Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0725250 | XP_013448290.1 | 94.162 | 531 | 16 | 2 | 1 | 516 | 1 | 531 | 0.0 | 1026 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0725250 | sp|Q9FNY4|DPOLL_ARATH | 66.920 | 526 | 143 | 8 | 9 | 516 | 17 | 529 | 0.0 | 702 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0725250 | A0A072TY09 | 94.162 | 531 | 16 | 2 | 1 | 516 | 1 | 531 | 0.0 | 1026 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021810 | Msa0725250 | 0.815565 | 8.662497e-52 | -8.615850e-47 |
| Msa0040450 | Msa0725250 | 0.800050 | 1.728717e-48 | -8.615850e-47 |
| Msa0055040 | Msa0725250 | 0.813289 | 2.759694e-51 | -8.615850e-47 |
| Msa0079080 | Msa0725250 | 0.820550 | 6.465123e-53 | -8.615850e-47 |
| Msa0110970 | Msa0725250 | 0.802290 | 6.016772e-49 | -8.615850e-47 |
| Msa0114540 | Msa0725250 | -0.806689 | 7.281958e-50 | -8.615850e-47 |
| Msa0725250 | Msa0756630 | -0.817438 | 3.296928e-52 | -8.615850e-47 |
| Msa0725250 | Msa0760380 | 0.844324 | 8.111601e-59 | -8.615850e-47 |
| Msa0725250 | Msa0765830 | 0.877626 | 5.404609e-69 | -8.615850e-47 |
| Msa0725250 | Msa0778320 | 0.804115 | 2.522514e-49 | -8.615850e-47 |
| Msa0725250 | Msa0844240 | 0.808651 | 2.789543e-50 | -8.615850e-47 |
| Msa0725250 | Msa0845400 | 0.803514 | 3.361131e-49 | -8.615850e-47 |
| Msa0725250 | Msa0850960 | 0.800152 | 1.648286e-48 | -8.615850e-47 |
| Msa0725250 | Msa1019020 | 0.816777 | 4.642752e-52 | -8.615850e-47 |
| Msa0725250 | Msa1040120 | 0.811125 | 8.187629e-51 | -8.615850e-47 |
| Msa0725250 | Msa1097800 | 0.800800 | 1.216110e-48 | -8.615850e-47 |
| Msa0725250 | Msa1111110 | 0.827674 | 1.373252e-54 | -8.615850e-47 |
| Msa0725250 | Msa1116130 | -0.811098 | 8.299086e-51 | -8.615850e-47 |
| Msa0725250 | Msa1120530 | 0.807483 | 4.945638e-50 | -8.615850e-47 |
| Msa0725250 | Msa1147570 | 0.818867 | 1.566565e-52 | -8.615850e-47 |
| Msa0725250 | Msa1203250 | 0.813787 | 2.145087e-51 | -8.615850e-47 |
| Msa0725250 | Msa1208890 | -0.807684 | 4.482893e-50 | -8.615850e-47 |
| Msa0725250 | Msa1245940 | -0.808237 | 3.418786e-50 | -8.615850e-47 |
| Msa0725250 | Msa1259070 | -0.806922 | 6.501119e-50 | -8.615850e-47 |
| Msa0725250 | Msa1264020 | 0.813064 | 3.091546e-51 | -8.615850e-47 |
| Msa0725250 | Msa1283840 | 0.800934 | 1.141548e-48 | -8.615850e-47 |
| Msa0725250 | Msa1284260 | 0.811510 | 6.752988e-51 | -8.615850e-47 |
| Msa0725250 | Msa1327050 | 0.804436 | 2.161992e-49 | -8.615850e-47 |
| Msa0725250 | Msa1358870 | -0.800503 | 1.397966e-48 | -8.615850e-47 |
| Msa0725250 | Msa1373330 | 0.807416 | 5.109612e-50 | -8.615850e-47 |
| Msa0127660 | Msa0725250 | 0.809420 | 1.908627e-50 | -8.615850e-47 |
| Msa0179580 | Msa0725250 | 0.809316 | 2.010103e-50 | -8.615850e-47 |
| Msa0222920 | Msa0725250 | 0.815198 | 1.045571e-51 | -8.615850e-47 |
| Msa0414950 | Msa0725250 | -0.809435 | 1.895009e-50 | -8.615850e-47 |
| Msa0423040 | Msa0725250 | 0.805151 | 1.533059e-49 | -8.615850e-47 |
| Msa0469160 | Msa0725250 | 0.818341 | 2.061414e-52 | -8.615850e-47 |
| Msa0256510 | Msa0725250 | 0.808286 | 3.337209e-50 | -8.615850e-47 |
| Msa0272690 | Msa0725250 | 0.801814 | 7.538126e-49 | -8.615850e-47 |
| Msa0272720 | Msa0725250 | 0.804961 | 1.680190e-49 | -8.615850e-47 |
| Msa0311860 | Msa0725250 | 0.805656 | 1.201665e-49 | -8.615850e-47 |
| Msa0333720 | Msa0725250 | -0.812203 | 4.772329e-51 | -8.615850e-47 |
| Msa0334350 | Msa0725250 | 0.839950 | 1.166274e-57 | -8.615850e-47 |
| Msa0335040 | Msa0725250 | 0.816764 | 4.674491e-52 | -8.615850e-47 |
| Msa0337330 | Msa0725250 | 0.812543 | 4.021366e-51 | -8.615850e-47 |
| Msa0356890 | Msa0725250 | -0.815238 | 1.024224e-51 | -8.615850e-47 |
| Msa0511310 | Msa0725250 | 0.809893 | 1.510842e-50 | -8.615850e-47 |
| Msa0567020 | Msa0725250 | 0.802048 | 6.748053e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0725250 | MtrunA17_Chr7g0231591 | 94.162 | 531 | 16 | 2 | 1 | 516 | 1 | 531 | 0.0 | 1026 |
| Msa0725250 | MtrunA17_Chr5g0416881 | 93.785 | 531 | 18 | 2 | 1 | 516 | 1 | 531 | 0.0 | 1023 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0725250 | AT1G10520.1 | 66.920 | 526 | 143 | 8 | 9 | 516 | 17 | 529 | 0.0 | 702 |
| Msa0725250 | AT1G10520.2 | 67.028 | 461 | 129 | 7 | 9 | 459 | 17 | 464 | 0.0 | 616 |
Find 120 sgRNAs with CRISPR-Local
Find 473 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTATTTAATACATCATTTC+CGG | 0.208880 | 5_1:-24843537 | None:intergenic |
| GTGCAAACAATATCCTTATT+TGG | 0.209209 | 5_1:+24840999 | Msa0725250:CDS |
| TACTGGGAAGTTATCGAAAT+TGG | 0.228219 | 5_1:+24840737 | Msa0725250:CDS |
| AAAGGAGGTGTTTGAATTCT+TGG | 0.230184 | 5_1:+24844103 | Msa0725250:CDS |
| TATCCTTATTTGGAGAAGTA+TGG | 0.235042 | 5_1:+24841009 | Msa0725250:CDS |
| TAAGTTTGTAAAGCGTTTAA+AGG | 0.239187 | 5_1:+24842461 | Msa0725250:CDS |
| GTTGCACAGGGCACTGATTC+TGG | 0.246061 | 5_1:+24842993 | Msa0725250:intron |
| ACGGCATCGTATTGATTTAA+AGG | 0.249781 | 5_1:+24843061 | Msa0725250:CDS |
| CTTACAAATGCACAGAAGTT+AGG | 0.259195 | 5_1:+24841110 | Msa0725250:CDS |
| TGATGATACAGGATTGTTTC+CGG | 0.263795 | 5_1:+24843931 | Msa0725250:CDS |
| CCAAGAGACATATATGCTTT+TGG | 0.273472 | 5_1:+24843500 | Msa0725250:CDS |
| AGGATTGTTTCCGGCTATTC+AGG | 0.281116 | 5_1:+24843940 | Msa0725250:CDS |
| ACCCCATACTTCTCCAAATA+AGG | 0.283926 | 5_1:-24841012 | None:intergenic |
| AGTTCAAGCACGTAGATTAC+AGG | 0.290627 | 5_1:+24837072 | Msa0725250:CDS |
| AAGAAAATTATAGAGATATT+CGG | 0.294249 | 5_1:+24839969 | Msa0725250:CDS |
| CAATGAACTTGACACATCTT+TGG | 0.304248 | 5_1:+24839411 | Msa0725250:CDS |
| TTTCCGGCTATTCAGGGTTC+TGG | 0.309975 | 5_1:+24843947 | Msa0725250:CDS |
| TGAAATACTTTGATGATATC+AGG | 0.320281 | 5_1:+24841135 | Msa0725250:CDS |
| AACAAAGTGATGTAAAGAAT+TGG | 0.357436 | 5_1:+24844469 | Msa0725250:three_prime_UTR |
| TTGGATCCTGCGCCAATTGA+TGG | 0.365353 | 5_1:+24839430 | Msa0725250:CDS |
| TGTCTTCCAGCCACTGATAA+AGG | 0.367878 | 5_1:-24839318 | None:intergenic |
| GGCTATCAAATTCATGCAAA+AGG | 0.369500 | 5_1:-24837278 | None:intergenic |
| TCTACGTGCTTGAACTCCTT+TGG | 0.370583 | 5_1:-24837065 | None:intergenic |
| AGAAAATTATAGAGATATTC+GGG | 0.388926 | 5_1:+24839970 | Msa0725250:CDS |
| CCAAAAGCATATATGTCTCT+TGG | 0.394703 | 5_1:-24843500 | None:intergenic |
| AAGGAGGTGTTTGAATTCTT+GGG | 0.401938 | 5_1:+24844104 | Msa0725250:CDS |
| TTGAATTCTTGGGCTTTCCC+TGG | 0.403703 | 5_1:+24844114 | Msa0725250:CDS |
| TTTGGAGAAGTATGGGGTAT+AGG | 0.413247 | 5_1:+24841017 | Msa0725250:CDS |
| AACGTTTGTCACGGTTCAAA+GGG | 0.424230 | 5_1:+24837301 | Msa0725250:CDS |
| CTGGAAGACAGCTTAAAATC+AGG | 0.425823 | 5_1:+24839331 | Msa0725250:CDS |
| TTTAAACGCTTTACAAACTT+AGG | 0.426813 | 5_1:-24842459 | None:intergenic |
| TACAATTTCAGTGCTGTGGC+TGG | 0.430990 | 5_1:-24841041 | None:intergenic |
| CTCATACAATTTCAGTGCTG+TGG | 0.441654 | 5_1:-24841045 | None:intergenic |
| GGATTCCGTCTTGATGATAC+AGG | 0.444054 | 5_1:+24843920 | Msa0725250:CDS |
| AAGCAGTACCTTGTTCCATC+TGG | 0.448853 | 5_1:-24841823 | None:intergenic |
| CCCTTCAATTGGAAAATCAA+TGG | 0.452558 | 5_1:+24840221 | Msa0725250:CDS |
| ATTTAGGTTACGATTATTTG+TGG | 0.453236 | 5_1:+24841742 | Msa0725250:intron |
| CAAAAGCATATATGTCTCTT+GGG | 0.453590 | 5_1:-24843499 | None:intergenic |
| TATGAAGTTGTATACTGAAA+AGG | 0.454044 | 5_1:+24844085 | Msa0725250:CDS |
| TCTTTCATGTGGTTCAAGCC+AGG | 0.454192 | 5_1:-24844132 | None:intergenic |
| GGATTGTTTCCGGCTATTCA+GGG | 0.458845 | 5_1:+24843941 | Msa0725250:CDS |
| TTCAGGGTTCTGGTGGCAAA+CGG | 0.463820 | 5_1:+24843957 | Msa0725250:CDS |
| ATCCTTATTTGGAGAAGTAT+GGG | 0.471970 | 5_1:+24841010 | Msa0725250:CDS |
| CTAGAAAGGCTACCATCAAT+TGG | 0.472553 | 5_1:-24839442 | None:intergenic |
| ATTCAGGAGATAATCACTAC+TGG | 0.473756 | 5_1:+24840720 | Msa0725250:CDS |
| TTACAAATGCACAGAAGTTA+GGG | 0.475021 | 5_1:+24841111 | Msa0725250:CDS |
| ACTTCTCCTTTATCAGTGGC+TGG | 0.477236 | 5_1:+24839312 | Msa0725250:CDS |
| AATAGCCTTGTAATAGCTAA+AGG | 0.482573 | 5_1:-24840142 | None:intergenic |
| GAAAGAAATCTCTAATTTCG+AGG | 0.483308 | 5_1:+24844149 | Msa0725250:exon |
| CCTATCCTGGACGGGAGTTA+CGG | 0.484123 | 5_1:+24843042 | Msa0725250:CDS |
| ACACTTTGAAACCGATGAAA+AGG | 0.485147 | 5_1:+24840761 | Msa0725250:CDS |
| CAACGTTTGTCACGGTTCAA+AGG | 0.485272 | 5_1:+24837300 | Msa0725250:CDS |
| TTTGGACTTGTAGCTTGGAC+CGG | 0.485979 | 5_1:+24843518 | Msa0725250:CDS |
| TCAGGGTTCTGGTGGCAAAC+GGG | 0.489085 | 5_1:+24843958 | Msa0725250:CDS |
| TCTGGTGTTGATACATACTT+TGG | 0.494489 | 5_1:+24843011 | Msa0725250:CDS |
| GGATCTGTATGTACTGAAGT+TGG | 0.502791 | 5_1:+24839369 | Msa0725250:CDS |
| TAAGATTTGGAAGCAGAGAA+TGG | 0.503989 | 5_1:+24837182 | Msa0725250:intron |
| GCACTGAAATTGTATGAGAA+AGG | 0.507856 | 5_1:+24841050 | Msa0725250:CDS |
| CTTTCATGTGGTTCAAGCCA+GGG | 0.508531 | 5_1:-24844131 | None:intergenic |
| TGATAGCATTGGGTGAGGAC+CGG | 0.512254 | 5_1:+24840115 | Msa0725250:intron |
| CCACCAGAACCCTGAATAGC+CGG | 0.512522 | 5_1:-24843950 | None:intergenic |
| TAATATCTTGCAGTCACAAA+GGG | 0.517189 | 5_1:+24842430 | Msa0725250:intron |
| GCTATCAAATTCATGCAAAA+GGG | 0.518660 | 5_1:-24837277 | None:intergenic |
| ACTGCTGAGGTTCACTAGAA+AGG | 0.520959 | 5_1:-24839456 | None:intergenic |
| GTTGTCTACTTTGTCTCCAA+AGG | 0.522654 | 5_1:+24837049 | Msa0725250:CDS |
| ACCATTTAAAATTGAAAGTG+CGG | 0.528259 | 5_1:+24840182 | Msa0725250:CDS |
| TGAAAATCAAATCCTCCCTC+AGG | 0.529626 | 5_1:-24842494 | None:intergenic |
| CCGTAACTCCCGTCCAGGAT+AGG | 0.532700 | 5_1:-24843042 | None:intergenic |
| TGTAATAGCTAAAGGATCTC+CGG | 0.539025 | 5_1:-24840134 | None:intergenic |
| TTTAGGTCAGGTGGGCAGTA+CGG | 0.541362 | 5_1:-24839945 | None:intergenic |
| GCAGATGGGTGGTGTGATAG+AGG | 0.541937 | 5_1:+24837206 | Msa0725250:CDS |
| CCGGCTATTCAGGGTTCTGG+TGG | 0.544874 | 5_1:+24843950 | Msa0725250:CDS |
| AAACTTGTGAACATATATAG+AGG | 0.548302 | 5_1:+24839993 | Msa0725250:CDS |
| TGGAAGACAGCTTAAAATCA+GGG | 0.553721 | 5_1:+24839332 | Msa0725250:CDS |
| AATTGGAACAATATGCAGAA+TGG | 0.553900 | 5_1:+24844486 | Msa0725250:three_prime_UTR |
| AGTCACTTCTCCTTTATCAG+TGG | 0.559610 | 5_1:+24839308 | Msa0725250:intron |
| CGATGCCGTAACTCCCGTCC+AGG | 0.564995 | 5_1:-24843047 | None:intergenic |
| GAGATCCTTTAGCTATTACA+AGG | 0.566604 | 5_1:+24840137 | Msa0725250:CDS |
| GACGTGGAAAAGCTACCTGC+GGG | 0.567421 | 5_1:+24841776 | Msa0725250:CDS |
| AGACAGCAAGCAGAATCTAA+AGG | 0.568263 | 5_1:+24843899 | Msa0725250:intron |
| AATTAGAGATTTCTTTCATG+TGG | 0.571687 | 5_1:-24844143 | None:intergenic |
| GAAGTTGTATACTGAAAAGG+AGG | 0.575609 | 5_1:+24844088 | Msa0725250:CDS |
| AGGCTACCATCAATTGGCGC+AGG | 0.583714 | 5_1:-24839436 | None:intergenic |
| GCCGTGTTTGTTGATGAAAG+TGG | 0.585965 | 5_1:-24839562 | None:intergenic |
| TTGATAGCCAACGTTTGTCA+CGG | 0.586367 | 5_1:+24837292 | Msa0725250:CDS |
| GAAGCAGAGAATGGTGCAGA+TGG | 0.586579 | 5_1:+24837191 | Msa0725250:CDS |
| TTTCAGTAATCACAGTGAAG+AGG | 0.591505 | 5_1:+24842512 | Msa0725250:CDS |
| GAAGATCAAATCATCTTCTG+AGG | 0.594043 | 5_1:+24839489 | Msa0725250:CDS |
| TCATTGATACCTTCACCTTG+AGG | 0.594078 | 5_1:-24839394 | None:intergenic |
| CTTTGAACCGTGACAAACGT+TGG | 0.595100 | 5_1:-24837299 | None:intergenic |
| ATCATTATAACACATCCAGA+TGG | 0.600856 | 5_1:+24841808 | Msa0725250:CDS |
| AATGATATCAATGTCCCCGC+AGG | 0.602984 | 5_1:-24841791 | None:intergenic |
| GGATATGAGTTTCCTGAGGG+AGG | 0.604005 | 5_1:+24842482 | Msa0725250:CDS |
| ACAAACACGGCAAGCAGTCA+TGG | 0.608029 | 5_1:+24839574 | Msa0725250:CDS |
| GTCAGGTGGGCAGTACGGCA+AGG | 0.608395 | 5_1:-24839940 | None:intergenic |
| AAAGGATATGAGTTTCCTGA+GGG | 0.611382 | 5_1:+24842479 | Msa0725250:CDS |
| TTAATATCTTGCAGTCACAA+AGG | 0.614094 | 5_1:+24842429 | Msa0725250:intron |
| TAGGTTACGATTATTTGTGG+AGG | 0.617003 | 5_1:+24841745 | Msa0725250:intron |
| TAAAGGATATGAGTTTCCTG+AGG | 0.617066 | 5_1:+24842478 | Msa0725250:CDS |
| TTCAGGAGATAATCACTACT+GGG | 0.617881 | 5_1:+24840721 | Msa0725250:CDS |
| ACTTTGATGATATCAGGCAT+CGG | 0.619319 | 5_1:+24841141 | Msa0725250:CDS |
| TTCAATTGGAAAATCAATGG+AGG | 0.622193 | 5_1:+24840224 | Msa0725250:CDS |
| AAGTTGGATCCTCAAGGTGA+AGG | 0.622561 | 5_1:+24839385 | Msa0725250:CDS |
| TCCTTATTTGGAGAAGTATG+GGG | 0.630314 | 5_1:+24841011 | Msa0725250:CDS |
| ACAATCCTGTATCATCAAGA+CGG | 0.630780 | 5_1:-24843925 | None:intergenic |
| ACCAGACAGACCTCATGGCG+TGG | 0.633709 | 5_1:-24841167 | None:intergenic |
| TAACACATCCAGATGGAACA+AGG | 0.636570 | 5_1:+24841815 | Msa0725250:CDS |
| ACACCTTGATTCTGAAAATG+CGG | 0.642653 | 5_1:+24839636 | Msa0725250:CDS |
| ATGTTTGATAGCATTGGGTG+AGG | 0.651460 | 5_1:+24840110 | Msa0725250:intron |
| ACCACTTTCATCAACAAACA+CGG | 0.653868 | 5_1:+24839561 | Msa0725250:CDS |
| ATCAGGGGAGAAACTATCAG+AGG | 0.663549 | 5_1:+24839348 | Msa0725250:CDS |
| GCATCGGATTCCACGCCATG+AGG | 0.666840 | 5_1:+24841157 | Msa0725250:CDS |
| GGAAGACAGCTTAAAATCAG+GGG | 0.670590 | 5_1:+24839333 | Msa0725250:CDS |
| CAGAGAATGGTGCAGATGGG+TGG | 0.677300 | 5_1:+24837195 | Msa0725250:CDS |
| GTACTGAAGTTGGATCCTCA+AGG | 0.679360 | 5_1:+24839379 | Msa0725250:CDS |
| AAGCAGAGAATGGTGCAGAT+GGG | 0.680844 | 5_1:+24837192 | Msa0725250:CDS |
| AGACGTGGAAAAGCTACCTG+CGG | 0.682264 | 5_1:+24841775 | Msa0725250:CDS |
| ACGTTTGTCACGGTTCAAAG+GGG | 0.684948 | 5_1:+24837302 | Msa0725250:CDS |
| TGTGGAGGATCATATAGACG+TGG | 0.744957 | 5_1:+24841760 | Msa0725250:CDS |
| ACGTGGAAAAGCTACCTGCG+GGG | 0.767430 | 5_1:+24841777 | Msa0725250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAATTAAAATTAA+AGG | - | chr5_1:24842809-24842828 | None:intergenic | 0.0% |
| !!! | TATAATAATTTTAAAATTAA+AGG | - | chr5_1:24842839-24842858 | None:intergenic | 0.0% |
| !! | ATTTATTATCTATTAGAATT+TGG | - | chr5_1:24837456-24837475 | None:intergenic | 10.0% |
| !! | AATTCTAATAGATAATAAAT+TGG | + | chr5_1:24837456-24837475 | Msa0725250:intron | 10.0% |
| !! | ATTCTAATAGATAATAAATT+GGG | + | chr5_1:24837457-24837476 | Msa0725250:intron | 10.0% |
| !! | AATTAGAAATAATTTACATT+TGG | - | chr5_1:24838194-24838213 | None:intergenic | 10.0% |
| !!! | TACAACAAATTTTAAAATAT+GGG | - | chr5_1:24839024-24839043 | None:intergenic | 10.0% |
| !!! | ATACAACAAATTTTAAAATA+TGG | - | chr5_1:24839025-24839044 | None:intergenic | 10.0% |
| !!! | ATTTATTTTATTCATTGTAA+AGG | + | chr5_1:24840571-24840590 | Msa0725250:intron | 10.0% |
| !!! | TTTATTTTATTCATTGTAAA+GGG | + | chr5_1:24840572-24840591 | Msa0725250:intron | 10.0% |
| !!! | TTTTTAATGTTATCTTTTAT+TGG | + | chr5_1:24840871-24840890 | Msa0725250:intron | 10.0% |
| !!! | AAATTGATAATCTTAAAATA+AGG | + | chr5_1:24842666-24842685 | Msa0725250:intron | 10.0% |
| !!! | TTACACATTTTCATTTTTAT+TGG | + | chr5_1:24839268-24839287 | Msa0725250:intron | 15.0% |
| !!! | TTTAATTTTAGATTATCGAT+TGG | + | chr5_1:24839785-24839804 | Msa0725250:intron | 15.0% |
| !! | AAGAAAATTATAGAGATATT+CGG | + | chr5_1:24839969-24839988 | Msa0725250:CDS | 15.0% |
| !! | TTAATACAAACATATGAATT+TGG | + | chr5_1:24840610-24840629 | Msa0725250:intron | 15.0% |
| !! | TAATTATTCAGCAATTTATT+TGG | + | chr5_1:24840659-24840678 | Msa0725250:intron | 15.0% |
| !! | TTAAAATGTCAAAATATACA+AGG | - | chr5_1:24840929-24840948 | None:intergenic | 15.0% |
| !! | ATTATGTTACTCATATATTT+GGG | + | chr5_1:24841550-24841569 | Msa0725250:intron | 15.0% |
| !! | AATATTACCATATTCTATAT+TGG | - | chr5_1:24842084-24842103 | None:intergenic | 15.0% |
| !!! | TTTATACATTTTTCCAATAA+TGG | - | chr5_1:24842297-24842316 | None:intergenic | 15.0% |
| !! | AATATTAGTAGATATTGAAT+CGG | - | chr5_1:24842880-24842899 | None:intergenic | 15.0% |
| !! | AAAATTGAAAATTAATACCA+AGG | - | chr5_1:24843296-24843315 | None:intergenic | 15.0% |
| !!! | GATTGTTTTTAAATATATAG+TGG | + | chr5_1:24843649-24843668 | Msa0725250:intron | 15.0% |
| !! | TTATCTATTAGAATTTGGAT+TGG | - | chr5_1:24837451-24837470 | None:intergenic | 20.0% |
| !! | GATTAGAAATCATTTACATT+TGG | + | chr5_1:24837955-24837974 | Msa0725250:intron | 20.0% |
| !! | TTTGTCTCAATTATCAATTA+TGG | - | chr5_1:24838037-24838056 | None:intergenic | 20.0% |
| !! | GACAAAGTAAATAAATTACA+TGG | + | chr5_1:24838051-24838070 | Msa0725250:intron | 20.0% |
| !! | GACAAAGTAAATAAATTACA+TGG | - | chr5_1:24838051-24838070 | None:intergenic | 20.0% |
| !! | TATTTACTTTGTCTCAATTA+TGG | + | chr5_1:24838112-24838131 | Msa0725250:intron | 20.0% |
| !!! | TCATTTTTGACTCAAAAAAT+TGG | + | chr5_1:24838592-24838611 | Msa0725250:intron | 20.0% |
| !! | TTGAAATTTCGATTAATTGA+TGG | + | chr5_1:24838908-24838927 | Msa0725250:intron | 20.0% |
| !!! | TCATTGATATTGAAAAGTAT+TGG | + | chr5_1:24839048-24839067 | Msa0725250:intron | 20.0% |
| !!! | CATTGATATTGAAAAGTATT+GGG | + | chr5_1:24839049-24839068 | Msa0725250:intron | 20.0% |
| !!! | TCTCTATAATTTTCTTGTTT+AGG | - | chr5_1:24839965-24839984 | None:intergenic | 20.0% |
| !! | AGAAAATTATAGAGATATTC+GGG | + | chr5_1:24839970-24839989 | Msa0725250:CDS | 20.0% |
| !!! | TCAATTTGCTAATAACTTAA+CGG | + | chr5_1:24840323-24840342 | Msa0725250:intron | 20.0% |
| !!! | ACTTTTAGAAAGTTTGTTTT+AGG | + | chr5_1:24840452-24840471 | Msa0725250:intron | 20.0% |
| !!! | CTACATTTTTTCTTTTTATC+AGG | + | chr5_1:24840540-24840559 | Msa0725250:intron | 20.0% |
| !! | TCATATGTTTGTATTAACAT+TGG | - | chr5_1:24840607-24840626 | None:intergenic | 20.0% |
| !! | AAATTGCTGAATAATTACAT+AGG | - | chr5_1:24840656-24840675 | None:intergenic | 20.0% |
| !! | CATTATGTTACTCATATATT+TGG | + | chr5_1:24841549-24841568 | Msa0725250:intron | 20.0% |
| !! | AGCAATAAATAAAAAGACTT+TGG | - | chr5_1:24841666-24841685 | None:intergenic | 20.0% |
| !!! | AGAATATGGTAATATTTTGT+TGG | + | chr5_1:24842088-24842107 | Msa0725250:intron | 20.0% |
| !! | TGTGTTATGAAATGTTAAAT+AGG | + | chr5_1:24842217-24842236 | Msa0725250:intron | 20.0% |
| !!! | CTACAAATGGTATTTTTATT+TGG | + | chr5_1:24842564-24842583 | Msa0725250:intron | 20.0% |
| !!! | TATGATGGATTTTAATGTTT+TGG | + | chr5_1:24843468-24843487 | Msa0725250:intron | 20.0% |
| !!! | AATATATAGTGGATTGTTAA+TGG | + | chr5_1:24843660-24843679 | Msa0725250:intron | 20.0% |
| ! | GAAAATGAAAGATAGAAAGT+GGG | - | chr5_1:24837112-24837131 | None:intergenic | 25.0% |
| ! | TGAAAATGAAAGATAGAAAG+TGG | - | chr5_1:24837113-24837132 | None:intergenic | 25.0% |
| !! | TTTTGTGTGTTTGTAAGATT+TGG | + | chr5_1:24837169-24837188 | Msa0725250:intron | 25.0% |
| ! | AATAGATAATAAATTGGGTC+AGG | + | chr5_1:24837462-24837481 | Msa0725250:intron | 25.0% |
| !!! | CTCATTTTTCACTCAAAAAT+TGG | - | chr5_1:24837592-24837611 | None:intergenic | 25.0% |
| !!! | AAAAAAAAAACTTGCTGAGT+TGG | + | chr5_1:24837637-24837656 | Msa0725250:intron | 25.0% |
| !! | TTTTATACATAGAGAAGAGT+AGG | - | chr5_1:24837786-24837805 | None:intergenic | 25.0% |
| ! | TAATGAGCATGTAAATTACA+TGG | + | chr5_1:24838075-24838094 | Msa0725250:intron | 25.0% |
| ! | ATAAACAACACATTTAAACC+AGG | + | chr5_1:24838235-24838254 | Msa0725250:intron | 25.0% |
| ! | TGTAGAATAGTGAAACAAAT+CGG | - | chr5_1:24838335-24838354 | None:intergenic | 25.0% |
| ! | ATACTTATCTACTGTCATAT+TGG | + | chr5_1:24838761-24838780 | Msa0725250:intron | 25.0% |
| ! | ACAATAAGCAGATACTTATA+GGG | - | chr5_1:24838788-24838807 | None:intergenic | 25.0% |
| !! | ACACTAACTCTTTTCTTATA+GGG | - | chr5_1:24838820-24838839 | None:intergenic | 25.0% |
| !!! | AAAATATGGGTCTTTTTTGT+TGG | - | chr5_1:24839011-24839030 | None:intergenic | 25.0% |
| !!! | GATTATGTGTTATTTGTACA+TGG | - | chr5_1:24839203-24839222 | None:intergenic | 25.0% |
| !! | TTTTTGTCAAGTTTATCTAG+AGG | - | chr5_1:24839726-24839745 | None:intergenic | 25.0% |
| !!! | AATTTTAGATTATCGATTGG+AGG | + | chr5_1:24839788-24839807 | Msa0725250:intron | 25.0% |
| !!! | ATTTTAGATTATCGATTGGA+GGG | + | chr5_1:24839789-24839808 | Msa0725250:intron | 25.0% |
| ! | ATGATAGATAAGTTTCAACA+AGG | - | chr5_1:24839900-24839919 | None:intergenic | 25.0% |
| !!! | ATAATTTTCTTGTTTAGGTC+AGG | - | chr5_1:24839960-24839979 | None:intergenic | 25.0% |
| ! | AAACTTGTGAACATATATAG+AGG | + | chr5_1:24839993-24840012 | Msa0725250:CDS | 25.0% |
| !! | TGAACATATATAGAGGTATA+AGG | + | chr5_1:24840000-24840019 | Msa0725250:intron | 25.0% |
| !!! | GGGGTTTTTTTTTTTTTTTC+CGG | + | chr5_1:24840046-24840065 | Msa0725250:intron | 25.0% |
| !! | TAATGATGTTTGATAGCATT+GGG | + | chr5_1:24840105-24840124 | Msa0725250:intron | 25.0% |
| !! | ACCATTTAAAATTGAAAGTG+CGG | + | chr5_1:24840182-24840201 | Msa0725250:CDS | 25.0% |
| !! | TTTTATTCATTGTAAAGGGA+AGG | + | chr5_1:24840576-24840595 | Msa0725250:intron | 25.0% |
| !! | AGGAATTAATACCTTTTCAT+CGG | - | chr5_1:24840775-24840794 | None:intergenic | 25.0% |
| !!! | ATGAAAAGGTATTAATTCCT+TGG | + | chr5_1:24840775-24840794 | Msa0725250:intron | 25.0% |
| !!! | GATGCAAAAGTGTTTAAAAA+AGG | - | chr5_1:24840801-24840820 | None:intergenic | 25.0% |
| ! | ATCTGATTCAATTCAACAAT+AGG | + | chr5_1:24840977-24840996 | Msa0725250:intron | 25.0% |
| !! | TGAAATACTTTGATGATATC+AGG | + | chr5_1:24841135-24841154 | Msa0725250:CDS | 25.0% |
| ! | GGGAAATAATAGTGTATAAA+AGG | - | chr5_1:24841197-24841216 | None:intergenic | 25.0% |
| !! | TTAAAACGAGTACGTTTTTA+GGG | - | chr5_1:24841217-24841236 | None:intergenic | 25.0% |
| !! | ATTAAAACGAGTACGTTTTT+AGG | - | chr5_1:24841218-24841237 | None:intergenic | 25.0% |
| !!! | AAAAGAGCATCAGTAATTTT+GGG | - | chr5_1:24841244-24841263 | None:intergenic | 25.0% |
| !!! | AAAAAGAGCATCAGTAATTT+TGG | - | chr5_1:24841245-24841264 | None:intergenic | 25.0% |
| ! | TGAAATATGTCAACATACTT+TGG | + | chr5_1:24841412-24841431 | Msa0725250:intron | 25.0% |
| ! | GAAATATGTCAACATACTTT+GGG | + | chr5_1:24841413-24841432 | Msa0725250:intron | 25.0% |
| !! | ATTTAGGTTACGATTATTTG+TGG | + | chr5_1:24841742-24841761 | Msa0725250:intron | 25.0% |
| ! | CAAACTACCAATATAGAATA+TGG | + | chr5_1:24842074-24842093 | Msa0725250:intron | 25.0% |
| ! | TTTAAACGCTTTACAAACTT+AGG | - | chr5_1:24842462-24842481 | None:intergenic | 25.0% |
| !! | TAAGTTTGTAAAGCGTTTAA+AGG | + | chr5_1:24842461-24842480 | Msa0725250:CDS | 25.0% |
| ! | TTATTGTCTTTGTCTACAAA+TGG | + | chr5_1:24842551-24842570 | Msa0725250:intron | 25.0% |
| !!! | CACTTATTTTAGATGTTATC+AGG | - | chr5_1:24842603-24842622 | None:intergenic | 25.0% |
| !! | CATTTTATGACAGTATTCAA+TGG | - | chr5_1:24843348-24843367 | None:intergenic | 25.0% |
| ! | CCTATTTAATACATCATTTC+CGG | - | chr5_1:24843540-24843559 | None:intergenic | 25.0% |
| ! | GAAATGATGTATTAAATAGG+AGG | + | chr5_1:24843540-24843559 | Msa0725250:intron | 25.0% |
| ! | AATGGAAAGTTCAAAGTAAA+AGG | - | chr5_1:24843577-24843596 | None:intergenic | 25.0% |
| !! | CAAATTGGTAATCATAAGTA+TGG | - | chr5_1:24843779-24843798 | None:intergenic | 25.0% |
| ! | CATACTTATGATTACCAATT+TGG | + | chr5_1:24843777-24843796 | Msa0725250:intron | 25.0% |
| ! | ATTTCATTGTGATCTATAGT+TGG | + | chr5_1:24843830-24843849 | Msa0725250:intron | 25.0% |
| ! | TTTCATTGTGATCTATAGTT+GGG | + | chr5_1:24843831-24843850 | Msa0725250:intron | 25.0% |
| ! | TATGAAGTTGTATACTGAAA+AGG | + | chr5_1:24844085-24844104 | Msa0725250:CDS | 25.0% |
| ! | AATTAGAGATTTCTTTCATG+TGG | - | chr5_1:24844146-24844165 | None:intergenic | 25.0% |
| !! | TCCAATCTGTATTTTTCATT+GGG | + | chr5_1:24844283-24844302 | Msa0725250:intron | 25.0% |
| ! | TGCTTTGTAAATACATATGT+TGG | + | chr5_1:24844309-24844328 | Msa0725250:intron | 25.0% |
| ! | GCTTTGTAAATACATATGTT+GGG | + | chr5_1:24844310-24844329 | Msa0725250:intron | 25.0% |
| ! | AGATTTGCCTACAATTTATT+TGG | + | chr5_1:24844423-24844442 | Msa0725250:intron | 25.0% |
| ! | CATTGAACCAAATAAATTGT+AGG | - | chr5_1:24844433-24844452 | None:intergenic | 25.0% |
| ! | AACAAAGTGATGTAAAGAAT+TGG | + | chr5_1:24844469-24844488 | Msa0725250:three_prime_UTR | 25.0% |
| AAGAAAAATGCAGAGCAAAA+TGG | + | chr5_1:24837010-24837029 | Msa0725250:CDS | 30.0% | |
| !! | AAATGGAATGTTTTCTGGTA+TGG | + | chr5_1:24837027-24837046 | Msa0725250:CDS | 30.0% |
| ! | TAGAGGAACGATTTTCAAAA+CGG | + | chr5_1:24837223-24837242 | Msa0725250:CDS | 30.0% |
| GCTATCAAATTCATGCAAAA+GGG | - | chr5_1:24837280-24837299 | None:intergenic | 30.0% | |
| ! | CGAATGGTTAATAGTCATTT+TGG | + | chr5_1:24837507-24837526 | Msa0725250:intron | 30.0% |
| TGTTATGTGCATCAGATTAT+GGG | - | chr5_1:24837684-24837703 | None:intergenic | 30.0% | |
| ! | TTTTCTATAGAGAGAAGAGT+AGG | + | chr5_1:24838384-24838403 | Msa0725250:intron | 30.0% |
| TAGCACTATTCAGTTACTAT+AGG | + | chr5_1:24838491-24838510 | Msa0725250:intron | 30.0% | |
| ACAGTAGATAAGTATACTGA+GGG | - | chr5_1:24838756-24838775 | None:intergenic | 30.0% | |
| GACAATAAGCAGATACTTAT+AGG | - | chr5_1:24838789-24838808 | None:intergenic | 30.0% | |
| ! | GACACTAACTCTTTTCTTAT+AGG | - | chr5_1:24838821-24838840 | None:intergenic | 30.0% |
| GTGAAACCAAGAAATACATT+TGG | - | chr5_1:24839114-24839133 | None:intergenic | 30.0% | |
| TGGTTTCACTCTTGTATATA+AGG | + | chr5_1:24839125-24839144 | Msa0725250:intron | 30.0% | |
| AGTGATTGAAGTCAAAGTAA+AGG | + | chr5_1:24839173-24839192 | Msa0725250:intron | 30.0% | |
| GTGATTGAAGTCAAAGTAAA+GGG | + | chr5_1:24839174-24839193 | Msa0725250:intron | 30.0% | |
| !!! | TTCTTATTTTGTAACTGCTG+AGG | - | chr5_1:24839472-24839491 | None:intergenic | 30.0% |
| TGTAAACCTTAAAAGTAGTG+AGG | + | chr5_1:24839522-24839541 | Msa0725250:intron | 30.0% | |
| !! | TTCTATCCTCACTACTTTTA+AGG | - | chr5_1:24839531-24839550 | None:intergenic | 30.0% |
| GCAAATAATCTTCAACTGTA+GGG | - | chr5_1:24839677-24839696 | None:intergenic | 30.0% | |
| AGCAAATAATCTTCAACTGT+AGG | - | chr5_1:24839678-24839697 | None:intergenic | 30.0% | |
| GTTTATCTAGAGGAAAGTTT+CGG | - | chr5_1:24839716-24839735 | None:intergenic | 30.0% | |
| TGGAGGGAAATTAATGTAAA+TGG | + | chr5_1:24839805-24839824 | Msa0725250:intron | 30.0% | |
| ! | CTAATGATGTTTGATAGCAT+TGG | + | chr5_1:24840104-24840123 | Msa0725250:intron | 30.0% |
| !! | AATAGCCTTGTAATAGCTAA+AGG | - | chr5_1:24840145-24840164 | None:intergenic | 30.0% |
| ! | TCCGCACTTTCAATTTTAAA+TGG | - | chr5_1:24840186-24840205 | None:intergenic | 30.0% |
| ATAAAAAACCTCCCTTCAAT+TGG | + | chr5_1:24840210-24840229 | Msa0725250:CDS | 30.0% | |
| !!! | CCATTGATTTTCCAATTGAA+GGG | - | chr5_1:24840224-24840243 | None:intergenic | 30.0% |
| !!! | TCCATTGATTTTCCAATTGA+AGG | - | chr5_1:24840225-24840244 | None:intergenic | 30.0% |
| TTCAATTGGAAAATCAATGG+AGG | + | chr5_1:24840224-24840243 | Msa0725250:CDS | 30.0% | |
| GCAAATTGACATTCAAACAA+GGG | - | chr5_1:24840312-24840331 | None:intergenic | 30.0% | |
| AGCAAATTGACATTCAAACA+AGG | - | chr5_1:24840313-24840332 | None:intergenic | 30.0% | |
| GCTATAGTGACATATTTGTT+TGG | + | chr5_1:24840491-24840510 | Msa0725250:intron | 30.0% | |
| ATTCAGCAATTTATTTGGTC+AGG | + | chr5_1:24840664-24840683 | Msa0725250:intron | 30.0% | |
| ! | TTTTTACTGTGTTCAGATTC+AGG | + | chr5_1:24840704-24840723 | Msa0725250:intron | 30.0% |
| ! | AAAGTGTTTAAAAAAGGCCA+AGG | - | chr5_1:24840795-24840814 | None:intergenic | 30.0% |
| GAATCAGATTGAAGACAATA+AGG | - | chr5_1:24840966-24840985 | None:intergenic | 30.0% | |
| GTGCAAACAATATCCTTATT+TGG | + | chr5_1:24840999-24841018 | Msa0725250:CDS | 30.0% | |
| ! | TATCCTTATTTGGAGAAGTA+TGG | + | chr5_1:24841009-24841028 | Msa0725250:CDS | 30.0% |
| ! | ATCCTTATTTGGAGAAGTAT+GGG | + | chr5_1:24841010-24841029 | Msa0725250:CDS | 30.0% |
| TTACAAATGCACAGAAGTTA+GGG | + | chr5_1:24841111-24841130 | Msa0725250:CDS | 30.0% | |
| !!! | GATGCTCTTTTTGATTTGAT+AGG | + | chr5_1:24841253-24841272 | Msa0725250:intron | 30.0% |
| !!! | CTTTTTGATTTGATAGGTTC+AGG | + | chr5_1:24841259-24841278 | Msa0725250:intron | 30.0% |
| ! | AAACAGATTTTGCAGAAAGT+TGG | + | chr5_1:24841287-24841306 | Msa0725250:CDS | 30.0% |
| ! | AACAGATTTTGCAGAAAGTT+GGG | + | chr5_1:24841288-24841307 | Msa0725250:CDS | 30.0% |
| GTATGATTTCAAAACAAGAC+AGG | - | chr5_1:24841509-24841528 | None:intergenic | 30.0% | |
| !!! | ACAGTGGATTTTAGAATCTA+GGG | - | chr5_1:24841578-24841597 | None:intergenic | 30.0% |
| ACTCTGCTACTAATTCATTT+AGG | + | chr5_1:24841726-24841745 | Msa0725250:intron | 30.0% | |
| ATCATTATAACACATCCAGA+TGG | + | chr5_1:24841808-24841827 | Msa0725250:CDS | 30.0% | |
| ACATTTAACTGCGTATTTCT+CGG | - | chr5_1:24841869-24841888 | None:intergenic | 30.0% | |
| ! | TTGAAAAGCAGATTTTCAGT+TGG | - | chr5_1:24841907-24841926 | None:intergenic | 30.0% |
| GACATTATAACCTTAAGAGA+CGG | - | chr5_1:24842055-24842074 | None:intergenic | 30.0% | |
| ! | TAAAGCTAGCTTACTTCTAA+AGG | - | chr5_1:24842162-24842181 | None:intergenic | 30.0% |
| ! | TTTTGCTCTGATTGATTGAA+TGG | + | chr5_1:24842190-24842209 | Msa0725250:intron | 30.0% |
| AAAAGGGACAAAATACATGA+AGG | - | chr5_1:24842269-24842288 | None:intergenic | 30.0% | |
| ! | TCCAATAATGGAGATGAAAA+GGG | - | chr5_1:24842285-24842304 | None:intergenic | 30.0% |
| ! | TTCCAATAATGGAGATGAAA+AGG | - | chr5_1:24842286-24842305 | None:intergenic | 30.0% |
| CTTGTAGTACATTAGTTAAG+AGG | + | chr5_1:24842393-24842412 | Msa0725250:intron | 30.0% | |
| TTAATATCTTGCAGTCACAA+AGG | + | chr5_1:24842429-24842448 | Msa0725250:intron | 30.0% | |
| TAATATCTTGCAGTCACAAA+GGG | + | chr5_1:24842430-24842449 | Msa0725250:intron | 30.0% | |
| !! | TCATGTAAGTTCTAAATGCA+AGG | - | chr5_1:24842629-24842648 | None:intergenic | 30.0% |
| AACCATCATCCTATTCTATA+AGG | + | chr5_1:24842743-24842762 | Msa0725250:intron | 30.0% | |
| TTATGAGCTCCTTATAGAAT+AGG | - | chr5_1:24842755-24842774 | None:intergenic | 30.0% | |
| GATAGCACTATCTTAAATAG+AGG | - | chr5_1:24842784-24842803 | None:intergenic | 30.0% | |
| !! | ATTGACTTGCATACAATGAA+AGG | - | chr5_1:24842942-24842961 | None:intergenic | 30.0% |
| !! | TTACGTTGTACTTTGTTGTT+TGG | + | chr5_1:24843395-24843414 | Msa0725250:intron | 30.0% |
| GAACTATGGATGTTAAAAGT+TGG | - | chr5_1:24843421-24843440 | None:intergenic | 30.0% | |
| !!! | ATGGATTTTAATGTTTTGGC+AGG | + | chr5_1:24843472-24843491 | Msa0725250:intron | 30.0% |
| ! | CAAAAGCATATATGTCTCTT+GGG | - | chr5_1:24843502-24843521 | None:intergenic | 30.0% |
| CCGGAAATGATGTATTAAAT+AGG | + | chr5_1:24843537-24843556 | Msa0725250:intron | 30.0% | |
| TGAACTTTCCATTATCATTG+TGG | + | chr5_1:24843584-24843603 | Msa0725250:intron | 30.0% | |
| ACAAAATGGATGGATATGAA+TGG | - | chr5_1:24843705-24843724 | None:intergenic | 30.0% | |
| !!! | AGCAGTCATTTTTTAAACGA+GGG | - | chr5_1:24843749-24843768 | None:intergenic | 30.0% |
| !!! | AAGCAGTCATTTTTTAAACG+AGG | - | chr5_1:24843750-24843769 | None:intergenic | 30.0% |
| ACTTATGATTACCAATTTGG+TGG | + | chr5_1:24843780-24843799 | Msa0725250:intron | 30.0% | |
| TACATGAAATTCCACCAAAT+TGG | - | chr5_1:24843794-24843813 | None:intergenic | 30.0% | |
| TTCATTGTGATCTATAGTTG+GGG | + | chr5_1:24843832-24843851 | Msa0725250:intron | 30.0% | |
| ! | ATTGATATGCTTGATTTTGC+AGG | + | chr5_1:24844043-24844062 | Msa0725250:intron | 30.0% |
| ! | TTGATATGCTTGATTTTGCA+GGG | + | chr5_1:24844044-24844063 | Msa0725250:intron | 30.0% |
| GAAAGAAATCTCTAATTTCG+AGG | + | chr5_1:24844149-24844168 | Msa0725250:exon | 30.0% | |
| ! | GTCCAATCTGTATTTTTCAT+TGG | + | chr5_1:24844282-24844301 | Msa0725250:intron | 30.0% |
| TTGTAAATACATATGTTGGG+AGG | + | chr5_1:24844313-24844332 | Msa0725250:intron | 30.0% | |
| AATTGGAACAATATGCAGAA+TGG | + | chr5_1:24844486-24844505 | Msa0725250:three_prime_UTR | 30.0% | |
| ! | GAGCAAAATGGAATGTTTTC+TGG | + | chr5_1:24837022-24837041 | Msa0725250:CDS | 35.0% |
| TAAGATTTGGAAGCAGAGAA+TGG | + | chr5_1:24837182-24837201 | Msa0725250:intron | 35.0% | |
| ! | AGAGGAACGATTTTCAAAAC+GGG | + | chr5_1:24837224-24837243 | Msa0725250:CDS | 35.0% |
| GGCTATCAAATTCATGCAAA+AGG | - | chr5_1:24837281-24837300 | None:intergenic | 35.0% | |
| ! | TAGAGCAATTCTGTTTTCTG+TGG | + | chr5_1:24837414-24837433 | Msa0725250:intron | 35.0% |
| CAGTACTCACTACACATTTA+GGG | - | chr5_1:24837534-24837553 | None:intergenic | 35.0% | |
| ACAGTACTCACTACACATTT+AGG | - | chr5_1:24837535-24837554 | None:intergenic | 35.0% | |
| TCACGTAGAAGAGGTTAAAT+AGG | - | chr5_1:24837568-24837587 | None:intergenic | 35.0% | |
| CATCAGATTATGGGATAAGT+GGG | - | chr5_1:24837675-24837694 | None:intergenic | 35.0% | |
| CTGTTATGTGCATCAGATTA+TGG | - | chr5_1:24837685-24837704 | None:intergenic | 35.0% | |
| AACACGTTTAAACCTGTAAG+CGG | - | chr5_1:24837908-24837927 | None:intergenic | 35.0% | |
| GCAATTTGCAGATTGAACAA+CGG | - | chr5_1:24837985-24838004 | None:intergenic | 35.0% | |
| AATCGAGTTTGAGTGAGTTA+AGG | - | chr5_1:24838358-24838377 | None:intergenic | 35.0% | |
| AACGTATTCACTCTGTTTCA+TGG | - | chr5_1:24838418-24838437 | None:intergenic | 35.0% | |
| ATAGGCAAGGCTCTATAAAA+GGG | - | chr5_1:24838442-24838461 | None:intergenic | 35.0% | |
| ! | GTTGTGGATTGCAATTCATA+GGG | - | chr5_1:24838569-24838588 | None:intergenic | 35.0% |
| ! | TGTTGTGGATTGCAATTCAT+AGG | - | chr5_1:24838570-24838589 | None:intergenic | 35.0% |
| GAGTCAAAAATGAGTTGTTG+TGG | - | chr5_1:24838585-24838604 | None:intergenic | 35.0% | |
| !! | GACTGACTTGACAATACTAA+TGG | - | chr5_1:24838734-24838753 | None:intergenic | 35.0% |
| GACAGTAGATAAGTATACTG+AGG | - | chr5_1:24838757-24838776 | None:intergenic | 35.0% | |
| AGAGTTAGTGTCAACATTGA+AGG | + | chr5_1:24838829-24838848 | Msa0725250:intron | 35.0% | |
| !!! | TATGGGTCTTTTTTGTTGGT+TGG | - | chr5_1:24839007-24839026 | None:intergenic | 35.0% |
| ! | CCAAGAAATACATTTGGAAC+AGG | - | chr5_1:24839108-24839127 | None:intergenic | 35.0% |
| CCTGTTCCAAATGTATTTCT+TGG | + | chr5_1:24839105-24839124 | Msa0725250:intron | 35.0% | |
| TAATCCGAATTGTTGAGTGT+TGG | + | chr5_1:24839218-24839237 | Msa0725250:intron | 35.0% | |
| AATCCGAATTGTTGAGTGTT+GGG | + | chr5_1:24839219-24839238 | Msa0725250:intron | 35.0% | |
| ATGTGTAATGTTTGCCCATT+GGG | - | chr5_1:24839256-24839275 | None:intergenic | 35.0% | |
| AATGTGTAATGTTTGCCCAT+TGG | - | chr5_1:24839257-24839276 | None:intergenic | 35.0% | |
| TGGAAGACAGCTTAAAATCA+GGG | + | chr5_1:24839332-24839351 | Msa0725250:CDS | 35.0% | |
| CAATGAACTTGACACATCTT+TGG | + | chr5_1:24839411-24839430 | Msa0725250:CDS | 35.0% | |
| GAAGATCAAATCATCTTCTG+AGG | + | chr5_1:24839489-24839508 | Msa0725250:CDS | 35.0% | |
| ACCACTTTCATCAACAAACA+CGG | + | chr5_1:24839561-24839580 | Msa0725250:CDS | 35.0% | |
| !!! | TTTTCAGAATCAAGGTGTTG+CGG | - | chr5_1:24839634-24839653 | None:intergenic | 35.0% |
| ! | ACACCTTGATTCTGAAAATG+CGG | + | chr5_1:24839636-24839655 | Msa0725250:CDS | 35.0% |
| !! | TTTTCTTGTTTAGGTCAGGT+GGG | - | chr5_1:24839956-24839975 | None:intergenic | 35.0% |
| !! | ATTTTCTTGTTTAGGTCAGG+TGG | - | chr5_1:24839957-24839976 | None:intergenic | 35.0% |
| !! | AACAAGAGCATTAGAATAGC+CGG | - | chr5_1:24840068-24840087 | None:intergenic | 35.0% |
| TGTAATAGCTAAAGGATCTC+CGG | - | chr5_1:24840137-24840156 | None:intergenic | 35.0% | |
| GAGATCCTTTAGCTATTACA+AGG | + | chr5_1:24840137-24840156 | Msa0725250:CDS | 35.0% | |
| !!! | TTGAAGGGAGGTTTTTTATC+TGG | - | chr5_1:24840209-24840228 | None:intergenic | 35.0% |
| ! | TTGATTTTCCAATTGAAGGG+AGG | - | chr5_1:24840221-24840240 | None:intergenic | 35.0% |
| CCCTTCAATTGGAAAATCAA+TGG | + | chr5_1:24840221-24840240 | Msa0725250:CDS | 35.0% | |
| ATCTCCTGTTAGATCTTCAA+CGG | + | chr5_1:24840351-24840370 | Msa0725250:intron | 35.0% | |
| TATCAGACAACAAGGATCAT+AGG | - | chr5_1:24840421-24840440 | None:intergenic | 35.0% | |
| ! | ATGATCCTTGTTGTCTGATA+CGG | + | chr5_1:24840421-24840440 | Msa0725250:intron | 35.0% |
| AAAATCCGTATCAGACAACA+AGG | - | chr5_1:24840429-24840448 | None:intergenic | 35.0% | |
| ! | TAGGCACAAATGTCTTATTG+AGG | - | chr5_1:24840637-24840656 | None:intergenic | 35.0% |
| ATTCAGGAGATAATCACTAC+TGG | + | chr5_1:24840720-24840739 | Msa0725250:CDS | 35.0% | |
| TTCAGGAGATAATCACTACT+GGG | + | chr5_1:24840721-24840740 | Msa0725250:CDS | 35.0% | |
| TACTGGGAAGTTATCGAAAT+TGG | + | chr5_1:24840737-24840756 | Msa0725250:CDS | 35.0% | |
| !! | ACACTTTGAAACCGATGAAA+AGG | + | chr5_1:24840761-24840780 | Msa0725250:CDS | 35.0% |
| ! | TCCTTATTTGGAGAAGTATG+GGG | + | chr5_1:24841011-24841030 | Msa0725250:CDS | 35.0% |
| GCACTGAAATTGTATGAGAA+AGG | + | chr5_1:24841050-24841069 | Msa0725250:CDS | 35.0% | |
| CTTACAAATGCACAGAAGTT+AGG | + | chr5_1:24841110-24841129 | Msa0725250:CDS | 35.0% | |
| ! | ACTTTGATGATATCAGGCAT+CGG | + | chr5_1:24841141-24841160 | Msa0725250:CDS | 35.0% |
| ! | ACAGATTTTGCAGAAAGTTG+GGG | + | chr5_1:24841289-24841308 | Msa0725250:CDS | 35.0% |
| TGATTTCAAAACAAGACAGG+CGG | - | chr5_1:24841506-24841525 | None:intergenic | 35.0% | |
| !!! | GACAGTGGATTTTAGAATCT+AGG | - | chr5_1:24841579-24841598 | None:intergenic | 35.0% |
| AACTGAAATACATGAGACAG+TGG | - | chr5_1:24841594-24841613 | None:intergenic | 35.0% | |
| GAATTAGTAGCAGAGTAACT+CGG | - | chr5_1:24841722-24841741 | None:intergenic | 35.0% | |
| TAGGTTACGATTATTTGTGG+AGG | + | chr5_1:24841745-24841764 | Msa0725250:intron | 35.0% | |
| AATTTGAACTCCGTCTCTTA+AGG | + | chr5_1:24842042-24842061 | Msa0725250:intron | 35.0% | |
| TAAGAATTCTGTGTTCCCAA+GGG | - | chr5_1:24842133-24842152 | None:intergenic | 35.0% | |
| TTAAGAATTCTGTGTTCCCA+AGG | - | chr5_1:24842134-24842153 | None:intergenic | 35.0% | |
| ! | TCCCTTTTCATCTCCATTAT+TGG | + | chr5_1:24842281-24842300 | Msa0725250:intron | 35.0% |
| TTCCTAACAGCAAGAGTAAA+GGG | - | chr5_1:24842335-24842354 | None:intergenic | 35.0% | |
| TTTCCTAACAGCAAGAGTAA+AGG | - | chr5_1:24842336-24842355 | None:intergenic | 35.0% | |
| ! | AAATGAGAAGTGCAGAATGA+TGG | - | chr5_1:24842372-24842391 | None:intergenic | 35.0% |
| TAAAGGATATGAGTTTCCTG+AGG | + | chr5_1:24842478-24842497 | Msa0725250:CDS | 35.0% | |
| AAAGGATATGAGTTTCCTGA+GGG | + | chr5_1:24842479-24842498 | Msa0725250:CDS | 35.0% | |
| TTTCAGTAATCACAGTGAAG+AGG | + | chr5_1:24842512-24842531 | Msa0725250:CDS | 35.0% | |
| TGTTATCAGGAAAGCTTAGT+TGG | - | chr5_1:24842590-24842609 | None:intergenic | 35.0% | |
| CTCCTTATAGAATAGGATGA+TGG | - | chr5_1:24842748-24842767 | None:intergenic | 35.0% | |
| ! | TTTTTCCGTGTAAGTCAATC+TGG | + | chr5_1:24842898-24842917 | Msa0725250:intron | 35.0% |
| TCATTGTATGCAAGTCAATC+TGG | + | chr5_1:24842943-24842962 | Msa0725250:intron | 35.0% | |
| !! | TCTGGTGTTGATACATACTT+TGG | + | chr5_1:24843011-24843030 | Msa0725250:CDS | 35.0% |
| !!! | TTTGGTTTTTGTACCTATCC+TGG | + | chr5_1:24843029-24843048 | Msa0725250:CDS | 35.0% |
| !! | ACGGCATCGTATTGATTTAA+AGG | + | chr5_1:24843061-24843080 | Msa0725250:CDS | 35.0% |
| CTTCGTAGAATGTGTAATGA+TGG | + | chr5_1:24843135-24843154 | Msa0725250:intron | 35.0% | |
| AATGTGTAATGATGGCTGAT+TGG | + | chr5_1:24843143-24843162 | Msa0725250:intron | 35.0% | |
| TTCTGTGATCATTCATACCT+TGG | + | chr5_1:24843276-24843295 | Msa0725250:intron | 35.0% | |
| TGTGCATAGCTTAAGAACTA+TGG | - | chr5_1:24843435-24843454 | None:intergenic | 35.0% | |
| ! | CAACTCAGAAGTGTATATGA+TGG | + | chr5_1:24843453-24843472 | Msa0725250:intron | 35.0% |
| ! | CCAAAAGCATATATGTCTCT+TGG | - | chr5_1:24843503-24843522 | None:intergenic | 35.0% |
| ! | CCAAGAGACATATATGCTTT+TGG | + | chr5_1:24843500-24843519 | Msa0725250:CDS | 35.0% |
| CATTATCATTGTGGCTGAAA+CGG | + | chr5_1:24843593-24843612 | Msa0725250:intron | 35.0% | |
| !!! | ATTTTTTAAACGAGGGGAAG+AGG | - | chr5_1:24843742-24843761 | None:intergenic | 35.0% |
| !!! | GCAGTCATTTTTTAAACGAG+GGG | - | chr5_1:24843748-24843767 | None:intergenic | 35.0% |
| !!! | TATGTTGCTTTTTCTCTTCC+TGG | + | chr5_1:24843858-24843877 | Msa0725250:intron | 35.0% |
| !!! | ATGTTGCTTTTTCTCTTCCT+GGG | + | chr5_1:24843859-24843878 | Msa0725250:intron | 35.0% |
| ACAATCCTGTATCATCAAGA+CGG | - | chr5_1:24843928-24843947 | None:intergenic | 35.0% | |
| TGATGATACAGGATTGTTTC+CGG | + | chr5_1:24843931-24843950 | Msa0725250:CDS | 35.0% | |
| GAAGTTGTATACTGAAAAGG+AGG | + | chr5_1:24844088-24844107 | Msa0725250:CDS | 35.0% | |
| !! | AAAGGAGGTGTTTGAATTCT+TGG | + | chr5_1:24844103-24844122 | Msa0725250:CDS | 35.0% |
| !! | AAGGAGGTGTTTGAATTCTT+GGG | + | chr5_1:24844104-24844123 | Msa0725250:CDS | 35.0% |
| ACATACAATAGCCTACAATG+CGG | - | chr5_1:24844239-24844258 | None:intergenic | 35.0% | |
| GCCCAATGAAAAATACAGAT+TGG | - | chr5_1:24844287-24844306 | None:intergenic | 35.0% | |
| AGGATACAGGTTTACAAATC+TGG | + | chr5_1:24844333-24844352 | Msa0725250:intron | 35.0% | |
| GTTGTCTACTTTGTCTCCAA+AGG | + | chr5_1:24837049-24837068 | Msa0725250:CDS | 40.0% | |
| AGTTCAAGCACGTAGATTAC+AGG | + | chr5_1:24837072-24837091 | Msa0725250:CDS | 40.0% | |
| ! | TTGATAGCCAACGTTTGTCA+CGG | + | chr5_1:24837292-24837311 | Msa0725250:CDS | 40.0% |
| AACGTTTGTCACGGTTCAAA+GGG | + | chr5_1:24837301-24837320 | Msa0725250:CDS | 40.0% | |
| ! | CTGTTTTCTGTGGTTGAGTT+AGG | + | chr5_1:24837424-24837443 | Msa0725250:intron | 40.0% |
| AATAAATTGGGTCAGGCAGA+AGG | + | chr5_1:24837469-24837488 | Msa0725250:intron | 40.0% | |
| ATAAATTGGGTCAGGCAGAA+GGG | + | chr5_1:24837470-24837489 | Msa0725250:intron | 40.0% | |
| GGTAAGGCTACTAAAACGAA+TGG | + | chr5_1:24837491-24837510 | Msa0725250:intron | 40.0% | |
| ! | AAAATTGGCTCACGTAGAAG+AGG | - | chr5_1:24837577-24837596 | None:intergenic | 40.0% |
| GAGTGAAAAATGAGTTACCG+TGG | + | chr5_1:24837598-24837617 | Msa0725250:intron | 40.0% | |
| ! | TACCGTGGATTGCTATTCTT+AGG | + | chr5_1:24837613-24837632 | Msa0725250:intron | 40.0% |
| ! | ACCGTGGATTGCTATTCTTA+GGG | + | chr5_1:24837614-24837633 | Msa0725250:intron | 40.0% |
| TCCCTAAGAATAGCAATCCA+CGG | - | chr5_1:24837618-24837637 | None:intergenic | 40.0% | |
| GCATCAGATTATGGGATAAG+TGG | - | chr5_1:24837676-24837695 | None:intergenic | 40.0% | |
| ATCACAAAGTCTGGAAACGT+GGG | - | chr5_1:24837721-24837740 | None:intergenic | 40.0% | |
| ACGTTTCCAGACTTTGTGAT+GGG | + | chr5_1:24837721-24837740 | Msa0725250:intron | 40.0% | |
| !! | CTTAATTTGCTTCCGCTTAC+AGG | + | chr5_1:24837893-24837912 | Msa0725250:intron | 40.0% |
| !! | CTTAATTTGCTTTCGCTTCC+TGG | - | chr5_1:24838256-24838275 | None:intergenic | 40.0% |
| GATAGGCAAGGCTCTATAAA+AGG | - | chr5_1:24838443-24838462 | None:intergenic | 40.0% | |
| ! | ACATTTCTGGACTTCGTGAT+AGG | - | chr5_1:24838460-24838479 | None:intergenic | 40.0% |
| TATCACGAAGTCCAGAAATG+TGG | + | chr5_1:24838459-24838478 | Msa0725250:intron | 40.0% | |
| ATCACGAAGTCCAGAAATGT+GGG | + | chr5_1:24838460-24838479 | Msa0725250:intron | 40.0% | |
| TAAAGATGAGCCCACATTTC+TGG | - | chr5_1:24838473-24838492 | None:intergenic | 40.0% | |
| TCAGATTGTGGGAAAATGAG+TGG | + | chr5_1:24838522-24838541 | Msa0725250:intron | 40.0% | |
| ! | ACTCAAAAAATTGGCTCACG+TGG | + | chr5_1:24838601-24838620 | Msa0725250:intron | 40.0% |
| !!! | GAAGGACTGTTTTAACGTCA+AGG | + | chr5_1:24838847-24838866 | Msa0725250:intron | 40.0% |
| GACTACTCGTTACACATTCA+AGG | + | chr5_1:24838939-24838958 | Msa0725250:intron | 40.0% | |
| ! | GTAGGGGGTGATATTCATTT+TGG | - | chr5_1:24838966-24838985 | None:intergenic | 40.0% |
| AAAAGTGAGGGTTGTAGTAG+GGG | - | chr5_1:24838982-24839001 | None:intergenic | 40.0% | |
| CAAAAGTGAGGGTTGTAGTA+GGG | - | chr5_1:24838983-24839002 | None:intergenic | 40.0% | |
| ! | ATCCGAATTGTTGAGTGTTG+GGG | + | chr5_1:24839220-24839239 | Msa0725250:intron | 40.0% |
| AGTCACTTCTCCTTTATCAG+TGG | + | chr5_1:24839308-24839327 | Msa0725250:intron | 40.0% | |
| CTGGAAGACAGCTTAAAATC+AGG | + | chr5_1:24839331-24839350 | Msa0725250:CDS | 40.0% | |
| GGAAGACAGCTTAAAATCAG+GGG | + | chr5_1:24839333-24839352 | Msa0725250:CDS | 40.0% | |
| GGATCTGTATGTACTGAAGT+TGG | + | chr5_1:24839369-24839388 | Msa0725250:CDS | 40.0% | |
| TCATTGATACCTTCACCTTG+AGG | - | chr5_1:24839397-24839416 | None:intergenic | 40.0% | |
| CTAGAAAGGCTACCATCAAT+TGG | - | chr5_1:24839445-24839464 | None:intergenic | 40.0% | |
| CAGTTAAGACTGCACTCATA+CGG | - | chr5_1:24839763-24839782 | None:intergenic | 40.0% | |
| CATATAACTCCAACAGCTTG+CGG | + | chr5_1:24840025-24840044 | Msa0725250:intron | 40.0% | |
| ATATAACTCCAACAGCTTGC+GGG | + | chr5_1:24840026-24840045 | Msa0725250:intron | 40.0% | |
| ! | ATGTTTGATAGCATTGGGTG+AGG | + | chr5_1:24840110-24840129 | Msa0725250:intron | 40.0% |
| TTAGCCGTTGAAGATCTAAC+AGG | - | chr5_1:24840358-24840377 | None:intergenic | 40.0% | |
| ACCCCATACTTCTCCAAATA+AGG | - | chr5_1:24841015-24841034 | None:intergenic | 40.0% | |
| ! | TTTGGAGAAGTATGGGGTAT+AGG | + | chr5_1:24841017-24841036 | Msa0725250:CDS | 40.0% |
| CTCATACAATTTCAGTGCTG+TGG | - | chr5_1:24841048-24841067 | None:intergenic | 40.0% | |
| ! | TTGGGGAGAATATTTTGCCT+GGG | + | chr5_1:24841306-24841325 | Msa0725250:CDS | 40.0% |
| ! | AATTTTGTAGTACTCACCCC+AGG | - | chr5_1:24841326-24841345 | None:intergenic | 40.0% |
| GGGGTGAGTACTACAAAATT+TGG | + | chr5_1:24841326-24841345 | Msa0725250:intron | 40.0% | |
| TCAATGGCATGCTTCATTTC+TGG | - | chr5_1:24841696-24841715 | None:intergenic | 40.0% | |
| CAGAGTAACTCGGTTATCAA+TGG | - | chr5_1:24841712-24841731 | None:intergenic | 40.0% | |
| TAACACATCCAGATGGAACA+AGG | + | chr5_1:24841815-24841834 | Msa0725250:CDS | 40.0% | |
| TGTGTTCCCAAGGGAAATTT+CGG | - | chr5_1:24842124-24842143 | None:intergenic | 40.0% | |
| GTAAAGGGATAGTCATTGCA+TGG | - | chr5_1:24842320-24842339 | None:intergenic | 40.0% | |
| !! | ATCCCTTTACTCTTGCTGTT+AGG | + | chr5_1:24842330-24842349 | Msa0725250:intron | 40.0% |
| TGAAAATCAAATCCTCCCTC+AGG | - | chr5_1:24842497-24842516 | None:intergenic | 40.0% | |
| TGGTTTATGTCAGACTCTCA+TGG | - | chr5_1:24842728-24842747 | None:intergenic | 40.0% | |
| ! | ATCCACCAGATTGACTTACA+CGG | - | chr5_1:24842906-24842925 | None:intergenic | 40.0% |
| TTGTATGCAAGTCAATCTGG+TGG | + | chr5_1:24842946-24842965 | Msa0725250:intron | 40.0% | |
| TAACCTTTCCTTGTTGCACA+GGG | + | chr5_1:24842981-24843000 | Msa0725250:intron | 40.0% | |
| ! | GTTTTTGTACCTATCCTGGA+CGG | + | chr5_1:24843033-24843052 | Msa0725250:CDS | 40.0% |
| ! | TTTTTGTACCTATCCTGGAC+GGG | + | chr5_1:24843034-24843053 | Msa0725250:CDS | 40.0% |
| ! | ATGCTTTTGGACTTGTAGCT+TGG | + | chr5_1:24843513-24843532 | Msa0725250:CDS | 40.0% |
| CGTTTCAGCCACAATGATAA+TGG | - | chr5_1:24843595-24843614 | None:intergenic | 40.0% | |
| CAAATGTAGGGGTGACAAAA+TGG | - | chr5_1:24843719-24843738 | None:intergenic | 40.0% | |
| AGACAGCAAGCAGAATCTAA+AGG | + | chr5_1:24843899-24843918 | Msa0725250:intron | 40.0% | |
| ! | TTGATTTTGCAGGGCACAAA+AGG | + | chr5_1:24844053-24844072 | Msa0725250:intron | 40.0% |
| ACAATACCCTCTTGTGATGT+TGG | + | chr5_1:24844173-24844192 | Msa0725250:intron | 40.0% | |
| !! | TTTTGTTATGCCCGCATTGT+AGG | + | chr5_1:24844225-24844244 | Msa0725250:intron | 40.0% |
| CATACAATAGCCTACAATGC+GGG | - | chr5_1:24844238-24844257 | None:intergenic | 40.0% | |
| CTATTGTATGTCGAGCCAAA+AGG | + | chr5_1:24844248-24844267 | Msa0725250:intron | 40.0% | |
| TACATATGTTGGGAGGATAC+AGG | + | chr5_1:24844320-24844339 | Msa0725250:intron | 40.0% | |
| TCTACGTGCTTGAACTCCTT+TGG | - | chr5_1:24837068-24837087 | None:intergenic | 45.0% | |
| AAGCAGAGAATGGTGCAGAT+GGG | + | chr5_1:24837192-24837211 | Msa0725250:CDS | 45.0% | |
| CTTTGAACCGTGACAAACGT+TGG | - | chr5_1:24837302-24837321 | None:intergenic | 45.0% | |
| CAACGTTTGTCACGGTTCAA+AGG | + | chr5_1:24837300-24837319 | Msa0725250:CDS | 45.0% | |
| ACGTTTGTCACGGTTCAAAG+GGG | + | chr5_1:24837302-24837321 | Msa0725250:CDS | 45.0% | |
| GGGATAAGTGGGAAAATGAG+TGG | - | chr5_1:24837664-24837683 | None:intergenic | 45.0% | |
| CATCACAAAGTCTGGAAACG+TGG | - | chr5_1:24837722-24837741 | None:intergenic | 45.0% | |
| CACGTTTCCAGACTTTGTGA+TGG | + | chr5_1:24837720-24837739 | Msa0725250:intron | 45.0% | |
| GATGGGCAATGCTCTACAAA+AGG | + | chr5_1:24837738-24837757 | Msa0725250:intron | 45.0% | |
| CCTAACTCACTCAAACTCGA+TGG | - | chr5_1:24837814-24837833 | None:intergenic | 45.0% | |
| CCATCGAGTTTGAGTGAGTT+AGG | + | chr5_1:24837811-24837830 | Msa0725250:intron | 45.0% | |
| GCTCTTTGCTCACATAGCAA+TGG | + | chr5_1:24837855-24837874 | Msa0725250:intron | 45.0% | |
| TTTGCTCACATAGCAATGGC+TGG | + | chr5_1:24837859-24837878 | Msa0725250:intron | 45.0% | |
| GCTCTTTCCTCACATAGCAA+TGG | - | chr5_1:24838294-24838313 | None:intergenic | 45.0% | |
| ! | TAGGAGTGTGCATCAGATTG+TGG | + | chr5_1:24838510-24838529 | Msa0725250:intron | 45.0% |
| ! | AGGAGTGTGCATCAGATTGT+GGG | + | chr5_1:24838511-24838530 | Msa0725250:intron | 45.0% |
| ! | AAAATTGGCTCACGTGGAAG+AGG | + | chr5_1:24838607-24838626 | Msa0725250:intron | 45.0% |
| AAAGTGAGGGTTGTAGTAGG+GGG | - | chr5_1:24838981-24839000 | None:intergenic | 45.0% | |
| CCAAAAGTGAGGGTTGTAGT+AGG | - | chr5_1:24838984-24839003 | None:intergenic | 45.0% | |
| ! | CCTACTACAACCCTCACTTT+TGG | + | chr5_1:24838981-24839000 | Msa0725250:intron | 45.0% |
| ! | TGTTGGTTGGCCAAAAGTGA+GGG | - | chr5_1:24838994-24839013 | None:intergenic | 45.0% |
| ! | TTGTTGGTTGGCCAAAAGTG+AGG | - | chr5_1:24838995-24839014 | None:intergenic | 45.0% |
| !! | GGAACAGGCTCTGAATTACA+AGG | - | chr5_1:24839093-24839112 | None:intergenic | 45.0% |
| CTCCCCAACACTCAACAATT+CGG | - | chr5_1:24839225-24839244 | None:intergenic | 45.0% | |
| !! | TTGTTGAGTGTTGGGGAGTT+CGG | + | chr5_1:24839227-24839246 | Msa0725250:intron | 45.0% |
| ACTTCTCCTTTATCAGTGGC+TGG | + | chr5_1:24839312-24839331 | Msa0725250:CDS | 45.0% | |
| TGTCTTCCAGCCACTGATAA+AGG | - | chr5_1:24839321-24839340 | None:intergenic | 45.0% | |
| ATCAGGGGAGAAACTATCAG+AGG | + | chr5_1:24839348-24839367 | Msa0725250:CDS | 45.0% | |
| GTACTGAAGTTGGATCCTCA+AGG | + | chr5_1:24839379-24839398 | Msa0725250:CDS | 45.0% | |
| AAGTTGGATCCTCAAGGTGA+AGG | + | chr5_1:24839385-24839404 | Msa0725250:CDS | 45.0% | |
| ACTGCTGAGGTTCACTAGAA+AGG | - | chr5_1:24839459-24839478 | None:intergenic | 45.0% | |
| ! | GCCGTGTTTGTTGATGAAAG+TGG | - | chr5_1:24839565-24839584 | None:intergenic | 45.0% |
| ! | CTGCCGCATTTTCAGAATCA+AGG | - | chr5_1:24839642-24839661 | None:intergenic | 45.0% |
| TATAACTCCAACAGCTTGCG+GGG | + | chr5_1:24840027-24840046 | Msa0725250:intron | 45.0% | |
| AAAAAAACCCCGCAAGCTGT+TGG | - | chr5_1:24840037-24840056 | None:intergenic | 45.0% | |
| TACAATTTCAGTGCTGTGGC+TGG | - | chr5_1:24841044-24841063 | None:intergenic | 45.0% | |
| ! | GTTGGGGAGAATATTTTGCC+TGG | + | chr5_1:24841305-24841324 | Msa0725250:CDS | 45.0% |
| ! | TGGGGAGAATATTTTGCCTG+GGG | + | chr5_1:24841307-24841326 | Msa0725250:CDS | 45.0% |
| !! | CATGCTTCATTTCTGGCTGA+AGG | - | chr5_1:24841689-24841708 | None:intergenic | 45.0% |
| TGTGGAGGATCATATAGACG+TGG | + | chr5_1:24841760-24841779 | Msa0725250:CDS | 45.0% | |
| AATGATATCAATGTCCCCGC+AGG | - | chr5_1:24841794-24841813 | None:intergenic | 45.0% | |
| AAGCAGTACCTTGTTCCATC+TGG | - | chr5_1:24841826-24841845 | None:intergenic | 45.0% | |
| AGTTCAAATTCGCTCGAGGA+CGG | - | chr5_1:24842032-24842051 | None:intergenic | 45.0% | |
| ATGCAGCCGAAATTTCCCTT+GGG | + | chr5_1:24842115-24842134 | Msa0725250:intron | 45.0% | |
| TTCCGTGTAAGTCAATCTGG+TGG | + | chr5_1:24842901-24842920 | Msa0725250:intron | 45.0% | |
| GTAACCTTTCCTTGTTGCAC+AGG | + | chr5_1:24842980-24842999 | Msa0725250:intron | 45.0% | |
| TTTGGACTTGTAGCTTGGAC+CGG | + | chr5_1:24843518-24843537 | Msa0725250:CDS | 45.0% | |
| TCATTGTGGCTGAAACGGAT+TGG | + | chr5_1:24843598-24843617 | Msa0725250:intron | 45.0% | |
| TGTAGGGGTGACAAAATGGA+TGG | - | chr5_1:24843715-24843734 | None:intergenic | 45.0% | |
| ! | GGATTCCGTCTTGATGATAC+AGG | + | chr5_1:24843920-24843939 | Msa0725250:CDS | 45.0% |
| AGGATTGTTTCCGGCTATTC+AGG | + | chr5_1:24843940-24843959 | Msa0725250:CDS | 45.0% | |
| GGATTGTTTCCGGCTATTCA+GGG | + | chr5_1:24843941-24843960 | Msa0725250:CDS | 45.0% | |
| TTGAATTCTTGGGCTTTCCC+TGG | + | chr5_1:24844114-24844133 | Msa0725250:CDS | 45.0% | |
| CTTTCATGTGGTTCAAGCCA+GGG | - | chr5_1:24844134-24844153 | None:intergenic | 45.0% | |
| TCTTTCATGTGGTTCAAGCC+AGG | - | chr5_1:24844135-24844154 | None:intergenic | 45.0% | |
| ACCCTCTTGTGATGTTGGAA+AGG | + | chr5_1:24844178-24844197 | Msa0725250:intron | 45.0% | |
| CCCTTTCCAACATCACAAGA+GGG | - | chr5_1:24844182-24844201 | None:intergenic | 45.0% | |
| CCCTCTTGTGATGTTGGAAA+GGG | + | chr5_1:24844179-24844198 | Msa0725250:intron | 45.0% | |
| CCTCTTGTGATGTTGGAAAG+GGG | + | chr5_1:24844180-24844199 | Msa0725250:intron | 45.0% | |
| !!! | TTTTTTTATAAATAATTTAG+TGG | + | chr5_1:24843627-24843646 | Msa0725250:intron | 5.0% |
| GAAGCAGAGAATGGTGCAGA+TGG | + | chr5_1:24837191-24837210 | Msa0725250:CDS | 50.0% | |
| GCATTGCCCATCACAAAGTC+TGG | - | chr5_1:24837730-24837749 | None:intergenic | 50.0% | |
| CCTCACATAGCAATGGCTAG+AGG | - | chr5_1:24838287-24838306 | None:intergenic | 50.0% | |
| CCTCTAGCCATTGCTATGTG+AGG | + | chr5_1:24838284-24838303 | Msa0725250:intron | 50.0% | |
| TCTGGACTTCGTGATAGGCA+AGG | - | chr5_1:24838455-24838474 | None:intergenic | 50.0% | |
| !! | TGTTGAGTGTTGGGGAGTTC+GGG | + | chr5_1:24839228-24839247 | Msa0725250:intron | 50.0% |
| TTGGATCCTGCGCCAATTGA+TGG | + | chr5_1:24839430-24839449 | Msa0725250:CDS | 50.0% | |
| ACAAACACGGCAAGCAGTCA+TGG | + | chr5_1:24839574-24839593 | Msa0725250:CDS | 50.0% | |
| TTTAGGTCAGGTGGGCAGTA+CGG | - | chr5_1:24839948-24839967 | None:intergenic | 50.0% | |
| ! | TGATAGCATTGGGTGAGGAC+CGG | + | chr5_1:24840115-24840134 | Msa0725250:intron | 50.0% |
| ! | GACAGGCGGAAGTTTGAGAT+TGG | - | chr5_1:24841492-24841511 | None:intergenic | 50.0% |
| AGACGTGGAAAAGCTACCTG+CGG | + | chr5_1:24841775-24841794 | Msa0725250:CDS | 50.0% | |
| GTTCAAATTCGCTCGAGGAC+GGG | - | chr5_1:24842031-24842050 | None:intergenic | 50.0% | |
| ACGGAGTTCAAATTCGCTCG+AGG | - | chr5_1:24842036-24842055 | None:intergenic | 50.0% | |
| CAAGGGAAATTTCGGCTGCA+TGG | - | chr5_1:24842116-24842135 | None:intergenic | 50.0% | |
| CATGCAGCCGAAATTTCCCT+TGG | + | chr5_1:24842114-24842133 | Msa0725250:intron | 50.0% | |
| GGATATGAGTTTCCTGAGGG+AGG | + | chr5_1:24842482-24842501 | Msa0725250:CDS | 50.0% | |
| AATCAGTGCCCTGTGCAACA+AGG | - | chr5_1:24842992-24843011 | None:intergenic | 50.0% | |
| !! | GTGGCTGAAACGGATTGGAT+TGG | + | chr5_1:24843603-24843622 | Msa0725250:intron | 50.0% |
| AGGGGAAGAGGCAAATGTAG+GGG | - | chr5_1:24843730-24843749 | None:intergenic | 50.0% | |
| GAGGGGAAGAGGCAAATGTA+GGG | - | chr5_1:24843731-24843750 | None:intergenic | 50.0% | |
| CTTCCTGGGTGTTTGAATGC+AGG | + | chr5_1:24843873-24843892 | Msa0725250:intron | 50.0% | |
| CAACCTGCATTCAAACACCC+AGG | - | chr5_1:24843879-24843898 | None:intergenic | 50.0% | |
| TTTCCGGCTATTCAGGGTTC+TGG | + | chr5_1:24843947-24843966 | Msa0725250:CDS | 50.0% | |
| ! | TTCAGGGTTCTGGTGGCAAA+CGG | + | chr5_1:24843957-24843976 | Msa0725250:CDS | 50.0% |
| CCCCTTTCCAACATCACAAG+AGG | - | chr5_1:24844183-24844202 | None:intergenic | 50.0% | |
| GAGCCAAAAGGCTTTCGTCT+GGG | + | chr5_1:24844260-24844279 | Msa0725250:intron | 50.0% | |
| CAGAGAATGGTGCAGATGGG+TGG | + | chr5_1:24837195-24837214 | Msa0725250:CDS | 55.0% | |
| GCAGATGGGTGGTGTGATAG+AGG | + | chr5_1:24837206-24837225 | Msa0725250:CDS | 55.0% | |
| TTGGGTCAGGCAGAAGGGTA+AGG | + | chr5_1:24837475-24837494 | Msa0725250:intron | 55.0% | |
| GCTCACATAGCAATGGCTGG+AGG | + | chr5_1:24837862-24837881 | Msa0725250:intron | 55.0% | |
| !! | GTTGAGTGTTGGGGAGTTCG+GGG | + | chr5_1:24839229-24839248 | Msa0725250:intron | 55.0% |
| AGGCTACCATCAATTGGCGC+AGG | - | chr5_1:24839439-24839458 | None:intergenic | 55.0% | |
| GTACCACCAGACAGACCTCA+TGG | - | chr5_1:24841175-24841194 | None:intergenic | 55.0% | |
| GACGTGGAAAAGCTACCTGC+GGG | + | chr5_1:24841776-24841795 | Msa0725250:CDS | 55.0% | |
| ACGTGGAAAAGCTACCTGCG+GGG | + | chr5_1:24841777-24841796 | Msa0725250:CDS | 55.0% | |
| GTGCCCTGTGCAACAAGGAA+AGG | - | chr5_1:24842987-24843006 | None:intergenic | 55.0% | |
| !! | GTTGCACAGGGCACTGATTC+TGG | + | chr5_1:24842993-24843012 | Msa0725250:intron | 55.0% |
| CCTATCCTGGACGGGAGTTA+CGG | + | chr5_1:24843042-24843061 | Msa0725250:CDS | 55.0% | |
| CGAGGGGAAGAGGCAAATGT+AGG | - | chr5_1:24843732-24843751 | None:intergenic | 55.0% | |
| CCACCAGAACCCTGAATAGC+CGG | - | chr5_1:24843953-24843972 | None:intergenic | 55.0% | |
| ! | TCAGGGTTCTGGTGGCAAAC+GGG | + | chr5_1:24843958-24843977 | Msa0725250:CDS | 55.0% |
| CGAGCCAAAAGGCTTTCGTC+TGG | + | chr5_1:24844259-24844278 | Msa0725250:intron | 55.0% | |
| ! | GGACCCAGACGAAAGCCTTT+TGG | - | chr5_1:24844266-24844285 | None:intergenic | 55.0% |
| GCATCGGATTCCACGCCATG+AGG | + | chr5_1:24841157-24841176 | Msa0725250:CDS | 60.0% | |
| TCCACGCCATGAGGTCTGTC+TGG | + | chr5_1:24841166-24841185 | Msa0725250:intron | 60.0% | |
| ACCAGACAGACCTCATGGCG+TGG | - | chr5_1:24841170-24841189 | None:intergenic | 60.0% | |
| ACGCCATGAGGTCTGTCTGG+TGG | + | chr5_1:24841169-24841188 | Msa0725250:intron | 60.0% | |
| CCGTAACTCCCGTCCAGGAT+AGG | - | chr5_1:24843045-24843064 | None:intergenic | 60.0% | |
| ! | CCGGCTATTCAGGGTTCTGG+TGG | + | chr5_1:24843950-24843969 | Msa0725250:CDS | 60.0% |
| TGGGGAGTTCGGGGTCCCAA+TGG | + | chr5_1:24839238-24839257 | Msa0725250:intron | 65.0% | |
| GGGGAGTTCGGGGTCCCAAT+GGG | + | chr5_1:24839239-24839258 | Msa0725250:intron | 65.0% | |
| GTCAGGTGGGCAGTACGGCA+AGG | - | chr5_1:24839943-24839962 | None:intergenic | 65.0% | |
| CGATGCCGTAACTCCCGTCC+AGG | - | chr5_1:24843050-24843069 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 24836968 | 24844528 | 24836968 | ID=Msa0725250;Name=Msa0725250 |
| chr5_1 | mRNA | 24836968 | 24844528 | 24836968 | ID=Msa0725250-mRNA-1;Parent=Msa0725250;Name=Msa0725250-mRNA-1;_AED=0.26;_eAED=0.26;_QI=39|0.86|0.75|1|0.8|0.68|16|72|516 |
| chr5_1 | exon | 24836968 | 24837093 | 24836968 | ID=Msa0725250-mRNA-1:exon:9034;Parent=Msa0725250-mRNA-1 |
| chr5_1 | exon | 24837186 | 24837323 | 24837186 | ID=Msa0725250-mRNA-1:exon:9035;Parent=Msa0725250-mRNA-1 |
| chr5_1 | exon | 24839310 | 24839522 | 24839310 | ID=Msa0725250-mRNA-1:exon:9036;Parent=Msa0725250-mRNA-1 |
| chr5_1 | exon | 24839544 | 24839660 | 24839544 | ID=Msa0725250-mRNA-1:exon:9037;Parent=Msa0725250-mRNA-1 |
| chr5_1 | exon | 24839936 | 24840014 | 24839936 | ID=Msa0725250-mRNA-1:exon:9038;Parent=Msa0725250-mRNA-1 |
| chr5_1 | exon | 24840121 | 24840251 | 24840121 | ID=Msa0725250-mRNA-1:exon:9039;Parent=Msa0725250-mRNA-1 |
| chr5_1 | exon | 24840720 | 24840782 | 24840720 | ID=Msa0725250-mRNA-1:exon:9040;Parent=Msa0725250-mRNA-1 |
| chr5_1 | exon | 24840999 | 24841178 | 24840999 | ID=Msa0725250-mRNA-1:exon:9041;Parent=Msa0725250-mRNA-1 |
| chr5_1 | exon | 24841275 | 24841328 | 24841275 | ID=Msa0725250-mRNA-1:exon:9042;Parent=Msa0725250-mRNA-1 |
| chr5_1 | exon | 24841748 | 24841836 | 24841748 | ID=Msa0725250-mRNA-1:exon:9043;Parent=Msa0725250-mRNA-1 |
| chr5_1 | exon | 24842443 | 24842533 | 24842443 | ID=Msa0725250-mRNA-1:exon:9044;Parent=Msa0725250-mRNA-1 |
| chr5_1 | exon | 24843002 | 24843082 | 24843002 | ID=Msa0725250-mRNA-1:exon:9045;Parent=Msa0725250-mRNA-1 |
| chr5_1 | exon | 24843494 | 24843547 | 24843494 | ID=Msa0725250-mRNA-1:exon:9046;Parent=Msa0725250-mRNA-1 |
| chr5_1 | exon | 24843905 | 24843979 | 24843905 | ID=Msa0725250-mRNA-1:exon:9047;Parent=Msa0725250-mRNA-1 |
| chr5_1 | exon | 24844065 | 24844170 | 24844065 | ID=Msa0725250-mRNA-1:exon:9048;Parent=Msa0725250-mRNA-1 |
| chr5_1 | exon | 24844464 | 24844528 | 24844464 | ID=Msa0725250-mRNA-1:exon:9049;Parent=Msa0725250-mRNA-1 |
| chr5_1 | five_prime_UTR | 24836968 | 24837006 | 24836968 | ID=Msa0725250-mRNA-1:five_prime_utr;Parent=Msa0725250-mRNA-1 |
| chr5_1 | CDS | 24837007 | 24837093 | 24837007 | ID=Msa0725250-mRNA-1:cds;Parent=Msa0725250-mRNA-1 |
| chr5_1 | CDS | 24837186 | 24837323 | 24837186 | ID=Msa0725250-mRNA-1:cds;Parent=Msa0725250-mRNA-1 |
| chr5_1 | CDS | 24839310 | 24839522 | 24839310 | ID=Msa0725250-mRNA-1:cds;Parent=Msa0725250-mRNA-1 |
| chr5_1 | CDS | 24839544 | 24839660 | 24839544 | ID=Msa0725250-mRNA-1:cds;Parent=Msa0725250-mRNA-1 |
| chr5_1 | CDS | 24839936 | 24840014 | 24839936 | ID=Msa0725250-mRNA-1:cds;Parent=Msa0725250-mRNA-1 |
| chr5_1 | CDS | 24840121 | 24840251 | 24840121 | ID=Msa0725250-mRNA-1:cds;Parent=Msa0725250-mRNA-1 |
| chr5_1 | CDS | 24840720 | 24840782 | 24840720 | ID=Msa0725250-mRNA-1:cds;Parent=Msa0725250-mRNA-1 |
| chr5_1 | CDS | 24840999 | 24841178 | 24840999 | ID=Msa0725250-mRNA-1:cds;Parent=Msa0725250-mRNA-1 |
| chr5_1 | CDS | 24841275 | 24841328 | 24841275 | ID=Msa0725250-mRNA-1:cds;Parent=Msa0725250-mRNA-1 |
| chr5_1 | CDS | 24841748 | 24841836 | 24841748 | ID=Msa0725250-mRNA-1:cds;Parent=Msa0725250-mRNA-1 |
| chr5_1 | CDS | 24842443 | 24842533 | 24842443 | ID=Msa0725250-mRNA-1:cds;Parent=Msa0725250-mRNA-1 |
| chr5_1 | CDS | 24843002 | 24843082 | 24843002 | ID=Msa0725250-mRNA-1:cds;Parent=Msa0725250-mRNA-1 |
| chr5_1 | CDS | 24843494 | 24843547 | 24843494 | ID=Msa0725250-mRNA-1:cds;Parent=Msa0725250-mRNA-1 |
| chr5_1 | CDS | 24843905 | 24843979 | 24843905 | ID=Msa0725250-mRNA-1:cds;Parent=Msa0725250-mRNA-1 |
| chr5_1 | CDS | 24844065 | 24844163 | 24844065 | ID=Msa0725250-mRNA-1:cds;Parent=Msa0725250-mRNA-1 |
| chr5_1 | three_prime_UTR | 24844164 | 24844170 | 24844164 | ID=Msa0725250-mRNA-1:three_prime_utr;Parent=Msa0725250-mRNA-1 |
| chr5_1 | three_prime_UTR | 24844464 | 24844528 | 24844464 | ID=Msa0725250-mRNA-1:three_prime_utr;Parent=Msa0725250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
