Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0338730 | XP_003597250.1 | 99.265 | 408 | 3 | 0 | 1 | 408 | 1 | 408 | 0.0 | 820 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0338730 | sp|Q9SKN2|DRB2_ARATH | 69.786 | 374 | 76 | 12 | 1 | 356 | 1 | 355 | 8.02e-164 | 470 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0042550 | Msa0338730 | -0.803332 | 3.666690e-49 | -8.615850e-47 |
| Msa0178510 | Msa0338730 | -0.807025 | 6.182135e-50 | -8.615850e-47 |
| Msa0183010 | Msa0338730 | 0.801204 | 1.005627e-48 | -8.615850e-47 |
| Msa0263580 | Msa0338730 | 0.912644 | 1.537771e-83 | -8.615850e-47 |
| Msa0306210 | Msa0338730 | 0.804667 | 1.935143e-49 | -8.615850e-47 |
| Msa0311470 | Msa0338730 | -0.818413 | 1.986099e-52 | -8.615850e-47 |
| Msa0319170 | Msa0338730 | -0.803831 | 2.889059e-49 | -8.615850e-47 |
| Msa0338730 | Msa0381620 | 0.816468 | 5.444694e-52 | -8.615850e-47 |
| Msa0338730 | Msa0422180 | -0.830228 | 3.305578e-55 | -8.615850e-47 |
| Msa0338730 | Msa0525610 | -0.810681 | 1.021566e-50 | -8.615850e-47 |
| Msa0338730 | Msa0572480 | -0.814172 | 1.763739e-51 | -8.615850e-47 |
| Msa0338730 | Msa0800770 | -0.801450 | 8.951433e-49 | -8.615850e-47 |
| Msa0338730 | Msa0820850 | -0.810390 | 1.180765e-50 | -8.615850e-47 |
| Msa0338730 | Msa0838930 | -0.801064 | 1.074059e-48 | -8.615850e-47 |
| Msa0338730 | Msa0861130 | -0.802768 | 4.796176e-49 | -8.615850e-47 |
| Msa0338730 | Msa0864470 | 0.817353 | 3.445829e-52 | -8.615850e-47 |
| Msa0338730 | Msa0902830 | -0.809788 | 1.591343e-50 | -8.615850e-47 |
| Msa0338730 | Msa1077340 | -0.826797 | 2.227301e-54 | -8.615850e-47 |
| Msa0338730 | Msa1115280 | -0.825139 | 5.517982e-54 | -8.615850e-47 |
| Msa0338730 | Msa1143020 | -0.827740 | 1.323709e-54 | -8.615850e-47 |
| Msa0338730 | Msa1163590 | 0.808064 | 3.721375e-50 | -8.615850e-47 |
| Msa0338730 | Msa1186950 | 0.803641 | 3.164583e-49 | -8.615850e-47 |
| Msa0338730 | Msa1205390 | -0.801415 | 9.101629e-49 | -8.615850e-47 |
| Msa0338730 | Msa1224580 | 0.815167 | 1.061937e-51 | -8.615850e-47 |
| Msa0338730 | Msa1257800 | 0.800746 | 1.246969e-48 | -8.615850e-47 |
| Msa0338730 | Msa1263290 | 0.819676 | 1.024887e-52 | -8.615850e-47 |
| Msa0338730 | Msa1270730 | -0.812270 | 4.614155e-51 | -8.615850e-47 |
| Msa0338730 | Msa1297310 | -0.809808 | 1.575541e-50 | -8.615850e-47 |
| Msa0338730 | Msa1372150 | -0.811506 | 6.766200e-51 | -8.615850e-47 |
| Msa0338730 | Msa1376160 | 0.801675 | 8.052522e-49 | -8.615850e-47 |
| Msa0338730 | Msa1379850 | -0.801015 | 1.099181e-48 | -8.615850e-47 |
| Msa0338730 | Msa1385020 | -0.806182 | 9.312960e-50 | -8.615850e-47 |
| Msa0338730 | Msa1404240 | 0.802662 | 5.044138e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0338730 | MtrunA17_Chr2g0326721 | 99.265 | 408 | 3 | 0 | 1 | 408 | 1 | 408 | 0.0 | 820 |
| Msa0338730 | MtrunA17_Chr4g0029001 | 74.937 | 395 | 73 | 8 | 1 | 387 | 1 | 377 | 0.0 | 557 |
| Msa0338730 | MtrunA17_Chr7g0273611 | 73.248 | 157 | 42 | 0 | 1 | 157 | 1 | 157 | 1.32e-79 | 254 |
| Msa0338730 | MtrunA17_Chr6g0461131 | 45.783 | 166 | 78 | 3 | 1 | 163 | 158 | 314 | 4.59e-34 | 132 |
| Msa0338730 | MtrunA17_Chr6g0456181 | 50.000 | 122 | 54 | 1 | 32 | 153 | 2 | 116 | 3.97e-25 | 99.4 |
| Msa0338730 | MtrunA17_Chr3g0132821 | 36.842 | 152 | 94 | 1 | 1 | 150 | 16 | 167 | 1.10e-21 | 97.4 |
| Msa0338730 | MtrunA17_Chr3g0118941 | 35.714 | 154 | 86 | 2 | 7 | 160 | 113 | 253 | 1.06e-19 | 90.1 |
| Msa0338730 | MtrunA17_Chr3g0118921 | 35.256 | 156 | 92 | 3 | 3 | 158 | 50 | 196 | 8.15e-18 | 83.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0338730 | AT2G28380.1 | 69.786 | 374 | 76 | 12 | 1 | 356 | 1 | 355 | 8.15e-165 | 470 |
| Msa0338730 | AT5G41070.1 | 47.578 | 351 | 128 | 6 | 1 | 317 | 1 | 329 | 1.34e-92 | 284 |
| Msa0338730 | AT3G26932.1 | 68.254 | 189 | 54 | 1 | 1 | 189 | 1 | 183 | 7.54e-87 | 268 |
| Msa0338730 | AT3G26932.2 | 68.254 | 189 | 54 | 1 | 1 | 189 | 1 | 183 | 7.54e-87 | 268 |
| Msa0338730 | AT3G62800.3 | 44.767 | 172 | 87 | 1 | 1 | 172 | 4 | 167 | 5.47e-34 | 129 |
| Msa0338730 | AT3G62800.2 | 44.767 | 172 | 87 | 1 | 1 | 172 | 4 | 167 | 5.90e-34 | 130 |
| Msa0338730 | AT3G62800.1 | 44.767 | 172 | 87 | 1 | 1 | 172 | 4 | 167 | 5.90e-34 | 130 |
| Msa0338730 | AT3G26932.3 | 55.140 | 107 | 42 | 1 | 83 | 189 | 25 | 125 | 6.04e-30 | 117 |
| Msa0338730 | AT1G09700.2 | 36.129 | 155 | 98 | 1 | 1 | 154 | 15 | 169 | 1.58e-21 | 94.0 |
| Msa0338730 | AT1G09700.1 | 35.849 | 159 | 101 | 1 | 1 | 158 | 15 | 173 | 6.88e-21 | 94.4 |
Find 155 sgRNAs with CRISPR-Local
Find 354 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAGTAATTAGTCATTTC+TGG | 0.142298 | 2_4:-59180692 | None:intergenic |
| TTGAATTTAACAGGACAAAA+TGG | 0.174733 | 2_4:-59184888 | None:intergenic |
| CGGTGGTTGAATTTGGTGTT+AGG | 0.215375 | 2_4:-59180802 | None:intergenic |
| CAACCACCGGTAACAATTTC+CGG | 0.241648 | 2_4:+59180816 | Msa0338730:five_prime_UTR |
| ACCAGAGACTTTGCAGAGTT+TGG | 0.262718 | 2_4:+59184731 | Msa0338730:CDS |
| CGCCAACCCTTGAATTTAAC+AGG | 0.273315 | 2_4:-59184897 | None:intergenic |
| ATCATGCTCACATGCTTAAA+AGG | 0.285552 | 2_4:-59185023 | None:intergenic |
| TGAATTTGGTGTTAGGGTTC+CGG | 0.293450 | 2_4:-59180795 | None:intergenic |
| TGTTTCGAGGTCCTGTCTTT+TGG | 0.298459 | 2_4:-59184233 | None:intergenic |
| GGCTTTCTATTGCAGAAGAT+TGG | 0.305499 | 2_4:-59184344 | None:intergenic |
| ATCTGAAACTTCTTCTGAAA+TGG | 0.305888 | 2_4:-59184144 | None:intergenic |
| AGTTTCAGATTCAAAATATC+AGG | 0.307882 | 2_4:+59184157 | Msa0338730:CDS |
| TTGTTACCGGTGGTTGAATT+TGG | 0.308057 | 2_4:-59180809 | None:intergenic |
| TTGGCTGGAATCACATTTAC+TGG | 0.324826 | 2_4:+59183048 | Msa0338730:CDS |
| AGAAAGTGGAGGAGAGAGAA+AGG | 0.327117 | 2_4:-59180757 | None:intergenic |
| GCTTTCTATTGCAGAAGATT+GGG | 0.336341 | 2_4:-59184343 | None:intergenic |
| TGAAATGGAATCCGAGCATT+TGG | 0.336559 | 2_4:-59184129 | None:intergenic |
| CTGTAAAATTCAAAGCAGTT+TGG | 0.340927 | 2_4:+59184949 | Msa0338730:three_prime_UTR |
| AAAGCTACCGTTAACTTTAA+CGG | 0.347115 | 2_4:+59181015 | Msa0338730:CDS |
| TTCTCTCTCTAACTTCTTCC+CGG | 0.356807 | 2_4:+59180776 | Msa0338730:five_prime_UTR |
| AGATTGGGGCTGCTGCAAAA+TGG | 0.358836 | 2_4:-59184328 | None:intergenic |
| TTGTCACTGGTTGCTGCGGC+TGG | 0.366524 | 2_4:-59184303 | None:intergenic |
| TTGCACCTGCAGTGTCTGTT+AGG | 0.384524 | 2_4:+59184448 | Msa0338730:CDS |
| TGAATTTAACAGGACAAAAT+GGG | 0.386934 | 2_4:-59184887 | None:intergenic |
| GAATTTGGTGTTAGGGTTCC+GGG | 0.390827 | 2_4:-59180794 | None:intergenic |
| AATCAATCAATGGTGGGAAA+TGG | 0.396289 | 2_4:-59180872 | None:intergenic |
| CAAGGTCTCATTTGTCGAAT+AGG | 0.402182 | 2_4:-59184417 | None:intergenic |
| AATGGGGTAAGGAAGGAAAA+AGG | 0.405084 | 2_4:-59184870 | None:intergenic |
| CGCTAGCTCTTCAACTGAAC+CGG | 0.405610 | 2_4:+59184023 | Msa0338730:CDS |
| TTGCTCCTCCAGTCAGTATT+CGG | 0.408942 | 2_4:+59184553 | Msa0338730:CDS |
| GATCTCGCCGTTAAAGTTAA+CGG | 0.411163 | 2_4:-59181022 | None:intergenic |
| CCTCAGTGCATCAGATAATA+CGG | 0.415313 | 2_4:+59184514 | Msa0338730:CDS |
| AAGAAATTGCACAGCGAGTA+GGG | 0.416098 | 2_4:+59182953 | Msa0338730:CDS |
| ACCTCAGAGGACGGGTCACC+CGG | 0.421213 | 2_4:-59184365 | None:intergenic |
| GATCGGATCGGGTGATTCTC+CGG | 0.422184 | 2_4:-59180850 | None:intergenic |
| AAGAGTAATTAGTCATTTCT+GGG | 0.423739 | 2_4:-59180691 | None:intergenic |
| TCTGCGCCAGCTCTTGAAGC+TGG | 0.436751 | 2_4:-59180927 | None:intergenic |
| CCTCTGAGGTTCCCTGCAGC+AGG | 0.441013 | 2_4:+59184378 | Msa0338730:CDS |
| TAAGGTGGTGCTCCTGCTGC+AGG | 0.441480 | 2_4:-59184390 | None:intergenic |
| GGTGGGAAATGGATCGGATC+GGG | 0.443681 | 2_4:-59180861 | None:intergenic |
| TTAAACCTCGGCGCGTGATC+GGG | 0.445389 | 2_4:-59180994 | None:intergenic |
| GGAAGCTTATCTTGCTCGAC+AGG | 0.445903 | 2_4:-59184660 | None:intergenic |
| TCATTTGCTGTTGCCGATGA+AGG | 0.446888 | 2_4:-59184258 | None:intergenic |
| TCCAAACTCTGCAAAGTCTC+TGG | 0.454293 | 2_4:-59184732 | None:intergenic |
| TGCCCCACGTGAATGTGAAC+CGG | 0.455130 | 2_4:+59185119 | Msa0338730:three_prime_UTR |
| AGTGGTGGGGCAGCAAATAC+AGG | 0.457509 | 2_4:-59184585 | None:intergenic |
| GAAAGTGGAGGAGAGAGAAA+GGG | 0.459340 | 2_4:-59180756 | None:intergenic |
| AAGAAGTTAGAGAGAGAAAG+TGG | 0.460853 | 2_4:-59180771 | None:intergenic |
| GAGAAGGACCACGGTGAGAA+AGG | 0.462755 | 2_4:-59181116 | None:intergenic |
| CAAGAAATTGCACAGCGAGT+AGG | 0.464337 | 2_4:+59182952 | Msa0338730:CDS |
| TCTAATTCGTCATTGTTCTC+CGG | 0.472629 | 2_4:-59184042 | None:intergenic |
| TGGAGGAGAGAGAAAGGGAG+AGG | 0.477104 | 2_4:-59180751 | None:intergenic |
| GCCGATGAAGGTCTGTTTCG+AGG | 0.478765 | 2_4:-59184246 | None:intergenic |
| TTCTCCGGTGACGGTGATGC+CGG | 0.481805 | 2_4:-59180835 | None:intergenic |
| GCTTGTTTCTTATTCTTCGC+AGG | 0.484965 | 2_4:-59183075 | None:intergenic |
| GTGATGCCGGAAATTGTTAC+CGG | 0.488042 | 2_4:-59180822 | None:intergenic |
| GGGAGAGGAGAGAGAAGTAG+AGG | 0.488428 | 2_4:-59180736 | None:intergenic |
| CTCTGCAAAGTCTCTGGTTG+TGG | 0.489504 | 2_4:-59184726 | None:intergenic |
| GGTGGTTGAATTTGGTGTTA+GGG | 0.490488 | 2_4:-59180801 | None:intergenic |
| CCTCTAATTTGCCAAAAGAC+AGG | 0.495216 | 2_4:+59184222 | Msa0338730:CDS |
| CTGCAAAATGGACTTGTCAC+TGG | 0.496063 | 2_4:-59184316 | None:intergenic |
| CGGCGGAGTGTTCAGCTTGA+CGG | 0.499665 | 2_4:-59181074 | None:intergenic |
| TTGCTCGACAGGGGTACTAC+TGG | 0.502654 | 2_4:-59184649 | None:intergenic |
| TCACTGGTTGCTGCGGCTGG+CGG | 0.503236 | 2_4:-59184300 | None:intergenic |
| ATCTTCTGCAATAGAAAGCC+GGG | 0.504977 | 2_4:+59184347 | Msa0338730:CDS |
| TCCAGCTAAAATTCTTGAGA+TGG | 0.505790 | 2_4:+59184680 | Msa0338730:CDS |
| ACCTCGAAACAGACCTTCAT+CGG | 0.505989 | 2_4:+59184245 | Msa0338730:CDS |
| CTTTCTATTGCAGAAGATTG+GGG | 0.507692 | 2_4:-59184342 | None:intergenic |
| ATTTGTCGAATAGGAACATA+AGG | 0.510920 | 2_4:-59184408 | None:intergenic |
| AGGATCTTTGATGTGGTGGC+AGG | 0.510989 | 2_4:-59184198 | None:intergenic |
| AGAAGGACCACGGTGAGAAA+GGG | 0.512115 | 2_4:-59181115 | None:intergenic |
| GTCCTGTTAAATTCAAGGGT+TGG | 0.512138 | 2_4:+59184895 | Msa0338730:three_prime_UTR |
| GCTGGCGGATGCCTGCTTCG+AGG | 0.514564 | 2_4:-59184285 | None:intergenic |
| TTTAAACCTCGGCGCGTGAT+CGG | 0.523259 | 2_4:-59180995 | None:intergenic |
| AATTTGAAATTTATTTGAGT+CGG | 0.527034 | 2_4:+59184764 | Msa0338730:exon |
| TGCAGGGAACCTCAGAGGAC+GGG | 0.531360 | 2_4:-59184373 | None:intergenic |
| ACTGGGATAGTAGAATTGGC+TGG | 0.532365 | 2_4:+59183033 | Msa0338730:CDS |
| CAAGAACCAGCTTCAAGAGC+TGG | 0.532768 | 2_4:+59180921 | Msa0338730:CDS |
| CTGCAGGGAACCTCAGAGGA+CGG | 0.535825 | 2_4:-59184374 | None:intergenic |
| GTGGAGCATTTACTAATCAC+AGG | 0.536504 | 2_4:-59185068 | None:intergenic |
| TAACAGGACAAAATGGGGTA+AGG | 0.537009 | 2_4:-59184881 | None:intergenic |
| CAGTACACAACGTACAGATC+GGG | 0.538706 | 2_4:+59182988 | Msa0338730:CDS |
| AATCTTCTGCAATAGAAAGC+CGG | 0.539245 | 2_4:+59184346 | Msa0338730:CDS |
| CAAATGAAAATCCTCGAAGC+AGG | 0.540229 | 2_4:+59184274 | Msa0338730:CDS |
| CTCAGTGCATCAGATAATAC+GGG | 0.541912 | 2_4:+59184515 | Msa0338730:CDS |
| ATCGGGTGATTCTCCGGTGA+CGG | 0.542131 | 2_4:-59180844 | None:intergenic |
| GCTGTGCAATTTCTTGCAAG+AGG | 0.545798 | 2_4:-59182945 | None:intergenic |
| TAGAGAATACAATCAATCAA+TGG | 0.546650 | 2_4:-59180882 | None:intergenic |
| ACAACGTACAGATCGGGCCT+TGG | 0.550437 | 2_4:+59182994 | Msa0338730:CDS |
| TGATTGTATTCTCTAGAGAT+CGG | 0.551121 | 2_4:+59180890 | Msa0338730:five_prime_UTR |
| AGGACAAAATGGGGTAAGGA+AGG | 0.552845 | 2_4:-59184877 | None:intergenic |
| AGAGAAGTAGAGGAGAGTAG+TGG | 0.555115 | 2_4:-59180726 | None:intergenic |
| ATTTCCGGCATCACCGTCAC+CGG | 0.558328 | 2_4:+59180831 | Msa0338730:five_prime_UTR |
| AGGAAGGATCTTTGATGTGG+TGG | 0.559325 | 2_4:-59184202 | None:intergenic |
| TGCAAAGTCTCTGGTTGTGG+TGG | 0.559460 | 2_4:-59184723 | None:intergenic |
| TCAGTACACAACGTACAGAT+CGG | 0.563575 | 2_4:+59182987 | Msa0338730:CDS |
| ATCAATGGTGGGAAATGGAT+CGG | 0.566276 | 2_4:-59180867 | None:intergenic |
| AGAATACAATCAATCAATGG+TGG | 0.573350 | 2_4:-59180879 | None:intergenic |
| TACGTTGTGTACTGAGGCAA+TGG | 0.574585 | 2_4:-59182979 | None:intergenic |
| ACAGCTTGCCGAATACTGAC+TGG | 0.577074 | 2_4:-59184561 | None:intergenic |
| GAAACTCACGAGGATCTTAG+CGG | 0.578014 | 2_4:-59181148 | None:intergenic |
| AAAATGCAGCTATGGCAGCT+TGG | 0.578374 | 2_4:+59183103 | Msa0338730:CDS |
| GCAGGAGATTGAGAACTAGT+TGG | 0.580017 | 2_4:-59184180 | None:intergenic |
| AGAATAGCAATACACAATTG+TGG | 0.580140 | 2_4:-59185087 | None:intergenic |
| TCCTACACTTGCATTCGTGA+AGG | 0.580295 | 2_4:+59180970 | Msa0338730:CDS |
| ACTGAGGTAGGTGGTGGAAG+AGG | 0.580987 | 2_4:-59184498 | None:intergenic |
| GACAAATGAGACCTTGCCAT+GGG | 0.590266 | 2_4:+59184424 | Msa0338730:CDS |
| GAGGTAGGTGGTGGAAGAGG+TGG | 0.590298 | 2_4:-59184495 | None:intergenic |
| TGGTGGGAAATGGATCGGAT+CGG | 0.592344 | 2_4:-59180862 | None:intergenic |
| CAATGTCTAATCCAAATGCT+CGG | 0.593335 | 2_4:+59184118 | Msa0338730:CDS |
| ATTATCTGATGCACTGAGGT+AGG | 0.594850 | 2_4:-59184510 | None:intergenic |
| ACTGGAGGAGCAATTCGTAC+AGG | 0.597845 | 2_4:-59184543 | None:intergenic |
| CTCAATTCCCTTTCTCACCG+TGG | 0.605450 | 2_4:+59181108 | Msa0338730:CDS |
| GAATACAATCAATCAATGGT+GGG | 0.605838 | 2_4:-59180878 | None:intergenic |
| ACACTGCAGGTGCAATCCCA+TGG | 0.610621 | 2_4:-59184440 | None:intergenic |
| TGATGCACTGAGGTAGGTGG+TGG | 0.611177 | 2_4:-59184504 | None:intergenic |
| TTTACTGAACTACCGTCTGA+AGG | 0.612047 | 2_4:+59184086 | Msa0338730:CDS |
| TCGACAGGGGTACTACTGGC+AGG | 0.615177 | 2_4:-59184645 | None:intergenic |
| TAGAGGAAGGATCTTTGATG+TGG | 0.615207 | 2_4:-59184205 | None:intergenic |
| GAATTTAACAGGACAAAATG+GGG | 0.615663 | 2_4:-59184886 | None:intergenic |
| TAGAACAGATCACTATAGCA+CGG | 0.616686 | 2_4:+59184061 | Msa0338730:CDS |
| TTAACGGTAGCTTTAAACCT+CGG | 0.616986 | 2_4:-59181006 | None:intergenic |
| AAGGTGGTGCTCCTGCTGCA+GGG | 0.618206 | 2_4:-59184389 | None:intergenic |
| TCACGAATGCAAGTGTAGGA+AGG | 0.620807 | 2_4:-59180967 | None:intergenic |
| AGAACAGATCACTATAGCAC+GGG | 0.620906 | 2_4:+59184062 | Msa0338730:CDS |
| CTAACACCAAATTCAACCAC+CGG | 0.623233 | 2_4:+59180803 | Msa0338730:five_prime_UTR |
| CCTGCTGCAGGGAACCTCAG+AGG | 0.623949 | 2_4:-59184378 | None:intergenic |
| CAGGCCGGTTCACATTCACG+TGG | 0.628081 | 2_4:-59185123 | None:intergenic |
| GCAGGTGCAATCCCATGGCA+AGG | 0.628100 | 2_4:-59184435 | None:intergenic |
| GCCGGGTGACCCGTCCTCTG+AGG | 0.629007 | 2_4:+59184364 | Msa0338730:CDS |
| CGGTTCAGTTGAAGAGCTAG+CGG | 0.631534 | 2_4:-59184022 | None:intergenic |
| ATGCCGGAAATTGTTACCGG+TGG | 0.632060 | 2_4:-59180819 | None:intergenic |
| AGAAATTGCACAGCGAGTAG+GGG | 0.632106 | 2_4:+59182954 | Msa0338730:CDS |
| CGACAAATGAGACCTTGCCA+TGG | 0.640308 | 2_4:+59184423 | Msa0338730:CDS |
| AAGTTAGAGAGAGAAAGTGG+AGG | 0.641931 | 2_4:-59180768 | None:intergenic |
| GAAGCTTATCTTGCTCGACA+GGG | 0.645204 | 2_4:-59184659 | None:intergenic |
| AAGGTCCCGATCACGCGCCG+AGG | 0.646470 | 2_4:+59180989 | Msa0338730:CDS |
| GGACTTGTCACTGGTTGCTG+CGG | 0.650772 | 2_4:-59184307 | None:intergenic |
| GGAGGAGCAATTCGTACAGG+AGG | 0.651525 | 2_4:-59184540 | None:intergenic |
| ACAGTCCTAACAGACACTGC+AGG | 0.653713 | 2_4:-59184453 | None:intergenic |
| GGCCGGTTCACATTCACGTG+GGG | 0.656154 | 2_4:-59185121 | None:intergenic |
| AGGCCGGTTCACATTCACGT+GGG | 0.656789 | 2_4:-59185122 | None:intergenic |
| TTAGCGGCGAGAGAGTGAGA+AGG | 0.659407 | 2_4:-59181132 | None:intergenic |
| AGAGGTGGTGCAGAGAACAC+AGG | 0.669848 | 2_4:-59184480 | None:intergenic |
| ATTGAGAGCAACTTCAGCGG+CGG | 0.670080 | 2_4:-59181091 | None:intergenic |
| GGAATTGAGAGCAACTTCAG+CGG | 0.671022 | 2_4:-59181094 | None:intergenic |
| ACCTTCACGAATGCAAGTGT+AGG | 0.678200 | 2_4:-59180971 | None:intergenic |
| TGTCGAATAGGAACATAAGG+TGG | 0.683320 | 2_4:-59184405 | None:intergenic |
| ATCTGATGCACTGAGGTAGG+TGG | 0.685042 | 2_4:-59184507 | None:intergenic |
| CGGAGAGTTGAACAGTAGTG+AGG | 0.687248 | 2_4:-59181054 | None:intergenic |
| CGAGAGAGTGAGAAGGACCA+CGG | 0.688054 | 2_4:-59181125 | None:intergenic |
| AAGCTTATCTTGCTCGACAG+GGG | 0.688854 | 2_4:-59184658 | None:intergenic |
| GCTTGCCGAATACTGACTGG+AGG | 0.696387 | 2_4:-59184558 | None:intergenic |
| GATCTGTACGTTGTGTACTG+AGG | 0.708993 | 2_4:-59182985 | None:intergenic |
| CCGTATTATCTGATGCACTG+AGG | 0.717181 | 2_4:-59184514 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTTAATTTTAAAGTAAAA+AGG | - | chr2_4:59181915-59181934 | None:intergenic | 10.0% |
| !!! | AAAAATATTTTTTATTGACA+TGG | - | chr2_4:59182255-59182274 | None:intergenic | 10.0% |
| !! | AAAAAAAAAGATTGAATTTG+AGG | - | chr2_4:59181679-59181698 | None:intergenic | 15.0% |
| !!! | TTTTGTTTTCAAATAACTTT+TGG | - | chr2_4:59182132-59182151 | None:intergenic | 15.0% |
| !!! | CTTTTGATTTGAATATATAT+TGG | - | chr2_4:59182697-59182716 | None:intergenic | 15.0% |
| !! | ATATAAAAACATATTAGCAA+TGG | - | chr2_4:59182829-59182848 | None:intergenic | 15.0% |
| !! | ATAAAAATAAAAATTCAGGA+AGG | + | chr2_4:59183640-59183659 | Msa0338730:intron | 15.0% |
| !!! | AATTTGAAATTTATTTGAGT+CGG | + | chr2_4:59184764-59184783 | Msa0338730:exon | 15.0% |
| !! | GAATTTGAGGATTAATATAA+TGG | - | chr2_4:59181666-59181685 | None:intergenic | 20.0% |
| !! | AAAGACTATATATCTGTAAT+GGG | - | chr2_4:59182513-59182532 | None:intergenic | 20.0% |
| !! | AATATATATTGGATACTTGA+AGG | - | chr2_4:59182686-59182705 | None:intergenic | 20.0% |
| !! | CCTAAAATAAATCCAATAAT+GGG | - | chr2_4:59182764-59182783 | None:intergenic | 20.0% |
| !!! | TGAAAAATTAGTTACTTTCA+TGG | + | chr2_4:59183167-59183186 | Msa0338730:intron | 20.0% |
| !!! | GAAAAATTAGTTACTTTCAT+GGG | + | chr2_4:59183168-59183187 | Msa0338730:intron | 20.0% |
| !! | TAAACAAATGTGAAAAATCA+GGG | - | chr2_4:59183270-59183289 | None:intergenic | 20.0% |
| !! | AAATTTATCTTATGGTATTG+TGG | + | chr2_4:59183326-59183345 | Msa0338730:intron | 20.0% |
| !! | AAGTTGGAATAAAAATATGT+AGG | - | chr2_4:59183476-59183495 | None:intergenic | 20.0% |
| !! | TTATAATATCACGTCTTTAA+AGG | - | chr2_4:59183503-59183522 | None:intergenic | 20.0% |
| !!! | ATTTTTTATTTCCCTTGTTT+AGG | + | chr2_4:59183599-59183618 | Msa0338730:intron | 20.0% |
| !! | AACTTGGAATAAAAATACTT+AGG | - | chr2_4:59183825-59183844 | None:intergenic | 20.0% |
| !! | ATTGTTCAATGAATTAAACT+TGG | - | chr2_4:59183841-59183860 | None:intergenic | 20.0% |
| !!! | AATTTTACATCACTTGTTAT+AGG | - | chr2_4:59184843-59184862 | None:intergenic | 20.0% |
| ! | AAGAGTAATTAGTCATTTCT+GGG | - | chr2_4:59180694-59180713 | None:intergenic | 25.0% |
| ! | AAAGAGTAATTAGTCATTTC+TGG | - | chr2_4:59180695-59180714 | None:intergenic | 25.0% |
| ! | TAGAGAATACAATCAATCAA+TGG | - | chr2_4:59180885-59180904 | None:intergenic | 25.0% |
| !! | ACTATCAATGTTACTTAGAA+TGG | + | chr2_4:59181354-59181373 | Msa0338730:intron | 25.0% |
| !!! | ACACTTTTGCTATATACAAA+CGG | - | chr2_4:59181528-59181547 | None:intergenic | 25.0% |
| ! | CAAACTGTGTACTTAAAAAA+CGG | - | chr2_4:59181591-59181610 | None:intergenic | 25.0% |
| !!! | TATAATGGACCACTTAAAAA+CGG | - | chr2_4:59181651-59181670 | None:intergenic | 25.0% |
| ! | ATATACATTAGACATTGTGT+TGG | - | chr2_4:59181997-59182016 | None:intergenic | 25.0% |
| ! | AATTCAATTTCAACCATTCA+TGG | + | chr2_4:59182083-59182102 | Msa0338730:intron | 25.0% |
| ! | ATTTACCAATACTCAACTAT+GGG | - | chr2_4:59182195-59182214 | None:intergenic | 25.0% |
| ! | AATTTACCAATACTCAACTA+TGG | - | chr2_4:59182196-59182215 | None:intergenic | 25.0% |
| ! | TCATTAGCAACAACAATTAA+CGG | - | chr2_4:59182425-59182444 | None:intergenic | 25.0% |
| ! | CAAAGACTATATATCTGTAA+TGG | - | chr2_4:59182514-59182533 | None:intergenic | 25.0% |
| !! | ATATTCCACTTTAGAAGATA+AGG | - | chr2_4:59182597-59182616 | None:intergenic | 25.0% |
| ! | ATAATTCATACTGCATACAT+AGG | - | chr2_4:59182659-59182678 | None:intergenic | 25.0% |
| !!! | CCCATTATTGGATTTATTTT+AGG | + | chr2_4:59182761-59182780 | Msa0338730:intron | 25.0% |
| ! | GCCTAAAATAAATCCAATAA+TGG | - | chr2_4:59182765-59182784 | None:intergenic | 25.0% |
| !! | AAAAGAACACATTTAGAACA+AGG | - | chr2_4:59182790-59182809 | None:intergenic | 25.0% |
| !! | GTTTTTATATCAACACTGAT+TGG | + | chr2_4:59182839-59182858 | Msa0338730:intron | 25.0% |
| !!! | GTCTTTAAAACAATGTAAGT+GGG | + | chr2_4:59183128-59183147 | Msa0338730:intron | 25.0% |
| ! | CTAAACAAATGTGAAAAATC+AGG | - | chr2_4:59183271-59183290 | None:intergenic | 25.0% |
| !! | CTGATTTTTCACATTTGTTT+AGG | + | chr2_4:59183269-59183288 | Msa0338730:intron | 25.0% |
| ! | TGGCTGAAAAATTTATCTTA+TGG | + | chr2_4:59183318-59183337 | Msa0338730:intron | 25.0% |
| ! | TCCATAATTTATTTGTCTTC+AGG | + | chr2_4:59183406-59183425 | Msa0338730:intron | 25.0% |
| ! | CCATAATTTATTTGTCTTCA+GGG | + | chr2_4:59183407-59183426 | Msa0338730:intron | 25.0% |
| ! | AGAGACAGAAAATGATAAAA+TGG | - | chr2_4:59183570-59183589 | None:intergenic | 25.0% |
| !! | TTTTATCATTTTCTGTCTCT+CGG | + | chr2_4:59183570-59183589 | Msa0338730:intron | 25.0% |
| ! | AAAATAAAAATTCAGGAAGG+AGG | + | chr2_4:59183643-59183662 | Msa0338730:intron | 25.0% |
| ! | AAATAAAAATTCAGGAAGGA+GGG | + | chr2_4:59183644-59183663 | Msa0338730:intron | 25.0% |
| ! | GACAAATGTAACAAACTATA+TGG | - | chr2_4:59183883-59183902 | None:intergenic | 25.0% |
| ! | TTTATTTCCCTTGTAAAGAA+TGG | + | chr2_4:59183949-59183968 | Msa0338730:intron | 25.0% |
| !!! | ATAATTTCCTTTTTCATCAG+TGG | + | chr2_4:59183990-59184009 | Msa0338730:intron | 25.0% |
| ! | AGTTTCAGATTCAAAATATC+AGG | + | chr2_4:59184157-59184176 | Msa0338730:CDS | 25.0% |
| ! | TGAATTTAACAGGACAAAAT+GGG | - | chr2_4:59184890-59184909 | None:intergenic | 25.0% |
| ! | TTGAATTTAACAGGACAAAA+TGG | - | chr2_4:59184891-59184910 | None:intergenic | 25.0% |
| !! | ATTTTGTCCTGTTAAATTCA+AGG | + | chr2_4:59184890-59184909 | Msa0338730:three_prime_UTR | 25.0% |
| !! | TTTTGTCCTGTTAAATTCAA+GGG | + | chr2_4:59184891-59184910 | Msa0338730:three_prime_UTR | 25.0% |
| GAATACAATCAATCAATGGT+GGG | - | chr2_4:59180881-59180900 | None:intergenic | 30.0% | |
| AGAATACAATCAATCAATGG+TGG | - | chr2_4:59180882-59180901 | None:intergenic | 30.0% | |
| ! | TGATTGTATTCTCTAGAGAT+CGG | + | chr2_4:59180890-59180909 | Msa0338730:five_prime_UTR | 30.0% |
| AAAGCTACCGTTAACTTTAA+CGG | + | chr2_4:59181015-59181034 | Msa0338730:CDS | 30.0% | |
| ! | TTGTGTTTTACGTGTTCTAT+TGG | + | chr2_4:59181404-59181423 | Msa0338730:intron | 30.0% |
| ! | TTTGGATGATAATGTTTGTG+CGG | + | chr2_4:59181468-59181487 | Msa0338730:intron | 30.0% |
| !! | TTTTAAGTACACAGTTTGAG+TGG | + | chr2_4:59181593-59181612 | Msa0338730:intron | 30.0% |
| TTTAAGTACACAGTTTGAGT+GGG | + | chr2_4:59181594-59181613 | Msa0338730:intron | 30.0% | |
| !! | TTGTTTTTCAAAGAGTCTAG+CGG | + | chr2_4:59181701-59181720 | Msa0338730:intron | 30.0% |
| CACAATGTCTAATGTATATG+CGG | + | chr2_4:59181998-59182017 | Msa0338730:intron | 30.0% | |
| GATATGCATGCACATATATT+TGG | + | chr2_4:59182032-59182051 | Msa0338730:intron | 30.0% | |
| TATACTCAACTATCCATGAA+TGG | - | chr2_4:59182099-59182118 | None:intergenic | 30.0% | |
| TATTGGTAAATTGTCCAAGA+GGG | + | chr2_4:59182204-59182223 | Msa0338730:intron | 30.0% | |
| AGAAATGTTTGTGCTTCATA+GGG | + | chr2_4:59182370-59182389 | Msa0338730:intron | 30.0% | |
| TAAATCTTCTTTCATGGTGA+GGG | + | chr2_4:59182468-59182487 | Msa0338730:intron | 30.0% | |
| !! | TCTTCTAAAGTGGAATATGT+AGG | + | chr2_4:59182599-59182618 | Msa0338730:intron | 30.0% |
| AACATATTAGCAATGGTATC+AGG | - | chr2_4:59182822-59182841 | None:intergenic | 30.0% | |
| !!! | ATCACGCTCAACTTTTTTTT+AGG | + | chr2_4:59182900-59182919 | Msa0338730:intron | 30.0% |
| !!! | ACTTTTTTTTAGGATGAGAC+TGG | + | chr2_4:59182910-59182929 | Msa0338730:intron | 30.0% |
| TAAAAACAGGTAAATGTCCA+AGG | - | chr2_4:59183014-59183033 | None:intergenic | 30.0% | |
| !!! | GACATTTACCTGTTTTTACT+GGG | + | chr2_4:59183016-59183035 | Msa0338730:CDS | 30.0% |
| ! | TTTTACTGGGATAGTAGAAT+TGG | + | chr2_4:59183029-59183048 | Msa0338730:CDS | 30.0% |
| !! | CGTCTTTAAAACAATGTAAG+TGG | + | chr2_4:59183127-59183146 | Msa0338730:intron | 30.0% |
| ! | TTTAAAACAATGTAAGTGGG+TGG | + | chr2_4:59183131-59183150 | Msa0338730:intron | 30.0% |
| ! | GTTACTTTCATGGGAATATA+TGG | + | chr2_4:59183177-59183196 | Msa0338730:intron | 30.0% |
| ATGTGAAAAATCAGGGAAAT+AGG | - | chr2_4:59183263-59183282 | None:intergenic | 30.0% | |
| TCACATTTGTTTAGGTCTTT+AGG | + | chr2_4:59183277-59183296 | Msa0338730:intron | 30.0% | |
| !! | AATTTTTCAGCCAAAATCAC+TGG | - | chr2_4:59183311-59183330 | None:intergenic | 30.0% |
| CCCTGAAGACAAATAAATTA+TGG | - | chr2_4:59183410-59183429 | None:intergenic | 30.0% | |
| ! | TACAGTGTTGAAGATCATAT+TGG | - | chr2_4:59183433-59183452 | None:intergenic | 30.0% |
| ACTGTAATAACAAACCTTCT+TGG | + | chr2_4:59183447-59183466 | Msa0338730:intron | 30.0% | |
| ! | CGTCTTTAAAGGATTTAAGT+TGG | - | chr2_4:59183492-59183511 | None:intergenic | 30.0% |
| AAAAATCCAGTCCTAAACAA+GGG | - | chr2_4:59183613-59183632 | None:intergenic | 30.0% | |
| AAAAAATCCAGTCCTAAACA+AGG | - | chr2_4:59183614-59183633 | None:intergenic | 30.0% | |
| GTTACAGACTGAAATATGAA+CGG | + | chr2_4:59183778-59183797 | Msa0338730:intron | 30.0% | |
| TTACAGACTGAAATATGAAC+GGG | + | chr2_4:59183779-59183798 | Msa0338730:intron | 30.0% | |
| AAAATACTTAGGCATCTACA+TGG | - | chr2_4:59183814-59183833 | None:intergenic | 30.0% | |
| TTACACAGAAAATGCTTAAG+TGG | - | chr2_4:59183916-59183935 | None:intergenic | 30.0% | |
| ATTCAGTCCATTCTTTACAA+GGG | - | chr2_4:59183959-59183978 | None:intergenic | 30.0% | |
| TATTCAGTCCATTCTTTACA+AGG | - | chr2_4:59183960-59183979 | None:intergenic | 30.0% | |
| ! | ATCTGAAACTTCTTCTGAAA+TGG | - | chr2_4:59184147-59184166 | None:intergenic | 30.0% |
| ATTTGTCGAATAGGAACATA+AGG | - | chr2_4:59184411-59184430 | None:intergenic | 30.0% | |
| CTATCACAACAAAAACATGA+TGG | - | chr2_4:59184808-59184827 | None:intergenic | 30.0% | |
| !! | ATGTTTTTGTTGTGATAGCT+TGG | + | chr2_4:59184810-59184829 | Msa0338730:three_prime_UTR | 30.0% |
| GAATTTAACAGGACAAAATG+GGG | - | chr2_4:59184889-59184908 | None:intergenic | 30.0% | |
| CTGTAAAATTCAAAGCAGTT+TGG | + | chr2_4:59184949-59184968 | Msa0338730:three_prime_UTR | 30.0% | |
| AGAATAGCAATACACAATTG+TGG | - | chr2_4:59185090-59185109 | None:intergenic | 30.0% | |
| AAGAAGTTAGAGAGAGAAAG+TGG | - | chr2_4:59180774-59180793 | None:intergenic | 35.0% | |
| ! | AATCAATCAATGGTGGGAAA+TGG | - | chr2_4:59180875-59180894 | None:intergenic | 35.0% |
| !! | TTAACGGTAGCTTTAAACCT+CGG | - | chr2_4:59181009-59181028 | None:intergenic | 35.0% |
| !!! | TCAATGTCGCTTTTCGTTTT+AGG | + | chr2_4:59181186-59181205 | Msa0338730:intron | 35.0% |
| !!! | CAATGTCGCTTTTCGTTTTA+GGG | + | chr2_4:59181187-59181206 | Msa0338730:intron | 35.0% |
| CAAACTCACTTTGATGCATT+AGG | - | chr2_4:59181452-59181471 | None:intergenic | 35.0% | |
| CTAATGCATCAAAGTGAGTT+TGG | + | chr2_4:59181450-59181469 | Msa0338730:intron | 35.0% | |
| CACAGTATGAGTTGTTCTTA+TGG | + | chr2_4:59181558-59181577 | Msa0338730:intron | 35.0% | |
| TTAAGTACACAGTTTGAGTG+GGG | + | chr2_4:59181595-59181614 | Msa0338730:intron | 35.0% | |
| !! | GTTGTTTGACCGTTTTTAAG+TGG | + | chr2_4:59181639-59181658 | Msa0338730:intron | 35.0% |
| GCAAACAAATTGATATGCTG+GGG | - | chr2_4:59181783-59181802 | None:intergenic | 35.0% | |
| CGCAAACAAATTGATATGCT+GGG | - | chr2_4:59181784-59181803 | None:intergenic | 35.0% | |
| TCGCAAACAAATTGATATGC+TGG | - | chr2_4:59181785-59181804 | None:intergenic | 35.0% | |
| ATCATAAGAGCTGTACTTAC+AGG | + | chr2_4:59181811-59181830 | Msa0338730:intron | 35.0% | |
| TGCTGCAAAGATTGAATATG+AGG | - | chr2_4:59181840-59181859 | None:intergenic | 35.0% | |
| TCTAATGTATATGCGGCAAT+GGG | + | chr2_4:59182005-59182024 | Msa0338730:intron | 35.0% | |
| ! | GTATTGGTAAATTGTCCAAG+AGG | + | chr2_4:59182203-59182222 | Msa0338730:intron | 35.0% |
| ! | GTGTTATGCATGTGTTTTAC+TGG | + | chr2_4:59182298-59182317 | Msa0338730:intron | 35.0% |
| TTTCTCCATCTTCAAGAGTT+GGG | - | chr2_4:59182355-59182374 | None:intergenic | 35.0% | |
| ATTTCTCCATCTTCAAGAGT+TGG | - | chr2_4:59182356-59182375 | None:intergenic | 35.0% | |
| GAGAAATGTTTGTGCTTCAT+AGG | + | chr2_4:59182369-59182388 | Msa0338730:intron | 35.0% | |
| GAAAGAAGATTTACAGCACT+AGG | - | chr2_4:59182461-59182480 | None:intergenic | 35.0% | |
| GTGCTGTAAATCTTCTTTCA+TGG | + | chr2_4:59182462-59182481 | Msa0338730:intron | 35.0% | |
| GTAAATCTTCTTTCATGGTG+AGG | + | chr2_4:59182467-59182486 | Msa0338730:intron | 35.0% | |
| AAATCTTCTTTCATGGTGAG+GGG | + | chr2_4:59182469-59182488 | Msa0338730:intron | 35.0% | |
| ! | CACTTTTAGATCTTTCGTGT+AGG | - | chr2_4:59182544-59182563 | None:intergenic | 35.0% |
| CTACACGAAAGATCTAAAAG+TGG | + | chr2_4:59182542-59182561 | Msa0338730:intron | 35.0% | |
| AGATCTAAAAGTGGAATACG+AGG | + | chr2_4:59182551-59182570 | Msa0338730:intron | 35.0% | |
| GATCTAAAAGTGGAATACGA+GGG | + | chr2_4:59182552-59182571 | Msa0338730:intron | 35.0% | |
| ! | CTTCACCTTATCTTCTAAAG+TGG | + | chr2_4:59182589-59182608 | Msa0338730:intron | 35.0% |
| ATCAAAAGCGAGTTTCGAAA+AGG | + | chr2_4:59182709-59182728 | Msa0338730:intron | 35.0% | |
| AAGGATAATTAGTCCACTGA+TGG | + | chr2_4:59182728-59182747 | Msa0338730:intron | 35.0% | |
| AGGATAATTAGTCCACTGAT+GGG | + | chr2_4:59182729-59182748 | Msa0338730:intron | 35.0% | |
| !!! | GGACATTTACCTGTTTTTAC+TGG | + | chr2_4:59183015-59183034 | Msa0338730:CDS | 35.0% |
| TCTACTATCCCAGTAAAAAC+AGG | - | chr2_4:59183027-59183046 | None:intergenic | 35.0% | |
| CTCGTCTTCTGAATATACAT+AGG | + | chr2_4:59183212-59183231 | Msa0338730:intron | 35.0% | |
| AATAGGCTTGAGTTAGGTAT+TGG | - | chr2_4:59183246-59183265 | None:intergenic | 35.0% | |
| !! | GTTTAGGTCTTTAGGACATT+TGG | + | chr2_4:59183285-59183304 | Msa0338730:intron | 35.0% |
| CTTATGGTATTGTGGTGAAT+CGG | + | chr2_4:59183334-59183353 | Msa0338730:intron | 35.0% | |
| AATGGCTTAAATTGTGCCAA+AGG | - | chr2_4:59183552-59183571 | None:intergenic | 35.0% | |
| ! | TTATTTCCCTTGTTTAGGAC+TGG | + | chr2_4:59183604-59183623 | Msa0338730:intron | 35.0% |
| ! | AGGAGGGAATTTTATTGAAG+TGG | + | chr2_4:59183660-59183679 | Msa0338730:intron | 35.0% |
| GATTTGAACTCACTACATTG+AGG | + | chr2_4:59183715-59183734 | Msa0338730:intron | 35.0% | |
| ! | TCTTTTGCCACTGATGAAAA+AGG | - | chr2_4:59184000-59184019 | None:intergenic | 35.0% |
| TCTAATTCGTCATTGTTCTC+CGG | - | chr2_4:59184045-59184064 | None:intergenic | 35.0% | |
| TAGAACAGATCACTATAGCA+CGG | + | chr2_4:59184061-59184080 | Msa0338730:CDS | 35.0% | |
| ! | TTGACATCTTTTCCTTCAGA+CGG | - | chr2_4:59184101-59184120 | None:intergenic | 35.0% |
| CAATGTCTAATCCAAATGCT+CGG | + | chr2_4:59184118-59184137 | Msa0338730:CDS | 35.0% | |
| ! | TCTTTTGGCAAATTAGAGGA+AGG | - | chr2_4:59184221-59184240 | None:intergenic | 35.0% |
| CTTTCTATTGCAGAAGATTG+GGG | - | chr2_4:59184345-59184364 | None:intergenic | 35.0% | |
| GCTTTCTATTGCAGAAGATT+GGG | - | chr2_4:59184346-59184365 | None:intergenic | 35.0% | |
| AATCTTCTGCAATAGAAAGC+CGG | + | chr2_4:59184346-59184365 | Msa0338730:CDS | 35.0% | |
| ! | TTCATCTTTTCTTAGTGGTG+GGG | - | chr2_4:59184601-59184620 | None:intergenic | 35.0% |
| ! | GTTCATCTTTTCTTAGTGGT+GGG | - | chr2_4:59184602-59184621 | None:intergenic | 35.0% |
| TCCAGCTAAAATTCTTGAGA+TGG | + | chr2_4:59184680-59184699 | Msa0338730:CDS | 35.0% | |
| !! | TCCATCTCAAGAATTTTAGC+TGG | - | chr2_4:59184684-59184703 | None:intergenic | 35.0% |
| ATCATGCTCACATGCTTAAA+AGG | - | chr2_4:59185026-59185045 | None:intergenic | 35.0% | |
| AAGTTAGAGAGAGAAAGTGG+AGG | - | chr2_4:59180771-59180790 | None:intergenic | 40.0% | |
| TTCTCTCTCTAACTTCTTCC+CGG | + | chr2_4:59180776-59180795 | Msa0338730:five_prime_UTR | 40.0% | |
| !! | TGAATTTGGTGTTAGGGTTC+CGG | - | chr2_4:59180798-59180817 | None:intergenic | 40.0% |
| !! | GGTGGTTGAATTTGGTGTTA+GGG | - | chr2_4:59180804-59180823 | None:intergenic | 40.0% |
| CTAACACCAAATTCAACCAC+CGG | + | chr2_4:59180803-59180822 | Msa0338730:five_prime_UTR | 40.0% | |
| TTGTTACCGGTGGTTGAATT+TGG | - | chr2_4:59180812-59180831 | None:intergenic | 40.0% | |
| ! | ATCAATGGTGGGAAATGGAT+CGG | - | chr2_4:59180870-59180889 | None:intergenic | 40.0% |
| GATCTCGCCGTTAAAGTTAA+CGG | - | chr2_4:59181025-59181044 | None:intergenic | 40.0% | |
| !!! | CGTTCTGATGTGCTTTGTTT+TGG | + | chr2_4:59181294-59181313 | Msa0338730:intron | 40.0% |
| !!! | TGTGCTTTGTTTTGGAGCTT+AGG | + | chr2_4:59181302-59181321 | Msa0338730:intron | 40.0% |
| GGATTATGCTCGGGAAATTA+CGG | + | chr2_4:59181492-59181511 | Msa0338730:intron | 40.0% | |
| TAAGTACACAGTTTGAGTGG+GGG | + | chr2_4:59181596-59181615 | Msa0338730:intron | 40.0% | |
| CTCACTATGTGCTAAGATGT+GGG | + | chr2_4:59181735-59181754 | Msa0338730:intron | 40.0% | |
| TCACTATGTGCTAAGATGTG+GGG | + | chr2_4:59181736-59181755 | Msa0338730:intron | 40.0% | |
| GACTAACATTCACACTAGAC+AGG | + | chr2_4:59181947-59181966 | Msa0338730:intron | 40.0% | |
| GTCTAATGTATATGCGGCAA+TGG | + | chr2_4:59182004-59182023 | Msa0338730:intron | 40.0% | |
| CTAATGTATATGCGGCAATG+GGG | + | chr2_4:59182006-59182025 | Msa0338730:intron | 40.0% | |
| GTCAACCCATAGTTGAGTAT+TGG | + | chr2_4:59182187-59182206 | Msa0338730:intron | 40.0% | |
| ACATGGAAATGTGCCATACA+TGG | - | chr2_4:59182238-59182257 | None:intergenic | 40.0% | |
| TTGTAATCAGACGCCTAGTA+AGG | + | chr2_4:59182274-59182293 | Msa0338730:intron | 40.0% | |
| CATGCATAACACTCCTTACT+AGG | - | chr2_4:59182290-59182309 | None:intergenic | 40.0% | |
| TTCTCCATCTTCAAGAGTTG+GGG | - | chr2_4:59182354-59182373 | None:intergenic | 40.0% | |
| AATACGAGGGATATCACCTT+TGG | + | chr2_4:59182565-59182584 | Msa0338730:intron | 40.0% | |
| GAAGATAAGGTGAAGACCAA+AGG | - | chr2_4:59182584-59182603 | None:intergenic | 40.0% | |
| AAGAAATTGCACAGCGAGTA+GGG | + | chr2_4:59182953-59182972 | Msa0338730:CDS | 40.0% | |
| TCAGTACACAACGTACAGAT+CGG | + | chr2_4:59182987-59183006 | Msa0338730:CDS | 40.0% | |
| TTGGCTGGAATCACATTTAC+TGG | + | chr2_4:59183048-59183067 | Msa0338730:CDS | 40.0% | |
| ! | GCTTGTTTCTTATTCTTCGC+AGG | - | chr2_4:59183078-59183097 | None:intergenic | 40.0% |
| ! | TGCCATAGCTGCATTTTTCT+CGG | - | chr2_4:59183100-59183119 | None:intergenic | 40.0% |
| !! | TGAGTTAGGTATTGGCTTTG+TGG | - | chr2_4:59183238-59183257 | None:intergenic | 40.0% |
| AAATATGTAGGCGTCCAAGA+AGG | - | chr2_4:59183464-59183483 | None:intergenic | 40.0% | |
| ! | AAGGTAACAAGCTTTATGGC+AGG | - | chr2_4:59183533-59183552 | None:intergenic | 40.0% |
| !! | GCCATAAAGCTTGTTACCTT+TGG | + | chr2_4:59183533-59183552 | Msa0338730:intron | 40.0% |
| GCCAAAGGTAACAAGCTTTA+TGG | - | chr2_4:59183537-59183556 | None:intergenic | 40.0% | |
| TAGTGAGTTCAAATCCACTC+GGG | - | chr2_4:59183710-59183729 | None:intergenic | 40.0% | |
| GTAGTGAGTTCAAATCCACT+CGG | - | chr2_4:59183711-59183730 | None:intergenic | 40.0% | |
| TTCAGTCTGTAACACACTTG+AGG | - | chr2_4:59183771-59183790 | None:intergenic | 40.0% | |
| AGAACAGATCACTATAGCAC+GGG | + | chr2_4:59184062-59184081 | Msa0338730:CDS | 40.0% | |
| TTTACTGAACTACCGTCTGA+AGG | + | chr2_4:59184086-59184105 | Msa0338730:CDS | 40.0% | |
| TGAAATGGAATCCGAGCATT+TGG | - | chr2_4:59184132-59184151 | None:intergenic | 40.0% | |
| TAGAGGAAGGATCTTTGATG+TGG | - | chr2_4:59184208-59184227 | None:intergenic | 40.0% | |
| ! | CCTGTCTTTTGGCAAATTAG+AGG | - | chr2_4:59184225-59184244 | None:intergenic | 40.0% |
| ! | CCTCTAATTTGCCAAAAGAC+AGG | + | chr2_4:59184222-59184241 | Msa0338730:CDS | 40.0% |
| CAAATGAAAATCCTCGAAGC+AGG | + | chr2_4:59184274-59184293 | Msa0338730:CDS | 40.0% | |
| GGCTTTCTATTGCAGAAGAT+TGG | - | chr2_4:59184347-59184366 | None:intergenic | 40.0% | |
| ATCTTCTGCAATAGAAAGCC+GGG | + | chr2_4:59184347-59184366 | Msa0338730:CDS | 40.0% | |
| TGTCGAATAGGAACATAAGG+TGG | - | chr2_4:59184408-59184427 | None:intergenic | 40.0% | |
| CAAGGTCTCATTTGTCGAAT+AGG | - | chr2_4:59184420-59184439 | None:intergenic | 40.0% | |
| ATTATCTGATGCACTGAGGT+AGG | - | chr2_4:59184513-59184532 | None:intergenic | 40.0% | |
| CCTCAGTGCATCAGATAATA+CGG | + | chr2_4:59184514-59184533 | Msa0338730:CDS | 40.0% | |
| CTCAGTGCATCAGATAATAC+GGG | + | chr2_4:59184515-59184534 | Msa0338730:CDS | 40.0% | |
| ! | GGTTCATCTTTTCTTAGTGG+TGG | - | chr2_4:59184603-59184622 | None:intergenic | 40.0% |
| ! | GCAGGTTCATCTTTTCTTAG+TGG | - | chr2_4:59184606-59184625 | None:intergenic | 40.0% |
| ! | TACTGGCAGGTAGATCTTTT+TGG | - | chr2_4:59184635-59184654 | None:intergenic | 40.0% |
| GGTAAGGAAGGAAAAAGGAA+GGG | - | chr2_4:59184868-59184887 | None:intergenic | 40.0% | |
| AATGGGGTAAGGAAGGAAAA+AGG | - | chr2_4:59184873-59184892 | None:intergenic | 40.0% | |
| TAACAGGACAAAATGGGGTA+AGG | - | chr2_4:59184884-59184903 | None:intergenic | 40.0% | |
| GTCCTGTTAAATTCAAGGGT+TGG | + | chr2_4:59184895-59184914 | Msa0338730:three_prime_UTR | 40.0% | |
| ! | GTGGAGCATTTACTAATCAC+AGG | - | chr2_4:59185071-59185090 | None:intergenic | 40.0% |
| AGAGAAGTAGAGGAGAGTAG+TGG | - | chr2_4:59180729-59180748 | None:intergenic | 45.0% | |
| GAAAGTGGAGGAGAGAGAAA+GGG | - | chr2_4:59180759-59180778 | None:intergenic | 45.0% | |
| AGAAAGTGGAGGAGAGAGAA+AGG | - | chr2_4:59180760-59180779 | None:intergenic | 45.0% | |
| !! | GAATTTGGTGTTAGGGTTCC+GGG | - | chr2_4:59180797-59180816 | None:intergenic | 45.0% |
| !! | CGGTGGTTGAATTTGGTGTT+AGG | - | chr2_4:59180805-59180824 | None:intergenic | 45.0% |
| CAACCACCGGTAACAATTTC+CGG | + | chr2_4:59180816-59180835 | Msa0338730:five_prime_UTR | 45.0% | |
| GTGATGCCGGAAATTGTTAC+CGG | - | chr2_4:59180825-59180844 | None:intergenic | 45.0% | |
| TCACGAATGCAAGTGTAGGA+AGG | - | chr2_4:59180970-59180989 | None:intergenic | 45.0% | |
| TCCTACACTTGCATTCGTGA+AGG | + | chr2_4:59180970-59180989 | Msa0338730:CDS | 45.0% | |
| ACCTTCACGAATGCAAGTGT+AGG | - | chr2_4:59180974-59180993 | None:intergenic | 45.0% | |
| GGAATTGAGAGCAACTTCAG+CGG | - | chr2_4:59181097-59181116 | None:intergenic | 45.0% | |
| GAAACTCACGAGGATCTTAG+CGG | - | chr2_4:59181151-59181170 | None:intergenic | 45.0% | |
| GAGAGAAAACGAAACTCACG+AGG | - | chr2_4:59181161-59181180 | None:intergenic | 45.0% | |
| ! | GGATGATAATGTTTGTGCGG+AGG | + | chr2_4:59181471-59181490 | Msa0338730:intron | 45.0% |
| TTTGTGCGGAGGATTATGCT+CGG | + | chr2_4:59181482-59181501 | Msa0338730:intron | 45.0% | |
| GCTCACTATGTGCTAAGATG+TGG | + | chr2_4:59181734-59181753 | Msa0338730:intron | 45.0% | |
| GAAATGTGCCATACATGGCT+AGG | - | chr2_4:59182233-59182252 | None:intergenic | 45.0% | |
| !! | GTGCTTCATAGGGTGTTGAT+AGG | + | chr2_4:59182380-59182399 | Msa0338730:intron | 45.0% |
| TTTCATGGTGAGGGGATACA+GGG | + | chr2_4:59182477-59182496 | Msa0338730:intron | 45.0% | |
| GCTGTGCAATTTCTTGCAAG+AGG | - | chr2_4:59182948-59182967 | None:intergenic | 45.0% | |
| CAAGAAATTGCACAGCGAGT+AGG | + | chr2_4:59182952-59182971 | Msa0338730:CDS | 45.0% | |
| AGAAATTGCACAGCGAGTAG+GGG | + | chr2_4:59182954-59182973 | Msa0338730:CDS | 45.0% | |
| TACGTTGTGTACTGAGGCAA+TGG | - | chr2_4:59182982-59183001 | None:intergenic | 45.0% | |
| GATCTGTACGTTGTGTACTG+AGG | - | chr2_4:59182988-59183007 | None:intergenic | 45.0% | |
| CAGTACACAACGTACAGATC+GGG | + | chr2_4:59182988-59183007 | Msa0338730:CDS | 45.0% | |
| ACTGGGATAGTAGAATTGGC+TGG | + | chr2_4:59183033-59183052 | Msa0338730:CDS | 45.0% | |
| AGCCGAGAAAAATGCAGCTA+TGG | + | chr2_4:59183095-59183114 | Msa0338730:CDS | 45.0% | |
| AAAATGCAGCTATGGCAGCT+TGG | + | chr2_4:59183103-59183122 | Msa0338730:CDS | 45.0% | |
| CAGGGAAATAGGCTTGAGTT+AGG | - | chr2_4:59183252-59183271 | None:intergenic | 45.0% | |
| ! | GGACATTTGGCCAGTGATTT+TGG | + | chr2_4:59183298-59183317 | Msa0338730:intron | 45.0% |
| GCAGGAGATTGAGAACTAGT+TGG | - | chr2_4:59184183-59184202 | None:intergenic | 45.0% | |
| AGGAAGGATCTTTGATGTGG+TGG | - | chr2_4:59184205-59184224 | None:intergenic | 45.0% | |
| ! | TGTTTCGAGGTCCTGTCTTT+TGG | - | chr2_4:59184236-59184255 | None:intergenic | 45.0% |
| ACCTCGAAACAGACCTTCAT+CGG | + | chr2_4:59184245-59184264 | Msa0338730:CDS | 45.0% | |
| !! | TCATTTGCTGTTGCCGATGA+AGG | - | chr2_4:59184261-59184280 | None:intergenic | 45.0% |
| ! | CTGCAAAATGGACTTGTCAC+TGG | - | chr2_4:59184319-59184338 | None:intergenic | 45.0% |
| GACAAATGAGACCTTGCCAT+GGG | + | chr2_4:59184424-59184443 | Msa0338730:CDS | 45.0% | |
| CCGTATTATCTGATGCACTG+AGG | - | chr2_4:59184517-59184536 | None:intergenic | 45.0% | |
| TTGCTCCTCCAGTCAGTATT+CGG | + | chr2_4:59184553-59184572 | Msa0338730:CDS | 45.0% | |
| ! | AGGTAGATCTTTTTGGACGG+GGG | - | chr2_4:59184628-59184647 | None:intergenic | 45.0% |
| ! | CAGGTAGATCTTTTTGGACG+GGG | - | chr2_4:59184629-59184648 | None:intergenic | 45.0% |
| ! | GCAGGTAGATCTTTTTGGAC+GGG | - | chr2_4:59184630-59184649 | None:intergenic | 45.0% |
| ! | GGCAGGTAGATCTTTTTGGA+CGG | - | chr2_4:59184631-59184650 | None:intergenic | 45.0% |
| AAGCTTATCTTGCTCGACAG+GGG | - | chr2_4:59184661-59184680 | None:intergenic | 45.0% | |
| GAAGCTTATCTTGCTCGACA+GGG | - | chr2_4:59184662-59184681 | None:intergenic | 45.0% | |
| ACCAGAGACTTTGCAGAGTT+TGG | + | chr2_4:59184731-59184750 | Msa0338730:CDS | 45.0% | |
| TCCAAACTCTGCAAAGTCTC+TGG | - | chr2_4:59184735-59184754 | None:intergenic | 45.0% | |
| GGGTAAGGAAGGAAAAAGGA+AGG | - | chr2_4:59184869-59184888 | None:intergenic | 45.0% | |
| AGGACAAAATGGGGTAAGGA+AGG | - | chr2_4:59184880-59184899 | None:intergenic | 45.0% | |
| CGCCAACCCTTGAATTTAAC+AGG | - | chr2_4:59184900-59184919 | None:intergenic | 45.0% | |
| !! | TAAAATAAAAATAAAAATTC+AGG | + | chr2_4:59183636-59183655 | Msa0338730:intron | 5.0% |
| ATGCCGGAAATTGTTACCGG+TGG | - | chr2_4:59180822-59180841 | None:intergenic | 50.0% | |
| TGGTGGGAAATGGATCGGAT+CGG | - | chr2_4:59180865-59180884 | None:intergenic | 50.0% | |
| CAAGAACCAGCTTCAAGAGC+TGG | + | chr2_4:59180921-59180940 | Msa0338730:CDS | 50.0% | |
| TTTAAACCTCGGCGCGTGAT+CGG | - | chr2_4:59180998-59181017 | None:intergenic | 50.0% | |
| CGGAGAGTTGAACAGTAGTG+AGG | - | chr2_4:59181057-59181076 | None:intergenic | 50.0% | |
| ATTGAGAGCAACTTCAGCGG+CGG | - | chr2_4:59181094-59181113 | None:intergenic | 50.0% | |
| CTCAATTCCCTTTCTCACCG+TGG | + | chr2_4:59181108-59181127 | Msa0338730:CDS | 50.0% | |
| AGAAGGACCACGGTGAGAAA+GGG | - | chr2_4:59181118-59181137 | None:intergenic | 50.0% | |
| TTGTGCGGAGGATTATGCTC+GGG | + | chr2_4:59181483-59181502 | Msa0338730:intron | 50.0% | |
| TACACAGTTTGAGTGGGGGA+TGG | + | chr2_4:59181600-59181619 | Msa0338730:intron | 50.0% | |
| TTTGAGTGGGGGATGGTGTT+TGG | + | chr2_4:59181607-59181626 | Msa0338730:intron | 50.0% | |
| TGCTAAGATGTGGGGAGTTG+CGG | + | chr2_4:59181744-59181763 | Msa0338730:intron | 50.0% | |
| AAATTGATATGCTGGGGCGC+AGG | - | chr2_4:59181777-59181796 | None:intergenic | 50.0% | |
| ACATGGCTAGGATACCCTCT+TGG | - | chr2_4:59182221-59182240 | None:intergenic | 50.0% | |
| !! | GAGGGTATCCTAGCCATGTA+TGG | + | chr2_4:59182222-59182241 | Msa0338730:intron | 50.0% |
| GACACCCCAACTCTTGAAGA+TGG | + | chr2_4:59182347-59182366 | Msa0338730:intron | 50.0% | |
| CTTTCATGGTGAGGGGATAC+AGG | + | chr2_4:59182476-59182495 | Msa0338730:intron | 50.0% | |
| AGGAATCTCGCACATGATGC+AGG | + | chr2_4:59182619-59182638 | Msa0338730:intron | 50.0% | |
| GGAATCTCGCACATGATGCA+GGG | + | chr2_4:59182620-59182639 | Msa0338730:intron | 50.0% | |
| GGGTCTGTCTGACCCATTAT+TGG | + | chr2_4:59182749-59182768 | Msa0338730:intron | 50.0% | |
| CACTCGGGACGGTTGTAAAA+TGG | - | chr2_4:59183695-59183714 | None:intergenic | 50.0% | |
| ! | CATTTTACAACCGTCCCGAG+TGG | + | chr2_4:59183693-59183712 | Msa0338730:intron | 50.0% |
| GAGTTCAAATCCACTCGGGA+CGG | - | chr2_4:59183706-59183725 | None:intergenic | 50.0% | |
| ! | AACACACTTGAGGCACTAGC+TGG | - | chr2_4:59183761-59183780 | None:intergenic | 50.0% |
| CGGTTCAGTTGAAGAGCTAG+CGG | - | chr2_4:59184025-59184044 | None:intergenic | 50.0% | |
| ! | CGCTAGCTCTTCAACTGAAC+CGG | + | chr2_4:59184023-59184042 | Msa0338730:CDS | 50.0% |
| AGGATCTTTGATGTGGTGGC+AGG | - | chr2_4:59184201-59184220 | None:intergenic | 50.0% | |
| AGATTGGGGCTGCTGCAAAA+TGG | - | chr2_4:59184331-59184350 | None:intergenic | 50.0% | |
| CGACAAATGAGACCTTGCCA+TGG | + | chr2_4:59184423-59184442 | Msa0338730:CDS | 50.0% | |
| TTGCACCTGCAGTGTCTGTT+AGG | + | chr2_4:59184448-59184467 | Msa0338730:CDS | 50.0% | |
| ACAGTCCTAACAGACACTGC+AGG | - | chr2_4:59184456-59184475 | None:intergenic | 50.0% | |
| ATCTGATGCACTGAGGTAGG+TGG | - | chr2_4:59184510-59184529 | None:intergenic | 50.0% | |
| ACTGGAGGAGCAATTCGTAC+AGG | - | chr2_4:59184546-59184565 | None:intergenic | 50.0% | |
| ACAGCTTGCCGAATACTGAC+TGG | - | chr2_4:59184564-59184583 | None:intergenic | 50.0% | |
| GGAAGCTTATCTTGCTCGAC+AGG | - | chr2_4:59184663-59184682 | None:intergenic | 50.0% | |
| TGCAAAGTCTCTGGTTGTGG+TGG | - | chr2_4:59184726-59184745 | None:intergenic | 50.0% | |
| CTCTGCAAAGTCTCTGGTTG+TGG | - | chr2_4:59184729-59184748 | None:intergenic | 50.0% | |
| GGGAGAGGAGAGAGAAGTAG+AGG | - | chr2_4:59180739-59180758 | None:intergenic | 55.0% | |
| TGGAGGAGAGAGAAAGGGAG+AGG | - | chr2_4:59180754-59180773 | None:intergenic | 55.0% | |
| ATTTCCGGCATCACCGTCAC+CGG | + | chr2_4:59180831-59180850 | Msa0338730:five_prime_UTR | 55.0% | |
| ATCGGGTGATTCTCCGGTGA+CGG | - | chr2_4:59180847-59180866 | None:intergenic | 55.0% | |
| GATCGGATCGGGTGATTCTC+CGG | - | chr2_4:59180853-59180872 | None:intergenic | 55.0% | |
| GGTGGGAAATGGATCGGATC+GGG | - | chr2_4:59180864-59180883 | None:intergenic | 55.0% | |
| TTAAACCTCGGCGCGTGATC+GGG | - | chr2_4:59180997-59181016 | None:intergenic | 55.0% | |
| GAGAAGGACCACGGTGAGAA+AGG | - | chr2_4:59181119-59181138 | None:intergenic | 55.0% | |
| CGAGAGAGTGAGAAGGACCA+CGG | - | chr2_4:59181128-59181147 | None:intergenic | 55.0% | |
| TTAGCGGCGAGAGAGTGAGA+AGG | - | chr2_4:59181135-59181154 | None:intergenic | 55.0% | |
| ATGGTGAGGGGATACAGGGA+AGG | + | chr2_4:59182481-59182500 | Msa0338730:intron | 55.0% | |
| TGGTGAGGGGATACAGGGAA+GGG | + | chr2_4:59182482-59182501 | Msa0338730:intron | 55.0% | |
| AGGGGATACAGGGAAGGGTT+AGG | + | chr2_4:59182487-59182506 | Msa0338730:intron | 55.0% | |
| ACAACGTACAGATCGGGCCT+TGG | + | chr2_4:59182994-59183013 | Msa0338730:CDS | 55.0% | |
| GCCGATGAAGGTCTGTTTCG+AGG | - | chr2_4:59184249-59184268 | None:intergenic | 55.0% | |
| ! | GGACTTGTCACTGGTTGCTG+CGG | - | chr2_4:59184310-59184329 | None:intergenic | 55.0% |
| ACACTGCAGGTGCAATCCCA+TGG | - | chr2_4:59184443-59184462 | None:intergenic | 55.0% | |
| AGAGGTGGTGCAGAGAACAC+AGG | - | chr2_4:59184483-59184502 | None:intergenic | 55.0% | |
| !! | ACTGAGGTAGGTGGTGGAAG+AGG | - | chr2_4:59184501-59184520 | None:intergenic | 55.0% |
| TGATGCACTGAGGTAGGTGG+TGG | - | chr2_4:59184507-59184526 | None:intergenic | 55.0% | |
| GGAGGAGCAATTCGTACAGG+AGG | - | chr2_4:59184543-59184562 | None:intergenic | 55.0% | |
| ! | GCTTGCCGAATACTGACTGG+AGG | - | chr2_4:59184561-59184580 | None:intergenic | 55.0% |
| ! | AGTGGTGGGGCAGCAAATAC+AGG | - | chr2_4:59184588-59184607 | None:intergenic | 55.0% |
| ! | AGATCTTTTTGGACGGGGGC+AGG | - | chr2_4:59184624-59184643 | None:intergenic | 55.0% |
| !! | TTGCTCGACAGGGGTACTAC+TGG | - | chr2_4:59184652-59184671 | None:intergenic | 55.0% |
| ! | TTCTCCGGTGACGGTGATGC+CGG | - | chr2_4:59180838-59180857 | None:intergenic | 60.0% |
| TCTGCGCCAGCTCTTGAAGC+TGG | - | chr2_4:59180930-59180949 | None:intergenic | 60.0% | |
| ! | CGGCGGAGTGTTCAGCTTGA+CGG | - | chr2_4:59181077-59181096 | None:intergenic | 60.0% |
| GGGTCAGACAGACCCATCAG+TGG | - | chr2_4:59182744-59182763 | None:intergenic | 60.0% | |
| ! | TTGTCACTGGTTGCTGCGGC+TGG | - | chr2_4:59184306-59184325 | None:intergenic | 60.0% |
| TGCAGGGAACCTCAGAGGAC+GGG | - | chr2_4:59184376-59184395 | None:intergenic | 60.0% | |
| CTGCAGGGAACCTCAGAGGA+CGG | - | chr2_4:59184377-59184396 | None:intergenic | 60.0% | |
| AAGGTGGTGCTCCTGCTGCA+GGG | - | chr2_4:59184392-59184411 | None:intergenic | 60.0% | |
| TAAGGTGGTGCTCCTGCTGC+AGG | - | chr2_4:59184393-59184412 | None:intergenic | 60.0% | |
| GCAGGTGCAATCCCATGGCA+AGG | - | chr2_4:59184438-59184457 | None:intergenic | 60.0% | |
| !! | GAGGTAGGTGGTGGAAGAGG+TGG | - | chr2_4:59184498-59184517 | None:intergenic | 60.0% |
| !! | TCGACAGGGGTACTACTGGC+AGG | - | chr2_4:59184648-59184667 | None:intergenic | 60.0% |
| ! | TCACTGGTTGCTGCGGCTGG+CGG | - | chr2_4:59184303-59184322 | None:intergenic | 65.0% |
| ACCTCAGAGGACGGGTCACC+CGG | - | chr2_4:59184368-59184387 | None:intergenic | 65.0% | |
| CCTGCTGCAGGGAACCTCAG+AGG | - | chr2_4:59184381-59184400 | None:intergenic | 65.0% | |
| !! | CCTCTGAGGTTCCCTGCAGC+AGG | + | chr2_4:59184378-59184397 | Msa0338730:CDS | 65.0% |
| AAGGTCCCGATCACGCGCCG+AGG | + | chr2_4:59180989-59181008 | Msa0338730:CDS | 70.0% | |
| ! | GCTGGCGGATGCCTGCTTCG+AGG | - | chr2_4:59184288-59184307 | None:intergenic | 70.0% |
| GCCGGGTGACCCGTCCTCTG+AGG | + | chr2_4:59184364-59184383 | Msa0338730:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 59180686 | 59185138 | 59180686 | ID=Msa0338730;Name=Msa0338730 |
| chr2_4 | mRNA | 59180686 | 59185138 | 59180686 | ID=Msa0338730-mRNA-1;Parent=Msa0338730;Name=Msa0338730-mRNA-1;_AED=0.02;_eAED=0.02;_QI=230|1|1|1|1|1|3|368|408 |
| chr2_4 | exon | 59180686 | 59181161 | 59180686 | ID=Msa0338730-mRNA-1:exon:18335;Parent=Msa0338730-mRNA-1 |
| chr2_4 | exon | 59182922 | 59183141 | 59182922 | ID=Msa0338730-mRNA-1:exon:18336;Parent=Msa0338730-mRNA-1 |
| chr2_4 | exon | 59184010 | 59185138 | 59184010 | ID=Msa0338730-mRNA-1:exon:18337;Parent=Msa0338730-mRNA-1 |
| chr2_4 | five_prime_UTR | 59180686 | 59180915 | 59180686 | ID=Msa0338730-mRNA-1:five_prime_utr;Parent=Msa0338730-mRNA-1 |
| chr2_4 | CDS | 59180916 | 59181161 | 59180916 | ID=Msa0338730-mRNA-1:cds;Parent=Msa0338730-mRNA-1 |
| chr2_4 | CDS | 59182922 | 59183141 | 59182922 | ID=Msa0338730-mRNA-1:cds;Parent=Msa0338730-mRNA-1 |
| chr2_4 | CDS | 59184010 | 59184770 | 59184010 | ID=Msa0338730-mRNA-1:cds;Parent=Msa0338730-mRNA-1 |
| chr2_4 | three_prime_UTR | 59184771 | 59185138 | 59184771 | ID=Msa0338730-mRNA-1:three_prime_utr;Parent=Msa0338730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
