Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0273000 | XP_003593674.1 | 97.724 | 615 | 11 | 2 | 1 | 613 | 1 | 614 | 0.0 | 1232 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0273000 | G7IFH4 | 97.724 | 615 | 11 | 2 | 1 | 613 | 1 | 614 | 0.0 | 1232 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0045660 | Msa0273000 | 0.801166 | 1.023686e-48 | -8.615850e-47 |
| Msa0212730 | Msa0273000 | 0.837899 | 3.958291e-57 | -8.615850e-47 |
| Msa0224370 | Msa0273000 | 0.817576 | 3.068990e-52 | -8.615850e-47 |
| Msa0224400 | Msa0273000 | 0.826168 | 3.144691e-54 | -8.615850e-47 |
| Msa0273000 | Msa0311570 | 0.840580 | 7.980049e-58 | -8.615850e-47 |
| Msa0273000 | Msa0358290 | 0.814388 | 1.580510e-51 | -8.615850e-47 |
| Msa0273000 | Msa0378670 | 0.804472 | 2.125370e-49 | -8.615850e-47 |
| Msa0273000 | Msa0565530 | 0.815305 | 9.895617e-52 | -8.615850e-47 |
| Msa0273000 | Msa0802530 | 0.811188 | 7.931445e-51 | -8.615850e-47 |
| Msa0273000 | Msa0840890 | 0.827482 | 1.526723e-54 | -8.615850e-47 |
| Msa0273000 | Msa1069440 | 0.825191 | 5.362151e-54 | -8.615850e-47 |
| Msa0273000 | Msa1113280 | 0.804090 | 2.552150e-49 | -8.615850e-47 |
| Msa0273000 | Msa1157310 | 0.815457 | 9.155883e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0273000 | MtrunA17_Chr2g0283031 | 97.704 | 392 | 7 | 1 | 224 | 613 | 1 | 392 | 0.0 | 788 |
| Msa0273000 | MtrunA17_Chr2g0283021 | 97.596 | 208 | 4 | 1 | 1 | 208 | 1 | 207 | 9.74e-144 | 415 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0273000 | AT1G28530.2 | 55.966 | 595 | 243 | 11 | 29 | 611 | 22 | 609 | 0.0 | 618 |
| Msa0273000 | AT1G28530.1 | 55.872 | 596 | 243 | 12 | 29 | 611 | 22 | 610 | 0.0 | 613 |
Find 184 sgRNAs with CRISPR-Local
Find 438 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCTGAAATTGTAGATTTA+AGG | 0.087487 | 2_3:+4595500 | Msa0273000:three_prime_UTR |
| TCTCTACAGTTTAGAATATT+TGG | 0.115970 | 2_3:+4595778 | Msa0273000:three_prime_UTR |
| ATCCTTAAATCTACAATTTC+AGG | 0.117555 | 2_3:-4595502 | None:intergenic |
| AATGGGAGATTCAAAGTTTC+AGG | 0.187379 | 2_3:+4592256 | Msa0273000:CDS |
| GACCTTTAGGCAAGTGGTTT+TGG | 0.229859 | 2_3:+4591597 | Msa0273000:CDS |
| TTTCAGGATTAATTGTTTAA+AGG | 0.234160 | 2_3:-4595486 | None:intergenic |
| GGGTGGTGTTGGGGAGGTGG+AGG | 0.234403 | 2_3:-4590119 | None:intergenic |
| GAAAATCCCTTCCTCCATAT+TGG | 0.244922 | 2_3:+4595644 | Msa0273000:three_prime_UTR |
| AAGGGGTGGTGTTGGGGAGG+TGG | 0.255189 | 2_3:-4590122 | None:intergenic |
| GGTGGAGGGGTGGGGAGAAG+AGG | 0.261614 | 2_3:-4590104 | None:intergenic |
| GTTGGGGAGGTGGAGGGGTG+GGG | 0.275118 | 2_3:-4590112 | None:intergenic |
| GTGTTGGGGAGGTGGAGGGG+TGG | 0.279611 | 2_3:-4590114 | None:intergenic |
| TGTTTAAAGGATCACTGATA+TGG | 0.296506 | 2_3:-4595473 | None:intergenic |
| TGTTGGGGAGGTGGAGGGGT+GGG | 0.297901 | 2_3:-4590113 | None:intergenic |
| CGGTGACTGGAATTGTCTTC+GGG | 0.299528 | 2_3:-4590170 | None:intergenic |
| AAAATCCCTTCCTCCATATT+GGG | 0.304075 | 2_3:+4595645 | Msa0273000:three_prime_UTR |
| AGAATTGATTACCTTTCTAT+TGG | 0.310262 | 2_3:-4593187 | None:intergenic |
| CTTTGAATCTCCCATTATCT+TGG | 0.313417 | 2_3:-4592249 | None:intergenic |
| TGGGGAGAAGAGGGAGGGTT+TGG | 0.319049 | 2_3:-4590094 | None:intergenic |
| CCATAGGATAATTCCTTATC+AGG | 0.319710 | 2_3:-4593138 | None:intergenic |
| TGGCCTAGCCAATGCAAAAT+AGG | 0.319791 | 2_3:-4595453 | None:intergenic |
| TTTATATTGAAAGCCCAATA+TGG | 0.323905 | 2_3:-4595658 | None:intergenic |
| TTACACACGGGAGTTGCTTT+TGG | 0.327725 | 2_3:-4590230 | None:intergenic |
| GTTACGGCTGCTGCGGCTGA+TGG | 0.331848 | 2_3:+4590315 | Msa0273000:CDS |
| AAGATGGAAGGGGTGGTGTT+GGG | 0.331979 | 2_3:-4590129 | None:intergenic |
| GATATCTTGGGACACCTATT+AGG | 0.332888 | 2_3:-4595757 | None:intergenic |
| TCGGTGACTGGAATTGTCTT+CGG | 0.334359 | 2_3:-4590171 | None:intergenic |
| AGAGATTGACCCCAAGATAA+TGG | 0.339096 | 2_3:+4592238 | Msa0273000:CDS |
| TCCTTATCAGGTAGCGAATA+GGG | 0.339841 | 2_3:-4593126 | None:intergenic |
| TTACGGCTGCTGCGGCTGAT+GGG | 0.340335 | 2_3:+4590316 | Msa0273000:CDS |
| CAAAGATCCATCCATTATTC+AGG | 0.344540 | 2_3:-4595730 | None:intergenic |
| AAATAAAATCAGAGCGATTC+TGG | 0.348919 | 2_3:+4592126 | Msa0273000:CDS |
| TCTAAACTGTAGAGATATCT+TGG | 0.351180 | 2_3:-4595770 | None:intergenic |
| GAGGGGTGGGGAGAAGAGGG+AGG | 0.352256 | 2_3:-4590100 | None:intergenic |
| AACAAATGCAATATTATTGT+TGG | 0.358971 | 2_3:+4589921 | Msa0273000:five_prime_UTR |
| GTGGAGGGGTGGGGAGAAGA+GGG | 0.360405 | 2_3:-4590103 | None:intergenic |
| GTGGTGTTGGGGAGGTGGAG+GGG | 0.360541 | 2_3:-4590117 | None:intergenic |
| TGAAAATGCAAGAAGTCTAT+TGG | 0.360923 | 2_3:+4592064 | Msa0273000:CDS |
| TGGATCTTTGACATCCTAAT+AGG | 0.361958 | 2_3:+4595743 | Msa0273000:three_prime_UTR |
| TTTGAATCTCCCATTATCTT+GGG | 0.363447 | 2_3:-4592248 | None:intergenic |
| CCATTGCCGGAGAGTGAGAT+TGG | 0.374225 | 2_3:-4590008 | None:intergenic |
| GGCGGTGAGAGAGGTGGAAT+GGG | 0.379132 | 2_3:-4590065 | None:intergenic |
| AGATGGAAGGGGTGGTGTTG+GGG | 0.388790 | 2_3:-4590128 | None:intergenic |
| ACGTATTGACGATGACCTTT+AGG | 0.390074 | 2_3:+4591584 | Msa0273000:CDS |
| CATTATTCAGGACAGACATT+TGG | 0.392303 | 2_3:-4595718 | None:intergenic |
| TTCTCTGAGTGTCATAGAAA+AGG | 0.392570 | 2_3:+4589971 | Msa0273000:five_prime_UTR |
| GGTGGTGTTGGGGAGGTGGA+GGG | 0.392808 | 2_3:-4590118 | None:intergenic |
| CAAATGTCTGTCCTGAATAA+TGG | 0.395646 | 2_3:+4595719 | Msa0273000:three_prime_UTR |
| ATTGGACACATTAGCATACT+TGG | 0.398166 | 2_3:-4593169 | None:intergenic |
| TTCCTTATCAGGTAGCGAAT+AGG | 0.398500 | 2_3:-4593127 | None:intergenic |
| AGAAGGTACCAAACCTCTCT+TGG | 0.399362 | 2_3:-4591691 | None:intergenic |
| TCTTGTAGCAATCAGTGCCC+TGG | 0.408840 | 2_3:+4593911 | Msa0273000:CDS |
| TCTCTGAGTGTCATAGAAAA+GGG | 0.411731 | 2_3:+4589972 | Msa0273000:five_prime_UTR |
| TGATTTCCGTCAGGCGGTTA+CGG | 0.415343 | 2_3:+4590299 | Msa0273000:CDS |
| AATGAAATTGCAGGTTGGTT+TGG | 0.415481 | 2_3:+4593074 | Msa0273000:intron |
| TGGAAGGGGTGGTGTTGGGG+AGG | 0.417784 | 2_3:-4590125 | None:intergenic |
| TCCCTATTCGCTACCTGATA+AGG | 0.428790 | 2_3:+4593125 | Msa0273000:CDS |
| GAAGATGGAAGGGGTGGTGT+TGG | 0.435493 | 2_3:-4590130 | None:intergenic |
| GAGATTGACCCCAAGATAAT+GGG | 0.437241 | 2_3:+4592239 | Msa0273000:CDS |
| GATGTTACGGAAGCCATTGC+CGG | 0.449776 | 2_3:-4590021 | None:intergenic |
| TGGCGGTGAGAGAGGTGGAA+TGG | 0.450961 | 2_3:-4590066 | None:intergenic |
| GCTAAGCTGAAGAATGCTTA+TGG | 0.451886 | 2_3:+4594390 | Msa0273000:CDS |
| GATGGTATCGGTGCCTGGAT+TGG | 0.455626 | 2_3:+4594438 | Msa0273000:CDS |
| TGCATGATTAATATTTGAAT+CGG | 0.460926 | 2_3:+4595807 | Msa0273000:three_prime_UTR |
| AGTTGCTGATGAACATGTTC+AGG | 0.461769 | 2_3:+4590344 | Msa0273000:CDS |
| AGAGGGAGGGTTTGGTGATG+TGG | 0.462452 | 2_3:-4590086 | None:intergenic |
| GTGGTTCTGATTTCAGTGCT+TGG | 0.463729 | 2_3:+4592186 | Msa0273000:CDS |
| TAGAAGATGGTATCGGTGCC+TGG | 0.463909 | 2_3:+4594433 | Msa0273000:CDS |
| GAAACTCAAGGCATAACTTC+TGG | 0.466848 | 2_3:-4595540 | None:intergenic |
| TGTGGTGGTTGTTGATGTTA+CGG | 0.467786 | 2_3:-4590034 | None:intergenic |
| TCTAGTGAGGGGAAGATAGT+TGG | 0.469621 | 2_3:+4595161 | Msa0273000:CDS |
| TACGGCTGCTGCGGCTGATG+GGG | 0.470656 | 2_3:+4590317 | Msa0273000:CDS |
| GCCAATGCAAAATAGGCATC+TGG | 0.471034 | 2_3:-4595446 | None:intergenic |
| AGAACAGGAGATGATGAAGA+TGG | 0.477972 | 2_3:-4590145 | None:intergenic |
| TGGAACTGTTTCTACTCGAT+TGG | 0.483331 | 2_3:+4590422 | Msa0273000:CDS |
| GATAAAGTACCATTTGAGAG+TGG | 0.490362 | 2_3:-4592322 | None:intergenic |
| TGGAGCTGTTGATTTCCGTC+AGG | 0.491203 | 2_3:+4590290 | Msa0273000:CDS |
| TCAACCCTTGAGTCGGGTGG+CGG | 0.491477 | 2_3:+4595187 | Msa0273000:CDS |
| AGAAATTGTTGCTCGGTGAC+TGG | 0.492562 | 2_3:-4590183 | None:intergenic |
| GTATCGTTGAGCCAGGTCTC+AGG | 0.493108 | 2_3:+4595372 | Msa0273000:CDS |
| AGCAGGTAATTCTCCAATCC+AGG | 0.494274 | 2_3:-4594451 | None:intergenic |
| GAAGGTACCAAACCTCTCTT+GGG | 0.494677 | 2_3:-4591690 | None:intergenic |
| CTCCAAAACCACTTGCCTAA+AGG | 0.495524 | 2_3:-4591599 | None:intergenic |
| TGGTGATGTGGCGGTGAGAG+AGG | 0.495772 | 2_3:-4590074 | None:intergenic |
| GTGAGTATGTACCTGCATAT+CGG | 0.496032 | 2_3:+4592213 | Msa0273000:CDS |
| CCTCTAGCAAAGGAGCTGTA+TGG | 0.498698 | 2_3:+4595230 | Msa0273000:CDS |
| AGCTAGGAAAGTTAAAGAAA+AGG | 0.498775 | 2_3:+4591504 | Msa0273000:CDS |
| AGTGGTTTCAAAAGCATGAA+AGG | 0.499336 | 2_3:+4591985 | Msa0273000:CDS |
| CCTGATAAGGAATTATCCTA+TGG | 0.500484 | 2_3:+4593138 | Msa0273000:CDS |
| CTAAACTGTAGAGATATCTT+GGG | 0.501439 | 2_3:-4595769 | None:intergenic |
| CTTGTAGCAATCAGTGCCCT+GGG | 0.507436 | 2_3:+4593912 | Msa0273000:CDS |
| CCTGCTTCTTCTAGTGACCA+TGG | 0.508790 | 2_3:+4590402 | Msa0273000:CDS |
| GCAAACAACTTCTGCAAGCA+TGG | 0.508825 | 2_3:-4591895 | None:intergenic |
| TGCTAATGTGTCCAATAGAA+AGG | 0.510444 | 2_3:+4593176 | Msa0273000:CDS |
| ACGGCTGCTGCGGCTGATGG+GGG | 0.510847 | 2_3:+4590318 | Msa0273000:CDS |
| GGAAGAAGTCTTCAGAGAAT+AGG | 0.516072 | 2_3:+4592282 | Msa0273000:CDS |
| TGAACATGTTCAGGCTGGTA+TGG | 0.516758 | 2_3:+4590353 | Msa0273000:CDS |
| TTTGGCAGTTCTTACCAGCT+AGG | 0.517041 | 2_3:+4591488 | Msa0273000:intron |
| GCAGGCAATTTCCGATTCAT+CGG | 0.517710 | 2_3:+4590206 | Msa0273000:CDS |
| ATTAACCGCCACCCGACTCA+AGG | 0.518153 | 2_3:-4595192 | None:intergenic |
| AGCTGAAGAATGCTTATGGC+TGG | 0.523104 | 2_3:+4594394 | Msa0273000:CDS |
| TTTGGTAAATAGCCTACTAC+TGG | 0.524120 | 2_3:-4595855 | None:intergenic |
| GAGATTCAAAGTTTCAGGGC+TGG | 0.525006 | 2_3:+4592261 | Msa0273000:CDS |
| CATGAAAGGATACAATCAAA+AGG | 0.525188 | 2_3:+4591999 | Msa0273000:CDS |
| GTAGAAGTGGTTTCTTTCAG+TGG | 0.526154 | 2_3:+4591967 | Msa0273000:CDS |
| CAGGAGATGATGAAGATGGA+AGG | 0.526952 | 2_3:-4590141 | None:intergenic |
| CAAGAAACATGCCACTTGCA+AGG | 0.528805 | 2_3:-4593893 | None:intergenic |
| GATAAATCACGTAGTAGAAG+TGG | 0.529408 | 2_3:+4591954 | Msa0273000:CDS |
| CACCGAGCAACAATTTCTGC+AGG | 0.530531 | 2_3:+4590188 | Msa0273000:CDS |
| GAGGCAAACAAAACTGTCCC+AGG | 0.530584 | 2_3:-4593929 | None:intergenic |
| TCAATCTCTAACCGATATGC+AGG | 0.531737 | 2_3:-4592224 | None:intergenic |
| CCAATCTCACTCTCCGGCAA+TGG | 0.531971 | 2_3:+4590008 | Msa0273000:exon |
| AAATATCACTTAATGAAGGA+TGG | 0.533017 | 2_3:+4592089 | Msa0273000:CDS |
| GATGAAATCAAGGTAGAAGA+TGG | 0.536107 | 2_3:+4594420 | Msa0273000:CDS |
| AGGAGATGATGAAGATGGAA+GGG | 0.536462 | 2_3:-4590140 | None:intergenic |
| GACCTCACTGTCTTTCAACC+AGG | 0.538015 | 2_3:+4591637 | Msa0273000:CDS |
| GAGCTGAGAGTGAAAGATGC+AGG | 0.538668 | 2_3:-4591852 | None:intergenic |
| CATGGAGATAAGATATTCAT+CGG | 0.540829 | 2_3:-4591877 | None:intergenic |
| TGAAAGCCCAATATGGAGGA+AGG | 0.544322 | 2_3:-4595651 | None:intergenic |
| CAAGCAGGTATCGTTGAGCC+AGG | 0.546931 | 2_3:+4595365 | Msa0273000:intron |
| CATTGCCGGAGAGTGAGATT+GGG | 0.549127 | 2_3:-4590007 | None:intergenic |
| GGATAAATATCACTTAATGA+AGG | 0.551869 | 2_3:+4592085 | Msa0273000:CDS |
| TACACTTTCTACTTCTTCAG+AGG | 0.552604 | 2_3:+4594497 | Msa0273000:CDS |
| CCTGCTTACTTGAGAGGTGA+AGG | 0.553743 | 2_3:+4594468 | Msa0273000:CDS |
| TCAGGCTGGTATGGATGCTA+TGG | 0.554416 | 2_3:+4590362 | Msa0273000:CDS |
| AGAAGTCTTCAGAGAATAGG+TGG | 0.556099 | 2_3:+4592285 | Msa0273000:CDS |
| GCGGTGAGAGAGGTGGAATG+GGG | 0.558886 | 2_3:-4590064 | None:intergenic |
| GGAGATGATGAAGATGGAAG+GGG | 0.559012 | 2_3:-4590139 | None:intergenic |
| TTGAATCTCCCATTATCTTG+GGG | 0.559278 | 2_3:-4592247 | None:intergenic |
| TGGCTGGTCAGATGAAATCA+AGG | 0.561262 | 2_3:+4594410 | Msa0273000:CDS |
| GTAACTAGCAATATCTTGCA+TGG | 0.561790 | 2_3:-4594544 | None:intergenic |
| TCGGGTGGCGGTTAATCAGT+GGG | 0.563291 | 2_3:+4595199 | Msa0273000:CDS |
| GACGATGACCTTTAGGCAAG+TGG | 0.563970 | 2_3:+4591591 | Msa0273000:CDS |
| ATACTTGGCTGCCACTCCAT+AGG | 0.564764 | 2_3:-4593154 | None:intergenic |
| AAGAACCCAATCTCACTCTC+CGG | 0.565202 | 2_3:+4590002 | Msa0273000:five_prime_UTR |
| GTGGAATGGGGTGAAGAGTG+TGG | 0.566570 | 2_3:-4590052 | None:intergenic |
| ATGGGAGATTCAAAGTTTCA+GGG | 0.566907 | 2_3:+4592257 | Msa0273000:CDS |
| GGAAACACACTGCAGAACAT+AGG | 0.567955 | 2_3:+4593967 | Msa0273000:CDS |
| CCATACAGCTCCTTTGCTAG+AGG | 0.568282 | 2_3:-4595230 | None:intergenic |
| GAATTACCTGCTTACTTGAG+AGG | 0.568426 | 2_3:+4594462 | Msa0273000:CDS |
| GTCGGGTGGCGGTTAATCAG+TGG | 0.568673 | 2_3:+4595198 | Msa0273000:CDS |
| GGAAGGTGAATCCTGAGACC+TGG | 0.569127 | 2_3:-4595383 | None:intergenic |
| AAGAAACATGCCACTTGCAA+GGG | 0.573241 | 2_3:-4593892 | None:intergenic |
| TTGTTTGCCTCGTTTAAGCA+AGG | 0.573634 | 2_3:+4593941 | Msa0273000:CDS |
| CCATGGTCACTAGAAGAAGC+AGG | 0.574009 | 2_3:-4590402 | None:intergenic |
| AACATTAGATATGTACTATG+TGG | 0.574522 | 2_3:+4593101 | Msa0273000:CDS |
| AGGGGTGGGGAGAAGAGGGA+GGG | 0.575733 | 2_3:-4590099 | None:intergenic |
| TTGTCTCAACTCACTCTCGT+TGG | 0.578349 | 2_3:+4590270 | Msa0273000:CDS |
| CTCTGAGTGTCATAGAAAAG+GGG | 0.578789 | 2_3:+4589973 | Msa0273000:five_prime_UTR |
| CCTTCACCTCTCAAGTAAGC+AGG | 0.583915 | 2_3:-4594468 | None:intergenic |
| GCAAGATATTGCTAGTTACC+AGG | 0.585804 | 2_3:+4594548 | Msa0273000:CDS |
| TGCCTCGTTTAAGCAAGGAA+AGG | 0.586120 | 2_3:+4593946 | Msa0273000:CDS |
| TTCTCGAAAGTTCTTACACA+CGG | 0.586346 | 2_3:-4590243 | None:intergenic |
| GGGAGGGTTTGGTGATGTGG+CGG | 0.586613 | 2_3:-4590083 | None:intergenic |
| GGCTGATAATCCTCTAGCAA+AGG | 0.591914 | 2_3:+4595220 | Msa0273000:CDS |
| GAAAGCCCAATATGGAGGAA+GGG | 0.600546 | 2_3:-4595650 | None:intergenic |
| CTAGCAAAGGAGCTGTATGG+AGG | 0.605146 | 2_3:+4595233 | Msa0273000:CDS |
| AGCTGTTGATTTCCGTCAGG+CGG | 0.605265 | 2_3:+4590293 | Msa0273000:CDS |
| TTCCTTTCCTTGCTTAAACG+AGG | 0.606243 | 2_3:-4593948 | None:intergenic |
| TTGTCAGTCTCCCTTGCAAG+TGG | 0.607824 | 2_3:+4593882 | Msa0273000:CDS |
| CAGCAGCCGTAACCGCCTGA+CGG | 0.608289 | 2_3:-4590305 | None:intergenic |
| ATAAAGTACCATTTGAGAGT+GGG | 0.613790 | 2_3:-4592321 | None:intergenic |
| TTAACCGCCACCCGACTCAA+GGG | 0.615082 | 2_3:-4595191 | None:intergenic |
| TAGCAAAGGAGCTGTATGGA+GGG | 0.618186 | 2_3:+4595234 | Msa0273000:CDS |
| GAATGGGGTGAAGAGTGTGG+TGG | 0.618536 | 2_3:-4590049 | None:intergenic |
| TGATCTTGAAAACCCAAGAG+AGG | 0.623695 | 2_3:+4591678 | Msa0273000:CDS |
| TGCCTGCAGAAATTGTTGCT+CGG | 0.628032 | 2_3:-4590190 | None:intergenic |
| TGATGTGGCGGTGAGAGAGG+TGG | 0.628768 | 2_3:-4590071 | None:intergenic |
| GATGATGAAGATGGAAGGGG+TGG | 0.628970 | 2_3:-4590136 | None:intergenic |
| GTGACTGGAATTGTCTTCGG+GGG | 0.632552 | 2_3:-4590168 | None:intergenic |
| GAAGTCTTCAGAGAATAGGT+GGG | 0.633666 | 2_3:+4592286 | Msa0273000:CDS |
| ATCGAGTAGAAACAGTTCCA+TGG | 0.633831 | 2_3:-4590419 | None:intergenic |
| TAAAATCAGAGCGATTCTGG+TGG | 0.636600 | 2_3:+4592129 | Msa0273000:CDS |
| TGTCTGTCCTGAATAATGGA+TGG | 0.637427 | 2_3:+4595723 | Msa0273000:three_prime_UTR |
| GGTGACTGGAATTGTCTTCG+GGG | 0.638285 | 2_3:-4590169 | None:intergenic |
| ATCAAGGTAGAAGATGGTAT+CGG | 0.640470 | 2_3:+4594426 | Msa0273000:CDS |
| GCTGATGAACATGTTCAGGC+TGG | 0.647254 | 2_3:+4590348 | Msa0273000:CDS |
| TCTCGAAAGTTCTTACACAC+GGG | 0.653214 | 2_3:-4590242 | None:intergenic |
| GATACAATCAAAAGGTTCTG+CGG | 0.653952 | 2_3:+4592007 | Msa0273000:CDS |
| ATATTGAAAGCCCAATATGG+AGG | 0.654005 | 2_3:-4595655 | None:intergenic |
| TAAGGAATTATCCTATGGAG+TGG | 0.659350 | 2_3:+4593143 | Msa0273000:CDS |
| TCAGGCGGTTACGGCTGCTG+CGG | 0.661501 | 2_3:+4590308 | Msa0273000:CDS |
| AGGCAAACAAAACTGTCCCA+GGG | 0.673218 | 2_3:-4593928 | None:intergenic |
| CTCCTGGTTGAAAGACAGTG+AGG | 0.688767 | 2_3:-4591639 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTATTTTTTAATAAAACTA+TGG | - | chr2_3:4592462-4592481 | None:intergenic | 10.0% |
| !!! | TAGTTTTATTAAAAAATAGA+AGG | + | chr2_3:4592462-4592481 | Msa0273000:intron | 10.0% |
| !! | ATATTAAATGTAGAATATAT+AGG | + | chr2_3:4592742-4592761 | Msa0273000:intron | 10.0% |
| !! | TTTGAATTAAACAATTTCAT+AGG | - | chr2_3:4590461-4590480 | None:intergenic | 15.0% |
| !! | AAAAACTTATGATAAGTAAT+AGG | - | chr2_3:4590831-4590850 | None:intergenic | 15.0% |
| !!! | TACTTATCATAAGTTTTTTT+TGG | + | chr2_3:4590833-4590852 | Msa0273000:intron | 15.0% |
| !! | TTATATTTACTTAAATAGGT+CGG | + | chr2_3:4591315-4591334 | Msa0273000:intron | 15.0% |
| !! | TATGAAAAATTAGAGAAAAT+TGG | + | chr2_3:4592164-4592183 | Msa0273000:CDS | 15.0% |
| !! | AAACATCACTAAAAATATAA+AGG | - | chr2_3:4592365-4592384 | None:intergenic | 15.0% |
| !! | ATAATTATTATTAGTAGTTG+TGG | + | chr2_3:4592393-4592412 | Msa0273000:intron | 15.0% |
| !!! | AGTAAATAATTATTTAAGAC+AGG | - | chr2_3:4592666-4592685 | None:intergenic | 15.0% |
| !! | AATAATTATTTACTAGTCAA+AGG | + | chr2_3:4592672-4592691 | Msa0273000:intron | 15.0% |
| !! | AAACACTTAAATAAAAACAA+AGG | - | chr2_3:4593352-4593371 | None:intergenic | 15.0% |
| !! | AAAAGGAAAATAATTTAAGT+AGG | - | chr2_3:4593537-4593556 | None:intergenic | 15.0% |
| !! | AACAAACAATAAACATAAAA+AGG | - | chr2_3:4593554-4593573 | None:intergenic | 15.0% |
| !!! | TTTATGTTTATTGTTTGTTT+TGG | + | chr2_3:4593555-4593574 | Msa0273000:intron | 15.0% |
| !!! | ATTTTAATTTCATTAGCTAT+TGG | + | chr2_3:4594664-4594683 | Msa0273000:intron | 15.0% |
| !!! | GTATTTATTGATTTTCAAAT+AGG | - | chr2_3:4595069-4595088 | None:intergenic | 15.0% |
| !!! | AATTTTTTGTTCTCATAATT+CGG | + | chr2_3:4595090-4595109 | Msa0273000:intron | 15.0% |
| !!! | ATTTAAGGATAAATTTTTTC+AGG | + | chr2_3:4595515-4595534 | Msa0273000:three_prime_UTR | 15.0% |
| !! | AACAAATGCAATATTATTGT+TGG | + | chr2_3:4589921-4589940 | Msa0273000:five_prime_UTR | 20.0% |
| !!! | AAAATGAATCTCTATGATTT+TGG | + | chr2_3:4590478-4590497 | Msa0273000:intron | 20.0% |
| !!! | AAATGAATCTCTATGATTTT+GGG | + | chr2_3:4590479-4590498 | Msa0273000:intron | 20.0% |
| !! | TAAAATATCTAAATGTGTGA+TGG | - | chr2_3:4590687-4590706 | None:intergenic | 20.0% |
| !! | TATTTATGTAAAGTCTAACA+CGG | - | chr2_3:4590770-4590789 | None:intergenic | 20.0% |
| !! | TAACATGTTAAAAAAGTTGA+AGG | + | chr2_3:4590794-4590813 | Msa0273000:intron | 20.0% |
| !! | TCAATATGAAATACTGAAAT+AGG | - | chr2_3:4590911-4590930 | None:intergenic | 20.0% |
| !! | TCATACAAATAAATCAGAAT+TGG | - | chr2_3:4591087-4591106 | None:intergenic | 20.0% |
| !! | TACTCAAAATGTTTCAAAAA+CGG | - | chr2_3:4591390-4591409 | None:intergenic | 20.0% |
| !!! | AATTTCAAATGTTGTTGTTT+TGG | + | chr2_3:4591470-4591489 | Msa0273000:intron | 20.0% |
| !!! | TCTAATTTTTCATAAGATGA+AGG | - | chr2_3:4592158-4592177 | None:intergenic | 20.0% |
| !!! | AGGATTTAAAGTAGAAAAAA+TGG | + | chr2_3:4592762-4592781 | Msa0273000:intron | 20.0% |
| !! | TACACTGTATTTATATTGTA+TGG | - | chr2_3:4593044-4593063 | None:intergenic | 20.0% |
| !!! | TTCCATGTTTTTTTTTGTTT+TGG | + | chr2_3:4593754-4593773 | Msa0273000:intron | 20.0% |
| !!! | GTTACAAAATTTTGACAATA+CGG | - | chr2_3:4594578-4594597 | None:intergenic | 20.0% |
| !! | AACTTTGCAATAAAAAAACA+TGG | - | chr2_3:4594623-4594642 | None:intergenic | 20.0% |
| !!! | GATTAATCAATTGACTTTTT+GGG | - | chr2_3:4594795-4594814 | None:intergenic | 20.0% |
| !!! | TGATTAATCAATTGACTTTT+TGG | - | chr2_3:4594796-4594815 | None:intergenic | 20.0% |
| !!! | ATTTTTTGTTCTCATAATTC+GGG | + | chr2_3:4595091-4595110 | Msa0273000:intron | 20.0% |
| !! | TTTCAGGATTAATTGTTTAA+AGG | - | chr2_3:4595489-4595508 | None:intergenic | 20.0% |
| !! | ATTTAAAAAACTGAAACTCA+AGG | - | chr2_3:4595555-4595574 | None:intergenic | 20.0% |
| !!! | TGAGTTTCAGTTTTTTAAAT+AGG | + | chr2_3:4595555-4595574 | Msa0273000:three_prime_UTR | 20.0% |
| !! | CATCAAAAACTAAAAGATTT+AGG | - | chr2_3:4595584-4595603 | None:intergenic | 20.0% |
| !! | TGCATGATTAATATTTGAAT+CGG | + | chr2_3:4595807-4595826 | Msa0273000:three_prime_UTR | 20.0% |
| !! | TACTGGTAAAAAGAAAATAT+AGG | - | chr2_3:4595841-4595860 | None:intergenic | 20.0% |
| !! | AATGAATCTCTATGATTTTG+GGG | + | chr2_3:4590480-4590499 | Msa0273000:intron | 25.0% |
| !!! | GCATTTTAAAATGTACCTAT+AGG | + | chr2_3:4590539-4590558 | Msa0273000:intron | 25.0% |
| ! | TACAAAGTAACATAACCTAT+AGG | - | chr2_3:4590557-4590576 | None:intergenic | 25.0% |
| ! | AAAAATTGAGGATATAGTGA+TGG | + | chr2_3:4590627-4590646 | Msa0273000:intron | 25.0% |
| !! | TAGTGATGGAAATATATTTG+AGG | + | chr2_3:4590641-4590660 | Msa0273000:intron | 25.0% |
| ! | TAAATTACAAGTTAACCTGT+TGG | - | chr2_3:4590971-4590990 | None:intergenic | 25.0% |
| ! | TTCTAAGTAACATGACATAA+GGG | + | chr2_3:4591026-4591045 | Msa0273000:intron | 25.0% |
| !! | TATGATATGAATCTTTTCTG+AGG | + | chr2_3:4591102-4591121 | Msa0273000:intron | 25.0% |
| ! | ATAAGATCAGAATCTCTTAA+AGG | - | chr2_3:4591138-4591157 | None:intergenic | 25.0% |
| ! | TTGAAATTCAATCCTCAAAT+TGG | - | chr2_3:4591458-4591477 | None:intergenic | 25.0% |
| ! | AAGAAAATCAAAGAAACAGA+AGG | - | chr2_3:4591711-4591730 | None:intergenic | 25.0% |
| ! | GGATAAATATCACTTAATGA+AGG | + | chr2_3:4592085-4592104 | Msa0273000:CDS | 25.0% |
| ! | AAATATCACTTAATGAAGGA+TGG | + | chr2_3:4592089-4592108 | Msa0273000:CDS | 25.0% |
| ! | GAAAAATTAGAGAAAATTGG+TGG | + | chr2_3:4592167-4592186 | Msa0273000:CDS | 25.0% |
| !! | TATAATTAGACCTTTAGCTT+TGG | + | chr2_3:4592492-4592511 | Msa0273000:intron | 25.0% |
| ! | TATGAGAACAAAACTAATGA+AGG | + | chr2_3:4592616-4592635 | Msa0273000:intron | 25.0% |
| ! | ATGAGAACAAAACTAATGAA+GGG | + | chr2_3:4592617-4592636 | Msa0273000:intron | 25.0% |
| !! | GTAGAAAAAATGGTACATTT+TGG | + | chr2_3:4592772-4592791 | Msa0273000:intron | 25.0% |
| ! | TGTTTGGTTAAGTTTGATTA+TGG | + | chr2_3:4592887-4592906 | Msa0273000:intron | 25.0% |
| ! | TTTATATTGTATGGTATGCA+TGG | - | chr2_3:4593035-4593054 | None:intergenic | 25.0% |
| ! | TACAAGTTTAATGAAATTGC+AGG | + | chr2_3:4593065-4593084 | Msa0273000:intron | 25.0% |
| ! | AACATTAGATATGTACTATG+TGG | + | chr2_3:4593101-4593120 | Msa0273000:CDS | 25.0% |
| ! | AGAATTGATTACCTTTCTAT+TGG | - | chr2_3:4593190-4593209 | None:intergenic | 25.0% |
| ! | TTCAAAACTCACACTAAATT+TGG | + | chr2_3:4593223-4593242 | Msa0273000:intron | 25.0% |
| !! | TCAAAAGACTTGATTTTACA+TGG | + | chr2_3:4593249-4593268 | Msa0273000:intron | 25.0% |
| !! | TTTTATCAGACTGGAAAATT+TGG | - | chr2_3:4593314-4593333 | None:intergenic | 25.0% |
| ! | TTTGTATGAGAACAAACTTA+CGG | - | chr2_3:4593703-4593722 | None:intergenic | 25.0% |
| !! | TTGGGTTTTTGTAATATGAT+TGG | + | chr2_3:4593783-4593802 | Msa0273000:intron | 25.0% |
| !! | TATCTTGACATTTAGCTTAT+TGG | + | chr2_3:4593823-4593842 | Msa0273000:intron | 25.0% |
| ! | TTATTGGCATATTTGTTTGT+AGG | + | chr2_3:4593839-4593858 | Msa0273000:intron | 25.0% |
| ! | TATTGGCATATTTGTTTGTA+GGG | + | chr2_3:4593840-4593859 | Msa0273000:intron | 25.0% |
| ! | AAAAGAAAAAACAGCATGTA+AGG | - | chr2_3:4594154-4594173 | None:intergenic | 25.0% |
| !!! | TATGCATTGTTTCTTTCTTT+TGG | + | chr2_3:4594173-4594192 | Msa0273000:intron | 25.0% |
| !!! | CTTGAATTGAATCTTTTTCA+TGG | + | chr2_3:4594336-4594355 | Msa0273000:intron | 25.0% |
| !!! | ATTGAATCTTTTTCATGGAT+AGG | + | chr2_3:4594341-4594360 | Msa0273000:intron | 25.0% |
| ! | TTAAAGCATGACTAATCATT+AGG | + | chr2_3:4594641-4594660 | Msa0273000:intron | 25.0% |
| ! | TGACCAATTTAGTTATAAGA+GGG | + | chr2_3:4594919-4594938 | Msa0273000:intron | 25.0% |
| !!! | TCTACAACAGTAACTTTTTT+TGG | - | chr2_3:4595407-4595426 | None:intergenic | 25.0% |
| ! | ATCCTGAAATTGTAGATTTA+AGG | + | chr2_3:4595500-4595519 | Msa0273000:three_prime_UTR | 25.0% |
| ! | ATCCTTAAATCTACAATTTC+AGG | - | chr2_3:4595505-4595524 | None:intergenic | 25.0% |
| !!! | ATCTTTTAGTTTTTGATGCA+AGG | + | chr2_3:4595586-4595605 | Msa0273000:three_prime_UTR | 25.0% |
| ! | TTTATATTGAAAGCCCAATA+TGG | - | chr2_3:4595661-4595680 | None:intergenic | 25.0% |
| !! | TCTCTACAGTTTAGAATATT+TGG | + | chr2_3:4595778-4595797 | Msa0273000:three_prime_UTR | 25.0% |
| !! | ATTTTCTTTTTACCAGTAGT+AGG | + | chr2_3:4595843-4595862 | Msa0273000:three_prime_UTR | 25.0% |
| CATTAGAGCTGAAAAAATTG+AGG | + | chr2_3:4590615-4590634 | Msa0273000:intron | 30.0% | |
| ATAGCTATAAATTGACCAAC+AGG | + | chr2_3:4590953-4590972 | Msa0273000:intron | 30.0% | |
| CTTCTAAGTAACATGACATA+AGG | + | chr2_3:4591025-4591044 | Msa0273000:intron | 30.0% | |
| TCTAAGTAACATGACATAAG+GGG | + | chr2_3:4591027-4591046 | Msa0273000:intron | 30.0% | |
| AATTAGAATAGGTCAATCCA+TGG | - | chr2_3:4591341-4591360 | None:intergenic | 30.0% | |
| CTATTCTAATTCGTAGTTGT+GGG | + | chr2_3:4591350-4591369 | Msa0273000:intron | 30.0% | |
| GTAAATTAATGTGCTGTCTT+TGG | + | chr2_3:4591407-4591426 | Msa0273000:intron | 30.0% | |
| !! | TTTTCTTTAACTTTCCTAGC+TGG | - | chr2_3:4591505-4591524 | None:intergenic | 30.0% |
| AGCTAGGAAAGTTAAAGAAA+AGG | + | chr2_3:4591504-4591523 | Msa0273000:CDS | 30.0% | |
| ! | TATTTTCGAACACTACTTCT+AGG | + | chr2_3:4591560-4591579 | Msa0273000:CDS | 30.0% |
| TTTATGCATTTCATATGAGC+AGG | + | chr2_3:4591827-4591846 | Msa0273000:intron | 30.0% | |
| CATGGAGATAAGATATTCAT+CGG | - | chr2_3:4591880-4591899 | None:intergenic | 30.0% | |
| !!! | GAAATTGTTTTTGAGTGCTT+TGG | - | chr2_3:4591932-4591951 | None:intergenic | 30.0% |
| CATGAAAGGATACAATCAAA+AGG | + | chr2_3:4591999-4592018 | Msa0273000:CDS | 30.0% | |
| TGAAAATGCAAGAAGTCTAT+TGG | + | chr2_3:4592064-4592083 | Msa0273000:CDS | 30.0% | |
| !!! | CGCTCTGATTTTATTTTTAC+AGG | - | chr2_3:4592122-4592141 | None:intergenic | 30.0% |
| AAATAAAATCAGAGCGATTC+TGG | + | chr2_3:4592126-4592145 | Msa0273000:CDS | 30.0% | |
| TTTGAATCTCCCATTATCTT+GGG | - | chr2_3:4592251-4592270 | None:intergenic | 30.0% | |
| ! | ATAAAGTACCATTTGAGAGT+GGG | - | chr2_3:4592324-4592343 | None:intergenic | 30.0% |
| TATTTAAGTAAGCCAAGTAG+TGG | + | chr2_3:4592422-4592441 | Msa0273000:intron | 30.0% | |
| GAATATTTGACCAAAGCTAA+AGG | - | chr2_3:4592505-4592524 | None:intergenic | 30.0% | |
| TCATGTTTATGAGTTGTTAG+TGG | + | chr2_3:4592523-4592542 | Msa0273000:intron | 30.0% | |
| TGAGAACAAAACTAATGAAG+GGG | + | chr2_3:4592618-4592637 | Msa0273000:intron | 30.0% | |
| AAACATAGAAGTTAGCACTA+AGG | - | chr2_3:4592867-4592886 | None:intergenic | 30.0% | |
| !! | GCTAACTTCTATGTTTTGTT+TGG | + | chr2_3:4592871-4592890 | Msa0273000:intron | 30.0% |
| TTGGTTAAGTTTGATTATGG+TGG | + | chr2_3:4592890-4592909 | Msa0273000:intron | 30.0% | |
| AGTTTAATGAAATTGCAGGT+TGG | + | chr2_3:4593069-4593088 | Msa0273000:intron | 30.0% | |
| ACATGGTATGATATAATCCA+AGG | + | chr2_3:4593266-4593285 | Msa0273000:intron | 30.0% | |
| CATGGTATGATATAATCCAA+GGG | + | chr2_3:4593267-4593286 | Msa0273000:intron | 30.0% | |
| !!! | TGTTGCTTTTTTTATCAGAC+TGG | - | chr2_3:4593323-4593342 | None:intergenic | 30.0% |
| AATTTCAACTCTCTTAAGTG+TGG | + | chr2_3:4593374-4593393 | Msa0273000:intron | 30.0% | |
| ATTTCAACTCTCTTAAGTGT+GGG | + | chr2_3:4593375-4593394 | Msa0273000:intron | 30.0% | |
| CTCTTTATTGTTCAAGATCA+TGG | + | chr2_3:4593463-4593482 | Msa0273000:intron | 30.0% | |
| ! | AGTTTGTTCTCATACAAACA+AGG | + | chr2_3:4593705-4593724 | Msa0273000:intron | 30.0% |
| GGCCAAAACAAAAAAAAACA+TGG | - | chr2_3:4593759-4593778 | None:intergenic | 30.0% | |
| !!! | GTTTTTTTTTGTTTTGGCCT+TGG | + | chr2_3:4593760-4593779 | Msa0273000:intron | 30.0% |
| ATATTACAAAAACCCAACCA+AGG | - | chr2_3:4593780-4593799 | None:intergenic | 30.0% | |
| ! | TAATATGATTGGTGACTGTT+GGG | + | chr2_3:4593794-4593813 | Msa0273000:intron | 30.0% |
| ATTGGCATATTTGTTTGTAG+GGG | + | chr2_3:4593841-4593860 | Msa0273000:intron | 30.0% | |
| ! | TGACTTTTTGGATACAACAA+AGG | + | chr2_3:4594022-4594041 | Msa0273000:CDS | 30.0% |
| !!! | TTTCTTTTGGAACTTCCATA+TGG | + | chr2_3:4594186-4594205 | Msa0273000:intron | 30.0% |
| ! | TTTGCAGTGTTATTCAACTT+AGG | + | chr2_3:4594730-4594749 | Msa0273000:intron | 30.0% |
| CCTATATTAATCCTCATTTG+AGG | - | chr2_3:4594772-4594791 | None:intergenic | 30.0% | |
| CCTCAAATGAGGATTAATAT+AGG | + | chr2_3:4594769-4594788 | Msa0273000:intron | 30.0% | |
| AAGAGAGAAATAATATGACG+TGG | + | chr2_3:4594862-4594881 | Msa0273000:intron | 30.0% | |
| GTGACCAATTTAGTTATAAG+AGG | + | chr2_3:4594918-4594937 | Msa0273000:intron | 30.0% | |
| TCTCCCTCTTATAACTAAAT+TGG | - | chr2_3:4594925-4594944 | None:intergenic | 30.0% | |
| GTATTGAGTATTCTTGTAGT+TGG | + | chr2_3:4594960-4594979 | Msa0273000:intron | 30.0% | |
| !! | CATTTGCTTTTGGATTACTA+GGG | + | chr2_3:4595026-4595045 | Msa0273000:intron | 30.0% |
| CTGAATTTCAAACAATTGCA+AGG | - | chr2_3:4595132-4595151 | None:intergenic | 30.0% | |
| ! | CTTGCAATTGTTTGAAATTC+AGG | + | chr2_3:4595130-4595149 | Msa0273000:intron | 30.0% |
| CTTGGATTTATTTATCAAGC+AGG | + | chr2_3:4595350-4595369 | Msa0273000:intron | 30.0% | |
| !!! | CAACAGTAACTTTTTTTGGA+AGG | - | chr2_3:4595403-4595422 | None:intergenic | 30.0% |
| TGTTTAAAGGATCACTGATA+TGG | - | chr2_3:4595476-4595495 | None:intergenic | 30.0% | |
| ! | TTGATGCAAGGTAATCTTTT+AGG | + | chr2_3:4595598-4595617 | Msa0273000:three_prime_UTR | 30.0% |
| CTAAACTGTAGAGATATCTT+GGG | - | chr2_3:4595772-4595791 | None:intergenic | 30.0% | |
| TCTAAACTGTAGAGATATCT+TGG | - | chr2_3:4595773-4595792 | None:intergenic | 30.0% | |
| TTCTCTGAGTGTCATAGAAA+AGG | + | chr2_3:4589971-4589990 | Msa0273000:five_prime_UTR | 35.0% | |
| TCTCTGAGTGTCATAGAAAA+GGG | + | chr2_3:4589972-4589991 | Msa0273000:five_prime_UTR | 35.0% | |
| TTCTCGAAAGTTCTTACACA+CGG | - | chr2_3:4590246-4590265 | None:intergenic | 35.0% | |
| ACTAGAAGAAGCAGGAAAAA+CGG | - | chr2_3:4590397-4590416 | None:intergenic | 35.0% | |
| TGAACTATGACGAAATTGAG+TGG | + | chr2_3:4590592-4590611 | Msa0273000:intron | 35.0% | |
| !! | AGCTTTTTGAAAGCCTGATA+TGG | + | chr2_3:4590864-4590883 | Msa0273000:intron | 35.0% |
| ACATAAGGGGAGAAATAGAT+AGG | + | chr2_3:4591040-4591059 | Msa0273000:intron | 35.0% | |
| CCACAACTACGAATTAGAAT+AGG | - | chr2_3:4591352-4591371 | None:intergenic | 35.0% | |
| CCTATTCTAATTCGTAGTTG+TGG | + | chr2_3:4591349-4591368 | Msa0273000:intron | 35.0% | |
| TATTATGATTTCTGTCCTGC+AGG | + | chr2_3:4591775-4591794 | Msa0273000:intron | 35.0% | |
| GATAAATCACGTAGTAGAAG+TGG | + | chr2_3:4591954-4591973 | Msa0273000:CDS | 35.0% | |
| ! | AGTGGTTTCAAAAGCATGAA+AGG | + | chr2_3:4591985-4592004 | Msa0273000:CDS | 35.0% |
| GATACAATCAAAAGGTTCTG+CGG | + | chr2_3:4592007-4592026 | Msa0273000:CDS | 35.0% | |
| TTGAATCTCCCATTATCTTG+GGG | - | chr2_3:4592250-4592269 | None:intergenic | 35.0% | |
| CTTTGAATCTCCCATTATCT+TGG | - | chr2_3:4592252-4592271 | None:intergenic | 35.0% | |
| AATGGGAGATTCAAAGTTTC+AGG | + | chr2_3:4592256-4592275 | Msa0273000:CDS | 35.0% | |
| ATGGGAGATTCAAAGTTTCA+GGG | + | chr2_3:4592257-4592276 | Msa0273000:CDS | 35.0% | |
| ! | GATAAAGTACCATTTGAGAG+TGG | - | chr2_3:4592325-4592344 | None:intergenic | 35.0% |
| AATATAAAGGTCGACGCAAA+AGG | - | chr2_3:4592352-4592371 | None:intergenic | 35.0% | |
| AAAAGATGAAGTCCACTACT+TGG | - | chr2_3:4592437-4592456 | None:intergenic | 35.0% | |
| !! | CTTACGTTTAGTTCTCTTTG+AGG | - | chr2_3:4592803-4592822 | None:intergenic | 35.0% |
| CAAAGAGAACTAAACGTAAG+AGG | + | chr2_3:4592803-4592822 | Msa0273000:intron | 35.0% | |
| AGAGGTTATTCTGTTCCATT+TGG | + | chr2_3:4592821-4592840 | Msa0273000:intron | 35.0% | |
| CTACACTCTATGGTATAGAA+GGG | + | chr2_3:4592964-4592983 | Msa0273000:intron | 35.0% | |
| ! | GGTATTGCGACATAACTTTT+TGG | - | chr2_3:4593014-4593033 | None:intergenic | 35.0% |
| !! | AATGAAATTGCAGGTTGGTT+TGG | + | chr2_3:4593074-4593093 | Msa0273000:intron | 35.0% |
| CCATAGGATAATTCCTTATC+AGG | - | chr2_3:4593141-4593160 | None:intergenic | 35.0% | |
| CCTGATAAGGAATTATCCTA+TGG | + | chr2_3:4593138-4593157 | Msa0273000:CDS | 35.0% | |
| TAAGGAATTATCCTATGGAG+TGG | + | chr2_3:4593143-4593162 | Msa0273000:CDS | 35.0% | |
| ATTGGACACATTAGCATACT+TGG | - | chr2_3:4593172-4593191 | None:intergenic | 35.0% | |
| TGCTAATGTGTCCAATAGAA+AGG | + | chr2_3:4593176-4593195 | Msa0273000:CDS | 35.0% | |
| AGAGTCTTTCAAATGTCAAC+AGG | + | chr2_3:4593501-4593520 | Msa0273000:intron | 35.0% | |
| ! | TCTTTTGTGCCTCAAAAAAG+AGG | + | chr2_3:4593597-4593616 | Msa0273000:intron | 35.0% |
| !! | TAGTTTTCGCCTCTTTTTTG+AGG | - | chr2_3:4593609-4593628 | None:intergenic | 35.0% |
| !!! | TTTTTTGTTTTGGCCTTGGT+TGG | + | chr2_3:4593764-4593783 | Msa0273000:intron | 35.0% |
| !!! | TTTTTGTTTTGGCCTTGGTT+GGG | + | chr2_3:4593765-4593784 | Msa0273000:intron | 35.0% |
| ! | GTAATATGATTGGTGACTGT+TGG | + | chr2_3:4593793-4593812 | Msa0273000:intron | 35.0% |
| ! | CAACGTTATGCATGACTTTT+TGG | + | chr2_3:4594010-4594029 | Msa0273000:CDS | 35.0% |
| !! | ATTTGCATGCTGTTTCAGTA+TGG | + | chr2_3:4594098-4594117 | Msa0273000:intron | 35.0% |
| !! | TTTGCATGCTGTTTCAGTAT+GGG | + | chr2_3:4594099-4594118 | Msa0273000:intron | 35.0% |
| TAACCTTTGAACAGACCATA+TGG | - | chr2_3:4594204-4594223 | None:intergenic | 35.0% | |
| GTTATACGTCATGATGAGTA+GGG | + | chr2_3:4594220-4594239 | Msa0273000:intron | 35.0% | |
| ACTTCACAGACAGAAATAGA+AGG | - | chr2_3:4594311-4594330 | None:intergenic | 35.0% | |
| !! | GAATCTTTTTCATGGATAGG+TGG | + | chr2_3:4594344-4594363 | Msa0273000:intron | 35.0% |
| GATGAAATCAAGGTAGAAGA+TGG | + | chr2_3:4594420-4594439 | Msa0273000:CDS | 35.0% | |
| ATCAAGGTAGAAGATGGTAT+CGG | + | chr2_3:4594426-4594445 | Msa0273000:CDS | 35.0% | |
| TACACTTTCTACTTCTTCAG+AGG | + | chr2_3:4594497-4594516 | Msa0273000:CDS | 35.0% | |
| GTAACTAGCAATATCTTGCA+TGG | - | chr2_3:4594547-4594566 | None:intergenic | 35.0% | |
| ! | ACAATTTTTCCTCCATGTAC+GGG | - | chr2_3:4594695-4594714 | None:intergenic | 35.0% |
| ! | GACAATTTTTCCTCCATGTA+CGG | - | chr2_3:4594696-4594715 | None:intergenic | 35.0% |
| AACTTAGGTTATGTTGTGCT+TGG | + | chr2_3:4594745-4594764 | Msa0273000:intron | 35.0% | |
| AGAAATAATATGACGTGGCA+GGG | + | chr2_3:4594867-4594886 | Msa0273000:intron | 35.0% | |
| !! | TTCTTGTAGTTGGTAGTAAC+TGG | + | chr2_3:4594970-4594989 | Msa0273000:intron | 35.0% |
| !! | GCATTTGCTTTTGGATTACT+AGG | + | chr2_3:4595025-4595044 | Msa0273000:intron | 35.0% |
| AAAGCAATTAGAAGCTACCT+GGG | - | chr2_3:4595271-4595290 | None:intergenic | 35.0% | |
| AAAAGCAATTAGAAGCTACC+TGG | - | chr2_3:4595272-4595291 | None:intergenic | 35.0% | |
| AGAAGAGTTAACAGCTTCAA+TGG | - | chr2_3:4595327-4595346 | None:intergenic | 35.0% | |
| ! | CAAGGTAATCTTTTAGGCTT+TGG | + | chr2_3:4595604-4595623 | Msa0273000:three_prime_UTR | 35.0% |
| AAAATCCCTTCCTCCATATT+GGG | + | chr2_3:4595645-4595664 | Msa0273000:three_prime_UTR | 35.0% | |
| ATATTGAAAGCCCAATATGG+AGG | - | chr2_3:4595658-4595677 | None:intergenic | 35.0% | |
| CATTATTCAGGACAGACATT+TGG | - | chr2_3:4595721-4595740 | None:intergenic | 35.0% | |
| CAAATGTCTGTCCTGAATAA+TGG | + | chr2_3:4595719-4595738 | Msa0273000:three_prime_UTR | 35.0% | |
| CAAAGATCCATCCATTATTC+AGG | - | chr2_3:4595733-4595752 | None:intergenic | 35.0% | |
| TGGATCTTTGACATCCTAAT+AGG | + | chr2_3:4595743-4595762 | Msa0273000:three_prime_UTR | 35.0% | |
| CTCTGAGTGTCATAGAAAAG+GGG | + | chr2_3:4589973-4589992 | Msa0273000:five_prime_UTR | 40.0% | |
| TGTGGTGGTTGTTGATGTTA+CGG | - | chr2_3:4590037-4590056 | None:intergenic | 40.0% | |
| AGGAGATGATGAAGATGGAA+GGG | - | chr2_3:4590143-4590162 | None:intergenic | 40.0% | |
| AGAACAGGAGATGATGAAGA+TGG | - | chr2_3:4590148-4590167 | None:intergenic | 40.0% | |
| !! | TTGCTTTTGGTCCGATGAAT+CGG | - | chr2_3:4590220-4590239 | None:intergenic | 40.0% |
| TCTCGAAAGTTCTTACACAC+GGG | - | chr2_3:4590245-4590264 | None:intergenic | 40.0% | |
| AGTTGCTGATGAACATGTTC+AGG | + | chr2_3:4590344-4590363 | Msa0273000:CDS | 40.0% | |
| ATCGAGTAGAAACAGTTCCA+TGG | - | chr2_3:4590422-4590441 | None:intergenic | 40.0% | |
| !! | TGGAACTGTTTCTACTCGAT+TGG | + | chr2_3:4590422-4590441 | Msa0273000:CDS | 40.0% |
| ATGATCGTAGACTTCAGTTG+TGG | + | chr2_3:4590720-4590739 | Msa0273000:intron | 40.0% | |
| TGATCGTAGACTTCAGTTGT+GGG | + | chr2_3:4590721-4590740 | Msa0273000:intron | 40.0% | |
| GTATGTCAACAGACCATATC+AGG | - | chr2_3:4590880-4590899 | None:intergenic | 40.0% | |
| ! | GTCATGTTACTTAGAAGCAG+TGG | - | chr2_3:4591022-4591041 | None:intergenic | 40.0% |
| AAGGGGAGAAATAGATAGGA+CGG | + | chr2_3:4591044-4591063 | Msa0273000:intron | 40.0% | |
| TTACTTAAATAGGTCGGCCA+TGG | + | chr2_3:4591321-4591340 | Msa0273000:intron | 40.0% | |
| CTTCTAGCAATGCCAATTTG+AGG | + | chr2_3:4591443-4591462 | Msa0273000:intron | 40.0% | |
| ! | ACGTATTGACGATGACCTTT+AGG | + | chr2_3:4591584-4591603 | Msa0273000:CDS | 40.0% |
| !!! | AAGTGGTTTTGGAGCATGTT+TGG | + | chr2_3:4591608-4591627 | Msa0273000:CDS | 40.0% |
| ACCAGGAGAAGAACGAAAAA+TGG | + | chr2_3:4591654-4591673 | Msa0273000:CDS | 40.0% | |
| !! | TCCATTTTTCGTTCTTCTCC+TGG | - | chr2_3:4591658-4591677 | None:intergenic | 40.0% |
| TGATCTTGAAAACCCAAGAG+AGG | + | chr2_3:4591678-4591697 | Msa0273000:CDS | 40.0% | |
| TTGAAAACCCAAGAGAGGTT+TGG | + | chr2_3:4591683-4591702 | Msa0273000:intron | 40.0% | |
| GTAGAAGTGGTTTCTTTCAG+TGG | + | chr2_3:4591967-4591986 | Msa0273000:CDS | 40.0% | |
| TAAAATCAGAGCGATTCTGG+TGG | + | chr2_3:4592129-4592148 | Msa0273000:CDS | 40.0% | |
| GTGAGTATGTACCTGCATAT+CGG | + | chr2_3:4592213-4592232 | Msa0273000:CDS | 40.0% | |
| TCAATCTCTAACCGATATGC+AGG | - | chr2_3:4592227-4592246 | None:intergenic | 40.0% | |
| AGAGATTGACCCCAAGATAA+TGG | + | chr2_3:4592238-4592257 | Msa0273000:CDS | 40.0% | |
| GAGATTGACCCCAAGATAAT+GGG | + | chr2_3:4592239-4592258 | Msa0273000:CDS | 40.0% | |
| GGAAGAAGTCTTCAGAGAAT+AGG | + | chr2_3:4592282-4592301 | Msa0273000:CDS | 40.0% | |
| AGAAGTCTTCAGAGAATAGG+TGG | + | chr2_3:4592285-4592304 | Msa0273000:CDS | 40.0% | |
| GAAGTCTTCAGAGAATAGGT+GGG | + | chr2_3:4592286-4592305 | Msa0273000:CDS | 40.0% | |
| ! | TCTTTTGACCCACTCTCAAA+TGG | + | chr2_3:4592313-4592332 | Msa0273000:CDS | 40.0% |
| AGCAACTTGAAGTGAGAAAG+AGG | - | chr2_3:4592554-4592573 | None:intergenic | 40.0% | |
| ATACCCTTACTTCGAAGGAA+CGG | - | chr2_3:4592591-4592610 | None:intergenic | 40.0% | |
| TGCATATACCCTTACTTCGA+AGG | - | chr2_3:4592596-4592615 | None:intergenic | 40.0% | |
| TAGCACTAAGGTAGTGTGTT+TGG | - | chr2_3:4592855-4592874 | None:intergenic | 40.0% | |
| TGCTTATTGCCTACACTCTA+TGG | + | chr2_3:4592954-4592973 | Msa0273000:intron | 40.0% | |
| CCTTCTATACCATAGAGTGT+AGG | - | chr2_3:4592966-4592985 | None:intergenic | 40.0% | |
| CCTACACTCTATGGTATAGA+AGG | + | chr2_3:4592963-4592982 | Msa0273000:intron | 40.0% | |
| GGTGTACTGCATAGTAATCA+GGG | + | chr2_3:4592985-4593004 | Msa0273000:intron | 40.0% | |
| TCCTTATCAGGTAGCGAATA+GGG | - | chr2_3:4593129-4593148 | None:intergenic | 40.0% | |
| TTCCTTATCAGGTAGCGAAT+AGG | - | chr2_3:4593130-4593149 | None:intergenic | 40.0% | |
| TGGGAGGAAGATCAAACTAT+GGG | + | chr2_3:4593394-4593413 | Msa0273000:intron | 40.0% | |
| TTTGACACACAAAGACAGCT+TGG | - | chr2_3:4593420-4593439 | None:intergenic | 40.0% | |
| ! | AAGAAACATGCCACTTGCAA+GGG | - | chr2_3:4593895-4593914 | None:intergenic | 40.0% |
| TTGTTTGCCTCGTTTAAGCA+AGG | + | chr2_3:4593941-4593960 | Msa0273000:CDS | 40.0% | |
| TTCCTTTCCTTGCTTAAACG+AGG | - | chr2_3:4593951-4593970 | None:intergenic | 40.0% | |
| CTTCCATATGGTCTGTTCAA+AGG | + | chr2_3:4594198-4594217 | Msa0273000:intron | 40.0% | |
| GGTTATACGTCATGATGAGT+AGG | + | chr2_3:4594219-4594238 | Msa0273000:intron | 40.0% | |
| ACAGACAGAAATAGAAGGCA+CGG | - | chr2_3:4594306-4594325 | None:intergenic | 40.0% | |
| GCTAAGCTGAAGAATGCTTA+TGG | + | chr2_3:4594390-4594409 | Msa0273000:CDS | 40.0% | |
| GAATTACCTGCTTACTTGAG+AGG | + | chr2_3:4594462-4594481 | Msa0273000:CDS | 40.0% | |
| GCAAGATATTGCTAGTTACC+AGG | + | chr2_3:4594548-4594567 | Msa0273000:CDS | 40.0% | |
| !! | TTTTGACAATACGGAGTACC+TGG | - | chr2_3:4594569-4594588 | None:intergenic | 40.0% |
| TAACCAACACACTGCATCTT+TGG | + | chr2_3:4594594-4594613 | Msa0273000:intron | 40.0% | |
| AGTTACGCAAGTCTATCATG+TGG | + | chr2_3:4594815-4594834 | Msa0273000:intron | 40.0% | |
| GAGAAATAATATGACGTGGC+AGG | + | chr2_3:4594866-4594885 | Msa0273000:intron | 40.0% | |
| TATAAGAGGGAGAAAGAGAG+TGG | + | chr2_3:4594932-4594951 | Msa0273000:intron | 40.0% | |
| ATAAGAGGGAGAAAGAGAGT+GGG | + | chr2_3:4594933-4594952 | Msa0273000:intron | 40.0% | |
| !! | TGTAGTTGGTAGTAACTGGT+TGG | + | chr2_3:4594974-4594993 | Msa0273000:intron | 40.0% |
| !! | GTAGTTGGTAGTAACTGGTT+GGG | + | chr2_3:4594975-4594994 | Msa0273000:intron | 40.0% |
| !! | TAGTTGGTAGTAACTGGTTG+GGG | + | chr2_3:4594976-4594995 | Msa0273000:intron | 40.0% |
| AGAGTTTCATGTCTTCTCTG+AGG | + | chr2_3:4595001-4595020 | Msa0273000:intron | 40.0% | |
| ! | AATTCGGGTTCCTAACATGT+TGG | + | chr2_3:4595106-4595125 | Msa0273000:intron | 40.0% |
| AATTGCAAGGCCAACATGTT+AGG | - | chr2_3:4595119-4595138 | None:intergenic | 40.0% | |
| ! | TCAGGTAGTTTTCTCTAGTG+AGG | + | chr2_3:4595148-4595167 | Msa0273000:intron | 40.0% |
| ! | CAGGTAGTTTTCTCTAGTGA+GGG | + | chr2_3:4595149-4595168 | Msa0273000:intron | 40.0% |
| ! | AGGTAGTTTTCTCTAGTGAG+GGG | + | chr2_3:4595150-4595169 | Msa0273000:intron | 40.0% |
| !! | TTGGTTTTCAACCCTTGAGT+CGG | + | chr2_3:4595180-4595199 | Msa0273000:CDS | 40.0% |
| AAGCAATTAGAAGCTACCTG+GGG | - | chr2_3:4595270-4595289 | None:intergenic | 40.0% | |
| GCTGTTAACTCTTCTTCTCT+TGG | + | chr2_3:4595332-4595351 | Msa0273000:intron | 40.0% | |
| ! | ACCAGATGCCTATTTTGCAT+TGG | + | chr2_3:4595445-4595464 | Msa0273000:CDS | 40.0% |
| !!! | ATGCCTATTTTGCATTGGCT+AGG | + | chr2_3:4595450-4595469 | Msa0273000:CDS | 40.0% |
| GAAACTCAAGGCATAACTTC+TGG | - | chr2_3:4595543-4595562 | None:intergenic | 40.0% | |
| GAAAATCCCTTCCTCCATAT+TGG | + | chr2_3:4595644-4595663 | Msa0273000:three_prime_UTR | 40.0% | |
| !!! | AGGACAGACATTTGGCTTTT+CGG | - | chr2_3:4595713-4595732 | None:intergenic | 40.0% |
| ! | TGTCTGTCCTGAATAATGGA+TGG | + | chr2_3:4595723-4595742 | Msa0273000:three_prime_UTR | 40.0% |
| GATATCTTGGGACACCTATT+AGG | - | chr2_3:4595760-4595779 | None:intergenic | 40.0% | |
| AAGAACCCAATCTCACTCTC+CGG | + | chr2_3:4590002-4590021 | Msa0273000:five_prime_UTR | 45.0% | |
| GGAGATGATGAAGATGGAAG+GGG | - | chr2_3:4590142-4590161 | None:intergenic | 45.0% | |
| CAGGAGATGATGAAGATGGA+AGG | - | chr2_3:4590144-4590163 | None:intergenic | 45.0% | |
| TCGGTGACTGGAATTGTCTT+CGG | - | chr2_3:4590174-4590193 | None:intergenic | 45.0% | |
| ! | AGAAATTGTTGCTCGGTGAC+TGG | - | chr2_3:4590186-4590205 | None:intergenic | 45.0% |
| TGCCTGCAGAAATTGTTGCT+CGG | - | chr2_3:4590193-4590212 | None:intergenic | 45.0% | |
| GCAGGCAATTTCCGATTCAT+CGG | + | chr2_3:4590206-4590225 | Msa0273000:CDS | 45.0% | |
| !! | TTACACACGGGAGTTGCTTT+TGG | - | chr2_3:4590233-4590252 | None:intergenic | 45.0% |
| TTGTCTCAACTCACTCTCGT+TGG | + | chr2_3:4590270-4590289 | Msa0273000:CDS | 45.0% | |
| TGAACATGTTCAGGCTGGTA+TGG | + | chr2_3:4590353-4590372 | Msa0273000:CDS | 45.0% | |
| GTAGACTTCAGTTGTGGGTA+GGG | + | chr2_3:4590726-4590745 | Msa0273000:intron | 45.0% | |
| TAGACTTCAGTTGTGGGTAG+GGG | + | chr2_3:4590727-4590746 | Msa0273000:intron | 45.0% | |
| GGCTTTCAAAAAGCTCGTGT+AGG | - | chr2_3:4590859-4590878 | None:intergenic | 45.0% | |
| AGGGGAGAAATAGATAGGAC+GGG | + | chr2_3:4591045-4591064 | Msa0273000:intron | 45.0% | |
| TTTGGCAGTTCTTACCAGCT+AGG | + | chr2_3:4591488-4591507 | Msa0273000:intron | 45.0% | |
| ! | GACCTTTAGGCAAGTGGTTT+TGG | + | chr2_3:4591597-4591616 | Msa0273000:CDS | 45.0% |
| CTCCAAAACCACTTGCCTAA+AGG | - | chr2_3:4591602-4591621 | None:intergenic | 45.0% | |
| !! | GAAGGTACCAAACCTCTCTT+GGG | - | chr2_3:4591693-4591712 | None:intergenic | 45.0% |
| !! | AGAAGGTACCAAACCTCTCT+TGG | - | chr2_3:4591694-4591713 | None:intergenic | 45.0% |
| AACCGAACGTATCAGTGTCA+GGG | - | chr2_3:4591804-4591823 | None:intergenic | 45.0% | |
| GCAAACAACTTCTGCAAGCA+TGG | - | chr2_3:4591898-4591917 | None:intergenic | 45.0% | |
| !! | GTGGTTCTGATTTCAGTGCT+TGG | + | chr2_3:4592186-4592205 | Msa0273000:CDS | 45.0% |
| GAGATTCAAAGTTTCAGGGC+TGG | + | chr2_3:4592261-4592280 | Msa0273000:CDS | 45.0% | |
| CTTGAAGTGAGAAAGAGGAG+AGG | - | chr2_3:4592549-4592568 | None:intergenic | 45.0% | |
| ACTTCGAAGGAACGGTCATT+TGG | - | chr2_3:4592583-4592602 | None:intergenic | 45.0% | |
| ATGACCGTTCCTTCGAAGTA+AGG | + | chr2_3:4592584-4592603 | Msa0273000:intron | 45.0% | |
| TGACCGTTCCTTCGAAGTAA+GGG | + | chr2_3:4592585-4592604 | Msa0273000:intron | 45.0% | |
| TGTTTGGCAAGCAGACCAAA+TGG | - | chr2_3:4592839-4592858 | None:intergenic | 45.0% | |
| GGGTGTACTGCATAGTAATC+AGG | + | chr2_3:4592984-4593003 | Msa0273000:intron | 45.0% | |
| TCCCTATTCGCTACCTGATA+AGG | + | chr2_3:4593125-4593144 | Msa0273000:CDS | 45.0% | |
| AATCCAAGGGAGTTATCGTG+TGG | + | chr2_3:4593280-4593299 | Msa0273000:intron | 45.0% | |
| TCAACTCTCTTAAGTGTGGG+AGG | + | chr2_3:4593378-4593397 | Msa0273000:intron | 45.0% | |
| GTGGGAGGAAGATCAAACTA+TGG | + | chr2_3:4593393-4593412 | Msa0273000:intron | 45.0% | |
| !!! | TCATGTAGCTGCTTTTGCTG+AGG | + | chr2_3:4593663-4593682 | Msa0273000:intron | 45.0% |
| !!! | CATGTAGCTGCTTTTGCTGA+GGG | + | chr2_3:4593664-4593683 | Msa0273000:intron | 45.0% |
| ! | CAAGAAACATGCCACTTGCA+AGG | - | chr2_3:4593896-4593915 | None:intergenic | 45.0% |
| AGGCAAACAAAACTGTCCCA+GGG | - | chr2_3:4593931-4593950 | None:intergenic | 45.0% | |
| TGCCTCGTTTAAGCAAGGAA+AGG | + | chr2_3:4593946-4593965 | Msa0273000:CDS | 45.0% | |
| GGAAACACACTGCAGAACAT+AGG | + | chr2_3:4593967-4593986 | Msa0273000:CDS | 45.0% | |
| CTTTGTTCCCAGATTCCTTG+TGG | + | chr2_3:4594243-4594262 | Msa0273000:intron | 45.0% | |
| ACGTATGCCACAAGGAATCT+GGG | - | chr2_3:4594253-4594272 | None:intergenic | 45.0% | |
| AACGTATGCCACAAGGAATC+TGG | - | chr2_3:4594254-4594273 | None:intergenic | 45.0% | |
| ACAGTACAACGTATGCCACA+AGG | - | chr2_3:4594261-4594280 | None:intergenic | 45.0% | |
| AGCTGAAGAATGCTTATGGC+TGG | + | chr2_3:4594394-4594413 | Msa0273000:CDS | 45.0% | |
| ! | TGGCTGGTCAGATGAAATCA+AGG | + | chr2_3:4594410-4594429 | Msa0273000:CDS | 45.0% |
| AGCAGGTAATTCTCCAATCC+AGG | - | chr2_3:4594454-4594473 | None:intergenic | 45.0% | |
| AGACCAAAGATGCAGTGTGT+TGG | - | chr2_3:4594600-4594619 | None:intergenic | 45.0% | |
| TTGTGCTTGGACCTCAAATG+AGG | + | chr2_3:4594758-4594777 | Msa0273000:intron | 45.0% | |
| CAAGTCTATCATGTGGACAG+TGG | + | chr2_3:4594822-4594841 | Msa0273000:intron | 45.0% | |
| !! | AGTTGGTAGTAACTGGTTGG+GGG | + | chr2_3:4594977-4594996 | Msa0273000:intron | 45.0% |
| !!! | CTCTGAGGAGCATTTGCTTT+TGG | + | chr2_3:4595016-4595035 | Msa0273000:intron | 45.0% |
| TCTAGTGAGGGGAAGATAGT+TGG | + | chr2_3:4595161-4595180 | Msa0273000:CDS | 45.0% | |
| ! | TGGTTTTCAACCCTTGAGTC+GGG | + | chr2_3:4595181-4595200 | Msa0273000:CDS | 45.0% |
| GGCTGATAATCCTCTAGCAA+AGG | + | chr2_3:4595220-4595239 | Msa0273000:CDS | 45.0% | |
| TAGCAAAGGAGCTGTATGGA+GGG | + | chr2_3:4595234-4595253 | Msa0273000:CDS | 45.0% | |
| GCCAATGCAAAATAGGCATC+TGG | - | chr2_3:4595449-4595468 | None:intergenic | 45.0% | |
| TGGCCTAGCCAATGCAAAAT+AGG | - | chr2_3:4595456-4595475 | None:intergenic | 45.0% | |
| GAAAGCCCAATATGGAGGAA+GGG | - | chr2_3:4595653-4595672 | None:intergenic | 45.0% | |
| TGAAAGCCCAATATGGAGGA+AGG | - | chr2_3:4595654-4595673 | None:intergenic | 45.0% | |
| !! | TTATTTATATTTACTTAAAT+AGG | + | chr2_3:4591311-4591330 | Msa0273000:intron | 5.0% |
| !! | TATAATTAATAAAATGAAAA+AGG | - | chr2_3:4594060-4594079 | None:intergenic | 5.0% |
| CATTGCCGGAGAGTGAGATT+GGG | - | chr2_3:4590010-4590029 | None:intergenic | 50.0% | |
| GATGTTACGGAAGCCATTGC+CGG | - | chr2_3:4590024-4590043 | None:intergenic | 50.0% | |
| AAGATGGAAGGGGTGGTGTT+GGG | - | chr2_3:4590132-4590151 | None:intergenic | 50.0% | |
| GATGATGAAGATGGAAGGGG+TGG | - | chr2_3:4590139-4590158 | None:intergenic | 50.0% | |
| AATTGTCTTCGGGGGAGAAC+AGG | - | chr2_3:4590163-4590182 | None:intergenic | 50.0% | |
| GTGACTGGAATTGTCTTCGG+GGG | - | chr2_3:4590171-4590190 | None:intergenic | 50.0% | |
| GGTGACTGGAATTGTCTTCG+GGG | - | chr2_3:4590172-4590191 | None:intergenic | 50.0% | |
| CGGTGACTGGAATTGTCTTC+GGG | - | chr2_3:4590173-4590192 | None:intergenic | 50.0% | |
| CACCGAGCAACAATTTCTGC+AGG | + | chr2_3:4590188-4590207 | Msa0273000:CDS | 50.0% | |
| !! | TGGAGCTGTTGATTTCCGTC+AGG | + | chr2_3:4590290-4590309 | Msa0273000:CDS | 50.0% |
| !! | AGCTGTTGATTTCCGTCAGG+CGG | + | chr2_3:4590293-4590312 | Msa0273000:CDS | 50.0% |
| TGATTTCCGTCAGGCGGTTA+CGG | + | chr2_3:4590299-4590318 | Msa0273000:CDS | 50.0% | |
| GCTGATGAACATGTTCAGGC+TGG | + | chr2_3:4590348-4590367 | Msa0273000:CDS | 50.0% | |
| TCAGGCTGGTATGGATGCTA+TGG | + | chr2_3:4590362-4590381 | Msa0273000:CDS | 50.0% | |
| CCATGGTCACTAGAAGAAGC+AGG | - | chr2_3:4590405-4590424 | None:intergenic | 50.0% | |
| CCTGCTTCTTCTAGTGACCA+TGG | + | chr2_3:4590402-4590421 | Msa0273000:CDS | 50.0% | |
| CGTAGACTTCAGTTGTGGGT+AGG | + | chr2_3:4590725-4590744 | Msa0273000:intron | 50.0% | |
| !! | TAGGACGGGCTGACTTCTAT+AGG | + | chr2_3:4591059-4591078 | Msa0273000:intron | 50.0% |
| !! | AGGACGGGCTGACTTCTATA+GGG | + | chr2_3:4591060-4591079 | Msa0273000:intron | 50.0% |
| GACGATGACCTTTAGGCAAG+TGG | + | chr2_3:4591591-4591610 | Msa0273000:CDS | 50.0% | |
| GACCTCACTGTCTTTCAACC+AGG | + | chr2_3:4591637-4591656 | Msa0273000:CDS | 50.0% | |
| CTCCTGGTTGAAAGACAGTG+AGG | - | chr2_3:4591642-4591661 | None:intergenic | 50.0% | |
| GTCCCTGACACTGATACGTT+CGG | + | chr2_3:4591799-4591818 | Msa0273000:intron | 50.0% | |
| GAACCGAACGTATCAGTGTC+AGG | - | chr2_3:4591805-4591824 | None:intergenic | 50.0% | |
| GAGCTGAGAGTGAAAGATGC+AGG | - | chr2_3:4591855-4591874 | None:intergenic | 50.0% | |
| ATACTTGGCTGCCACTCCAT+AGG | - | chr2_3:4593157-4593176 | None:intergenic | 50.0% | |
| ACACCACACGATAACTCCCT+TGG | - | chr2_3:4593286-4593305 | None:intergenic | 50.0% | |
| AAGGGAGTTATCGTGTGGTG+TGG | + | chr2_3:4593285-4593304 | Msa0273000:intron | 50.0% | |
| TTGTCAGTCTCCCTTGCAAG+TGG | + | chr2_3:4593882-4593901 | Msa0273000:CDS | 50.0% | |
| TCTTGTAGCAATCAGTGCCC+TGG | + | chr2_3:4593911-4593930 | Msa0273000:CDS | 50.0% | |
| CTTGTAGCAATCAGTGCCCT+GGG | + | chr2_3:4593912-4593931 | Msa0273000:CDS | 50.0% | |
| GAGGCAAACAAAACTGTCCC+AGG | - | chr2_3:4593932-4593951 | None:intergenic | 50.0% | |
| !! | TAGAAGATGGTATCGGTGCC+TGG | + | chr2_3:4594433-4594452 | Msa0273000:CDS | 50.0% |
| CCTTCACCTCTCAAGTAAGC+AGG | - | chr2_3:4594471-4594490 | None:intergenic | 50.0% | |
| CCTGCTTACTTGAGAGGTGA+AGG | + | chr2_3:4594468-4594487 | Msa0273000:CDS | 50.0% | |
| CTATTGGAGTCTCCCGTACA+TGG | + | chr2_3:4594680-4594699 | Msa0273000:intron | 50.0% | |
| AGGGAGAAAGAGAGTGGGAA+GGG | + | chr2_3:4594938-4594957 | Msa0273000:intron | 50.0% | |
| !! | GTTGGTAGTAACTGGTTGGG+GGG | + | chr2_3:4594978-4594997 | Msa0273000:intron | 50.0% |
| ! | TTTTCAACCCTTGAGTCGGG+TGG | + | chr2_3:4595184-4595203 | Msa0273000:CDS | 50.0% |
| CCATACAGCTCCTTTGCTAG+AGG | - | chr2_3:4595233-4595252 | None:intergenic | 50.0% | |
| CCTCTAGCAAAGGAGCTGTA+TGG | + | chr2_3:4595230-4595249 | Msa0273000:CDS | 50.0% | |
| CTAGCAAAGGAGCTGTATGG+AGG | + | chr2_3:4595233-4595252 | Msa0273000:CDS | 50.0% | |
| CCATTGCCGGAGAGTGAGAT+TGG | - | chr2_3:4590011-4590030 | None:intergenic | 55.0% | |
| CCAATCTCACTCTCCGGCAA+TGG | + | chr2_3:4590008-4590027 | Msa0273000:exon | 55.0% | |
| ! | GAATGGGGTGAAGAGTGTGG+TGG | - | chr2_3:4590052-4590071 | None:intergenic | 55.0% |
| GTGGAATGGGGTGAAGAGTG+TGG | - | chr2_3:4590055-4590074 | None:intergenic | 55.0% | |
| !! | AGAGGGAGGGTTTGGTGATG+TGG | - | chr2_3:4590089-4590108 | None:intergenic | 55.0% |
| ! | AGATGGAAGGGGTGGTGTTG+GGG | - | chr2_3:4590131-4590150 | None:intergenic | 55.0% |
| GAAGATGGAAGGGGTGGTGT+TGG | - | chr2_3:4590133-4590152 | None:intergenic | 55.0% | |
| ACTTCAGTTGTGGGTAGGGG+TGG | + | chr2_3:4590730-4590749 | Msa0273000:intron | 55.0% | |
| !! | GATGGTATCGGTGCCTGGAT+TGG | + | chr2_3:4594438-4594457 | Msa0273000:CDS | 55.0% |
| TTGGAGTCTCCCGTACATGG+AGG | + | chr2_3:4594683-4594702 | Msa0273000:intron | 55.0% | |
| GAGGGAGAAAGAGAGTGGGA+AGG | + | chr2_3:4594937-4594956 | Msa0273000:intron | 55.0% | |
| TTAACCGCCACCCGACTCAA+GGG | - | chr2_3:4595194-4595213 | None:intergenic | 55.0% | |
| ATTAACCGCCACCCGACTCA+AGG | - | chr2_3:4595195-4595214 | None:intergenic | 55.0% | |
| ! | TCGGGTGGCGGTTAATCAGT+GGG | + | chr2_3:4595199-4595218 | Msa0273000:CDS | 55.0% |
| GGAGGGAAAAAGCTTTCCCC+AGG | + | chr2_3:4595251-4595270 | Msa0273000:CDS | 55.0% | |
| ! | CAAGCAGGTATCGTTGAGCC+AGG | + | chr2_3:4595365-4595384 | Msa0273000:intron | 55.0% |
| GTATCGTTGAGCCAGGTCTC+AGG | + | chr2_3:4595372-4595391 | Msa0273000:CDS | 55.0% | |
| GGAAGGTGAATCCTGAGACC+TGG | - | chr2_3:4595386-4595405 | None:intergenic | 55.0% | |
| GCGGTGAGAGAGGTGGAATG+GGG | - | chr2_3:4590067-4590086 | None:intergenic | 60.0% | |
| GGCGGTGAGAGAGGTGGAAT+GGG | - | chr2_3:4590068-4590087 | None:intergenic | 60.0% | |
| TGGCGGTGAGAGAGGTGGAA+TGG | - | chr2_3:4590069-4590088 | None:intergenic | 60.0% | |
| TGATGTGGCGGTGAGAGAGG+TGG | - | chr2_3:4590074-4590093 | None:intergenic | 60.0% | |
| ! | TGGTGATGTGGCGGTGAGAG+AGG | - | chr2_3:4590077-4590096 | None:intergenic | 60.0% |
| !! | GGGAGGGTTTGGTGATGTGG+CGG | - | chr2_3:4590086-4590105 | None:intergenic | 60.0% |
| TGGGGAGAAGAGGGAGGGTT+TGG | - | chr2_3:4590097-4590116 | None:intergenic | 60.0% | |
| TTACGGCTGCTGCGGCTGAT+GGG | + | chr2_3:4590316-4590335 | Msa0273000:CDS | 60.0% | |
| TCAGTGTCAGGGACACCTGC+AGG | - | chr2_3:4591793-4591812 | None:intergenic | 60.0% | |
| TCAACCCTTGAGTCGGGTGG+CGG | + | chr2_3:4595187-4595206 | Msa0273000:CDS | 60.0% | |
| ! | GTCGGGTGGCGGTTAATCAG+TGG | + | chr2_3:4595198-4595217 | Msa0273000:CDS | 60.0% |
| AGGGGTGGGGAGAAGAGGGA+GGG | - | chr2_3:4590102-4590121 | None:intergenic | 65.0% | |
| GTGGAGGGGTGGGGAGAAGA+GGG | - | chr2_3:4590106-4590125 | None:intergenic | 65.0% | |
| TGTTGGGGAGGTGGAGGGGT+GGG | - | chr2_3:4590116-4590135 | None:intergenic | 65.0% | |
| ! | GTGGTGTTGGGGAGGTGGAG+GGG | - | chr2_3:4590120-4590139 | None:intergenic | 65.0% |
| ! | GGTGGTGTTGGGGAGGTGGA+GGG | - | chr2_3:4590121-4590140 | None:intergenic | 65.0% |
| ! | AAGGGGTGGTGTTGGGGAGG+TGG | - | chr2_3:4590125-4590144 | None:intergenic | 65.0% |
| ! | TGGAAGGGGTGGTGTTGGGG+AGG | - | chr2_3:4590128-4590147 | None:intergenic | 65.0% |
| CAGCAGCCGTAACCGCCTGA+CGG | - | chr2_3:4590308-4590327 | None:intergenic | 65.0% | |
| TCAGGCGGTTACGGCTGCTG+CGG | + | chr2_3:4590308-4590327 | Msa0273000:CDS | 65.0% | |
| GTTACGGCTGCTGCGGCTGA+TGG | + | chr2_3:4590315-4590334 | Msa0273000:CDS | 65.0% | |
| TACGGCTGCTGCGGCTGATG+GGG | + | chr2_3:4590317-4590336 | Msa0273000:CDS | 65.0% | |
| CGTGGCAGGGAGTGAGAGTG+AGG | + | chr2_3:4594880-4594899 | Msa0273000:intron | 65.0% | |
| GAGGGGTGGGGAGAAGAGGG+AGG | - | chr2_3:4590103-4590122 | None:intergenic | 70.0% | |
| GGTGGAGGGGTGGGGAGAAG+AGG | - | chr2_3:4590107-4590126 | None:intergenic | 70.0% | |
| GTTGGGGAGGTGGAGGGGTG+GGG | - | chr2_3:4590115-4590134 | None:intergenic | 70.0% | |
| GTGTTGGGGAGGTGGAGGGG+TGG | - | chr2_3:4590117-4590136 | None:intergenic | 70.0% | |
| ! | GGGTGGTGTTGGGGAGGTGG+AGG | - | chr2_3:4590122-4590141 | None:intergenic | 70.0% |
| ACGGCTGCTGCGGCTGATGG+GGG | + | chr2_3:4590318-4590337 | Msa0273000:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 4589910 | 4595866 | 4589910 | ID=Msa0273000;Name=Msa0273000 |
| chr2_3 | mRNA | 4589910 | 4595866 | 4589910 | ID=Msa0273000-mRNA-1;Parent=Msa0273000;Name=Msa0273000-mRNA-1;_AED=0.05;_eAED=0.05;_QI=117|1|1|1|1|1|8|382|613 |
| chr2_3 | exon | 4589910 | 4590443 | 4589910 | ID=Msa0273000-mRNA-1:exon:2282;Parent=Msa0273000-mRNA-1 |
| chr2_3 | exon | 4591496 | 4591699 | 4591496 | ID=Msa0273000-mRNA-1:exon:2283;Parent=Msa0273000-mRNA-1 |
| chr2_3 | exon | 4591849 | 4592334 | 4591849 | ID=Msa0273000-mRNA-1:exon:2284;Parent=Msa0273000-mRNA-1 |
| chr2_3 | exon | 4593087 | 4593197 | 4593087 | ID=Msa0273000-mRNA-1:exon:2285;Parent=Msa0273000-mRNA-1 |
| chr2_3 | exon | 4593861 | 4594043 | 4593861 | ID=Msa0273000-mRNA-1:exon:2286;Parent=Msa0273000-mRNA-1 |
| chr2_3 | exon | 4594363 | 4594569 | 4594363 | ID=Msa0273000-mRNA-1:exon:2287;Parent=Msa0273000-mRNA-1 |
| chr2_3 | exon | 4595152 | 4595272 | 4595152 | ID=Msa0273000-mRNA-1:exon:2288;Parent=Msa0273000-mRNA-1 |
| chr2_3 | exon | 4595372 | 4595866 | 4595372 | ID=Msa0273000-mRNA-1:exon:2289;Parent=Msa0273000-mRNA-1 |
| chr2_3 | five_prime_UTR | 4589910 | 4590026 | 4589910 | ID=Msa0273000-mRNA-1:five_prime_utr;Parent=Msa0273000-mRNA-1 |
| chr2_3 | CDS | 4590027 | 4590443 | 4590027 | ID=Msa0273000-mRNA-1:cds;Parent=Msa0273000-mRNA-1 |
| chr2_3 | CDS | 4591496 | 4591699 | 4591496 | ID=Msa0273000-mRNA-1:cds;Parent=Msa0273000-mRNA-1 |
| chr2_3 | CDS | 4591849 | 4592334 | 4591849 | ID=Msa0273000-mRNA-1:cds;Parent=Msa0273000-mRNA-1 |
| chr2_3 | CDS | 4593087 | 4593197 | 4593087 | ID=Msa0273000-mRNA-1:cds;Parent=Msa0273000-mRNA-1 |
| chr2_3 | CDS | 4593861 | 4594043 | 4593861 | ID=Msa0273000-mRNA-1:cds;Parent=Msa0273000-mRNA-1 |
| chr2_3 | CDS | 4594363 | 4594569 | 4594363 | ID=Msa0273000-mRNA-1:cds;Parent=Msa0273000-mRNA-1 |
| chr2_3 | CDS | 4595152 | 4595272 | 4595152 | ID=Msa0273000-mRNA-1:cds;Parent=Msa0273000-mRNA-1 |
| chr2_3 | CDS | 4595372 | 4595484 | 4595372 | ID=Msa0273000-mRNA-1:cds;Parent=Msa0273000-mRNA-1 |
| chr2_3 | three_prime_UTR | 4595485 | 4595866 | 4595485 | ID=Msa0273000-mRNA-1:three_prime_utr;Parent=Msa0273000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
