Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0263580 | XP_003597250.1 | 99.265 | 408 | 3 | 0 | 72 | 479 | 1 | 408 | 0.0 | 818 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0263580 | sp|Q9SKN2|DRB2_ARATH | 69.786 | 374 | 76 | 12 | 72 | 427 | 1 | 355 | 9.25e-162 | 467 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0263580 | G7IRT5 | 99.265 | 408 | 3 | 0 | 72 | 479 | 1 | 408 | 0.0 | 818 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0263580 | Msa0338730 | 0.912644 | 1.537771e-83 | -8.615850e-47 |
| Msa0263580 | Msa0422180 | -0.806110 | 9.642742e-50 | -8.615850e-47 |
| Msa0263580 | Msa0472960 | 0.805802 | 1.119663e-49 | -8.615850e-47 |
| Msa0263580 | Msa0864470 | 0.801577 | 8.433897e-49 | -8.615850e-47 |
| Msa0263580 | Msa1143020 | -0.805069 | 1.594998e-49 | -8.615850e-47 |
| Msa0263580 | Msa1208650 | 0.814012 | 1.913074e-51 | -8.615850e-47 |
| Msa0263580 | Msa1224580 | 0.823701 | 1.201970e-53 | -8.615850e-47 |
| Msa0263580 | Msa1241130 | 0.800974 | 1.120225e-48 | -8.615850e-47 |
| Msa0263580 | Msa1378680 | -0.802167 | 6.379141e-49 | -8.615850e-47 |
| Msa0263580 | Msa1406110 | 0.808074 | 3.703039e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0263580 | MtrunA17_Chr2g0326721 | 99.265 | 408 | 3 | 0 | 72 | 479 | 1 | 408 | 0.0 | 818 |
| Msa0263580 | MtrunA17_Chr4g0029001 | 74.937 | 395 | 73 | 8 | 72 | 458 | 1 | 377 | 0.0 | 555 |
| Msa0263580 | MtrunA17_Chr7g0273611 | 73.248 | 157 | 42 | 0 | 72 | 228 | 1 | 157 | 1.53e-78 | 253 |
| Msa0263580 | MtrunA17_Chr6g0461131 | 45.783 | 166 | 78 | 3 | 72 | 234 | 158 | 314 | 1.35e-33 | 133 |
| Msa0263580 | MtrunA17_Chr6g0456181 | 50.000 | 122 | 54 | 1 | 103 | 224 | 2 | 116 | 8.94e-25 | 99.0 |
| Msa0263580 | MtrunA17_Chr3g0132821 | 36.842 | 152 | 94 | 1 | 72 | 221 | 16 | 167 | 3.58e-21 | 97.1 |
| Msa0263580 | MtrunA17_Chr3g0118941 | 35.065 | 154 | 87 | 1 | 78 | 231 | 113 | 253 | 1.87e-19 | 90.1 |
| Msa0263580 | MtrunA17_Chr3g0118921 | 33.898 | 177 | 106 | 4 | 53 | 229 | 31 | 196 | 1.76e-18 | 86.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0263580 | AT2G28380.1 | 69.786 | 374 | 76 | 12 | 72 | 427 | 1 | 355 | 9.40e-163 | 467 |
| Msa0263580 | AT5G41070.1 | 47.578 | 351 | 128 | 6 | 72 | 388 | 1 | 329 | 1.14e-91 | 284 |
| Msa0263580 | AT3G26932.1 | 68.254 | 189 | 54 | 1 | 72 | 260 | 1 | 183 | 8.44e-86 | 268 |
| Msa0263580 | AT3G26932.2 | 68.254 | 189 | 54 | 1 | 72 | 260 | 1 | 183 | 8.44e-86 | 268 |
| Msa0263580 | AT3G62800.3 | 44.767 | 172 | 87 | 1 | 72 | 243 | 4 | 167 | 3.85e-33 | 128 |
| Msa0263580 | AT3G62800.2 | 44.767 | 172 | 87 | 1 | 72 | 243 | 4 | 167 | 4.17e-33 | 129 |
| Msa0263580 | AT3G62800.1 | 44.767 | 172 | 87 | 1 | 72 | 243 | 4 | 167 | 4.17e-33 | 129 |
| Msa0263580 | AT3G26932.3 | 55.140 | 107 | 42 | 1 | 154 | 260 | 25 | 125 | 1.70e-29 | 117 |
| Msa0263580 | AT1G09700.2 | 36.129 | 155 | 98 | 1 | 72 | 225 | 15 | 169 | 3.46e-21 | 94.0 |
| Msa0263580 | AT1G09700.1 | 35.849 | 159 | 101 | 1 | 72 | 229 | 15 | 173 | 1.76e-20 | 94.0 |
Find 154 sgRNAs with CRISPR-Local
Find 359 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAGTAATTAGTCATTTC+TGG | 0.167882 | 2_2:-63089845 | None:intergenic |
| TTGAATTTAACAGGACAAAA+TGG | 0.174733 | 2_2:-63094073 | None:intergenic |
| CAACCACCGGTAACAATTTC+CGG | 0.241648 | 2_2:+63089968 | Msa0263580:CDS |
| ACCAGAGACTTTGCAGAGTT+TGG | 0.262718 | 2_2:+63093916 | Msa0263580:CDS |
| TGCTCACATACTTGCTTAAA+AGG | 0.273080 | 2_2:-63094208 | None:intergenic |
| TGAATTTGGTGTGAGGGTTC+CGG | 0.292814 | 2_2:-63089947 | None:intergenic |
| TGTTTCGAGGTCCTGTCTTT+TGG | 0.298459 | 2_2:-63093418 | None:intergenic |
| TGCCAACCCTTGAATTTAAC+AGG | 0.302072 | 2_2:-63094082 | None:intergenic |
| ATCTGAAACTTCTTCTGAAA+TGG | 0.305888 | 2_2:-63093329 | None:intergenic |
| AGTTTCAGATTCAAAATATC+AGG | 0.307882 | 2_2:+63093342 | Msa0263580:CDS |
| TTGTTACCGGTGGTTGAATT+TGG | 0.308057 | 2_2:-63089961 | None:intergenic |
| TTGGCTGGAATCACATTTAC+TGG | 0.324826 | 2_2:+63092236 | Msa0263580:CDS |
| TGAAATGGAATCCGAGCATT+TGG | 0.336559 | 2_2:-63093314 | None:intergenic |
| AGAAAGTGGAGGAGCGAGAA+AGG | 0.339353 | 2_2:-63089909 | None:intergenic |
| CTGTAAAATTCAAAGCAGTT+TGG | 0.340927 | 2_2:+63094134 | Msa0263580:three_prime_UTR |
| AAAGCTACCGTTAACTTTAA+CGG | 0.347115 | 2_2:+63090163 | Msa0263580:CDS |
| TTCTCTCTCTAACTTCTTCC+CGG | 0.356807 | 2_2:+63089928 | Msa0263580:CDS |
| AGATTGTGGCTGCTGCAAAA+TGG | 0.364675 | 2_2:-63093513 | None:intergenic |
| TTGTCACTGGTTGCTGCGGC+TGG | 0.366524 | 2_2:-63093488 | None:intergenic |
| GAATTTGGTGTGAGGGTTCC+GGG | 0.367255 | 2_2:-63089946 | None:intergenic |
| TGAATTTAACAGGACAAAAT+GGG | 0.386934 | 2_2:-63094072 | None:intergenic |
| TTGCACCAGCAGTGTCTGTT+AGG | 0.397854 | 2_2:+63093633 | Msa0263580:CDS |
| CAAGGTCTCATTTGTCGAAT+AGG | 0.402182 | 2_2:-63093602 | None:intergenic |
| AATGGGGTAAGGAAGGAAAA+AGG | 0.405084 | 2_2:-63094055 | None:intergenic |
| CGCTAGCTCTTCAACTGAAC+CGG | 0.405610 | 2_2:+63093208 | Msa0263580:CDS |
| TTGCTCCTCCAGTCAGTATT+CGG | 0.408942 | 2_2:+63093738 | Msa0263580:CDS |
| GATCTCGCCGTTAAAGTTAA+CGG | 0.411163 | 2_2:-63090170 | None:intergenic |
| CCTCAGTGCATCAGATAATA+CGG | 0.415313 | 2_2:+63093699 | Msa0263580:CDS |
| AAGAAATTGCACAGCGAGTA+GGG | 0.416098 | 2_2:+63092141 | Msa0263580:CDS |
| ATACAATCAATGGTGGGAAA+TGG | 0.416117 | 2_2:-63090024 | None:intergenic |
| AGGAGCGAGAAAGGGAAAGG+AGG | 0.419889 | 2_2:-63089900 | None:intergenic |
| ACCTCAGAGGACGGGTCACC+CGG | 0.421213 | 2_2:-63093550 | None:intergenic |
| GGAGCGAGAAAGGGAAAGGA+GGG | 0.421873 | 2_2:-63089899 | None:intergenic |
| GAAAGTGGAGGAGCGAGAAA+GGG | 0.429337 | 2_2:-63089908 | None:intergenic |
| AGGGAAAGGAGGGGAAGTAG+AGG | 0.431223 | 2_2:-63089889 | None:intergenic |
| TCTGCGCCAGCTCTTGAAGC+TGG | 0.436751 | 2_2:-63090075 | None:intergenic |
| CCTCTGAGGTTCCCTGCAGC+AGG | 0.441013 | 2_2:+63093563 | Msa0263580:CDS |
| TAAGGTGGTGCTCCTGCTGC+AGG | 0.441480 | 2_2:-63093575 | None:intergenic |
| GGTGGGAAATGGATCGGGTC+GGG | 0.443681 | 2_2:-63090013 | None:intergenic |
| TTAAACCTCGGCGCGTGATC+GGG | 0.445389 | 2_2:-63090142 | None:intergenic |
| GGAAGCTTATCTTGCTCGAC+AGG | 0.445903 | 2_2:-63093845 | None:intergenic |
| TCATTTGCTGTTGCCGATGA+AGG | 0.446888 | 2_2:-63093443 | None:intergenic |
| TCCAAACTCTGCAAAGTCTC+TGG | 0.454293 | 2_2:-63093917 | None:intergenic |
| TGCCCCACGTGAATGTGAAC+CGG | 0.455130 | 2_2:+63094308 | Msa0263580:three_prime_UTR |
| AGTGGTGGGGCAGCAAATAC+AGG | 0.457509 | 2_2:-63093770 | None:intergenic |
| AAGAAGTTAGAGAGAGAAAG+TGG | 0.460853 | 2_2:-63089923 | None:intergenic |
| CAAGAAATTGCACAGCGAGT+AGG | 0.464337 | 2_2:+63092140 | Msa0263580:CDS |
| GATCGGGTCGGGTGATTCTC+CGG | 0.470180 | 2_2:-63090002 | None:intergenic |
| TCTAATTCGTCATTGTTCTC+CGG | 0.472629 | 2_2:-63093227 | None:intergenic |
| GCCGATGAAGGTCTGTTTCG+AGG | 0.478765 | 2_2:-63093431 | None:intergenic |
| TTCTCCGGTGACGGTGATGC+CGG | 0.481805 | 2_2:-63089987 | None:intergenic |
| TGGAGGAGCGAGAAAGGGAA+AGG | 0.481945 | 2_2:-63089903 | None:intergenic |
| CTTTCTATTGCAGAAGATTG+TGG | 0.482152 | 2_2:-63093527 | None:intergenic |
| GCTTGTTTCTTATTCTTCGC+AGG | 0.484965 | 2_2:-63092263 | None:intergenic |
| GTGATGCCGGAAATTGTTAC+CGG | 0.488042 | 2_2:-63089974 | None:intergenic |
| CTCTGCAAAGTCTCTGGTTG+TGG | 0.489504 | 2_2:-63093911 | None:intergenic |
| CCTCTAATTTGCCAAAAGAC+AGG | 0.495216 | 2_2:+63093407 | Msa0263580:CDS |
| CTGCAAAATGGACTTGTCAC+TGG | 0.496063 | 2_2:-63093501 | None:intergenic |
| CGGCGGAGTGTTCAGCTTGA+CGG | 0.499665 | 2_2:-63090222 | None:intergenic |
| TTGCTCGACAGGGGTACTAC+TGG | 0.502654 | 2_2:-63093834 | None:intergenic |
| TCACTGGTTGCTGCGGCTGG+CGG | 0.503236 | 2_2:-63093485 | None:intergenic |
| ATCTTCTGCAATAGAAAGCC+GGG | 0.504977 | 2_2:+63093532 | Msa0263580:CDS |
| TCCAGCTAAAATTCTTGAGA+TGG | 0.505790 | 2_2:+63093865 | Msa0263580:CDS |
| ACCTCGAAACAGACCTTCAT+CGG | 0.505989 | 2_2:+63093430 | Msa0263580:CDS |
| ATTTGTCGAATAGGAACATA+AGG | 0.510920 | 2_2:-63093593 | None:intergenic |
| AGGATCTTTGATGTGGTGGC+AGG | 0.510989 | 2_2:-63093383 | None:intergenic |
| GTCCTGTTAAATTCAAGGGT+TGG | 0.514066 | 2_2:+63094080 | Msa0263580:three_prime_UTR |
| GCTGGCGGATGCCTGCTTCG+AGG | 0.514564 | 2_2:-63093470 | None:intergenic |
| GTCGGGTGATTCTCCGGTGA+CGG | 0.516895 | 2_2:-63089996 | None:intergenic |
| ATCAATGGTGGGAAATGGAT+CGG | 0.519876 | 2_2:-63090019 | None:intergenic |
| TTTAAACCTCGGCGCGTGAT+CGG | 0.523259 | 2_2:-63090143 | None:intergenic |
| AATTTGAAATTTATTTGAGT+CGG | 0.527034 | 2_2:+63093949 | Msa0263580:exon |
| TCAATGGTGGGAAATGGATC+GGG | 0.528180 | 2_2:-63090018 | None:intergenic |
| TGCAGGGAACCTCAGAGGAC+GGG | 0.531360 | 2_2:-63093558 | None:intergenic |
| ACTGGGATAGTAGAATTGGC+TGG | 0.532365 | 2_2:+63092221 | Msa0263580:CDS |
| CAAGAACCAGCTTCAAGAGC+TGG | 0.532768 | 2_2:+63090069 | Msa0263580:CDS |
| CTGCAGGGAACCTCAGAGGA+CGG | 0.535825 | 2_2:-63093559 | None:intergenic |
| GTGGAGCATTTACTAATCAC+AGG | 0.536504 | 2_2:-63094257 | None:intergenic |
| TAACAGGACAAAATGGGGTA+AGG | 0.537009 | 2_2:-63094066 | None:intergenic |
| CAGTACACAACGTACAGATC+GGG | 0.538706 | 2_2:+63092176 | Msa0263580:CDS |
| AATCTTCTGCAATAGAAAGC+CGG | 0.539245 | 2_2:+63093531 | Msa0263580:CDS |
| TGATTGTATTCTCTCGAGAT+CGG | 0.539448 | 2_2:+63090038 | Msa0263580:CDS |
| CAAATGAAAATCCTCGAAGC+AGG | 0.540229 | 2_2:+63093459 | Msa0263580:CDS |
| CTCAGTGCATCAGATAATAC+GGG | 0.541912 | 2_2:+63093700 | Msa0263580:CDS |
| GCTGTGCAATTTCTTGCAAG+AGG | 0.545798 | 2_2:-63092133 | None:intergenic |
| GGGGAAGTAGAGGAGAGTAG+TGG | 0.549068 | 2_2:-63089879 | None:intergenic |
| ACAACGTACAGATCGGGCCT+TGG | 0.550437 | 2_2:+63092182 | Msa0263580:CDS |
| AGGACAAAATGGGGTAAGGA+AGG | 0.552845 | 2_2:-63094062 | None:intergenic |
| TCTCGAGAGAATACAATCAA+TGG | 0.557581 | 2_2:-63090034 | None:intergenic |
| ATTTCCGGCATCACCGTCAC+CGG | 0.558328 | 2_2:+63089983 | Msa0263580:CDS |
| AGGAAGGATCTTTGATGTGG+TGG | 0.559325 | 2_2:-63093387 | None:intergenic |
| TGCAAAGTCTCTGGTTGTGG+TGG | 0.559460 | 2_2:-63093908 | None:intergenic |
| TCAGTACACAACGTACAGAT+CGG | 0.563575 | 2_2:+63092175 | Msa0263580:CDS |
| CGGTGGTTGAATTTGGTGTG+AGG | 0.563834 | 2_2:-63089954 | None:intergenic |
| GAGCGAGAAAGGGAAAGGAG+GGG | 0.570684 | 2_2:-63089898 | None:intergenic |
| TACGTTGTGTACTGAGGCAA+TGG | 0.574585 | 2_2:-63092167 | None:intergenic |
| CGAGAGAATACAATCAATGG+TGG | 0.574998 | 2_2:-63090031 | None:intergenic |
| ACAGCTTGCCGAATACTGAC+TGG | 0.577074 | 2_2:-63093746 | None:intergenic |
| AAAATGCAGCTATGGCAGCT+TGG | 0.578374 | 2_2:+63092291 | Msa0263580:CDS |
| GCAGGAGATTGAGAACTAGT+TGG | 0.580017 | 2_2:-63093365 | None:intergenic |
| AGAATAGCAATACACAATTG+TGG | 0.580140 | 2_2:-63094276 | None:intergenic |
| TCCTACACTTGCATTCGTGA+AGG | 0.580295 | 2_2:+63090118 | Msa0263580:CDS |
| ACTGAGGTAGGTGGTGGAAG+AGG | 0.580987 | 2_2:-63093683 | None:intergenic |
| CTCAATTCGCTTTCTCACCG+TGG | 0.581619 | 2_2:+63090256 | Msa0263580:CDS |
| GGTGGTTGAATTTGGTGTGA+GGG | 0.587190 | 2_2:-63089953 | None:intergenic |
| GACAAATGAGACCTTGCCAT+GGG | 0.590266 | 2_2:+63093609 | Msa0263580:CDS |
| GAGGTAGGTGGTGGAAGAGG+TGG | 0.590298 | 2_2:-63093680 | None:intergenic |
| CAATGTCTAATCCAAATGCT+CGG | 0.593335 | 2_2:+63093303 | Msa0263580:CDS |
| ATTATCTGATGCACTGAGGT+AGG | 0.594850 | 2_2:-63093695 | None:intergenic |
| ACTGGAGGAGCAATTCGTAC+AGG | 0.597845 | 2_2:-63093728 | None:intergenic |
| TGGTGGGAAATGGATCGGGT+CGG | 0.602045 | 2_2:-63090014 | None:intergenic |
| CTCACACCAAATTCAACCAC+CGG | 0.602139 | 2_2:+63089955 | Msa0263580:CDS |
| ACACTGCTGGTGCAATCCCA+TGG | 0.608224 | 2_2:-63093625 | None:intergenic |
| TGATGCACTGAGGTAGGTGG+TGG | 0.611177 | 2_2:-63093689 | None:intergenic |
| GCTGGTGCAATCCCATGGCA+AGG | 0.611673 | 2_2:-63093620 | None:intergenic |
| TTTACTGAACTACCGTCTGA+AGG | 0.612047 | 2_2:+63093271 | Msa0263580:CDS |
| TCGACAGGGGTACTACTGGC+AGG | 0.615177 | 2_2:-63093830 | None:intergenic |
| TAGAGGAAGGATCTTTGATG+TGG | 0.615207 | 2_2:-63093390 | None:intergenic |
| GAATTTAACAGGACAAAATG+GGG | 0.615663 | 2_2:-63094071 | None:intergenic |
| TAGAACAGATCACTATAGCA+CGG | 0.616686 | 2_2:+63093246 | Msa0263580:CDS |
| TTAACGGTAGCTTTAAACCT+CGG | 0.616986 | 2_2:-63090154 | None:intergenic |
| AAGGTGGTGCTCCTGCTGCA+GGG | 0.618206 | 2_2:-63093574 | None:intergenic |
| GGAACTCACGAGGATCTTAG+CGG | 0.620328 | 2_2:-63090296 | None:intergenic |
| TCACGAATGCAAGTGTAGGA+AGG | 0.620807 | 2_2:-63090115 | None:intergenic |
| AGAACAGATCACTATAGCAC+GGG | 0.620906 | 2_2:+63093247 | Msa0263580:CDS |
| ACAGTCCTAACAGACACTGC+TGG | 0.621170 | 2_2:-63093638 | None:intergenic |
| CCTGCTGCAGGGAACCTCAG+AGG | 0.623949 | 2_2:-63093563 | None:intergenic |
| CAGGCCGGTTCACATTCACG+TGG | 0.628081 | 2_2:-63094312 | None:intergenic |
| GCCGGGTGACCCGTCCTCTG+AGG | 0.629007 | 2_2:+63093549 | Msa0263580:CDS |
| CGGTTCAGTTGAAGAGCTAG+CGG | 0.631534 | 2_2:-63093207 | None:intergenic |
| ATGCCGGAAATTGTTACCGG+TGG | 0.632060 | 2_2:-63089971 | None:intergenic |
| AGAAATTGCACAGCGAGTAG+GGG | 0.632106 | 2_2:+63092142 | Msa0263580:CDS |
| GAGAGAATACAATCAATGGT+GGG | 0.635754 | 2_2:-63090030 | None:intergenic |
| CGACAAATGAGACCTTGCCA+TGG | 0.640308 | 2_2:+63093608 | Msa0263580:CDS |
| AAGTTAGAGAGAGAAAGTGG+AGG | 0.641931 | 2_2:-63089920 | None:intergenic |
| GAAGCTTATCTTGCTCGACA+GGG | 0.645204 | 2_2:-63093844 | None:intergenic |
| AAGGTCCCGATCACGCGCCG+AGG | 0.646470 | 2_2:+63090137 | Msa0263580:CDS |
| GGACTTGTCACTGGTTGCTG+CGG | 0.650772 | 2_2:-63093492 | None:intergenic |
| GGAGGAGCAATTCGTACAGG+AGG | 0.651525 | 2_2:-63093725 | None:intergenic |
| GGCCGGTTCACATTCACGTG+GGG | 0.656154 | 2_2:-63094310 | None:intergenic |
| AGGCCGGTTCACATTCACGT+GGG | 0.656789 | 2_2:-63094311 | None:intergenic |
| TTAGCGGCGAGAGAGTGAGA+AGG | 0.659407 | 2_2:-63090280 | None:intergenic |
| AGAGGTGGTGCAGAGAACAC+AGG | 0.669848 | 2_2:-63093665 | None:intergenic |
| CGAATTGAGAGCAACTTCAG+CGG | 0.670336 | 2_2:-63090242 | None:intergenic |
| ACCTTCACGAATGCAAGTGT+AGG | 0.678200 | 2_2:-63090119 | None:intergenic |
| TGTCGAATAGGAACATAAGG+TGG | 0.683320 | 2_2:-63093590 | None:intergenic |
| ATTGAGAGCAACTTCAGCGG+CGG | 0.683410 | 2_2:-63090239 | None:intergenic |
| ATCTGATGCACTGAGGTAGG+TGG | 0.685042 | 2_2:-63093692 | None:intergenic |
| CGGAGAGTTGAACAGTAGTG+AGG | 0.687248 | 2_2:-63090202 | None:intergenic |
| CGAGAGAGTGAGAAGGACCA+CGG | 0.688054 | 2_2:-63090273 | None:intergenic |
| AAGCTTATCTTGCTCGACAG+GGG | 0.688854 | 2_2:-63093843 | None:intergenic |
| GCTTGCCGAATACTGACTGG+AGG | 0.696387 | 2_2:-63093743 | None:intergenic |
| GATCTGTACGTTGTGTACTG+AGG | 0.708993 | 2_2:-63092173 | None:intergenic |
| CCGTATTATCTGATGCACTG+AGG | 0.717181 | 2_2:-63093699 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAATCAATTATTCTAT+TGG | + | chr2_2:63090591-63090610 | Msa0263580:intron | 10.0% |
| !!! | GTTTTAATTTTAAAGTAAAA+AGG | - | chr2_2:63091100-63091119 | None:intergenic | 10.0% |
| !!! | AAAAATATTTTTTATTGACA+TGG | - | chr2_2:63091440-63091459 | None:intergenic | 10.0% |
| !! | AAAAAAAAAGATTGAATTTG+AGG | - | chr2_2:63090867-63090886 | None:intergenic | 15.0% |
| !!! | CTTTTGATTTGAATATATAT+TGG | - | chr2_2:63091882-63091901 | None:intergenic | 15.0% |
| !! | ATATATAAACATATTAGCAA+TGG | - | chr2_2:63092017-63092036 | None:intergenic | 15.0% |
| !! | ATAAAAATAAAAATTCAGGA+AGG | + | chr2_2:63092825-63092844 | Msa0263580:intron | 15.0% |
| !!! | AATTTGAAATTTATTTGAGT+CGG | + | chr2_2:63093949-63093968 | Msa0263580:exon | 15.0% |
| !! | GAATTTGAGGATTAATATAA+TGG | - | chr2_2:63090854-63090873 | None:intergenic | 20.0% |
| !!! | TTCTGTTTTCAAATAACTTT+TGG | - | chr2_2:63091317-63091336 | None:intergenic | 20.0% |
| !! | AAAGACTATATATCTGTAAT+GGG | - | chr2_2:63091698-63091717 | None:intergenic | 20.0% |
| !! | AATATATATTGGATACTTGA+AGG | - | chr2_2:63091871-63091890 | None:intergenic | 20.0% |
| !! | CCTAAAATAAATCCAATAAT+GGG | - | chr2_2:63091952-63091971 | None:intergenic | 20.0% |
| !!! | TGAAAAATTAGTTACTTTCA+TGG | + | chr2_2:63092355-63092374 | Msa0263580:intron | 20.0% |
| !! | TAAACAAATGTGAAAAATCA+GGG | - | chr2_2:63092458-63092477 | None:intergenic | 20.0% |
| !! | AAATTTATCTTATGGTATTG+TGG | + | chr2_2:63092513-63092532 | Msa0263580:intron | 20.0% |
| !! | AAGTTGGAATAAAAATATGT+AGG | - | chr2_2:63092661-63092680 | None:intergenic | 20.0% |
| !! | TTATAATATCACGTCTTTAA+AGG | - | chr2_2:63092688-63092707 | None:intergenic | 20.0% |
| !!! | ATTTTTTATTTCCCTTGTTA+AGG | + | chr2_2:63092784-63092803 | Msa0263580:intron | 20.0% |
| !! | AACTTGGAATAAAAATACTT+AGG | - | chr2_2:63093010-63093029 | None:intergenic | 20.0% |
| !!! | AATTTTACATCACTTGTTAT+AGG | - | chr2_2:63094028-63094047 | None:intergenic | 20.0% |
| ! | AAAGAGTAATTAGTCATTTC+TGG | - | chr2_2:63089848-63089867 | None:intergenic | 25.0% |
| !! | ACTATCAATGTTACTTAGAA+TGG | + | chr2_2:63090524-63090543 | Msa0263580:intron | 25.0% |
| !!! | ACACTTTTGCTATATACAAA+CGG | - | chr2_2:63090715-63090734 | None:intergenic | 25.0% |
| ! | CAAACTGTGTACTTAAAAAA+CGG | - | chr2_2:63090778-63090797 | None:intergenic | 25.0% |
| !!! | ATAATGGACCACTTAAAAAA+CGG | - | chr2_2:63090838-63090857 | None:intergenic | 25.0% |
| ! | ATATACATTAGACATTGTGT+TGG | - | chr2_2:63091182-63091201 | None:intergenic | 25.0% |
| ! | AATTCAATTTCAACCTTTCA+TGG | + | chr2_2:63091268-63091287 | Msa0263580:intron | 25.0% |
| ! | ATTTACCAATACTCAACTAT+GGG | - | chr2_2:63091380-63091399 | None:intergenic | 25.0% |
| ! | AATTTACCAATACTCAACTA+TGG | - | chr2_2:63091381-63091400 | None:intergenic | 25.0% |
| ! | TCATTAGCAACAACAATTAA+CGG | - | chr2_2:63091610-63091629 | None:intergenic | 25.0% |
| ! | CAAAGACTATATATCTGTAA+TGG | - | chr2_2:63091699-63091718 | None:intergenic | 25.0% |
| !! | ATATTCCACTTTAGAAGATA+AGG | - | chr2_2:63091782-63091801 | None:intergenic | 25.0% |
| ! | ATAATTCATACTGCATACAT+AGG | - | chr2_2:63091844-63091863 | None:intergenic | 25.0% |
| ! | GTTTCTTAGAAAAGGATAAT+TGG | + | chr2_2:63091905-63091924 | Msa0263580:intron | 25.0% |
| !!! | CCCATTATTGGATTTATTTT+AGG | + | chr2_2:63091949-63091968 | Msa0263580:intron | 25.0% |
| ! | GCCTAAAATAAATCCAATAA+TGG | - | chr2_2:63091953-63091972 | None:intergenic | 25.0% |
| ! | AAACATATTAGCAATGGTAT+CGG | - | chr2_2:63092011-63092030 | None:intergenic | 25.0% |
| ! | GTTTATATATCAACACTGAT+TGG | + | chr2_2:63092027-63092046 | Msa0263580:intron | 25.0% |
| !!! | GTCTTTAAAACAATGTAAGT+GGG | + | chr2_2:63092316-63092335 | Msa0263580:intron | 25.0% |
| !! | GTTACTTTCATGGAAATATA+TGG | + | chr2_2:63092365-63092384 | Msa0263580:intron | 25.0% |
| ! | CTAAACAAATGTGAAAAATC+AGG | - | chr2_2:63092459-63092478 | None:intergenic | 25.0% |
| !! | CTGATTTTTCACATTTGTTT+AGG | + | chr2_2:63092457-63092476 | Msa0263580:intron | 25.0% |
| ! | TGGCTGAAAAATTTATCTTA+TGG | + | chr2_2:63092505-63092524 | Msa0263580:intron | 25.0% |
| ! | TCCATAATTTATTTGTCTTC+AGG | + | chr2_2:63092591-63092610 | Msa0263580:intron | 25.0% |
| ! | CCATAATTTATTTGTCTTCA+GGG | + | chr2_2:63092592-63092611 | Msa0263580:intron | 25.0% |
| ! | AGAGACAGAAAATGATAAAA+TGG | - | chr2_2:63092755-63092774 | None:intergenic | 25.0% |
| !! | TTTTATCATTTTCTGTCTCT+CGG | + | chr2_2:63092755-63092774 | Msa0263580:intron | 25.0% |
| ! | AAAATAAAAATTCAGGAAGG+AGG | + | chr2_2:63092828-63092847 | Msa0263580:intron | 25.0% |
| ! | AAATAAAAATTCAGGAAGGA+GGG | + | chr2_2:63092829-63092848 | Msa0263580:intron | 25.0% |
| ! | GTTGTTCAATGAATTTAACT+TGG | - | chr2_2:63093026-63093045 | None:intergenic | 25.0% |
| ! | GACAAATGTAACAAACTATA+CGG | - | chr2_2:63093068-63093087 | None:intergenic | 25.0% |
| ! | TTTATTTCCCTTGTAAAGAA+TGG | + | chr2_2:63093134-63093153 | Msa0263580:intron | 25.0% |
| !!! | ATAATTTCCTTTTTCATCAG+TGG | + | chr2_2:63093175-63093194 | Msa0263580:intron | 25.0% |
| ! | AGTTTCAGATTCAAAATATC+AGG | + | chr2_2:63093342-63093361 | Msa0263580:CDS | 25.0% |
| ! | TGAATTTAACAGGACAAAAT+GGG | - | chr2_2:63094075-63094094 | None:intergenic | 25.0% |
| ! | TTGAATTTAACAGGACAAAA+TGG | - | chr2_2:63094076-63094095 | None:intergenic | 25.0% |
| !! | ATTTTGTCCTGTTAAATTCA+AGG | + | chr2_2:63094075-63094094 | Msa0263580:three_prime_UTR | 25.0% |
| !! | TTTTGTCCTGTTAAATTCAA+GGG | + | chr2_2:63094076-63094095 | Msa0263580:three_prime_UTR | 25.0% |
| AAAGCTACCGTTAACTTTAA+CGG | + | chr2_2:63090163-63090182 | Msa0263580:CDS | 30.0% | |
| CATTGAAATGAGAGAGAAAA+CGG | - | chr2_2:63090320-63090339 | None:intergenic | 30.0% | |
| AAACAAAGCACATCACAAAA+AGG | - | chr2_2:63090464-63090483 | None:intergenic | 30.0% | |
| !!! | TTTTGTGATGTGCTTTGTTT+TGG | + | chr2_2:63090464-63090483 | Msa0263580:intron | 30.0% |
| ! | TTTGGATGATAATGTTTGTG+CGG | + | chr2_2:63090655-63090674 | Msa0263580:intron | 30.0% |
| !! | TTTTAAGTACACAGTTTGAG+TGG | + | chr2_2:63090780-63090799 | Msa0263580:intron | 30.0% |
| TTTAAGTACACAGTTTGAGT+GGG | + | chr2_2:63090781-63090800 | Msa0263580:intron | 30.0% | |
| !! | TTTTGTTTCAAAGAGTCTAG+CGG | + | chr2_2:63090886-63090905 | Msa0263580:intron | 30.0% |
| ATCTTAAGAGTTGTACTTAC+AGG | + | chr2_2:63090996-63091015 | Msa0263580:intron | 30.0% | |
| CACAATGTCTAATGTATATG+CGG | + | chr2_2:63091183-63091202 | Msa0263580:intron | 30.0% | |
| GATATGCATGCACATATATA+TGG | + | chr2_2:63091217-63091236 | Msa0263580:intron | 30.0% | |
| TATACTCAACTATCCATGAA+AGG | - | chr2_2:63091284-63091303 | None:intergenic | 30.0% | |
| TATTGGTAAATTGTCCAAGA+GGG | + | chr2_2:63091389-63091408 | Msa0263580:intron | 30.0% | |
| AGAAATGTTTGTGCTTCATA+GGG | + | chr2_2:63091555-63091574 | Msa0263580:intron | 30.0% | |
| TAAATCTTCTTTCATGGTGA+GGG | + | chr2_2:63091653-63091672 | Msa0263580:intron | 30.0% | |
| AGATCTAAAAGTGGAATACA+AGG | + | chr2_2:63091736-63091755 | Msa0263580:intron | 30.0% | |
| GATCTAAAAGTGGAATACAA+GGG | + | chr2_2:63091737-63091756 | Msa0263580:intron | 30.0% | |
| !! | TCTTCTAAAGTGGAATATGT+AGG | + | chr2_2:63091784-63091803 | Msa0263580:intron | 30.0% |
| AAAAGCGAGTTTCTTAGAAA+AGG | + | chr2_2:63091897-63091916 | Msa0263580:intron | 30.0% | |
| AAAAGAACACATTTAGCACA+AGG | - | chr2_2:63091978-63091997 | None:intergenic | 30.0% | |
| AACATATTAGCAATGGTATC+GGG | - | chr2_2:63092010-63092029 | None:intergenic | 30.0% | |
| !!! | TATCACGCTCAACTTTTTTT+AGG | + | chr2_2:63092088-63092107 | Msa0263580:intron | 30.0% |
| !!! | AACTTTTTTTAGGATGAGAC+TGG | + | chr2_2:63092098-63092117 | Msa0263580:intron | 30.0% |
| TAAAAACAGGTAAATGTCCA+AGG | - | chr2_2:63092202-63092221 | None:intergenic | 30.0% | |
| !!! | GACATTTACCTGTTTTTACT+GGG | + | chr2_2:63092204-63092223 | Msa0263580:CDS | 30.0% |
| ! | TTTTACTGGGATAGTAGAAT+TGG | + | chr2_2:63092217-63092236 | Msa0263580:CDS | 30.0% |
| !! | CGTCTTTAAAACAATGTAAG+TGG | + | chr2_2:63092315-63092334 | Msa0263580:intron | 30.0% |
| ! | TTTAAAACAATGTAAGTGGG+TGG | + | chr2_2:63092319-63092338 | Msa0263580:intron | 30.0% |
| ATGTGAAAAATCAGGGAAAT+AGG | - | chr2_2:63092451-63092470 | None:intergenic | 30.0% | |
| TCACATTTGTTTAGGTCTTT+AGG | + | chr2_2:63092465-63092484 | Msa0263580:intron | 30.0% | |
| !! | AATTTTTCAGCCAAAATCAC+TGG | - | chr2_2:63092498-63092517 | None:intergenic | 30.0% |
| CCCTGAAGACAAATAAATTA+TGG | - | chr2_2:63092595-63092614 | None:intergenic | 30.0% | |
| ! | TACAGTGTTGAAGATCATAT+TGG | - | chr2_2:63092618-63092637 | None:intergenic | 30.0% |
| ACTGTAATAACAAACCTTCT+TGG | + | chr2_2:63092632-63092651 | Msa0263580:intron | 30.0% | |
| ! | CGTCTTTAAAGGATTTAAGT+TGG | - | chr2_2:63092677-63092696 | None:intergenic | 30.0% |
| AAAAATCCAGTCCTTAACAA+GGG | - | chr2_2:63092798-63092817 | None:intergenic | 30.0% | |
| AAAAAATCCAGTCCTTAACA+AGG | - | chr2_2:63092799-63092818 | None:intergenic | 30.0% | |
| GTTACAGACTGAAATATGAA+CGG | + | chr2_2:63092963-63092982 | Msa0263580:intron | 30.0% | |
| TTACAGACTGAAATATGAAC+GGG | + | chr2_2:63092964-63092983 | Msa0263580:intron | 30.0% | |
| TTACACAGAAAATGCTTAAG+TGG | - | chr2_2:63093101-63093120 | None:intergenic | 30.0% | |
| ATTCAGTCCATTCTTTACAA+GGG | - | chr2_2:63093144-63093163 | None:intergenic | 30.0% | |
| TATTCAGTCCATTCTTTACA+AGG | - | chr2_2:63093145-63093164 | None:intergenic | 30.0% | |
| ! | ATCTGAAACTTCTTCTGAAA+TGG | - | chr2_2:63093332-63093351 | None:intergenic | 30.0% |
| ATTTGTCGAATAGGAACATA+AGG | - | chr2_2:63093596-63093615 | None:intergenic | 30.0% | |
| CTATCACAACAAAAACATGA+TGG | - | chr2_2:63093993-63094012 | None:intergenic | 30.0% | |
| !! | ATGTTTTTGTTGTGATAGCT+TGG | + | chr2_2:63093995-63094014 | Msa0263580:three_prime_UTR | 30.0% |
| GAATTTAACAGGACAAAATG+GGG | - | chr2_2:63094074-63094093 | None:intergenic | 30.0% | |
| CTGTAAAATTCAAAGCAGTT+TGG | + | chr2_2:63094134-63094153 | Msa0263580:three_prime_UTR | 30.0% | |
| AGAATAGCAATACACAATTG+TGG | - | chr2_2:63094279-63094298 | None:intergenic | 30.0% | |
| AAGAAGTTAGAGAGAGAAAG+TGG | - | chr2_2:63089926-63089945 | None:intergenic | 35.0% | |
| ! | ATACAATCAATGGTGGGAAA+TGG | - | chr2_2:63090027-63090046 | None:intergenic | 35.0% |
| GAGAGAATACAATCAATGGT+GGG | - | chr2_2:63090033-63090052 | None:intergenic | 35.0% | |
| TCTCGAGAGAATACAATCAA+TGG | - | chr2_2:63090037-63090056 | None:intergenic | 35.0% | |
| TGATTGTATTCTCTCGAGAT+CGG | + | chr2_2:63090038-63090057 | Msa0263580:CDS | 35.0% | |
| !! | TTAACGGTAGCTTTAAACCT+CGG | - | chr2_2:63090157-63090176 | None:intergenic | 35.0% |
| !!! | TCAATGTCGCTTTTCGTTTT+AGG | + | chr2_2:63090334-63090353 | Msa0263580:intron | 35.0% |
| CAAACTCACTTTGATGCATT+AGG | - | chr2_2:63090639-63090658 | None:intergenic | 35.0% | |
| CTAATGCATCAAAGTGAGTT+TGG | + | chr2_2:63090637-63090656 | Msa0263580:intron | 35.0% | |
| ! | TTGGATGATAATGTTTGTGC+GGG | + | chr2_2:63090656-63090675 | Msa0263580:intron | 35.0% |
| CACAGTATGAGTTGTACTTA+TGG | + | chr2_2:63090745-63090764 | Msa0263580:intron | 35.0% | |
| TTAAGTACACAGTTTGAGTG+GGG | + | chr2_2:63090782-63090801 | Msa0263580:intron | 35.0% | |
| TGGTGTTTGGAAAATTACAG+TGG | + | chr2_2:63090807-63090826 | Msa0263580:intron | 35.0% | |
| !!! | TGGTTTGACCGTTTTTTAAG+TGG | + | chr2_2:63090827-63090846 | Msa0263580:intron | 35.0% |
| GCAAACAAATTGATATGCTG+GGG | - | chr2_2:63090968-63090987 | None:intergenic | 35.0% | |
| CGCAAACAAATTGATATGCT+GGG | - | chr2_2:63090969-63090988 | None:intergenic | 35.0% | |
| TCGCAAACAAATTGATATGC+TGG | - | chr2_2:63090970-63090989 | None:intergenic | 35.0% | |
| TGCTGCAAAGATTGAATATG+AGG | - | chr2_2:63091025-63091044 | None:intergenic | 35.0% | |
| TCTAATGTATATGCGGCAAT+GGG | + | chr2_2:63091190-63091209 | Msa0263580:intron | 35.0% | |
| ! | GTATTGGTAAATTGTCCAAG+AGG | + | chr2_2:63091388-63091407 | Msa0263580:intron | 35.0% |
| TTGTAATCAGACACCTAGTA+AGG | + | chr2_2:63091459-63091478 | Msa0263580:intron | 35.0% | |
| ! | GTGTTATGCATGTGTTTTAC+CGG | + | chr2_2:63091483-63091502 | Msa0263580:intron | 35.0% |
| ATTTCTCCATCTTCAAGAGT+TGG | - | chr2_2:63091541-63091560 | None:intergenic | 35.0% | |
| GAGAAATGTTTGTGCTTCAT+AGG | + | chr2_2:63091554-63091573 | Msa0263580:intron | 35.0% | |
| GAAAGAAGATTTACAGCACT+AGG | - | chr2_2:63091646-63091665 | None:intergenic | 35.0% | |
| GTGCTGTAAATCTTCTTTCA+TGG | + | chr2_2:63091647-63091666 | Msa0263580:intron | 35.0% | |
| GTAAATCTTCTTTCATGGTG+AGG | + | chr2_2:63091652-63091671 | Msa0263580:intron | 35.0% | |
| AAATCTTCTTTCATGGTGAG+GGG | + | chr2_2:63091654-63091673 | Msa0263580:intron | 35.0% | |
| ! | CACTTTTAGATCTTTCGTGT+AGG | - | chr2_2:63091729-63091748 | None:intergenic | 35.0% |
| CTACACGAAAGATCTAAAAG+TGG | + | chr2_2:63091727-63091746 | Msa0263580:intron | 35.0% | |
| ! | CTTCACCTTATCTTCTAAAG+TGG | + | chr2_2:63091774-63091793 | Msa0263580:intron | 35.0% |
| !!! | GGACATTTACCTGTTTTTAC+TGG | + | chr2_2:63092203-63092222 | Msa0263580:CDS | 35.0% |
| TCTACTATCCCAGTAAAAAC+AGG | - | chr2_2:63092215-63092234 | None:intergenic | 35.0% | |
| CTCGTCTTCTGAATATACAT+AGG | + | chr2_2:63092400-63092419 | Msa0263580:intron | 35.0% | |
| AATAGGCTTGAGTTAGGTAT+TGG | - | chr2_2:63092434-63092453 | None:intergenic | 35.0% | |
| !! | TGTTTAGGTCTTTAGGACAT+TGG | + | chr2_2:63092472-63092491 | Msa0263580:intron | 35.0% |
| CTTATGGTATTGTGGTGAAT+CGG | + | chr2_2:63092521-63092540 | Msa0263580:intron | 35.0% | |
| AATGGCTTAAATTGTGCCAA+AGG | - | chr2_2:63092737-63092756 | None:intergenic | 35.0% | |
| TTATTTCCCTTGTTAAGGAC+TGG | + | chr2_2:63092789-63092808 | Msa0263580:intron | 35.0% | |
| ! | AGGAGGGAATTTTATTGAAG+TGG | + | chr2_2:63092845-63092864 | Msa0263580:intron | 35.0% |
| GATTTGAACTCACTACATTG+AGG | + | chr2_2:63092900-63092919 | Msa0263580:intron | 35.0% | |
| ! | TCTTTTGCCACTGATGAAAA+AGG | - | chr2_2:63093185-63093204 | None:intergenic | 35.0% |
| TCTAATTCGTCATTGTTCTC+CGG | - | chr2_2:63093230-63093249 | None:intergenic | 35.0% | |
| TAGAACAGATCACTATAGCA+CGG | + | chr2_2:63093246-63093265 | Msa0263580:CDS | 35.0% | |
| ! | TTGACATCTTTTCCTTCAGA+CGG | - | chr2_2:63093286-63093305 | None:intergenic | 35.0% |
| CAATGTCTAATCCAAATGCT+CGG | + | chr2_2:63093303-63093322 | Msa0263580:CDS | 35.0% | |
| ! | TCTTTTGGCAAATTAGAGGA+AGG | - | chr2_2:63093406-63093425 | None:intergenic | 35.0% |
| CTTTCTATTGCAGAAGATTG+TGG | - | chr2_2:63093530-63093549 | None:intergenic | 35.0% | |
| AATCTTCTGCAATAGAAAGC+CGG | + | chr2_2:63093531-63093550 | Msa0263580:CDS | 35.0% | |
| ! | TTCATCTTTTCTTAGTGGTG+GGG | - | chr2_2:63093786-63093805 | None:intergenic | 35.0% |
| ! | GTTCATCTTTTCTTAGTGGT+GGG | - | chr2_2:63093787-63093806 | None:intergenic | 35.0% |
| TCCAGCTAAAATTCTTGAGA+TGG | + | chr2_2:63093865-63093884 | Msa0263580:CDS | 35.0% | |
| !! | TCCATCTCAAGAATTTTAGC+TGG | - | chr2_2:63093869-63093888 | None:intergenic | 35.0% |
| TGCTCACATACTTGCTTAAA+AGG | - | chr2_2:63094211-63094230 | None:intergenic | 35.0% | |
| AAGTTAGAGAGAGAAAGTGG+AGG | - | chr2_2:63089923-63089942 | None:intergenic | 40.0% | |
| TTCTCTCTCTAACTTCTTCC+CGG | + | chr2_2:63089928-63089947 | Msa0263580:CDS | 40.0% | |
| TTGTTACCGGTGGTTGAATT+TGG | - | chr2_2:63089964-63089983 | None:intergenic | 40.0% | |
| ! | ATCAATGGTGGGAAATGGAT+CGG | - | chr2_2:63090022-63090041 | None:intergenic | 40.0% |
| CGAGAGAATACAATCAATGG+TGG | - | chr2_2:63090034-63090053 | None:intergenic | 40.0% | |
| GATCTCGCCGTTAAAGTTAA+CGG | - | chr2_2:63090173-63090192 | None:intergenic | 40.0% | |
| !!! | TGTGCTTTGTTTTGGAGCTT+AGG | + | chr2_2:63090472-63090491 | Msa0263580:intron | 40.0% |
| ! | TGGATGATAATGTTTGTGCG+GGG | + | chr2_2:63090657-63090676 | Msa0263580:intron | 40.0% |
| TAAGTACACAGTTTGAGTGG+GGG | + | chr2_2:63090783-63090802 | Msa0263580:intron | 40.0% | |
| CTCACTATGAGCTAAGATGT+GGG | + | chr2_2:63090920-63090939 | Msa0263580:intron | 40.0% | |
| TCACTATGAGCTAAGATGTG+GGG | + | chr2_2:63090921-63090940 | Msa0263580:intron | 40.0% | |
| GTCTAATGTATATGCGGCAA+TGG | + | chr2_2:63091189-63091208 | Msa0263580:intron | 40.0% | |
| CTAATGTATATGCGGCAATG+GGG | + | chr2_2:63091191-63091210 | Msa0263580:intron | 40.0% | |
| GTCAACCCATAGTTGAGTAT+TGG | + | chr2_2:63091372-63091391 | Msa0263580:intron | 40.0% | |
| ACATGGAAATGTGCCATACA+TGG | - | chr2_2:63091423-63091442 | None:intergenic | 40.0% | |
| CATGCATAACACTCCTTACT+AGG | - | chr2_2:63091475-63091494 | None:intergenic | 40.0% | |
| CTTTCTTCTGACAAAAACGC+CGG | - | chr2_2:63091505-63091524 | None:intergenic | 40.0% | |
| AATACAAGGGATACCACCTT+TGG | + | chr2_2:63091750-63091769 | Msa0263580:intron | 40.0% | |
| GAAGATAAGGTGAAGACCAA+AGG | - | chr2_2:63091769-63091788 | None:intergenic | 40.0% | |
| AAGGATAATTGGTCCACTGA+TGG | + | chr2_2:63091916-63091935 | Msa0263580:intron | 40.0% | |
| AGGATAATTGGTCCACTGAT+GGG | + | chr2_2:63091917-63091936 | Msa0263580:intron | 40.0% | |
| AAGAAATTGCACAGCGAGTA+GGG | + | chr2_2:63092141-63092160 | Msa0263580:CDS | 40.0% | |
| TCAGTACACAACGTACAGAT+CGG | + | chr2_2:63092175-63092194 | Msa0263580:CDS | 40.0% | |
| TTGGCTGGAATCACATTTAC+TGG | + | chr2_2:63092236-63092255 | Msa0263580:CDS | 40.0% | |
| ! | GCTTGTTTCTTATTCTTCGC+AGG | - | chr2_2:63092266-63092285 | None:intergenic | 40.0% |
| ! | TGCCATAGCTGCATTTTTCT+CGG | - | chr2_2:63092288-63092307 | None:intergenic | 40.0% |
| !! | TGAGTTAGGTATTGGCTTTG+TGG | - | chr2_2:63092426-63092445 | None:intergenic | 40.0% |
| AAATATGTAGGCGTCCAAGA+AGG | - | chr2_2:63092649-63092668 | None:intergenic | 40.0% | |
| ! | AAGGTAACAAGCTTTATGGC+AGG | - | chr2_2:63092718-63092737 | None:intergenic | 40.0% |
| !! | GCCATAAAGCTTGTTACCTT+TGG | + | chr2_2:63092718-63092737 | Msa0263580:intron | 40.0% |
| GCCAAAGGTAACAAGCTTTA+TGG | - | chr2_2:63092722-63092741 | None:intergenic | 40.0% | |
| TTCAGTCTGTAACACACTTG+AGG | - | chr2_2:63092956-63092975 | None:intergenic | 40.0% | |
| AGAACAGATCACTATAGCAC+GGG | + | chr2_2:63093247-63093266 | Msa0263580:CDS | 40.0% | |
| TTTACTGAACTACCGTCTGA+AGG | + | chr2_2:63093271-63093290 | Msa0263580:CDS | 40.0% | |
| TGAAATGGAATCCGAGCATT+TGG | - | chr2_2:63093317-63093336 | None:intergenic | 40.0% | |
| TAGAGGAAGGATCTTTGATG+TGG | - | chr2_2:63093393-63093412 | None:intergenic | 40.0% | |
| ! | CCTGTCTTTTGGCAAATTAG+AGG | - | chr2_2:63093410-63093429 | None:intergenic | 40.0% |
| ! | CCTCTAATTTGCCAAAAGAC+AGG | + | chr2_2:63093407-63093426 | Msa0263580:CDS | 40.0% |
| CAAATGAAAATCCTCGAAGC+AGG | + | chr2_2:63093459-63093478 | Msa0263580:CDS | 40.0% | |
| ATCTTCTGCAATAGAAAGCC+GGG | + | chr2_2:63093532-63093551 | Msa0263580:CDS | 40.0% | |
| TGTCGAATAGGAACATAAGG+TGG | - | chr2_2:63093593-63093612 | None:intergenic | 40.0% | |
| CAAGGTCTCATTTGTCGAAT+AGG | - | chr2_2:63093605-63093624 | None:intergenic | 40.0% | |
| ATTATCTGATGCACTGAGGT+AGG | - | chr2_2:63093698-63093717 | None:intergenic | 40.0% | |
| CCTCAGTGCATCAGATAATA+CGG | + | chr2_2:63093699-63093718 | Msa0263580:CDS | 40.0% | |
| CTCAGTGCATCAGATAATAC+GGG | + | chr2_2:63093700-63093719 | Msa0263580:CDS | 40.0% | |
| ! | GGTTCATCTTTTCTTAGTGG+TGG | - | chr2_2:63093788-63093807 | None:intergenic | 40.0% |
| ! | GCAGGTTCATCTTTTCTTAG+TGG | - | chr2_2:63093791-63093810 | None:intergenic | 40.0% |
| ! | TACTGGCAGGTAGATCTTTT+TGG | - | chr2_2:63093820-63093839 | None:intergenic | 40.0% |
| GGTAAGGAAGGAAAAAGGAA+GGG | - | chr2_2:63094053-63094072 | None:intergenic | 40.0% | |
| AATGGGGTAAGGAAGGAAAA+AGG | - | chr2_2:63094058-63094077 | None:intergenic | 40.0% | |
| TAACAGGACAAAATGGGGTA+AGG | - | chr2_2:63094069-63094088 | None:intergenic | 40.0% | |
| GTCCTGTTAAATTCAAGGGT+TGG | + | chr2_2:63094080-63094099 | Msa0263580:three_prime_UTR | 40.0% | |
| TGCCAACCCTTGAATTTAAC+AGG | - | chr2_2:63094085-63094104 | None:intergenic | 40.0% | |
| ! | GTGGAGCATTTACTAATCAC+AGG | - | chr2_2:63094260-63094279 | None:intergenic | 40.0% |
| !! | TGAATTTGGTGTGAGGGTTC+CGG | - | chr2_2:63089950-63089969 | None:intergenic | 45.0% |
| !! | GGTGGTTGAATTTGGTGTGA+GGG | - | chr2_2:63089956-63089975 | None:intergenic | 45.0% |
| CTCACACCAAATTCAACCAC+CGG | + | chr2_2:63089955-63089974 | Msa0263580:CDS | 45.0% | |
| CAACCACCGGTAACAATTTC+CGG | + | chr2_2:63089968-63089987 | Msa0263580:CDS | 45.0% | |
| GTGATGCCGGAAATTGTTAC+CGG | - | chr2_2:63089977-63089996 | None:intergenic | 45.0% | |
| ! | TCAATGGTGGGAAATGGATC+GGG | - | chr2_2:63090021-63090040 | None:intergenic | 45.0% |
| TCACGAATGCAAGTGTAGGA+AGG | - | chr2_2:63090118-63090137 | None:intergenic | 45.0% | |
| TCCTACACTTGCATTCGTGA+AGG | + | chr2_2:63090118-63090137 | Msa0263580:CDS | 45.0% | |
| ACCTTCACGAATGCAAGTGT+AGG | - | chr2_2:63090122-63090141 | None:intergenic | 45.0% | |
| CGAATTGAGAGCAACTTCAG+CGG | - | chr2_2:63090245-63090264 | None:intergenic | 45.0% | |
| ! | GGATGATAATGTTTGTGCGG+GGG | + | chr2_2:63090658-63090677 | Msa0263580:intron | 45.0% |
| GGATTATGCTCAGGGAATCA+CGG | + | chr2_2:63090679-63090698 | Msa0263580:intron | 45.0% | |
| GCTCACTATGAGCTAAGATG+TGG | + | chr2_2:63090919-63090938 | Msa0263580:intron | 45.0% | |
| GAAATGTGCCATACATGGCT+AGG | - | chr2_2:63091418-63091437 | None:intergenic | 45.0% | |
| GACACTCCAACTCTTGAAGA+TGG | + | chr2_2:63091532-63091551 | Msa0263580:intron | 45.0% | |
| !! | GTGCTTCATAGGGTGTTGAT+AGG | + | chr2_2:63091565-63091584 | Msa0263580:intron | 45.0% |
| TTTCATGGTGAGGGGATACA+GGG | + | chr2_2:63091662-63091681 | Msa0263580:intron | 45.0% | |
| GATAAGGTGAAGACCAAAGG+TGG | - | chr2_2:63091766-63091785 | None:intergenic | 45.0% | |
| GCTGTGCAATTTCTTGCAAG+AGG | - | chr2_2:63092136-63092155 | None:intergenic | 45.0% | |
| CAAGAAATTGCACAGCGAGT+AGG | + | chr2_2:63092140-63092159 | Msa0263580:CDS | 45.0% | |
| AGAAATTGCACAGCGAGTAG+GGG | + | chr2_2:63092142-63092161 | Msa0263580:CDS | 45.0% | |
| TACGTTGTGTACTGAGGCAA+TGG | - | chr2_2:63092170-63092189 | None:intergenic | 45.0% | |
| GATCTGTACGTTGTGTACTG+AGG | - | chr2_2:63092176-63092195 | None:intergenic | 45.0% | |
| CAGTACACAACGTACAGATC+GGG | + | chr2_2:63092176-63092195 | Msa0263580:CDS | 45.0% | |
| ACTGGGATAGTAGAATTGGC+TGG | + | chr2_2:63092221-63092240 | Msa0263580:CDS | 45.0% | |
| AGCCGAGAAAAATGCAGCTA+TGG | + | chr2_2:63092283-63092302 | Msa0263580:CDS | 45.0% | |
| AAAATGCAGCTATGGCAGCT+TGG | + | chr2_2:63092291-63092310 | Msa0263580:CDS | 45.0% | |
| CAGGGAAATAGGCTTGAGTT+AGG | - | chr2_2:63092440-63092459 | None:intergenic | 45.0% | |
| ! | AGGACATTGGCCAGTGATTT+TGG | + | chr2_2:63092485-63092504 | Msa0263580:intron | 45.0% |
| TAGTGAGTTCAAATCCCCTC+GGG | - | chr2_2:63092895-63092914 | None:intergenic | 45.0% | |
| GTAGTGAGTTCAAATCCCCT+CGG | - | chr2_2:63092896-63092915 | None:intergenic | 45.0% | |
| GCAGGAGATTGAGAACTAGT+TGG | - | chr2_2:63093368-63093387 | None:intergenic | 45.0% | |
| AGGAAGGATCTTTGATGTGG+TGG | - | chr2_2:63093390-63093409 | None:intergenic | 45.0% | |
| ! | TGTTTCGAGGTCCTGTCTTT+TGG | - | chr2_2:63093421-63093440 | None:intergenic | 45.0% |
| ACCTCGAAACAGACCTTCAT+CGG | + | chr2_2:63093430-63093449 | Msa0263580:CDS | 45.0% | |
| !! | TCATTTGCTGTTGCCGATGA+AGG | - | chr2_2:63093446-63093465 | None:intergenic | 45.0% |
| ! | CTGCAAAATGGACTTGTCAC+TGG | - | chr2_2:63093504-63093523 | None:intergenic | 45.0% |
| AGATTGTGGCTGCTGCAAAA+TGG | - | chr2_2:63093516-63093535 | None:intergenic | 45.0% | |
| GACAAATGAGACCTTGCCAT+GGG | + | chr2_2:63093609-63093628 | Msa0263580:CDS | 45.0% | |
| CCGTATTATCTGATGCACTG+AGG | - | chr2_2:63093702-63093721 | None:intergenic | 45.0% | |
| TTGCTCCTCCAGTCAGTATT+CGG | + | chr2_2:63093738-63093757 | Msa0263580:CDS | 45.0% | |
| ! | AGGTAGATCTTTTTGGACGG+GGG | - | chr2_2:63093813-63093832 | None:intergenic | 45.0% |
| ! | CAGGTAGATCTTTTTGGACG+GGG | - | chr2_2:63093814-63093833 | None:intergenic | 45.0% |
| ! | GCAGGTAGATCTTTTTGGAC+GGG | - | chr2_2:63093815-63093834 | None:intergenic | 45.0% |
| ! | GGCAGGTAGATCTTTTTGGA+CGG | - | chr2_2:63093816-63093835 | None:intergenic | 45.0% |
| AAGCTTATCTTGCTCGACAG+GGG | - | chr2_2:63093846-63093865 | None:intergenic | 45.0% | |
| GAAGCTTATCTTGCTCGACA+GGG | - | chr2_2:63093847-63093866 | None:intergenic | 45.0% | |
| ACCAGAGACTTTGCAGAGTT+TGG | + | chr2_2:63093916-63093935 | Msa0263580:CDS | 45.0% | |
| TCCAAACTCTGCAAAGTCTC+TGG | - | chr2_2:63093920-63093939 | None:intergenic | 45.0% | |
| GGGTAAGGAAGGAAAAAGGA+AGG | - | chr2_2:63094054-63094073 | None:intergenic | 45.0% | |
| AGGACAAAATGGGGTAAGGA+AGG | - | chr2_2:63094065-63094084 | None:intergenic | 45.0% | |
| !! | TAAAATAAAAATAAAAATTC+AGG | + | chr2_2:63092821-63092840 | Msa0263580:intron | 5.0% |
| GAAAGTGGAGGAGCGAGAAA+GGG | - | chr2_2:63089911-63089930 | None:intergenic | 50.0% | |
| AGAAAGTGGAGGAGCGAGAA+AGG | - | chr2_2:63089912-63089931 | None:intergenic | 50.0% | |
| !! | GAATTTGGTGTGAGGGTTCC+GGG | - | chr2_2:63089949-63089968 | None:intergenic | 50.0% |
| !! | CGGTGGTTGAATTTGGTGTG+AGG | - | chr2_2:63089957-63089976 | None:intergenic | 50.0% |
| ATGCCGGAAATTGTTACCGG+TGG | - | chr2_2:63089974-63089993 | None:intergenic | 50.0% | |
| CAAGAACCAGCTTCAAGAGC+TGG | + | chr2_2:63090069-63090088 | Msa0263580:CDS | 50.0% | |
| TTTAAACCTCGGCGCGTGAT+CGG | - | chr2_2:63090146-63090165 | None:intergenic | 50.0% | |
| CGGAGAGTTGAACAGTAGTG+AGG | - | chr2_2:63090205-63090224 | None:intergenic | 50.0% | |
| ATTGAGAGCAACTTCAGCGG+CGG | - | chr2_2:63090242-63090261 | None:intergenic | 50.0% | |
| CTCAATTCGCTTTCTCACCG+TGG | + | chr2_2:63090256-63090275 | Msa0263580:CDS | 50.0% | |
| GGAACTCACGAGGATCTTAG+CGG | - | chr2_2:63090299-63090318 | None:intergenic | 50.0% | |
| GAGAGAAAACGGAACTCACG+AGG | - | chr2_2:63090309-63090328 | None:intergenic | 50.0% | |
| ACTGTGCGTTCTGATGAACG+TGG | + | chr2_2:63090436-63090455 | Msa0263580:intron | 50.0% | |
| TACACAGTTTGAGTGGGGGA+TGG | + | chr2_2:63090787-63090806 | Msa0263580:intron | 50.0% | |
| TTTGAGTGGGGGATGGTGTT+TGG | + | chr2_2:63090794-63090813 | Msa0263580:intron | 50.0% | |
| AGCTAAGATGTGGGGAGTTG+CGG | + | chr2_2:63090929-63090948 | Msa0263580:intron | 50.0% | |
| AAATTGATATGCTGGGGCGC+AGG | - | chr2_2:63090962-63090981 | None:intergenic | 50.0% | |
| ACATGGCTAGGATACCCTCT+TGG | - | chr2_2:63091406-63091425 | None:intergenic | 50.0% | |
| !! | GAGGGTATCCTAGCCATGTA+TGG | + | chr2_2:63091407-63091426 | Msa0263580:intron | 50.0% |
| CTTTCATGGTGAGGGGATAC+AGG | + | chr2_2:63091661-63091680 | Msa0263580:intron | 50.0% | |
| AGGAATCTCGCACATGATGC+AGG | + | chr2_2:63091804-63091823 | Msa0263580:intron | 50.0% | |
| GGAATCTCGCACATGATGCA+GGG | + | chr2_2:63091805-63091824 | Msa0263580:intron | 50.0% | |
| GGGTCTGTCTGACCCATTAT+TGG | + | chr2_2:63091937-63091956 | Msa0263580:intron | 50.0% | |
| ! | CCATTTTACAACCGTCCCGA+GGG | + | chr2_2:63092877-63092896 | Msa0263580:intron | 50.0% |
| ! | CATTTTACAACCGTCCCGAG+GGG | + | chr2_2:63092878-63092897 | Msa0263580:intron | 50.0% |
| ! | AACACACTTGAGGCACTAGC+TGG | - | chr2_2:63092946-63092965 | None:intergenic | 50.0% |
| CGGTTCAGTTGAAGAGCTAG+CGG | - | chr2_2:63093210-63093229 | None:intergenic | 50.0% | |
| ! | CGCTAGCTCTTCAACTGAAC+CGG | + | chr2_2:63093208-63093227 | Msa0263580:CDS | 50.0% |
| AGGATCTTTGATGTGGTGGC+AGG | - | chr2_2:63093386-63093405 | None:intergenic | 50.0% | |
| CGACAAATGAGACCTTGCCA+TGG | + | chr2_2:63093608-63093627 | Msa0263580:CDS | 50.0% | |
| TTGCACCAGCAGTGTCTGTT+AGG | + | chr2_2:63093633-63093652 | Msa0263580:CDS | 50.0% | |
| ACAGTCCTAACAGACACTGC+TGG | - | chr2_2:63093641-63093660 | None:intergenic | 50.0% | |
| ATCTGATGCACTGAGGTAGG+TGG | - | chr2_2:63093695-63093714 | None:intergenic | 50.0% | |
| ACTGGAGGAGCAATTCGTAC+AGG | - | chr2_2:63093731-63093750 | None:intergenic | 50.0% | |
| ACAGCTTGCCGAATACTGAC+TGG | - | chr2_2:63093749-63093768 | None:intergenic | 50.0% | |
| GGAAGCTTATCTTGCTCGAC+AGG | - | chr2_2:63093848-63093867 | None:intergenic | 50.0% | |
| TGCAAAGTCTCTGGTTGTGG+TGG | - | chr2_2:63093911-63093930 | None:intergenic | 50.0% | |
| CTCTGCAAAGTCTCTGGTTG+TGG | - | chr2_2:63093914-63093933 | None:intergenic | 50.0% | |
| GGGGAAGTAGAGGAGAGTAG+TGG | - | chr2_2:63089882-63089901 | None:intergenic | 55.0% | |
| AGGGAAAGGAGGGGAAGTAG+AGG | - | chr2_2:63089892-63089911 | None:intergenic | 55.0% | |
| GAGCGAGAAAGGGAAAGGAG+GGG | - | chr2_2:63089901-63089920 | None:intergenic | 55.0% | |
| GGAGCGAGAAAGGGAAAGGA+GGG | - | chr2_2:63089902-63089921 | None:intergenic | 55.0% | |
| AGGAGCGAGAAAGGGAAAGG+AGG | - | chr2_2:63089903-63089922 | None:intergenic | 55.0% | |
| TGGAGGAGCGAGAAAGGGAA+AGG | - | chr2_2:63089906-63089925 | None:intergenic | 55.0% | |
| ATTTCCGGCATCACCGTCAC+CGG | + | chr2_2:63089983-63090002 | Msa0263580:CDS | 55.0% | |
| TGGTGGGAAATGGATCGGGT+CGG | - | chr2_2:63090017-63090036 | None:intergenic | 55.0% | |
| TTAAACCTCGGCGCGTGATC+GGG | - | chr2_2:63090145-63090164 | None:intergenic | 55.0% | |
| CGAGAGAGTGAGAAGGACCA+CGG | - | chr2_2:63090276-63090295 | None:intergenic | 55.0% | |
| TTAGCGGCGAGAGAGTGAGA+AGG | - | chr2_2:63090283-63090302 | None:intergenic | 55.0% | |
| TTGTGCGGGGGATTATGCTC+AGG | + | chr2_2:63090670-63090689 | Msa0263580:intron | 55.0% | |
| TGTGCGGGGGATTATGCTCA+GGG | + | chr2_2:63090671-63090690 | Msa0263580:intron | 55.0% | |
| ATGGTGAGGGGATACAGGGA+AGG | + | chr2_2:63091666-63091685 | Msa0263580:intron | 55.0% | |
| TGGTGAGGGGATACAGGGAA+GGG | + | chr2_2:63091667-63091686 | Msa0263580:intron | 55.0% | |
| AGGGGATACAGGGAAGGGTT+AGG | + | chr2_2:63091672-63091691 | Msa0263580:intron | 55.0% | |
| ACAACGTACAGATCGGGCCT+TGG | + | chr2_2:63092182-63092201 | Msa0263580:CDS | 55.0% | |
| !! | GCCATTTTACAACCGTCCCG+AGG | + | chr2_2:63092876-63092895 | Msa0263580:intron | 55.0% |
| CCCTCGGGACGGTTGTAAAA+TGG | - | chr2_2:63092880-63092899 | None:intergenic | 55.0% | |
| GAGTTCAAATCCCCTCGGGA+CGG | - | chr2_2:63092891-63092910 | None:intergenic | 55.0% | |
| GCCGATGAAGGTCTGTTTCG+AGG | - | chr2_2:63093434-63093453 | None:intergenic | 55.0% | |
| ! | GGACTTGTCACTGGTTGCTG+CGG | - | chr2_2:63093495-63093514 | None:intergenic | 55.0% |
| ACACTGCTGGTGCAATCCCA+TGG | - | chr2_2:63093628-63093647 | None:intergenic | 55.0% | |
| AGAGGTGGTGCAGAGAACAC+AGG | - | chr2_2:63093668-63093687 | None:intergenic | 55.0% | |
| !! | ACTGAGGTAGGTGGTGGAAG+AGG | - | chr2_2:63093686-63093705 | None:intergenic | 55.0% |
| TGATGCACTGAGGTAGGTGG+TGG | - | chr2_2:63093692-63093711 | None:intergenic | 55.0% | |
| GGAGGAGCAATTCGTACAGG+AGG | - | chr2_2:63093728-63093747 | None:intergenic | 55.0% | |
| ! | GCTTGCCGAATACTGACTGG+AGG | - | chr2_2:63093746-63093765 | None:intergenic | 55.0% |
| ! | AGTGGTGGGGCAGCAAATAC+AGG | - | chr2_2:63093773-63093792 | None:intergenic | 55.0% |
| ! | AGATCTTTTTGGACGGGGGC+AGG | - | chr2_2:63093809-63093828 | None:intergenic | 55.0% |
| !! | TTGCTCGACAGGGGTACTAC+TGG | - | chr2_2:63093837-63093856 | None:intergenic | 55.0% |
| ! | TTCTCCGGTGACGGTGATGC+CGG | - | chr2_2:63089990-63090009 | None:intergenic | 60.0% |
| GTCGGGTGATTCTCCGGTGA+CGG | - | chr2_2:63089999-63090018 | None:intergenic | 60.0% | |
| GATCGGGTCGGGTGATTCTC+CGG | - | chr2_2:63090005-63090024 | None:intergenic | 60.0% | |
| GGTGGGAAATGGATCGGGTC+GGG | - | chr2_2:63090016-63090035 | None:intergenic | 60.0% | |
| TCTGCGCCAGCTCTTGAAGC+TGG | - | chr2_2:63090078-63090097 | None:intergenic | 60.0% | |
| ! | CGGCGGAGTGTTCAGCTTGA+CGG | - | chr2_2:63090225-63090244 | None:intergenic | 60.0% |
| GGGTCAGACAGACCCATCAG+TGG | - | chr2_2:63091932-63091951 | None:intergenic | 60.0% | |
| ! | TTGTCACTGGTTGCTGCGGC+TGG | - | chr2_2:63093491-63093510 | None:intergenic | 60.0% |
| TGCAGGGAACCTCAGAGGAC+GGG | - | chr2_2:63093561-63093580 | None:intergenic | 60.0% | |
| CTGCAGGGAACCTCAGAGGA+CGG | - | chr2_2:63093562-63093581 | None:intergenic | 60.0% | |
| AAGGTGGTGCTCCTGCTGCA+GGG | - | chr2_2:63093577-63093596 | None:intergenic | 60.0% | |
| TAAGGTGGTGCTCCTGCTGC+AGG | - | chr2_2:63093578-63093597 | None:intergenic | 60.0% | |
| GCTGGTGCAATCCCATGGCA+AGG | - | chr2_2:63093623-63093642 | None:intergenic | 60.0% | |
| !! | GAGGTAGGTGGTGGAAGAGG+TGG | - | chr2_2:63093683-63093702 | None:intergenic | 60.0% |
| !! | TCGACAGGGGTACTACTGGC+AGG | - | chr2_2:63093833-63093852 | None:intergenic | 60.0% |
| ! | TCACTGGTTGCTGCGGCTGG+CGG | - | chr2_2:63093488-63093507 | None:intergenic | 65.0% |
| ACCTCAGAGGACGGGTCACC+CGG | - | chr2_2:63093553-63093572 | None:intergenic | 65.0% | |
| CCTGCTGCAGGGAACCTCAG+AGG | - | chr2_2:63093566-63093585 | None:intergenic | 65.0% | |
| !! | CCTCTGAGGTTCCCTGCAGC+AGG | + | chr2_2:63093563-63093582 | Msa0263580:CDS | 65.0% |
| AAGGTCCCGATCACGCGCCG+AGG | + | chr2_2:63090137-63090156 | Msa0263580:CDS | 70.0% | |
| ! | GCTGGCGGATGCCTGCTTCG+AGG | - | chr2_2:63093473-63093492 | None:intergenic | 70.0% |
| GCCGGGTGACCCGTCCTCTG+AGG | + | chr2_2:63093549-63093568 | Msa0263580:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 63089836 | 63094327 | 63089836 | ID=Msa0263580;Name=Msa0263580 |
| chr2_2 | mRNA | 63089836 | 63094327 | 63089836 | ID=Msa0263580-mRNA-1;Parent=Msa0263580;Name=Msa0263580-mRNA-1;_AED=0.00;_eAED=0.00;_QI=15|1|1|1|1|1|3|372|479 |
| chr2_2 | exon | 63089836 | 63090309 | 63089836 | ID=Msa0263580-mRNA-1:exon:19554;Parent=Msa0263580-mRNA-1 |
| chr2_2 | exon | 63092110 | 63092329 | 63092110 | ID=Msa0263580-mRNA-1:exon:19555;Parent=Msa0263580-mRNA-1 |
| chr2_2 | exon | 63093195 | 63094327 | 63093195 | ID=Msa0263580-mRNA-1:exon:19556;Parent=Msa0263580-mRNA-1 |
| chr2_2 | five_prime_UTR | 63089836 | 63089850 | 63089836 | ID=Msa0263580-mRNA-1:five_prime_utr;Parent=Msa0263580-mRNA-1 |
| chr2_2 | CDS | 63089851 | 63090309 | 63089851 | ID=Msa0263580-mRNA-1:cds;Parent=Msa0263580-mRNA-1 |
| chr2_2 | CDS | 63092110 | 63092329 | 63092110 | ID=Msa0263580-mRNA-1:cds;Parent=Msa0263580-mRNA-1 |
| chr2_2 | CDS | 63093195 | 63093955 | 63093195 | ID=Msa0263580-mRNA-1:cds;Parent=Msa0263580-mRNA-1 |
| chr2_2 | three_prime_UTR | 63093956 | 63094327 | 63093956 | ID=Msa0263580-mRNA-1:three_prime_utr;Parent=Msa0263580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
