 36.557 424 236 8 32 427 38 456 2.60e-81 260
Msa0256510 AT2G44470.2 39.420 345 190 6 1 329 1 342 8.21e-81 257
Msa0256510 AT3G18070.7 38.835 309 176 2 182 479 1 307 1.30e-78 249
Msa0256510 AT2G44460.2 41.047 363 192 7 136 480 1 359 1.71e-76 247
Msa0256510 AT1G52400.2 36.111 432 237 12 28 426 35 460 3.93e-76 247
Msa0256510 AT2G44480.5 39.672 305 169 4 193 484 5 307 2.38e-74 238
Msa0256510 AT5G48375.1 34.763 443 202 13 30 448 36 415 9.57e-67 222
Msa0256510 AT1G60270.2 41.667 252 135 2 99 338 1 252 5.36e-66 215
Msa0256510 AT1G51490.1 38.608 316 153 11 41 333 29 326 1.45e-60 205
Msa0256510 AT3G18070.5 38.333 240 137 1 163 391 94 333 1.90e-57 194
Msa0256510 AT3G18070.5 54.098 61 28 0 32 92 30 90 3.17e-15 77.4
Msa0256510 AT5G16580.1 36.949 295 156 6 157 437 21 299 7.19e-51 176
Msa0256510 AT3G18070.6 37.557 221 127 1 182 391 1 221 8.55e-51 173
Msa0256510 AT3G06510.1 26.406 409 224 13 94 481 159 511 1.09e-24 108
Msa0256510 AT3G06510.2 25.635 433 231 14 94 481 159 545 1.42e-22 102

Find 131 sgRNAs with CRISPR-Local

Find 341 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCAACAACATATTTATTTA+AGG 0.120355 2_2:+51306154 Msa0256510:three_prime_UTR
CAACATACTATTTATTATTA+AGG 0.138606 2_2:+51306003 Msa0256510:three_prime_UTR
AGTAGTGAATTTACTGAATT+AGG 0.142690 2_2:-51303568 None:intergenic
GATCACTCAGAACTTATTTA+AGG 0.181353 2_2:+51306379 Msa0256510:three_prime_UTR
AATTTGCGAGAAACGTTATT+TGG 0.192129 2_2:+51306116 Msa0256510:three_prime_UTR
TTCCCAAATGGTTTCCTCTT+TGG 0.209304 2_2:+51302080 Msa0256510:CDS
CCCATGTATATTACAGAAAA+TGG 0.218730 2_2:+51305370 Msa0256510:CDS
TATCAATTATTTATGATATA+TGG 0.220858 2_2:-51301908 None:intergenic
CTAACAACTTACAATATATA+TGG 0.250587 2_2:+51301884 Msa0256510:five_prime_UTR
CTTGCTCAACTCTTCTATAT+TGG 0.251613 2_2:-51305888 None:intergenic
TGATCATTATCATCGCTATT+TGG 0.257693 2_2:+51302421 Msa0256510:CDS
CCTTTCGGAAACTGTTATAC+TGG 0.286810 2_2:+51304058 Msa0256510:CDS
TTTATACCGCAAACAATATC+AGG 0.297815 2_2:+51304147 Msa0256510:CDS
AGCAAGCCATGCCCGGATTT+AGG 0.305856 2_2:-51303458 None:intergenic
GTAGTGAATTTACTGAATTA+GGG 0.307506 2_2:-51303567 None:intergenic
CATATATATTGTAAGTTGTT+AGG 0.310482 2_2:-51301883 None:intergenic
ATAAGTGATGTATGTTTATA+CGG 0.313177 2_2:+51306207 Msa0256510:three_prime_UTR
TGGAGATAGGGTTAAGTATT+GGG 0.316186 2_2:+51303958 Msa0256510:CDS
GAAGAAGCTCGTCCAATAAA+AGG 0.321375 2_2:+51304918 Msa0256510:CDS
GAAATTTGTTTCAAGAGCTT+TGG 0.322542 2_2:+51303938 Msa0256510:CDS
CCAAATCTTGTTTCCGACTT+TGG 0.324430 2_2:+51303995 Msa0256510:CDS
ATGGTAAAGGTTTAAGCAAC+TGG 0.328340 2_2:+51302248 Msa0256510:CDS
TAACATGGGTTGATTCTGTT+TGG 0.337767 2_2:+51306049 Msa0256510:three_prime_UTR
GTTTCAAGAGCTTTGGAGAT+AGG 0.340257 2_2:+51303945 Msa0256510:CDS
CCTCTTAACTTATAGCTTAA+CGG 0.343612 2_2:+51306282 Msa0256510:three_prime_UTR
AACATACTATTTATTATTAA+GGG 0.347502 2_2:+51306004 Msa0256510:three_prime_UTR
TTCTTAGTTATACCTAAATC+CGG 0.360539 2_2:+51303446 Msa0256510:intron
ACCTTAAATAAATATGTTGT+TGG 0.361049 2_2:-51306155 None:intergenic
GGTCATTGTTCCCCTCCTTT+CGG 0.369030 2_2:+51304043 Msa0256510:CDS
TTCCAAAGAGGAAACCATTT+GGG 0.373702 2_2:-51302082 None:intergenic
GTTGCCTAGGTTCTCATCTA+AGG 0.375503 2_2:+51304800 Msa0256510:CDS
GTGATAGACAAGCTGCAAAC+AGG 0.383393 2_2:+51304322 Msa0256510:CDS
CGTTGTTTGACAACTTTGAA+TGG 0.384234 2_2:+51305747 Msa0256510:CDS
CAGCTTTGCTTAGAGCCATA+AGG 0.398294 2_2:+51305586 Msa0256510:CDS
GCTGAGATGCGCTCTATTCT+CGG 0.403127 2_2:+51304771 Msa0256510:CDS
AGAATAGAGCGCATCTCAGC+AGG 0.403695 2_2:-51304768 None:intergenic
AACAAGATTTGGCTCATTCA+TGG 0.403887 2_2:-51303984 None:intergenic
CCAAAGTCGGAAACAAGATT+TGG 0.405098 2_2:-51303995 None:intergenic
TCTAAGAGGTTCATACATAA+AGG 0.417000 2_2:-51304289 None:intergenic
TTGTTACCTGATATTGTTTG+CGG 0.421555 2_2:-51304153 None:intergenic
TTGGAGATAGGGTTAAGTAT+TGG 0.424221 2_2:+51303957 Msa0256510:CDS
CCGTTAAGCTATAAGTTAAG+AGG 0.428233 2_2:-51306282 None:intergenic
TCAAGACTGGCCACAAGAGC+TGG 0.433690 2_2:+51303517 Msa0256510:CDS
GTTCCAAAGAGGAAACCATT+TGG 0.436217 2_2:-51302083 None:intergenic
TGGCATTCCAATTGGTGATC+AGG 0.439107 2_2:+51304968 Msa0256510:CDS
AAAATTTGGACTTTATTATG+TGG 0.449703 2_2:+51305787 Msa0256510:CDS
TTTCAAGAGCTTTGGAGATA+GGG 0.450898 2_2:+51303946 Msa0256510:CDS
GGGCATGGCTTGCTTGATCT+AGG 0.457956 2_2:+51303467 Msa0256510:CDS
ATTTACTACATGATTTCAAA+CGG 0.464093 2_2:+51305538 Msa0256510:CDS
TCACATTCTTCATCTCTAAG+AGG 0.467731 2_2:-51304303 None:intergenic
CAAGAGCTGGAACAAAGATA+TGG 0.472569 2_2:+51303530 Msa0256510:CDS
ACGGAAGCACGGTCAAATAG+AGG 0.473492 2_2:+51306301 Msa0256510:three_prime_UTR
AGAGCCAGCCTGGACTTCAT+TGG 0.477032 2_2:+51304837 Msa0256510:CDS
CCGCAGGGTTATACCGCGTT+TGG 0.478531 2_2:-51306079 None:intergenic
TATCTTTGTTCCAGCTCTTG+TGG 0.483806 2_2:-51303527 None:intergenic
AATAGATCTCAATTCCCAAA+TGG 0.489663 2_2:+51302068 Msa0256510:CDS
GGCAAGGTTACTAGATCCCC+TGG 0.491073 2_2:+51304731 Msa0256510:intron
TAACAACTTACAATATATAT+GGG 0.493274 2_2:+51301885 Msa0256510:five_prime_UTR
ATGAGTACCTGATCACCAAT+TGG 0.493854 2_2:-51304975 None:intergenic
AACCACTGAACAGAAAGTTT+AGG 0.495370 2_2:-51305833 None:intergenic
TTCATTGGCATCAATAACTA+CGG 0.499196 2_2:+51304852 Msa0256510:CDS
TAGATGAGAACCTAGGCAAC+TGG 0.500134 2_2:-51304797 None:intergenic
TTCCTAAACTTTCTGTTCAG+TGG 0.500829 2_2:+51305831 Msa0256510:CDS
TCAAATGATAACTTAGACAA+CGG 0.501685 2_2:-51305939 None:intergenic
TGATGATGAATTGTCACAAA+TGG 0.504920 2_2:-51303497 None:intergenic
GCAAAGCAAGGTGGAACCAT+TGG 0.506834 2_2:+51304252 Msa0256510:CDS
CTGAGATGCGCTCTATTCTC+GGG 0.509863 2_2:+51304772 Msa0256510:CDS
TAGATCAAGCAAGCCATGCC+CGG 0.515688 2_2:-51303465 None:intergenic
AAGTATATATACTTGGTAAG+AGG 0.516534 2_2:-51302114 None:intergenic
GACACTTCTAAGAGCCAGCC+TGG 0.520389 2_2:+51304827 Msa0256510:CDS
ATCAAATTGATGTCATCACT+TGG 0.520414 2_2:+51302560 Msa0256510:CDS
TCATTGGCATCAATAACTAC+GGG 0.523195 2_2:+51304853 Msa0256510:CDS
ATGAGAGGAACATATTCTCC+TGG 0.525155 2_2:+51304022 Msa0256510:CDS
TACCATGTATCCTCTTACAT+CGG 0.525916 2_2:-51305720 None:intergenic
TGACAATTCATCATCAAGAC+TGG 0.526302 2_2:+51303504 Msa0256510:CDS
AGGATATTCTTCGCTACTCA+AGG 0.530163 2_2:+51305497 Msa0256510:intron
TTAAAGCTTCAAGTAGCCGC+AGG 0.531671 2_2:-51306095 None:intergenic
TATTGATGCCAATGAAGTCC+AGG 0.531915 2_2:-51304845 None:intergenic
AGAAAAGGTGCCGATGTAAG+AGG 0.541742 2_2:+51305710 Msa0256510:intron
CTTTCGGAAACTGTTATACT+GGG 0.544594 2_2:+51304059 Msa0256510:CDS
ATGAGAGATGGCATTCCAAT+TGG 0.546379 2_2:+51304960 Msa0256510:CDS
TTCTCGGGAACCAGTTGCCT+AGG 0.548933 2_2:+51304787 Msa0256510:CDS
TATCATTACTAGAATTGTTG+AGG 0.550205 2_2:-51305865 None:intergenic
TCCGACTTTGGCTTTATGAG+AGG 0.555997 2_2:+51304007 Msa0256510:CDS
TCTTAGTTATACCTAAATCC+GGG 0.559436 2_2:+51303447 Msa0256510:intron
TATAACAGTTTCCGAAAGGA+GGG 0.560545 2_2:-51304054 None:intergenic
CAAACAACTGGGATGAGAGA+TGG 0.560832 2_2:+51304948 Msa0256510:CDS
TGTGAATATCACTAATAACA+TGG 0.564081 2_2:+51306034 Msa0256510:three_prime_UTR
ATGATAAACAATGATGAGAA+TGG 0.565100 2_2:+51302386 Msa0256510:CDS
ATGTAAGAGGATACATGGTA+TGG 0.567786 2_2:+51305723 Msa0256510:CDS
TATTCTTCGCTACTCAAGGC+AGG 0.572710 2_2:+51305501 Msa0256510:CDS
TGGAACAAAGATATGGTGGT+TGG 0.575720 2_2:+51303537 Msa0256510:CDS
TATGCTGTTGTCACATGCTA+AGG 0.579173 2_2:+51304117 Msa0256510:CDS
GTATAACAGTTTCCGAAAGG+AGG 0.580594 2_2:-51304055 None:intergenic
AAAGGAGGGGAACAATGACC+AGG 0.581271 2_2:-51304040 None:intergenic
CTTCGAGAGGGCAAGTAGAG+AGG 0.583371 2_2:-51304899 None:intergenic
GTTATACCTAAATCCGGGCA+TGG 0.585018 2_2:+51303452 Msa0256510:intron
TGCCGATGTAAGAGGATACA+TGG 0.588178 2_2:+51305718 Msa0256510:CDS
ATGTTTATCCAGGCAAAGCA+AGG 0.608411 2_2:+51304240 Msa0256510:intron
CTTATAGCTTAACGGAAGCA+CGG 0.609529 2_2:+51306290 Msa0256510:three_prime_UTR
GATGCCAATGAAGTCCAGGC+TGG 0.611035 2_2:-51304841 None:intergenic
TGATAGACAAGCTGCAAACA+GGG 0.611361 2_2:+51304323 Msa0256510:CDS
TTGGACGAGCTTCTTCGAGA+GGG 0.612747 2_2:-51304911 None:intergenic
TCCTCTCATAAAGCCAAAGT+CGG 0.613581 2_2:-51304008 None:intergenic
AGGAAGTGCTTGTTCCAAAG+AGG 0.614337 2_2:-51302094 None:intergenic
TCAAATTGATGTCATCACTT+GGG 0.615282 2_2:+51302561 Msa0256510:CDS
GATAAATAGAGGTTTATGAG+TGG 0.616780 2_2:+51306352 Msa0256510:three_prime_UTR
CCAGTATAACAGTTTCCGAA+AGG 0.618205 2_2:-51304058 None:intergenic
GTGAATATCACTAATAACAT+GGG 0.619738 2_2:+51306035 Msa0256510:three_prime_UTR
ACAGCATATTGTGCATAGCA+AGG 0.621689 2_2:-51304102 None:intergenic
TGGTAAAGGTTTAAGCAACT+GGG 0.623254 2_2:+51302249 Msa0256510:CDS
CCAGCCTATGACAAAAGCAT+AGG 0.624034 2_2:-51304346 None:intergenic
GGTATGTGCAACAATACCAA+TGG 0.624553 2_2:-51304268 None:intergenic
CTACGGGGCTCTCTATGTCA+AGG 0.624808 2_2:+51304869 Msa0256510:CDS
TGGCTCTAAGCAAAGCTGCA+AGG 0.627948 2_2:-51305581 None:intergenic
ATTGGACGAGCTTCTTCGAG+AGG 0.628914 2_2:-51304912 None:intergenic
TAGTGAATTTACTGAATTAG+GGG 0.635079 2_2:-51303566 None:intergenic
TAAAGCTTCAAGTAGCCGCA+GGG 0.637709 2_2:-51306094 None:intergenic
GAATAGAGCGCATCTCAGCA+GGG 0.641200 2_2:-51304767 None:intergenic
GACAACTTTGAATGGAACAG+TGG 0.646793 2_2:+51305755 Msa0256510:CDS
GTCAAATAGAGGTTTATGAG+AGG 0.648357 2_2:+51306312 Msa0256510:three_prime_UTR
GAGCTGGAACAAAGATATGG+TGG 0.651160 2_2:+51303533 Msa0256510:CDS
ATAACAGTTTCCGAAAGGAG+GGG 0.659674 2_2:-51304053 None:intergenic
GATGTATTCAGTCACACACC+AGG 0.667347 2_2:+51302271 Msa0256510:CDS
TGGTGCAAACACATTATCAG+AGG 0.669251 2_2:-51301942 None:intergenic
GTTTGGATACTGACCAAACG+CGG 0.672125 2_2:+51306066 Msa0256510:three_prime_UTR
TTCTCCTTAGATGAGAACCT+AGG 0.683372 2_2:-51304804 None:intergenic
TTTATCCAGGCAAAGCAAGG+TGG 0.685226 2_2:+51304243 Msa0256510:intron
ATATTGTGCATAGCAAGGAG+AGG 0.695537 2_2:-51304097 None:intergenic
CATTGGCATCAATAACTACG+GGG 0.728835 2_2:+51304854 Msa0256510:CDS
CCAAACGCGGTATAACCCTG+CGG 0.826727 2_2:+51306079 Msa0256510:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATCAATTATTTATGATATA+TGG - chr2_2:51301911-51301930 None:intergenic 10.0%
!! TATATTAATAAATGTAGTTA+AGG - chr2_2:51302497-51302516 None:intergenic 10.0%
!! TTACTTAACTAAAAAAAAAA+AGG - chr2_2:51303596-51303615 None:intergenic 10.0%
!! AACATACTATTTATTATTAA+GGG + chr2_2:51306004-51306023 Msa0256510:three_prime_UTR 10.0%
!!! ATACAATTTCATTTTTTTAA+TGG + chr2_2:51306182-51306201 Msa0256510:three_prime_UTR 10.0%
!! TAACAACTTACAATATATAT+GGG + chr2_2:51301885-51301904 Msa0256510:five_prime_UTR 15.0%
!!! TCATATTACTGAATTTTTAT+AGG - chr2_2:51302452-51302471 None:intergenic 15.0%
!!! TATATAGATTTTCAATTTCA+TGG + chr2_2:51302591-51302610 Msa0256510:CDS 15.0%
!! TAATTTGAAAGATAAAATTG+TGG - chr2_2:51302666-51302685 None:intergenic 15.0%
!! AAATTTACTTGTAGTTAAAT+AGG - chr2_2:51302980-51302999 None:intergenic 15.0%
!!! ATGAACAATTATTTGATAAT+CGG + chr2_2:51305214-51305233 Msa0256510:intron 15.0%
!! CAACATACTATTTATTATTA+AGG + chr2_2:51306003-51306022 Msa0256510:three_prime_UTR 15.0%
!!! TAATTGATTTTGATAAATAG+AGG + chr2_2:51306341-51306360 Msa0256510:three_prime_UTR 15.0%
!! CATATATATTGTAAGTTGTT+AGG - chr2_2:51301886-51301905 None:intergenic 20.0%
!! CTAACAACTTACAATATATA+TGG + chr2_2:51301884-51301903 Msa0256510:five_prime_UTR 20.0%
!!! ACTGAAAAAGTATATATACT+TGG - chr2_2:51302124-51302143 None:intergenic 20.0%
!! AATGGAAAAAATCTCATTAA+TGG - chr2_2:51302194-51302213 None:intergenic 20.0%
!! TTCAATCTATGAAGAAAAAA+TGG - chr2_2:51302212-51302231 None:intergenic 20.0%
!!! ATTTTTTCTTCATAGATTGA+AGG + chr2_2:51302211-51302230 Msa0256510:intron 20.0%
!! AAATGAAAAAGAAATATACC+TGG - chr2_2:51302292-51302311 None:intergenic 20.0%
!! TGAATAACTACAATACAATT+TGG + chr2_2:51302350-51302369 Msa0256510:intron 20.0%
!!! ATACAATTTGGTAAATTTTC+AGG + chr2_2:51302362-51302381 Msa0256510:intron 20.0%
!! AAACAGTTATGTGAATAATT+GGG - chr2_2:51302643-51302662 None:intergenic 20.0%
!! TACTATTCTCAATTTAGTAT+TGG + chr2_2:51303687-51303706 Msa0256510:intron 20.0%
!!! TTTTGTAATATTTCTACGTT+AGG + chr2_2:51304200-51304219 Msa0256510:intron 20.0%
!! TAAACTATTATCCATACAAA+TGG + chr2_2:51304441-51304460 Msa0256510:intron 20.0%
!! CTATTAGTTGAAATTCAAAT+AGG + chr2_2:51304501-51304520 Msa0256510:intron 20.0%
!! AAATTGTTCCAAATTTATGT+GGG - chr2_2:51304568-51304587 None:intergenic 20.0%
!!! GTTCTTTTCATTATGTTATA+TGG + chr2_2:51305011-51305030 Msa0256510:intron 20.0%
!! TGTCAATTAATGTTTGAAAA+TGG + chr2_2:51305053-51305072 Msa0256510:intron 20.0%
!!! ATGGATTTTTTTAAAGATTG+CGG + chr2_2:51305072-51305091 Msa0256510:intron 20.0%
!! TTATCAAATAATTGTTCATG+AGG - chr2_2:51305213-51305232 None:intergenic 20.0%
!!! TATATGATCTCATTTTTGTT+TGG + chr2_2:51305414-51305433 Msa0256510:intron 20.0%
!! ATTTACTACATGATTTCAAA+CGG + chr2_2:51305538-51305557 Msa0256510:CDS 20.0%
!!! AAAAGCATTCATAAAAAACA+AGG - chr2_2:51305646-51305665 None:intergenic 20.0%
!! AGTGGATATGATAAAAAATT+TGG + chr2_2:51305773-51305792 Msa0256510:CDS 20.0%
!! AAAATTTGGACTTTATTATG+TGG + chr2_2:51305787-51305806 Msa0256510:CDS 20.0%
!! TCCAACAACATATTTATTTA+AGG + chr2_2:51306154-51306173 Msa0256510:three_prime_UTR 20.0%
!! ACCTTAAATAAATATGTTGT+TGG - chr2_2:51306158-51306177 None:intergenic 20.0%
!! ATAAGTGATGTATGTTTATA+CGG + chr2_2:51306207-51306226 Msa0256510:three_prime_UTR 20.0%
! GTTGAATGAAAATGCAAAAA+TGG + chr2_2:51301967-51301986 Msa0256510:exon 25.0%
! AAGTATATATACTTGGTAAG+AGG - chr2_2:51302117-51302136 None:intergenic 25.0%
! AAGTATCTCAGAAGAAAAAA+AGG - chr2_2:51302157-51302176 None:intergenic 25.0%
! ATGATAAACAATGATGAGAA+TGG + chr2_2:51302386-51302405 Msa0256510:CDS 25.0%
! TTAATATAGTGCACTCTTTA+AGG + chr2_2:51302509-51302528 Msa0256510:intron 25.0%
! AACAGTTATGTGAATAATTG+GGG - chr2_2:51302642-51302661 None:intergenic 25.0%
! GAAACAGTTATGTGAATAAT+TGG - chr2_2:51302644-51302663 None:intergenic 25.0%
! TGATGACCATAATATAAAGT+AGG - chr2_2:51302901-51302920 None:intergenic 25.0%
!!! AGTTAAATAGGCTTTTAAGT+AGG - chr2_2:51302968-51302987 None:intergenic 25.0%
!!! TTAATAGGCTTTGTTGTTAT+AGG - chr2_2:51303029-51303048 None:intergenic 25.0%
! TATAACAACAAAGCCTATTA+AGG + chr2_2:51303028-51303047 Msa0256510:intron 25.0%
! ATAACAACAAAGCCTATTAA+GGG + chr2_2:51303029-51303048 Msa0256510:intron 25.0%
! AAAAGCCTGTTTAGTTAAAT+AGG - chr2_2:51303192-51303211 None:intergenic 25.0%
! TTCTTAGTTATACCTAAATC+CGG + chr2_2:51303446-51303465 Msa0256510:intron 25.0%
! TAGTGAATTTACTGAATTAG+GGG - chr2_2:51303569-51303588 None:intergenic 25.0%
! GTAGTGAATTTACTGAATTA+GGG - chr2_2:51303570-51303589 None:intergenic 25.0%
! AGTAGTGAATTTACTGAATT+AGG - chr2_2:51303571-51303590 None:intergenic 25.0%
! ACAAAAAATGCTTTCAGTTT+AGG - chr2_2:51304186-51304205 None:intergenic 25.0%
! AATATACTCACAAAATAGTG+AGG - chr2_2:51304527-51304546 None:intergenic 25.0%
! CAAATTGTTCCAAATTTATG+TGG - chr2_2:51304569-51304588 None:intergenic 25.0%
! TGAATTTCAACTAATAAGTG+AGG + chr2_2:51304591-51304610 Msa0256510:intron 25.0%
! GAATTTCAACTAATAAGTGA+GGG + chr2_2:51304592-51304611 Msa0256510:intron 25.0%
! AACATAATGAAAAGAACAGT+TGG - chr2_2:51305008-51305027 None:intergenic 25.0%
! TTATCAAATTGTGACATTAG+TGG + chr2_2:51305107-51305126 Msa0256510:intron 25.0%
!! CCATTTTCTGTAATATACAT+GGG - chr2_2:51305373-51305392 None:intergenic 25.0%
!! ACCATTTTCTGTAATATACA+TGG - chr2_2:51305374-51305393 None:intergenic 25.0%
! ATCACTTGTGTAATATATGA+TGG + chr2_2:51305452-51305471 Msa0256510:intron 25.0%
! AATTTGATTATGTGCAGAAA+AGG + chr2_2:51305695-51305714 Msa0256510:intron 25.0%
! TATCATTACTAGAATTGTTG+AGG - chr2_2:51305868-51305887 None:intergenic 25.0%
! TCAAATGATAACTTAGACAA+CGG - chr2_2:51305942-51305961 None:intergenic 25.0%
! TGTGAATATCACTAATAACA+TGG + chr2_2:51306034-51306053 Msa0256510:three_prime_UTR 25.0%
! GTGAATATCACTAATAACAT+GGG + chr2_2:51306035-51306054 Msa0256510:three_prime_UTR 25.0%
! TTTGCATTTTCATTCAACTG+TGG - chr2_2:51301965-51301984 None:intergenic 30.0%
AATAGATCTCAATTCCCAAA+TGG + chr2_2:51302068-51302087 Msa0256510:CDS 30.0%
TATCTCAGAAGAAAAAAAGG+AGG - chr2_2:51302154-51302173 None:intergenic 30.0%
TGATCATTATCATCGCTATT+TGG + chr2_2:51302421-51302440 Msa0256510:CDS 30.0%
ATCAAATTGATGTCATCACT+TGG + chr2_2:51302560-51302579 Msa0256510:CDS 30.0%
TCAAATTGATGTCATCACTT+GGG + chr2_2:51302561-51302580 Msa0256510:CDS 30.0%
! GATTTTCAATTTCATGGTCT+AGG + chr2_2:51302597-51302616 Msa0256510:CDS 30.0%
ATAATTGGGGAATACTTACT+AGG - chr2_2:51302629-51302648 None:intergenic 30.0%
TACAGGCCTACTTTATATTA+TGG + chr2_2:51302892-51302911 Msa0256510:intron 30.0%
! GCTTGTTTAGCTTATTTAGT+AGG - chr2_2:51302938-51302957 None:intergenic 30.0%
!! GTTGTTATAGGCTTTTAAGT+AGG - chr2_2:51303017-51303036 None:intergenic 30.0%
CTATCTATTAGTCCCTTAAT+AGG - chr2_2:51303044-51303063 None:intergenic 30.0%
!! TTTTTAAAAAGCCTAAGCCT+AGG + chr2_2:51303208-51303227 Msa0256510:intron 30.0%
TCTTAGTTATACCTAAATCC+GGG + chr2_2:51303447-51303466 Msa0256510:intron 30.0%
! TGATGATGAATTGTCACAAA+TGG - chr2_2:51303500-51303519 None:intergenic 30.0%
GTGCTAGATAAAGAATAACT+TGG + chr2_2:51303770-51303789 Msa0256510:intron 30.0%
! GATCTGTTAACTCAAACTTT+TGG - chr2_2:51303860-51303879 None:intergenic 30.0%
! AGTTTGAGTTAACAGATCAA+TGG + chr2_2:51303862-51303881 Msa0256510:intron 30.0%
! GAAATTTGTTTCAAGAGCTT+TGG + chr2_2:51303938-51303957 Msa0256510:CDS 30.0%
TTTATACCGCAAACAATATC+AGG + chr2_2:51304147-51304166 Msa0256510:CDS 30.0%
TTGTTACCTGATATTGTTTG+CGG - chr2_2:51304156-51304175 None:intergenic 30.0%
! TGTAATATTTCTACGTTAGG+TGG + chr2_2:51304203-51304222 Msa0256510:intron 30.0%
! GTAATATTTCTACGTTAGGT+GGG + chr2_2:51304204-51304223 Msa0256510:intron 30.0%
TCTAAGAGGTTCATACATAA+AGG - chr2_2:51304292-51304311 None:intergenic 30.0%
GAATGTACACTATTAATGAC+AGG + chr2_2:51304664-51304683 Msa0256510:intron 30.0%
TTCATTGGCATCAATAACTA+CGG + chr2_2:51304852-51304871 Msa0256510:CDS 30.0%
! GTTTGCAAAAAGCCTTTTAT+TGG - chr2_2:51304933-51304952 None:intergenic 30.0%
CCCATGTATATTACAGAAAA+TGG + chr2_2:51305370-51305389 Msa0256510:CDS 30.0%
! CTTGTGTAATATATGATGGA+TGG + chr2_2:51305456-51305475 Msa0256510:intron 30.0%
! TTATACTTTGTCTGTTGACT+GGG + chr2_2:51305668-51305687 Msa0256510:intron 30.0%
AATTTGCGAGAAACGTTATT+TGG + chr2_2:51306116-51306135 Msa0256510:three_prime_UTR 30.0%
CCTCTTAACTTATAGCTTAA+CGG + chr2_2:51306282-51306301 Msa0256510:three_prime_UTR 30.0%
GATAAATAGAGGTTTATGAG+TGG + chr2_2:51306352-51306371 Msa0256510:three_prime_UTR 30.0%
GATCACTCAGAACTTATTTA+AGG + chr2_2:51306379-51306398 Msa0256510:three_prime_UTR 30.0%
TTCCAAAGAGGAAACCATTT+GGG - chr2_2:51302085-51302104 None:intergenic 35.0%
ATGGTAAAGGTTTAAGCAAC+TGG + chr2_2:51302248-51302267 Msa0256510:CDS 35.0%
TGGTAAAGGTTTAAGCAACT+GGG + chr2_2:51302249-51302268 Msa0256510:CDS 35.0%
TCTGAATGATTGTCTTTGAC+AGG + chr2_2:51302532-51302551 Msa0256510:intron 35.0%
GATGTAACAGGAGGAATATA+CGG + chr2_2:51302707-51302726 Msa0256510:intron 35.0%
ATGTAACAGGAGGAATATAC+GGG + chr2_2:51302708-51302727 Msa0256510:intron 35.0%
!!! TGTAAATTTTTTCGTAGGCC+AGG - chr2_2:51302782-51302801 None:intergenic 35.0%
TGGCCTACGAAAAAATTTAC+AGG + chr2_2:51302781-51302800 Msa0256510:intron 35.0%
!!! AGGCCTGTAAATTTTTTCGT+AGG - chr2_2:51302787-51302806 None:intergenic 35.0%
TATAAAGTAGGCCTGTAAGT+AGG - chr2_2:51302889-51302908 None:intergenic 35.0%
!! AGGCTTTTAAGTAGGCTTTA+AGG - chr2_2:51302960-51302979 None:intergenic 35.0%
TATTAATAGGCCAGCCTATT+AGG + chr2_2:51303134-51303153 Msa0256510:intron 35.0%
AAAAGCCTGTTAAGCCTAAT+AGG - chr2_2:51303151-51303170 None:intergenic 35.0%
TTGTAGAACATAACTCCACT+TGG - chr2_2:51303339-51303358 None:intergenic 35.0%
! ATAGACAATCTGCTACTTAG+AGG + chr2_2:51303366-51303385 Msa0256510:intron 35.0%
TGACAATTCATCATCAAGAC+TGG + chr2_2:51303504-51303523 Msa0256510:CDS 35.0%
TTGAGTGTAACCAAATGTGT+TGG - chr2_2:51303662-51303681 None:intergenic 35.0%
AAGAGAATTCATCAACTCGT+TGG - chr2_2:51303824-51303843 None:intergenic 35.0%
! GAAGTTTGTCACTTCTTACT+TGG + chr2_2:51303884-51303903 Msa0256510:intron 35.0%
ACTTCTTACTTGGTATTTGC+AGG + chr2_2:51303894-51303913 Msa0256510:intron 35.0%
!! TTTCAAGAGCTTTGGAGATA+GGG + chr2_2:51303946-51303965 Msa0256510:CDS 35.0%
TTGGAGATAGGGTTAAGTAT+TGG + chr2_2:51303957-51303976 Msa0256510:CDS 35.0%
TGGAGATAGGGTTAAGTATT+GGG + chr2_2:51303958-51303977 Msa0256510:CDS 35.0%
! AACAAGATTTGGCTCATTCA+TGG - chr2_2:51303987-51304006 None:intergenic 35.0%
TATAACAGTTTCCGAAAGGA+GGG - chr2_2:51304057-51304076 None:intergenic 35.0%
CTTTCGGAAACTGTTATACT+GGG + chr2_2:51304059-51304078 Msa0256510:CDS 35.0%
TACTGAATGGATGTTTATCC+AGG + chr2_2:51304230-51304249 Msa0256510:intron 35.0%
TCACATTCTTCATCTCTAAG+AGG - chr2_2:51304306-51304325 None:intergenic 35.0%
! GAAAAGATAGTGTTGTTGCT+AGG - chr2_2:51304468-51304487 None:intergenic 35.0%
TGTTCCAAATTTATGTGGGA+CGG - chr2_2:51304564-51304583 None:intergenic 35.0%
TCATTGGCATCAATAACTAC+GGG + chr2_2:51304853-51304872 Msa0256510:CDS 35.0%
! AAAGGCTTTTTGCAAACAAC+TGG + chr2_2:51304936-51304955 Msa0256510:CDS 35.0%
! AAGGCTTTTTGCAAACAACT+GGG + chr2_2:51304937-51304956 Msa0256510:CDS 35.0%
ACTTTATGCCTTGAGATTAC+AGG + chr2_2:51305161-51305180 Msa0256510:intron 35.0%
CTTTATGCCTTGAGATTACA+GGG + chr2_2:51305162-51305181 Msa0256510:intron 35.0%
!!! TTCCTTTATTTTGTGCAGAC+AGG + chr2_2:51305271-51305290 Msa0256510:intron 35.0%
TTCCTGTCTGCACAAAATAA+AGG - chr2_2:51305276-51305295 None:intergenic 35.0%
ATGGTTCTTTGTAGTTCCAA+AGG + chr2_2:51305300-51305319 Msa0256510:intron 35.0%
TGGTTCTTTGTAGTTCCAAA+GGG + chr2_2:51305301-51305320 Msa0256510:intron 35.0%
!! GGCTATACAAAATTTGTTGC+AGG + chr2_2:51305477-51305496 Msa0256510:intron 35.0%
GTTATACTTTGTCTGTTGAC+TGG + chr2_2:51305667-51305686 Msa0256510:intron 35.0%
! TATACTTTGTCTGTTGACTG+GGG + chr2_2:51305669-51305688 Msa0256510:intron 35.0%
TACCATGTATCCTCTTACAT+CGG - chr2_2:51305723-51305742 None:intergenic 35.0%
ATGTAAGAGGATACATGGTA+TGG + chr2_2:51305723-51305742 Msa0256510:CDS 35.0%
CGTTGTTTGACAACTTTGAA+TGG + chr2_2:51305747-51305766 Msa0256510:CDS 35.0%
TTCCTAAACTTTCTGTTCAG+TGG + chr2_2:51305831-51305850 Msa0256510:CDS 35.0%
AACCACTGAACAGAAAGTTT+AGG - chr2_2:51305836-51305855 None:intergenic 35.0%
CTTGCTCAACTCTTCTATAT+TGG - chr2_2:51305891-51305910 None:intergenic 35.0%
!! TAACATGGGTTGATTCTGTT+TGG + chr2_2:51306049-51306068 Msa0256510:three_prime_UTR 35.0%
CCGTTAAGCTATAAGTTAAG+AGG - chr2_2:51306285-51306304 None:intergenic 35.0%
GTCAAATAGAGGTTTATGAG+AGG + chr2_2:51306312-51306331 Msa0256510:three_prime_UTR 35.0%
TGGTGCAAACACATTATCAG+AGG - chr2_2:51301945-51301964 None:intergenic 40.0%
TTCCCAAATGGTTTCCTCTT+TGG + chr2_2:51302080-51302099 Msa0256510:CDS 40.0%
GTTCCAAAGAGGAAACCATT+TGG - chr2_2:51302086-51302105 None:intergenic 40.0%
!! GCAGCTTTTGAAGATGGTAA+AGG + chr2_2:51302235-51302254 Msa0256510:CDS 40.0%
CCTGTTACATCTCATGAACA+AGG - chr2_2:51302698-51302717 None:intergenic 40.0%
CCTTGTTCATGAGATGTAAC+AGG + chr2_2:51302695-51302714 Msa0256510:intron 40.0%
TGTTCATGAGATGTAACAGG+AGG + chr2_2:51302698-51302717 Msa0256510:intron 40.0%
TGTAACAGGAGGAATATACG+GGG + chr2_2:51302709-51302728 Msa0256510:intron 40.0%
!!! CTATCATAGGCCGTTTTTCT+GGG + chr2_2:51302823-51302842 Msa0256510:intron 40.0%
! TTAGGCTTAACAGGCTTTTC+TGG + chr2_2:51303152-51303171 Msa0256510:intron 40.0%
TAGTTAAATAGGCCAGGCTT+AGG - chr2_2:51303181-51303200 None:intergenic 40.0%
CCTGTTTAGTTAAATAGGCC+AGG - chr2_2:51303187-51303206 None:intergenic 40.0%
CCTGGCCTATTTAACTAAAC+AGG + chr2_2:51303184-51303203 Msa0256510:intron 40.0%
GGATTTATGTCCCCGTATTA+GGG - chr2_2:51303318-51303337 None:intergenic 40.0%
TGGATTTATGTCCCCGTATT+AGG - chr2_2:51303319-51303338 None:intergenic 40.0%
TATCTTTGTTCCAGCTCTTG+TGG - chr2_2:51303530-51303549 None:intergenic 40.0%
CAAGAGCTGGAACAAAGATA+TGG + chr2_2:51303530-51303549 Msa0256510:CDS 40.0%
TGGAACAAAGATATGGTGGT+TGG + chr2_2:51303537-51303556 Msa0256510:CDS 40.0%
!! TAGTATTGGTGTTGACCTGT+CGG + chr2_2:51303701-51303720 Msa0256510:intron 40.0%
!! GTTTCAAGAGCTTTGGAGAT+AGG + chr2_2:51303945-51303964 Msa0256510:CDS 40.0%
CCAAAGTCGGAAACAAGATT+TGG - chr2_2:51303998-51304017 None:intergenic 40.0%
! CCAAATCTTGTTTCCGACTT+TGG + chr2_2:51303995-51304014 Msa0256510:CDS 40.0%
TCCTCTCATAAAGCCAAAGT+CGG - chr2_2:51304011-51304030 None:intergenic 40.0%
ATGAGAGGAACATATTCTCC+TGG + chr2_2:51304022-51304041 Msa0256510:CDS 40.0%
ATAACAGTTTCCGAAAGGAG+GGG - chr2_2:51304056-51304075 None:intergenic 40.0%
GTATAACAGTTTCCGAAAGG+AGG - chr2_2:51304058-51304077 None:intergenic 40.0%
CCAGTATAACAGTTTCCGAA+AGG - chr2_2:51304061-51304080 None:intergenic 40.0%
CCTTTCGGAAACTGTTATAC+TGG + chr2_2:51304058-51304077 Msa0256510:CDS 40.0%
ATATTGTGCATAGCAAGGAG+AGG - chr2_2:51304100-51304119 None:intergenic 40.0%
ACAGCATATTGTGCATAGCA+AGG - chr2_2:51304105-51304124 None:intergenic 40.0%
TATGCTGTTGTCACATGCTA+AGG + chr2_2:51304117-51304136 Msa0256510:CDS 40.0%
ATGTTTATCCAGGCAAAGCA+AGG + chr2_2:51304240-51304259 Msa0256510:intron 40.0%
GGTATGTGCAACAATACCAA+TGG - chr2_2:51304271-51304290 None:intergenic 40.0%
TGATAGACAAGCTGCAAACA+GGG + chr2_2:51304323-51304342 Msa0256510:CDS 40.0%
CAGAAGCAAAACTCTTCTCT+TGG - chr2_2:51304397-51304416 None:intergenic 40.0%
! CAAGAGAAGAGTTTTGCTTC+TGG + chr2_2:51304395-51304414 Msa0256510:intron 40.0%
TGTTGCTAGGACCATTTGTA+TGG - chr2_2:51304455-51304474 None:intergenic 40.0%
ATGTCCGTCCCACATAAATT+TGG + chr2_2:51304557-51304576 Msa0256510:intron 40.0%
TCAACTAATAAGTGAGGGTG+TGG + chr2_2:51304597-51304616 Msa0256510:intron 40.0%
! CAACTAATAAGTGAGGGTGT+GGG + chr2_2:51304598-51304617 Msa0256510:intron 40.0%
! AACTTTTCCTGCTCTTCTGA+TGG + chr2_2:51304710-51304729 Msa0256510:intron 40.0%
!! TTACTAGATCCCCTGGTTTT+TGG + chr2_2:51304738-51304757 Msa0256510:CDS 40.0%
TTCTCCTTAGATGAGAACCT+AGG - chr2_2:51304807-51304826 None:intergenic 40.0%
TATTGATGCCAATGAAGTCC+AGG - chr2_2:51304848-51304867 None:intergenic 40.0%
CATTGGCATCAATAACTACG+GGG + chr2_2:51304854-51304873 Msa0256510:CDS 40.0%
GAAGAAGCTCGTCCAATAAA+AGG + chr2_2:51304918-51304937 Msa0256510:CDS 40.0%
ATGAGAGATGGCATTCCAAT+TGG + chr2_2:51304960-51304979 Msa0256510:CDS 40.0%
ATGAGTACCTGATCACCAAT+TGG - chr2_2:51304978-51304997 None:intergenic 40.0%
TTGTGCAGACAGGAATGAAA+TGG + chr2_2:51305281-51305300 Msa0256510:intron 40.0%
AGGATATTCTTCGCTACTCA+AGG + chr2_2:51305497-51305516 Msa0256510:intron 40.0%
CTTCATCATCACTCACCTTA+TGG - chr2_2:51305604-51305623 None:intergenic 40.0%
GACAACTTTGAATGGAACAG+TGG + chr2_2:51305755-51305774 Msa0256510:CDS 40.0%
CTTATAGCTTAACGGAAGCA+CGG + chr2_2:51306290-51306309 Msa0256510:three_prime_UTR 40.0%
!! AGGAAGTGCTTGTTCCAAAG+AGG - chr2_2:51302097-51302116 None:intergenic 45.0%
!! GAAGGAGCAGCTTTTGAAGA+TGG + chr2_2:51302229-51302248 Msa0256510:CDS 45.0%
GATGTATTCAGTCACACACC+AGG + chr2_2:51302271-51302290 Msa0256510:CDS 45.0%
AAAATTTACAGGCCTGAGCC+TGG + chr2_2:51302792-51302811 Msa0256510:intron 45.0%
CCAGAAAAACGGCCTATGAT+AGG - chr2_2:51302825-51302844 None:intergenic 45.0%
!!! CCTATCATAGGCCGTTTTTC+TGG + chr2_2:51302822-51302841 Msa0256510:intron 45.0%
! TCCAGGCTTTTAAATAGGCC+AGG - chr2_2:51302854-51302873 None:intergenic 45.0%
GCCTATTTAAAAGCCTGGAC+TGG + chr2_2:51302855-51302874 Msa0256510:intron 45.0%
! GCCAGTCCAGGCTTTTAAAT+AGG - chr2_2:51302859-51302878 None:intergenic 45.0%
GCCTATTCCCAACCCTAATA+CGG + chr2_2:51303303-51303322 Msa0256510:intron 45.0%
CCTATTCCCAACCCTAATAC+GGG + chr2_2:51303304-51303323 Msa0256510:intron 45.0%
CTATTCCCAACCCTAATACG+GGG + chr2_2:51303305-51303324 Msa0256510:intron 45.0%
TATGTCCCCGTATTAGGGTT+GGG - chr2_2:51303313-51303332 None:intergenic 45.0%
TTATGTCCCCGTATTAGGGT+TGG - chr2_2:51303314-51303333 None:intergenic 45.0%
TACGGGGACATAAATCCAAG+TGG + chr2_2:51303321-51303340 Msa0256510:intron 45.0%
GTTATACCTAAATCCGGGCA+TGG + chr2_2:51303452-51303471 Msa0256510:intron 45.0%
GAGCTGGAACAAAGATATGG+TGG + chr2_2:51303533-51303552 Msa0256510:CDS 45.0%
!! CAAATGTGTTGGTGTCGTGT+CGG - chr2_2:51303651-51303670 None:intergenic 45.0%
!! TGACCTGTCGGTGTTGTATT+TGG + chr2_2:51303713-51303732 Msa0256510:intron 45.0%
AGACCAAATACAACACCGAC+AGG - chr2_2:51303719-51303738 None:intergenic 45.0%
!! TCCGACTTTGGCTTTATGAG+AGG + chr2_2:51304007-51304026 Msa0256510:CDS 45.0%
!! GTTAGGTGGGAAGTACTGAA+TGG + chr2_2:51304217-51304236 Msa0256510:intron 45.0%
TTTATCCAGGCAAAGCAAGG+TGG + chr2_2:51304243-51304262 Msa0256510:intron 45.0%
GTGATAGACAAGCTGCAAAC+AGG + chr2_2:51304322-51304341 Msa0256510:CDS 45.0%
! AGGGCCTATGCTTTTGTCAT+AGG + chr2_2:51304342-51304361 Msa0256510:CDS 45.0%
! CCAGCCTATGACAAAAGCAT+AGG - chr2_2:51304349-51304368 None:intergenic 45.0%
! CCTATGCTTTTGTCATAGGC+TGG + chr2_2:51304346-51304365 Msa0256510:CDS 45.0%
! AGGGTACTCACCAAAAACCA+GGG - chr2_2:51304751-51304770 None:intergenic 45.0%
TAGATGAGAACCTAGGCAAC+TGG - chr2_2:51304800-51304819 None:intergenic 45.0%
GTTGCCTAGGTTCTCATCTA+AGG + chr2_2:51304800-51304819 Msa0256510:CDS 45.0%
CAAACAACTGGGATGAGAGA+TGG + chr2_2:51304948-51304967 Msa0256510:CDS 45.0%
! TGGCATTCCAATTGGTGATC+AGG + chr2_2:51304968-51304987 Msa0256510:CDS 45.0%
TGCTAGACCCTGTAATCTCA+AGG - chr2_2:51305172-51305191 None:intergenic 45.0%
TTCATGAGGTCTCAGCATAC+TGG - chr2_2:51305199-51305218 None:intergenic 45.0%
CTTTGTAGTTCCAAAGGGCA+TGG + chr2_2:51305306-51305325 Msa0256510:intron 45.0%
ACAATCTTCTCCATGCCCTT+TGG - chr2_2:51305319-51305338 None:intergenic 45.0%
TATTCTTCGCTACTCAAGGC+AGG + chr2_2:51305501-51305520 Msa0256510:CDS 45.0%
CAGCTTTGCTTAGAGCCATA+AGG + chr2_2:51305586-51305605 Msa0256510:CDS 45.0%
!! AGAAAAGGTGCCGATGTAAG+AGG + chr2_2:51305710-51305729 Msa0256510:intron 45.0%
TGCCGATGTAAGAGGATACA+TGG + chr2_2:51305718-51305737 Msa0256510:CDS 45.0%
GTTTGGATACTGACCAAACG+CGG + chr2_2:51306066-51306085 Msa0256510:three_prime_UTR 45.0%
TAAAGCTTCAAGTAGCCGCA+GGG - chr2_2:51306097-51306116 None:intergenic 45.0%
TTAAAGCTTCAAGTAGCCGC+AGG - chr2_2:51306098-51306117 None:intergenic 45.0%
!!! TTTTAATAAATAGTATTAAT+AGG + chr2_2:51303121-51303140 Msa0256510:intron 5.0%
ACAGGAGGAATATACGGGGT+AGG + chr2_2:51302713-51302732 Msa0256510:intron 50.0%
CAGGAGGAATATACGGGGTA+GGG + chr2_2:51302714-51302733 Msa0256510:intron 50.0%
AGGAGGAATATACGGGGTAG+GGG + chr2_2:51302715-51302734 Msa0256510:intron 50.0%
!!! TTTTTTCGTAGGCCAGGCTC+AGG - chr2_2:51302776-51302795 None:intergenic 50.0%
AACGGCCTATGATAGGCCAT+AGG - chr2_2:51302818-51302837 None:intergenic 50.0%
! GCTTTTAAATAGGCCAGGCC+AGG - chr2_2:51302849-51302868 None:intergenic 50.0%
GCCTGGCCTATTTAAAAGCC+TGG + chr2_2:51302850-51302869 Msa0256510:intron 50.0%
TGGCCTGAAAGCCTACTTAC+AGG + chr2_2:51302875-51302894 Msa0256510:intron 50.0%
AGGCCTGTAAGTAGGCTTTC+AGG - chr2_2:51302881-51302900 None:intergenic 50.0%
GCCAGCCTATTAGGCTTAAC+AGG + chr2_2:51303143-51303162 Msa0256510:intron 50.0%
GCCTGTTAAGCCTAATAGGC+TGG - chr2_2:51303147-51303166 None:intergenic 50.0%
!! CTTTTCTGGAAGCCTAAGCC+TGG + chr2_2:51303166-51303185 Msa0256510:intron 50.0%
TCGTAGATAGGCCTAGGCTT+AGG - chr2_2:51303222-51303241 None:intergenic 50.0%
CCTGTTTCGTAGATAGGCCT+AGG - chr2_2:51303228-51303247 None:intergenic 50.0%
CCTAGGCCTATCTACGAAAC+AGG + chr2_2:51303225-51303244 Msa0256510:intron 50.0%
ATTAGGGTTGGGAATAGGCC+AGG - chr2_2:51303302-51303321 None:intergenic 50.0%
CCCGTATTAGGGTTGGGAAT+AGG - chr2_2:51303307-51303326 None:intergenic 50.0%
TAGATCAAGCAAGCCATGCC+CGG - chr2_2:51303468-51303487 None:intergenic 50.0%
!! GTCGTGTCGGTTCTGAAATG+TGG - chr2_2:51303638-51303657 None:intergenic 50.0%
CGACACGACACCAACACATT+TGG + chr2_2:51303649-51303668 Msa0256510:intron 50.0%
AAAGGAGGGGAACAATGACC+AGG - chr2_2:51304043-51304062 None:intergenic 50.0%
GGTCATTGTTCCCCTCCTTT+CGG + chr2_2:51304043-51304062 Msa0256510:CDS 50.0%
GCAAAGCAAGGTGGAACCAT+TGG + chr2_2:51304252-51304271 Msa0256510:CDS 50.0%
TTCCTGCTCTTCTGATGGCA+AGG + chr2_2:51304715-51304734 Msa0256510:intron 50.0%
AACCTTGCCATCAGAAGAGC+AGG - chr2_2:51304720-51304739 None:intergenic 50.0%
GGGTACTCACCAAAAACCAG+GGG - chr2_2:51304750-51304769 None:intergenic 50.0%
! CAGGGTACTCACCAAAAACC+AGG - chr2_2:51304752-51304771 None:intergenic 50.0%
GAATAGAGCGCATCTCAGCA+GGG - chr2_2:51304770-51304789 None:intergenic 50.0%
AGAATAGAGCGCATCTCAGC+AGG - chr2_2:51304771-51304790 None:intergenic 50.0%
GCTGAGATGCGCTCTATTCT+CGG + chr2_2:51304771-51304790 Msa0256510:CDS 50.0%
CTGAGATGCGCTCTATTCTC+GGG + chr2_2:51304772-51304791 Msa0256510:CDS 50.0%
TTGGACGAGCTTCTTCGAGA+GGG - chr2_2:51304914-51304933 None:intergenic 50.0%
ATTGGACGAGCTTCTTCGAG+AGG - chr2_2:51304915-51304934 None:intergenic 50.0%
!! TGGCTCTAAGCAAAGCTGCA+AGG - chr2_2:51305584-51305603 None:intergenic 50.0%
! ACGGAAGCACGGTCAAATAG+AGG + chr2_2:51306301-51306320 Msa0256510:three_prime_UTR 50.0%
AGGAATATACGGGGTAGGGG+TGG + chr2_2:51302718-51302737 Msa0256510:intron 55.0%
GGAATATACGGGGTAGGGGT+GGG + chr2_2:51302719-51302738 Msa0256510:intron 55.0%
CCTATGATAGGCCATAGGCC+AGG - chr2_2:51302813-51302832 None:intergenic 55.0%
CCTGGCCTATGGCCTATCAT+AGG + chr2_2:51302810-51302829 Msa0256510:intron 55.0%
!!! ATAGGCCGTTTTTCTGGGCC+TGG + chr2_2:51302828-51302847 Msa0256510:intron 55.0%
GCCTATCTACGAAACAGGCC+AGG + chr2_2:51303230-51303249 Msa0256510:intron 55.0%
GCCTGGCCTGTTTCGTAGAT+AGG - chr2_2:51303234-51303253 None:intergenic 55.0%
AGCAAGCCATGCCCGGATTT+AGG - chr2_2:51303461-51303480 None:intergenic 55.0%
!! GGGCATGGCTTGCTTGATCT+AGG + chr2_2:51303467-51303486 Msa0256510:CDS 55.0%
! TCAAGACTGGCCACAAGAGC+TGG + chr2_2:51303517-51303536 Msa0256510:CDS 55.0%
TGGTTCCACCTTGCTTTGCC+TGG - chr2_2:51304251-51304270 None:intergenic 55.0%
GGCAAGGTTACTAGATCCCC+TGG + chr2_2:51304731-51304750 Msa0256510:intron 55.0%
TTCTCGGGAACCAGTTGCCT+AGG + chr2_2:51304787-51304806 Msa0256510:CDS 55.0%
! GACACTTCTAAGAGCCAGCC+TGG + chr2_2:51304827-51304846 Msa0256510:CDS 55.0%
AGAGCCAGCCTGGACTTCAT+TGG + chr2_2:51304837-51304856 Msa0256510:CDS 55.0%
GATGCCAATGAAGTCCAGGC+TGG - chr2_2:51304844-51304863 None:intergenic 55.0%
CTACGGGGCTCTCTATGTCA+AGG + chr2_2:51304869-51304888 Msa0256510:CDS 55.0%
CTTCGAGAGGGCAAGTAGAG+AGG - chr2_2:51304902-51304921 None:intergenic 55.0%
CCAAACGCGGTATAACCCTG+CGG + chr2_2:51306079-51306098 Msa0256510:three_prime_UTR 55.0%
TACGGGGTAGGGGTGGGAAT+AGG + chr2_2:51302725-51302744 Msa0256510:intron 60.0%
TATCAAAGCCTGGCCTGGCC+TGG - chr2_2:51302751-51302770 None:intergenic 60.0%
! AGGCCAGGCCAGGCTTTGAT+AGG + chr2_2:51302750-51302769 Msa0256510:intron 60.0%
AGGCCTATCAAAGCCTGGCC+TGG - chr2_2:51302756-51302775 None:intergenic 60.0%
GGCTCAGGCCTATCAAAGCC+TGG - chr2_2:51302761-51302780 None:intergenic 60.0%
! GGCTTTGATAGGCCTGAGCC+TGG + chr2_2:51302761-51302780 Msa0256510:intron 60.0%
ATAGGCCATAGGCCAGGCTC+AGG - chr2_2:51302807-51302826 None:intergenic 60.0%
CCAGGCCAGGCCCAGAAAAA+CGG - chr2_2:51302836-51302855 None:intergenic 60.0%
GTAGGCTTTCAGGCCAGTCC+AGG - chr2_2:51302871-51302890 None:intergenic 60.0%
TCTACGAAACAGGCCAGGCC+AGG + chr2_2:51303235-51303254 Msa0256510:intron 60.0%
CCGCAGGGTTATACCGCGTT+TGG - chr2_2:51306082-51306101 None:intergenic 60.0%
GGTAGGGGTGGGAATAGGCC+AGG + chr2_2:51302730-51302749 Msa0256510:intron 65.0%
ACAGGCCTGAGCCTGGCCTA+TGG + chr2_2:51302799-51302818 Msa0256510:intron 65.0%
!! CCGTTTTTCTGGGCCTGGCC+TGG + chr2_2:51302833-51302852 Msa0256510:intron 65.0%
!!! TGTTTTGGCCTGGCCTGGCC+TGG - chr2_2:51303251-51303270 None:intergenic 65.0%
AGGCCAGGCCAGGCCAAAAC+AGG + chr2_2:51303250-51303269 Msa0256510:intron 65.0%
!!! TGGCCTGTTTTGGCCTGGCC+TGG - chr2_2:51303256-51303275 None:intergenic 65.0%
AGGCCAGGCCAAAACAGGCC+AGG + chr2_2:51303255-51303274 Msa0256510:intron 65.0%
GCCAAAACAGGCCAGGCCGT+AGG + chr2_2:51303262-51303281 Msa0256510:intron 65.0%
! GCCTACGGCCTGGCCTGTTT+TGG - chr2_2:51303266-51303285 None:intergenic 65.0%
ATAGGCCAGGCCGGCCTACA+GGG - chr2_2:51303289-51303308 None:intergenic 65.0%
AATAGGCCAGGCCGGCCTAC+AGG - chr2_2:51303290-51303309 None:intergenic 65.0%
GGGTTGGGAATAGGCCAGGC+CGG - chr2_2:51303298-51303317 None:intergenic 65.0%
GGGTGGGAATAGGCCAGGCC+AGG + chr2_2:51302735-51302754 Msa0256510:intron 70.0%
GGAATAGGCCAGGCCAGGCC+AGG + chr2_2:51302740-51302759 Msa0256510:intron 70.0%
GAAACAGGCCAGGCCAGGCC+AGG + chr2_2:51303240-51303259 Msa0256510:intron 70.0%
!!! CGGCCTGGCCTGTTTTGGCC+TGG - chr2_2:51303261-51303280 None:intergenic 70.0%
TAGGCCAGGCCGGCCTACAG+GGG - chr2_2:51303288-51303307 None:intergenic 70.0%
GCCAGGCCGTAGGCCCCTGT+AGG + chr2_2:51303272-51303291 Msa0256510:intron 75.0%
GCCTACAGGGGCCTACGGCC+TGG - chr2_2:51303276-51303295 None:intergenic 75.0%
GGCCGTAGGCCCCTGTAGGC+CGG + chr2_2:51303276-51303295 Msa0256510:intron 75.0%
GGCCGGCCTACAGGGGCCTA+CGG - chr2_2:51303281-51303300 None:intergenic 75.0%
TAGGCCCCTGTAGGCCGGCC+TGG + chr2_2:51303281-51303300 Msa0256510:intron 75.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 51301831 51306416 51301831 ID=Msa0256510;Name=Msa0256510
chr2_2 mRNA 51301831 51306416 51301831 ID=Msa0256510-mRNA-1;Parent=Msa0256510;Name=Msa0256510-mRNA-1;_AED=0.21;_eAED=0.21;_QI=141|0.8|0.81|1|1|1|11|467|505
chr2_2 exon 51301831 51302124 51301831 ID=Msa0256510-mRNA-1:exon:15512;Parent=Msa0256510-mRNA-1
chr2_2 exon 51302226 51302292 51302226 ID=Msa0256510-mRNA-1:exon:15513;Parent=Msa0256510-mRNA-1
chr2_2 exon 51302384 51302442 51302384 ID=Msa0256510-mRNA-1:exon:15514;Parent=Msa0256510-mRNA-1
chr2_2 exon 51302554 51302629 51302554 ID=Msa0256510-mRNA-1:exon:15515;Parent=Msa0256510-mRNA-1
chr2_2 exon 51303453 51303576 51303453 ID=Msa0256510-mRNA-1:exon:15516;Parent=Msa0256510-mRNA-1
chr2_2 exon 51303916 51304168 51303916 ID=Msa0256510-mRNA-1:exon:15517;Parent=Msa0256510-mRNA-1
chr2_2 exon 51304252 51304367 51304252 ID=Msa0256510-mRNA-1:exon:15518;Parent=Msa0256510-mRNA-1
chr2_2 exon 51304737 51304989 51304737 ID=Msa0256510-mRNA-1:exon:15519;Parent=Msa0256510-mRNA-1
chr2_2 exon 51305322 51305391 51305322 ID=Msa0256510-mRNA-1:exon:15520;Parent=Msa0256510-mRNA-1
chr2_2 exon 51305499 51305607 51305499 ID=Msa0256510-mRNA-1:exon:15521;Parent=Msa0256510-mRNA-1
chr2_2 exon 51305712 51306416 51305712 ID=Msa0256510-mRNA-1:exon:15522;Parent=Msa0256510-mRNA-1
chr2_2 five_prime_UTR 51301831 51301971 51301831 ID=Msa0256510-mRNA-1:five_prime_utr;Parent=Msa0256510-mRNA-1
chr2_2 CDS 51301972 51302124 51301972 ID=Msa0256510-mRNA-1:cds;Parent=Msa0256510-mRNA-1
chr2_2 CDS 51302226 51302292 51302226 ID=Msa0256510-mRNA-1:cds;Parent=Msa0256510-mRNA-1
chr2_2 CDS 51302384 51302442 51302384 ID=Msa0256510-mRNA-1:cds;Parent=Msa0256510-mRNA-1
chr2_2 CDS 51302554 51302629 51302554 ID=Msa0256510-mRNA-1:cds;Parent=Msa0256510-mRNA-1
chr2_2 CDS 51303453 51303576 51303453 ID=Msa0256510-mRNA-1:cds;Parent=Msa0256510-mRNA-1
chr2_2 CDS 51303916 51304168 51303916 ID=Msa0256510-mRNA-1:cds;Parent=Msa0256510-mRNA-1
chr2_2 CDS 51304252 51304367 51304252 ID=Msa0256510-mRNA-1:cds;Parent=Msa0256510-mRNA-1
chr2_2 CDS 51304737 51304989 51304737 ID=Msa0256510-mRNA-1:cds;Parent=Msa0256510-mRNA-1
chr2_2 CDS 51305322 51305391 51305322 ID=Msa0256510-mRNA-1:cds;Parent=Msa0256510-mRNA-1
chr2_2 CDS 51305499 51305607 51305499 ID=Msa0256510-mRNA-1:cds;Parent=Msa0256510-mRNA-1
chr2_2 CDS 51305712 51305949 51305712 ID=Msa0256510-mRNA-1:cds;Parent=Msa0256510-mRNA-1
chr2_2 three_prime_UTR 51305950 51306416 51305950 ID=Msa0256510-mRNA-1:three_prime_utr;Parent=Msa0256510-mRNA-1
Gene Sequence

>Msa0256510

ATGAAAATGCAAAAATGGTTTATGCATGTTGTGTTTACACTGCTTTGCTCTTCTCTTTTACATGTTCAAAGTTCTCATGAAGTTGAAAATGAAATCAATAGATCTCAATTCCCAAATGGTTTCCTCTTTGGAACAAGCACTTCCTCTTACCAAATTGAAGGAGCAGCTTTTGAAGATGGTAAAGGTTTAAGCAACTGGGATGTATTCAGTCACACACCAGGAATGATAAACAATGATGAGAATGGTGATATAGCAAATGATCATTATCATCGCTATTTGGAAGATATCAAATTGATGTCATCACTTGGGATAAATGTATATAGATTTTCAATTTCATGGTCTAGGATTCTACCTATTATACCTAAATCCGGGCATGGCTTGCTTGATCTAGGAATTGAGCCATTTGTGACAATTCATCATCAAGACTGGCCACAAGAGCTGGAACAAAGATATGGTGGTTGGCTTAGTCCCCTAATTCAGAGAGATTTTGTTCATTTTGCTGAAATTTGTTTCAAGAGCTTTGGAGATAGGGTTAAGTATTGGGTCACCATGAATGAGCCAAATCTTGTTTCCGACTTTGGCTTTATGAGAGGAACATATTCTCCTGGTCATTGTTCCCCTCCTTTCGGAAACTGTTATACTGGGAACTCAGATGTTGAGCCTCTCCTTGCTATGCACAATATGCTGTTGTCACATGCTAAGGCTGTTGATTTATACCGCAAACAATATCAGGCAAAGCAAGGTGGAACCATTGGTATTGTTGCACATACCTTTATGTATGAACCTCTTAGAGATGAAGAATGTGATAGACAAGCTGCAAACAGGGCCTATGCTTTTGTCATAGGCTGGTTACTAGATCCCCTGGTTTTTGGTGAGTACCCTGCTGAGATGCGCTCTATTCTCGGGAACCAGTTGCCTAGGTTCTCATCTAAGGAGAAGACACTTCTAAGAGCCAGCCTGGACTTCATTGGCATCAATAACTACGGGGCTCTCTATGTCAAGGATTGTTACCTCTCTACTTGCCCTCTCGAAGAAGCTCGTCCAATAAAAGGCTTTTTGCAAACAACTGGGATGAGAGATGGCATTCCAATTGGTGATCAGGGCATGGAGAAGATTGTAGACTACATAAAGATAAAATATCATAACATGCCCATGTATATTACAGAAAATGGATATTCTTCGCTACTCAAGGCAGGCATGACGATGCATGATTTACTACATGATTTCAAACGGATAGAGTATCATAAAGCTTACCTTGCAGCTTTGCTTAGAGCCATAAGAAAAGGTGCCGATGTAAGAGGATACATGGTATGGTCGTTGTTTGACAACTTTGAATGGAACAGTGGATATGATAAAAAATTTGGACTTTATTATGTGGATAGACAGACACTTGAGCGAATTCCTAAACTTTCTGTTCAGTGGTTTTCTAGTTTCCTCAACAATTCTAGTAATGATACCAATATAGAAGAGTTGAGCAAGCAATATAGAAGCAAATATGTGACAACTGCCGTTGTCTAA

Protein sequence

>Msa0256510

MKMQKWFMHVVFTLLCSSLLHVQSSHEVENEINRSQFPNGFLFGTSTSSYQIEGAAFEDGKGLSNWDVFSHTPGMINNDENGDIANDHYHRYLEDIKLMSSLGINVYRFSISWSRILPIIPKSGHGLLDLGIEPFVTIHHQDWPQELEQRYGGWLSPLIQRDFVHFAEICFKSFGDRVKYWVTMNEPNLVSDFGFMRGTYSPGHCSPPFGNCYTGNSDVEPLLAMHNMLLSHAKAVDLYRKQYQAKQGGTIGIVAHTFMYEPLRDEECDRQAANRAYAFVIGWLLDPLVFGEYPAEMRSILGNQLPRFSSKEKTLLRASLDFIGINNYGALYVKDCYLSTCPLEEARPIKGFLQTTGMRDGIPIGDQGMEKIVDYIKIKYHNMPMYITENGYSSLLKAGMTMHDLLHDFKRIEYHKAYLAALLRAIRKGADVRGYMVWSLFDNFEWNSGYDKKFGLYYVDRQTLERIPKLSVQWFSSFLNNSSNDTNIEELSKQYRSKYVTTAVV*