Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0212730 | XP_003596200.1 | 94.378 | 249 | 14 | 0 | 1 | 249 | 1 | 249 | 1.02e-171 | 483 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0212730 | sp|Q9LDY9|IOJAC_ARATH | 59.756 | 246 | 81 | 3 | 2 | 237 | 1 | 238 | 5.60e-95 | 281 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0212730 | G7IJA0 | 94.378 | 249 | 14 | 0 | 1 | 249 | 1 | 249 | 4.86e-172 | 483 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012380 | Msa0212730 | 0.810132 | 1.341765e-50 | -8.615850e-47 |
| Msa0014410 | Msa0212730 | 0.808165 | 3.541710e-50 | -8.615850e-47 |
| Msa0018470 | Msa0212730 | 0.828715 | 7.704610e-55 | -8.615850e-47 |
| Msa0044180 | Msa0212730 | 0.838450 | 2.854524e-57 | -8.615850e-47 |
| Msa0057740 | Msa0212730 | 0.802923 | 4.456134e-49 | -8.615850e-47 |
| Msa0064550 | Msa0212730 | 0.861386 | 1.064401e-63 | -8.615850e-47 |
| Msa0072830 | Msa0212730 | 0.826768 | 2.262751e-54 | -8.615850e-47 |
| Msa0072860 | Msa0212730 | 0.830352 | 3.083237e-55 | -8.615850e-47 |
| Msa0081790 | Msa0212730 | 0.803697 | 3.080033e-49 | -8.615850e-47 |
| Msa0090860 | Msa0212730 | 0.832603 | 8.604793e-56 | -8.615850e-47 |
| Msa0091480 | Msa0212730 | 0.803708 | 3.063755e-49 | -8.615850e-47 |
| Msa0096020 | Msa0212730 | 0.803458 | 3.452870e-49 | -8.615850e-47 |
| Msa0103060 | Msa0212730 | 0.815107 | 1.095134e-51 | -8.615850e-47 |
| Msa0109490 | Msa0212730 | 0.814570 | 1.440271e-51 | -8.615850e-47 |
| Msa0128110 | Msa0212730 | 0.801493 | 8.772424e-49 | -8.615850e-47 |
| Msa0137010 | Msa0212730 | 0.805665 | 1.196514e-49 | -8.615850e-47 |
| Msa0140290 | Msa0212730 | 0.835957 | 1.239866e-56 | -8.615850e-47 |
| Msa0154220 | Msa0212730 | 0.842373 | 2.690280e-58 | -8.615850e-47 |
| Msa0154240 | Msa0212730 | 0.850752 | 1.386096e-60 | -8.615850e-47 |
| Msa0154270 | Msa0212730 | 0.834595 | 2.737611e-56 | -8.615850e-47 |
| Msa0155610 | Msa0212730 | 0.830163 | 3.428757e-55 | -8.615850e-47 |
| Msa0158610 | Msa0212730 | 0.812100 | 5.024829e-51 | -8.615850e-47 |
| Msa0171920 | Msa0212730 | 0.831396 | 1.709184e-55 | -8.615850e-47 |
| Msa0178940 | Msa0212730 | 0.800017 | 1.755324e-48 | -8.615850e-47 |
| Msa0183560 | Msa0212730 | 0.814768 | 1.302413e-51 | -8.615850e-47 |
| Msa0198440 | Msa0212730 | 0.819549 | 1.095750e-52 | -8.615850e-47 |
| Msa0199740 | Msa0212730 | 0.800118 | 1.674292e-48 | -8.615850e-47 |
| Msa0200840 | Msa0212730 | 0.827524 | 1.491998e-54 | -8.615850e-47 |
| Msa0210880 | Msa0212730 | 0.835185 | 1.943458e-56 | -8.615850e-47 |
| Msa0212730 | Msa0216210 | 0.816662 | 4.926170e-52 | -8.615850e-47 |
| Msa0212730 | Msa0220640 | 0.824567 | 7.527836e-54 | -8.615850e-47 |
| Msa0212730 | Msa0224370 | 0.864686 | 1.016734e-64 | -8.615850e-47 |
| Msa0212730 | Msa0224400 | 0.874548 | 6.197038e-68 | -8.615850e-47 |
| Msa0212730 | Msa0225880 | 0.858053 | 1.072630e-62 | -8.615850e-47 |
| Msa0212730 | Msa0233200 | 0.825202 | 5.329168e-54 | -8.615850e-47 |
| Msa0212730 | Msa0246300 | 0.807569 | 4.741023e-50 | -8.615850e-47 |
| Msa0212730 | Msa0253160 | 0.906063 | 2.212006e-80 | -8.615850e-47 |
| Msa0212730 | Msa0260470 | 0.860655 | 1.775408e-63 | -8.615850e-47 |
| Msa0212730 | Msa0265580 | 0.839574 | 1.460573e-57 | -8.615850e-47 |
| Msa0212730 | Msa0270460 | 0.812095 | 5.036300e-51 | -8.615850e-47 |
| Msa0212730 | Msa0273000 | 0.837899 | 3.958291e-57 | -8.615850e-47 |
| Msa0212730 | Msa0278670 | 0.816765 | 4.670547e-52 | -8.615850e-47 |
| Msa0212730 | Msa0291940 | 0.910446 | 1.855920e-82 | -8.615850e-47 |
| Msa0212730 | Msa0295570 | 0.813884 | 2.041864e-51 | -8.615850e-47 |
| Msa0212730 | Msa0303440 | 0.853043 | 3.101681e-61 | -8.615850e-47 |
| Msa0212730 | Msa0303500 | 0.853047 | 3.093967e-61 | -8.615850e-47 |
| Msa0212730 | Msa0304110 | 0.864953 | 8.385599e-65 | -8.615850e-47 |
| Msa0212730 | Msa0311570 | 0.800678 | 1.287454e-48 | -8.615850e-47 |
| Msa0212730 | Msa0318070 | 0.815899 | 7.297997e-52 | -8.615850e-47 |
| Msa0212730 | Msa0319710 | 0.809263 | 2.062738e-50 | -8.615850e-47 |
| Msa0212730 | Msa0341190 | 0.866646 | 2.448383e-65 | -8.615850e-47 |
| Msa0212730 | Msa0344680 | 0.818898 | 1.541582e-52 | -8.615850e-47 |
| Msa0212730 | Msa0344710 | 0.816063 | 6.708975e-52 | -8.615850e-47 |
| Msa0212730 | Msa0354390 | 0.805567 | 1.254211e-49 | -8.615850e-47 |
| Msa0212730 | Msa0358290 | 0.915813 | 3.768503e-85 | -8.615850e-47 |
| Msa0212730 | Msa0369100 | 0.848209 | 7.092750e-60 | -8.615850e-47 |
| Msa0212730 | Msa0373220 | 0.808375 | 3.194091e-50 | -8.615850e-47 |
| Msa0212730 | Msa0378670 | 0.834141 | 3.558394e-56 | -8.615850e-47 |
| Msa0212730 | Msa0378700 | 0.849781 | 2.594322e-60 | -8.615850e-47 |
| Msa0212730 | Msa0392020 | 0.841218 | 5.430131e-58 | -8.615850e-47 |
| Msa0212730 | Msa0392050 | 0.822017 | 2.966615e-53 | -8.615850e-47 |
| Msa0212730 | Msa0393140 | 0.814115 | 1.815466e-51 | -8.615850e-47 |
| Msa0212730 | Msa0401340 | 0.842932 | 1.911123e-58 | -8.615850e-47 |
| Msa0212730 | Msa0404070 | 0.848884 | 4.610734e-60 | -8.615850e-47 |
| Msa0212730 | Msa0404690 | 0.802929 | 4.442803e-49 | -8.615850e-47 |
| Msa0212730 | Msa0416060 | 0.808575 | 2.895204e-50 | -8.615850e-47 |
| Msa0212730 | Msa0419040 | 0.837900 | 3.957026e-57 | -8.615850e-47 |
| Msa0212730 | Msa0421800 | 0.804253 | 2.360985e-49 | -8.615850e-47 |
| Msa0212730 | Msa0428330 | 0.817550 | 3.111406e-52 | -8.615850e-47 |
| Msa0212730 | Msa0431520 | 0.803444 | 3.476541e-49 | -8.615850e-47 |
| Msa0212730 | Msa0437550 | 0.831543 | 1.573013e-55 | -8.615850e-47 |
| Msa0212730 | Msa0448120 | 0.835600 | 1.526986e-56 | -8.615850e-47 |
| Msa0212730 | Msa0456480 | 0.805269 | 1.448593e-49 | -8.615850e-47 |
| Msa0212730 | Msa0463150 | 0.855494 | 6.074508e-62 | -8.615850e-47 |
| Msa0212730 | Msa0465800 | 0.832199 | 1.083409e-55 | -8.615850e-47 |
| Msa0212730 | Msa0467800 | 0.808300 | 3.313905e-50 | -8.615850e-47 |
| Msa0212730 | Msa0467880 | 0.816052 | 6.745118e-52 | -8.615850e-47 |
| Msa0212730 | Msa0468020 | 0.806238 | 9.064996e-50 | -8.615850e-47 |
| Msa0212730 | Msa0469950 | 0.823246 | 1.535787e-53 | -8.615850e-47 |
| Msa0212730 | Msa0472740 | 0.829789 | 4.227909e-55 | -8.615850e-47 |
| Msa0212730 | Msa0481490 | 0.817505 | 3.185324e-52 | -8.615850e-47 |
| Msa0212730 | Msa0514260 | 0.809483 | 1.850356e-50 | -8.615850e-47 |
| Msa0212730 | Msa0525270 | 0.826304 | 2.919798e-54 | -8.615850e-47 |
| Msa0212730 | Msa0525280 | 0.820749 | 5.819952e-53 | -8.615850e-47 |
| Msa0212730 | Msa0530340 | 0.800887 | 1.167415e-48 | -8.615850e-47 |
| Msa0212730 | Msa0545230 | 0.846541 | 2.036496e-59 | -8.615850e-47 |
| Msa0212730 | Msa0546080 | 0.806296 | 8.813993e-50 | -8.615850e-47 |
| Msa0212730 | Msa0549540 | 0.829472 | 5.051790e-55 | -8.615850e-47 |
| Msa0212730 | Msa0549760 | 0.850912 | 1.249399e-60 | -8.615850e-47 |
| Msa0212730 | Msa0577230 | 0.831841 | 1.327923e-55 | -8.615850e-47 |
| Msa0212730 | Msa0580540 | 0.807530 | 4.832391e-50 | -8.615850e-47 |
| Msa0212730 | Msa0583740 | 0.802097 | 6.593075e-49 | -8.615850e-47 |
| Msa0212730 | Msa0593810 | 0.815328 | 9.778530e-52 | -8.615850e-47 |
| Msa0212730 | Msa0600820 | 0.819941 | 8.913288e-53 | -8.615850e-47 |
| Msa0212730 | Msa0605250 | 0.854849 | 9.355354e-62 | -8.615850e-47 |
| Msa0212730 | Msa0609790 | 0.800680 | 1.286520e-48 | -8.615850e-47 |
| Msa0212730 | Msa0610360 | 0.804250 | 2.363851e-49 | -8.615850e-47 |
| Msa0212730 | Msa0621780 | 0.802437 | 5.612786e-49 | -8.615850e-47 |
| Msa0212730 | Msa0622250 | 0.850379 | 1.764011e-60 | -8.615850e-47 |
| Msa0212730 | Msa0624040 | 0.800020 | 1.753229e-48 | -8.615850e-47 |
| Msa0212730 | Msa0628100 | 0.824078 | 9.808478e-54 | -8.615850e-47 |
| Msa0212730 | Msa0646190 | 0.823071 | 1.687361e-53 | -8.615850e-47 |
| Msa0212730 | Msa0649310 | 0.811922 | 5.495062e-51 | -8.615850e-47 |
| Msa0212730 | Msa0650890 | 0.803517 | 3.356955e-49 | -8.615850e-47 |
| Msa0212730 | Msa0676100 | 0.811919 | 5.503472e-51 | -8.615850e-47 |
| Msa0212730 | Msa0679780 | 0.839830 | 1.253287e-57 | -8.615850e-47 |
| Msa0212730 | Msa0681210 | 0.808669 | 2.764475e-50 | -8.615850e-47 |
| Msa0212730 | Msa0685890 | 0.802247 | 6.141469e-49 | -8.615850e-47 |
| Msa0212730 | Msa0690720 | 0.812970 | 3.242880e-51 | -8.615850e-47 |
| Msa0212730 | Msa0705050 | 0.802102 | 6.580114e-49 | -8.615850e-47 |
| Msa0212730 | Msa0705810 | 0.818633 | 1.770226e-52 | -8.615850e-47 |
| Msa0212730 | Msa0734760 | 0.816494 | 5.372941e-52 | -8.615850e-47 |
| Msa0212730 | Msa0747900 | 0.801013 | 1.099833e-48 | -8.615850e-47 |
| Msa0212730 | Msa0748330 | 0.851776 | 7.120560e-61 | -8.615850e-47 |
| Msa0212730 | Msa0748980 | 0.807949 | 3.936361e-50 | -8.615850e-47 |
| Msa0212730 | Msa0750380 | 0.809453 | 1.878209e-50 | -8.615850e-47 |
| Msa0212730 | Msa0752830 | 0.800774 | 1.231017e-48 | -8.615850e-47 |
| Msa0212730 | Msa0763910 | 0.800918 | 1.150494e-48 | -8.615850e-47 |
| Msa0212730 | Msa0772500 | 0.836229 | 1.057563e-56 | -8.615850e-47 |
| Msa0212730 | Msa0773290 | 0.830279 | 3.211363e-55 | -8.615850e-47 |
| Msa0212730 | Msa0780140 | 0.802529 | 5.372602e-49 | -8.615850e-47 |
| Msa0212730 | Msa0790640 | 0.841848 | 3.705148e-58 | -8.615850e-47 |
| Msa0212730 | Msa0793100 | 0.820134 | 8.051801e-53 | -8.615850e-47 |
| Msa0212730 | Msa0794460 | 0.826793 | 2.231934e-54 | -8.615850e-47 |
| Msa0212730 | Msa0795710 | 0.802399 | 5.714318e-49 | -8.615850e-47 |
| Msa0212730 | Msa0798460 | 0.811987 | 5.317665e-51 | -8.615850e-47 |
| Msa0212730 | Msa0802530 | 0.807601 | 4.666861e-50 | -8.615850e-47 |
| Msa0212730 | Msa0812970 | 0.808966 | 2.388088e-50 | -8.615850e-47 |
| Msa0212730 | Msa0813630 | 0.840913 | 6.528262e-58 | -8.615850e-47 |
| Msa0212730 | Msa0818550 | 0.826321 | 2.893326e-54 | -8.615850e-47 |
| Msa0212730 | Msa0822370 | 0.841631 | 4.226230e-58 | -8.615850e-47 |
| Msa0212730 | Msa0825520 | 0.815749 | 7.881825e-52 | -8.615850e-47 |
| Msa0212730 | Msa0830720 | 0.829370 | 5.346236e-55 | -8.615850e-47 |
| Msa0212730 | Msa0840890 | 0.853679 | 2.037466e-61 | -8.615850e-47 |
| Msa0212730 | Msa0844100 | 0.813144 | 2.969172e-51 | -8.615850e-47 |
| Msa0212730 | Msa0853480 | 0.824802 | 6.624343e-54 | -8.615850e-47 |
| Msa0212730 | Msa0861800 | 0.835301 | 1.816684e-56 | -8.615850e-47 |
| Msa0212730 | Msa0863250 | 0.801614 | 8.287232e-49 | -8.615850e-47 |
| Msa0212730 | Msa0864730 | 0.813707 | 2.233044e-51 | -8.615850e-47 |
| Msa0212730 | Msa0864750 | 0.816729 | 4.759473e-52 | -8.615850e-47 |
| Msa0212730 | Msa0899730 | 0.869498 | 2.961064e-66 | -8.615850e-47 |
| Msa0212730 | Msa0913120 | 0.803536 | 3.327207e-49 | -8.615850e-47 |
| Msa0212730 | Msa0927190 | 0.812770 | 3.586948e-51 | -8.615850e-47 |
| Msa0212730 | Msa0944690 | 0.814260 | 1.687107e-51 | -8.615850e-47 |
| Msa0212730 | Msa0964650 | 0.871201 | 8.185832e-67 | -8.615850e-47 |
| Msa0212730 | Msa0968780 | 0.830434 | 2.942886e-55 | -8.615850e-47 |
| Msa0212730 | Msa0971860 | 0.804557 | 2.039742e-49 | -8.615850e-47 |
| Msa0212730 | Msa0975550 | 0.801973 | 6.992078e-49 | -8.615850e-47 |
| Msa0212730 | Msa0975560 | 0.826123 | 3.223245e-54 | -8.615850e-47 |
| Msa0212730 | Msa0984000 | 0.860369 | 2.167344e-63 | -8.615850e-47 |
| Msa0212730 | Msa0986620 | 0.811385 | 7.188797e-51 | -8.615850e-47 |
| Msa0212730 | Msa0999480 | 0.837398 | 5.323187e-57 | -8.615850e-47 |
| Msa0212730 | Msa0999590 | 0.808204 | 3.474792e-50 | -8.615850e-47 |
| Msa0212730 | Msa1010470 | 0.801193 | 1.010763e-48 | -8.615850e-47 |
| Msa0212730 | Msa1030430 | 0.829730 | 4.370559e-55 | -8.615850e-47 |
| Msa0212730 | Msa1036020 | -0.837655 | 4.573540e-57 | -8.615850e-47 |
| Msa0212730 | Msa1036250 | 0.842784 | 2.093070e-58 | -8.615850e-47 |
| Msa0212730 | Msa1040390 | 0.843937 | 1.030473e-58 | -8.615850e-47 |
| Msa0212730 | Msa1053690 | 0.820035 | 8.484400e-53 | -8.615850e-47 |
| Msa0212730 | Msa1067910 | 0.851509 | 8.475057e-61 | -8.615850e-47 |
| Msa0212730 | Msa1069440 | 0.871054 | 9.149934e-67 | -8.615850e-47 |
| Msa0212730 | Msa1076280 | -0.814764 | 1.304523e-51 | -8.615850e-47 |
| Msa0212730 | Msa1076520 | 0.832136 | 1.122866e-55 | -8.615850e-47 |
| Msa0212730 | Msa1079480 | 0.814822 | 1.266687e-51 | -8.615850e-47 |
| Msa0212730 | Msa1082150 | 0.832031 | 1.191812e-55 | -8.615850e-47 |
| Msa0212730 | Msa1083140 | 0.826787 | 2.239677e-54 | -8.615850e-47 |
| Msa0212730 | Msa1091230 | 0.806420 | 8.297199e-50 | -8.615850e-47 |
| Msa0212730 | Msa1096510 | 0.807549 | 4.786782e-50 | -8.615850e-47 |
| Msa0212730 | Msa1096570 | 0.805134 | 1.545990e-49 | -8.615850e-47 |
| Msa0212730 | Msa1101300 | 0.806968 | 6.355822e-50 | -8.615850e-47 |
| Msa0212730 | Msa1127900 | 0.854178 | 1.463717e-61 | -8.615850e-47 |
| Msa0212730 | Msa1130660 | 0.818386 | 2.013716e-52 | -8.615850e-47 |
| Msa0212730 | Msa1130730 | 0.818413 | 1.986124e-52 | -8.615850e-47 |
| Msa0212730 | Msa1131900 | 0.806712 | 7.198796e-50 | -8.615850e-47 |
| Msa0212730 | Msa1133440 | 0.829208 | 5.855243e-55 | -8.615850e-47 |
| Msa0212730 | Msa1144700 | 0.827667 | 1.378292e-54 | -8.615850e-47 |
| Msa0212730 | Msa1144730 | 0.822061 | 2.896807e-53 | -8.615850e-47 |
| Msa0212730 | Msa1157310 | 0.839638 | 1.405468e-57 | -8.615850e-47 |
| Msa0212730 | Msa1158090 | 0.834473 | 2.937003e-56 | -8.615850e-47 |
| Msa0212730 | Msa1165810 | 0.858038 | 1.083781e-62 | -8.615850e-47 |
| Msa0212730 | Msa1177240 | 0.818796 | 1.626132e-52 | -8.615850e-47 |
| Msa0212730 | Msa1180050 | 0.837487 | 5.050122e-57 | -8.615850e-47 |
| Msa0212730 | Msa1182830 | 0.807640 | 4.580132e-50 | -8.615850e-47 |
| Msa0212730 | Msa1184010 | 0.847433 | 1.160092e-59 | -8.615850e-47 |
| Msa0212730 | Msa1187810 | 0.848700 | 5.184410e-60 | -8.615850e-47 |
| Msa0212730 | Msa1198450 | 0.820328 | 7.267777e-53 | -8.615850e-47 |
| Msa0212730 | Msa1211260 | 0.823512 | 1.331209e-53 | -8.615850e-47 |
| Msa0212730 | Msa1211300 | 0.838543 | 2.702146e-57 | -8.615850e-47 |
| Msa0212730 | Msa1211390 | 0.831096 | 2.025441e-55 | -8.615850e-47 |
| Msa0212730 | Msa1219060 | 0.841907 | 3.574665e-58 | -8.615850e-47 |
| Msa0212730 | Msa1219780 | -0.837733 | 4.367283e-57 | -8.615850e-47 |
| Msa0212730 | Msa1222030 | -0.808296 | 3.321498e-50 | -8.615850e-47 |
| Msa0212730 | Msa1226880 | 0.833138 | 6.335052e-56 | -8.615850e-47 |
| Msa0212730 | Msa1228350 | 0.852272 | 5.147738e-61 | -8.615850e-47 |
| Msa0212730 | Msa1228460 | 0.819635 | 1.046959e-52 | -8.615850e-47 |
| Msa0212730 | Msa1232270 | 0.846674 | 1.872972e-59 | -8.615850e-47 |
| Msa0212730 | Msa1242010 | 0.808150 | 3.567209e-50 | -8.615850e-47 |
| Msa0212730 | Msa1248220 | 0.840136 | 1.042657e-57 | -8.615850e-47 |
| Msa0212730 | Msa1255020 | 0.815641 | 8.331830e-52 | -8.615850e-47 |
| Msa0212730 | Msa1266710 | -0.824051 | 9.949750e-54 | -8.615850e-47 |
| Msa0212730 | Msa1270770 | 0.833509 | 5.118381e-56 | -8.615850e-47 |
| Msa0212730 | Msa1281270 | 0.810235 | 1.274657e-50 | -8.615850e-47 |
| Msa0212730 | Msa1283120 | 0.811343 | 7.341746e-51 | -8.615850e-47 |
| Msa0212730 | Msa1295470 | 0.808794 | 2.599214e-50 | -8.615850e-47 |
| Msa0212730 | Msa1306200 | 0.816151 | 6.410520e-52 | -8.615850e-47 |
| Msa0212730 | Msa1320380 | 0.800856 | 1.184281e-48 | -8.615850e-47 |
| Msa0212730 | Msa1326400 | 0.802933 | 4.434390e-49 | -8.615850e-47 |
| Msa0212730 | Msa1332690 | 0.808178 | 3.517997e-50 | -8.615850e-47 |
| Msa0212730 | Msa1349360 | 0.805793 | 1.124462e-49 | -8.615850e-47 |
| Msa0212730 | Msa1349810 | 0.858857 | 6.175842e-63 | -8.615850e-47 |
| Msa0212730 | Msa1354090 | 0.816947 | 4.252726e-52 | -8.615850e-47 |
| Msa0212730 | Msa1358340 | 0.851545 | 8.275724e-61 | -8.615850e-47 |
| Msa0212730 | Msa1359890 | 0.828686 | 7.830605e-55 | -8.615850e-47 |
| Msa0212730 | Msa1369180 | 0.824692 | 7.033596e-54 | -8.615850e-47 |
| Msa0212730 | Msa1370930 | -0.804545 | 2.052118e-49 | -8.615850e-47 |
| Msa0212730 | Msa1375780 | 0.864251 | 1.391187e-64 | -8.615850e-47 |
| Msa0212730 | Msa1378470 | 0.801579 | 8.424128e-49 | -8.615850e-47 |
| Msa0212730 | Msa1380720 | 0.838053 | 3.614067e-57 | -8.615850e-47 |
| Msa0212730 | Msa1384620 | 0.818564 | 1.835472e-52 | -8.615850e-47 |
| Msa0212730 | Msa1388520 | 0.872265 | 3.632492e-67 | -8.615850e-47 |
| Msa0212730 | Msa1394900 | 0.843666 | 1.217671e-58 | -8.615850e-47 |
| Msa0212730 | Msa1395580 | 0.860830 | 1.570996e-63 | -8.615850e-47 |
| Msa0212730 | Msa1405380 | 0.840206 | 9.998412e-58 | -8.615850e-47 |
| Msa0212730 | Msa1407210 | -0.851494 | 8.558921e-61 | -8.615850e-47 |
| Msa0212730 | Msa1413900 | 0.832760 | 7.865982e-56 | -8.615850e-47 |
| Msa0212730 | Msa1415270 | 0.822782 | 1.970265e-53 | -8.615850e-47 |
| Msa0212730 | Msa1434660 | 0.835306 | 1.812089e-56 | -8.615850e-47 |
| Msa0212730 | Msa1450630 | 0.818956 | 1.495589e-52 | -8.615850e-47 |
| Msa0212730 | Msa1459540 | 0.805675 | 1.190408e-49 | -8.615850e-47 |
| Msa0212730 | Msa1462600 | 0.800465 | 1.423317e-48 | -8.615850e-47 |
| Msa0212730 | Msa1466130 | -0.802468 | 5.530260e-49 | -8.615850e-47 |
| Msa0212730 | Msa1466350 | 0.851868 | 6.706010e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0212730 | MtrunA17_Chr2g0312081 | 94.378 | 249 | 14 | 0 | 1 | 249 | 1 | 249 | 9.35e-176 | 483 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0212730 | AT3G12930.1 | 59.756 | 246 | 81 | 3 | 2 | 237 | 1 | 238 | 5.70e-96 | 281 |
Find 86 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAAGAGCTTTCTATAATT+TGG | 0.135819 | 2_1:+54882420 | Msa0212730:CDS |
| CATACCCGATAGCATCAATT+TGG | 0.241247 | 2_1:-54881774 | None:intergenic |
| TTGTGAAGCCACTTGTTTAC+TGG | 0.250083 | 2_1:+54881713 | Msa0212730:CDS |
| TAATGTAAACAAACTTAAAT+TGG | 0.274500 | 2_1:-54882582 | None:intergenic |
| TCTCTGCACTTGCAGGCTTT+TGG | 0.287492 | 2_1:-54881405 | None:intergenic |
| GATGAATTATTAAATAACTA+TGG | 0.298468 | 2_1:+54881358 | Msa0212730:CDS |
| TTTCACCAGTTTCTACAAAA+AGG | 0.300032 | 2_1:+54880051 | Msa0212730:CDS |
| TCTAAGAAAACTGTAATAGA+TGG | 0.306550 | 2_1:+54882753 | Msa0212730:three_prime_UTR |
| TCGTCAATCTCTGCACTTGC+AGG | 0.326105 | 2_1:-54881412 | None:intergenic |
| CTTAAATTGGCAGCGATTAT+CGG | 0.331149 | 2_1:-54882569 | None:intergenic |
| GCCTCTAGTTGCTGTGGAAC+TGG | 0.347631 | 2_1:+54881645 | Msa0212730:intron |
| CCTCGCCGGCGCCGTCGTTC+CGG | 0.368354 | 2_1:+54879967 | Msa0212730:CDS |
| ATACCCGATAGCATCAATTT+GGG | 0.374377 | 2_1:-54881773 | None:intergenic |
| GGTCACCTTCACCGGCGAAA+TGG | 0.384659 | 2_1:+54879988 | Msa0212730:CDS |
| CGACGGCGCCGGCGAGGGAT+AGG | 0.387111 | 2_1:-54879961 | None:intergenic |
| GTCGTTCCGGTCACCTTCAC+CGG | 0.392600 | 2_1:+54879980 | Msa0212730:CDS |
| TTGTTATCAGCTTACATGAT+AGG | 0.394608 | 2_1:-54881447 | None:intergenic |
| GACCGGGCTGAAAAGAAATA+TGG | 0.400591 | 2_1:+54881913 | Msa0212730:CDS |
| AGTGGAGGCTCATTCCATTC+TGG | 0.406595 | 2_1:+54882660 | Msa0212730:three_prime_UTR |
| ATGACTTACCGAAGTCCAAC+AGG | 0.413851 | 2_1:-54881975 | None:intergenic |
| GTCACCTTCACCGGCGAAAT+GGG | 0.418370 | 2_1:+54879989 | Msa0212730:CDS |
| AGCCAATGACAACTCTTTCT+CGG | 0.422824 | 2_1:+54880156 | Msa0212730:CDS |
| CACGGTTGCAAGTGAGGTTA+AGG | 0.426301 | 2_1:+54881669 | Msa0212730:CDS |
| AAAACTGTAATAGATGGGTT+TGG | 0.432049 | 2_1:+54882759 | Msa0212730:three_prime_UTR |
| CAGTTGATTGATTGTCAGCT+TGG | 0.434993 | 2_1:+54882540 | Msa0212730:exon |
| TCCAACAGGGTCCATGAGTT+GGG | 0.438380 | 2_1:-54881961 | None:intergenic |
| TACCGAGAAAGAGTTGTCAT+TGG | 0.438957 | 2_1:-54880158 | None:intergenic |
| AATTATAGAAAGCTCTTTGT+GGG | 0.448717 | 2_1:-54882417 | None:intergenic |
| TTGGATAAGCACGGAGGGAA+GGG | 0.471268 | 2_1:+54882778 | Msa0212730:three_prime_UTR |
| AAACTGGTGAAAACCTTTGT+GGG | 0.475275 | 2_1:-54880040 | None:intergenic |
| CGTCCCCAAATTGATGCTAT+CGG | 0.492807 | 2_1:+54881769 | Msa0212730:CDS |
| GTCCAACAGGGTCCATGAGT+TGG | 0.493640 | 2_1:-54881962 | None:intergenic |
| GTCCCCAAATTGATGCTATC+GGG | 0.500874 | 2_1:+54881770 | Msa0212730:CDS |
| TTTGGATAAGCACGGAGGGA+AGG | 0.506458 | 2_1:+54882777 | Msa0212730:three_prime_UTR |
| GGTTAAGGCAGGGGATATAA+AGG | 0.507409 | 2_1:+54881684 | Msa0212730:CDS |
| ATTTCGCCGGTGAAGGTGAC+CGG | 0.510552 | 2_1:-54879986 | None:intergenic |
| AAATATGGTAAAATTCCAAA+TGG | 0.510572 | 2_1:+54881928 | Msa0212730:CDS |
| ACGGTTTGAATTTGAAGAGA+AGG | 0.511004 | 2_1:+54880101 | Msa0212730:CDS |
| TAGGCTCCCTCATTGCGAAA+TGG | 0.511514 | 2_1:-54882496 | None:intergenic |
| AAATTATAGAAAGCTCTTTG+TGG | 0.514327 | 2_1:-54882418 | None:intergenic |
| ATGAATTATTAAATAACTAT+GGG | 0.519880 | 2_1:+54881359 | Msa0212730:CDS |
| ATGACCCATTTCGCCGGTGA+AGG | 0.521794 | 2_1:-54879993 | None:intergenic |
| TGGATAAGCACGGAGGGAAG+GGG | 0.522742 | 2_1:+54882779 | Msa0212730:three_prime_UTR |
| GAAACTGGTGAAAACCTTTG+TGG | 0.522843 | 2_1:-54880041 | None:intergenic |
| AATTCAAACCGTTGATGCTG+TGG | 0.531269 | 2_1:-54880090 | None:intergenic |
| CTAAGAAAACTGTAATAGAT+GGG | 0.532894 | 2_1:+54882754 | Msa0212730:three_prime_UTR |
| AGTTGCTGTGGAACTGGCCA+CGG | 0.534656 | 2_1:+54881651 | Msa0212730:intron |
| TTAGGTCGAGAATTAGAGAC+CGG | 0.535827 | 2_1:+54881896 | Msa0212730:intron |
| GTTGCAAGTGAGGTTAAGGC+AGG | 0.541952 | 2_1:+54881673 | Msa0212730:CDS |
| ACCCAACTCATGGACCCTGT+TGG | 0.542471 | 2_1:+54881960 | Msa0212730:CDS |
| CTCTTCTTCAAAACCCACAA+AGG | 0.543400 | 2_1:+54880027 | Msa0212730:CDS |
| TTTCGCAATGAGGGAGCCTA+CGG | 0.547079 | 2_1:+54882499 | Msa0212730:CDS |
| GAGACTCAAAACCCAACTCA+TGG | 0.554759 | 2_1:+54881950 | Msa0212730:CDS |
| GGTGACCGGAACGACGGCGC+CGG | 0.557819 | 2_1:-54879972 | None:intergenic |
| TGCAAGTGAGGTTAAGGCAG+GGG | 0.558585 | 2_1:+54881675 | Msa0212730:CDS |
| TTGATGCTGTGGCGTTGTAA+AGG | 0.559580 | 2_1:-54880079 | None:intergenic |
| CAACCACCATTTCGCAATGA+GGG | 0.563409 | 2_1:+54882490 | Msa0212730:CDS |
| ACTGGCCACGGTTGCAAGTG+AGG | 0.566137 | 2_1:+54881663 | Msa0212730:CDS |
| CGGAACGACGGCGCCGGCGA+GGG | 0.567093 | 2_1:-54879966 | None:intergenic |
| TCATGGACCCTGTTGGACTT+CGG | 0.575861 | 2_1:+54881967 | Msa0212730:CDS |
| TTGGGGATGACCCATTTCGC+CGG | 0.577806 | 2_1:-54879999 | None:intergenic |
| TTTGCTTGTGTGATGAGTGG+AGG | 0.580321 | 2_1:+54882645 | Msa0212730:three_prime_UTR |
| CCGGAACGACGGCGCCGGCG+AGG | 0.581289 | 2_1:-54879967 | None:intergenic |
| TGTTGTGCCTCTAGTTGCTG+TGG | 0.581533 | 2_1:+54881639 | Msa0212730:intron |
| CTTAACCTCACTTGCAACCG+TGG | 0.590346 | 2_1:-54881668 | None:intergenic |
| TGGGTTTGGATAAGCACGGA+GGG | 0.594629 | 2_1:+54882773 | Msa0212730:three_prime_UTR |
| AATCGAGTCCAGTAAACAAG+TGG | 0.595838 | 2_1:-54881721 | None:intergenic |
| GCTCCCTCATTGCGAAATGG+TGG | 0.600231 | 2_1:-54882493 | None:intergenic |
| TTACAACGCCACAGCATCAA+CGG | 0.604274 | 2_1:+54880082 | Msa0212730:CDS |
| TCAACCACCATTTCGCAATG+AGG | 0.606311 | 2_1:+54882489 | Msa0212730:CDS |
| TTTGAAGAAGAGTTGGTTTG+GGG | 0.609746 | 2_1:-54880016 | None:intergenic |
| GACTTTGCTTGTGTGATGAG+TGG | 0.611195 | 2_1:+54882642 | Msa0212730:three_prime_UTR |
| TTATAGAAAGCTCTTTGTGG+GGG | 0.611682 | 2_1:-54882415 | None:intergenic |
| TTGCAAGTGAGGTTAAGGCA+GGG | 0.616058 | 2_1:+54881674 | Msa0212730:CDS |
| TCAACTCTCCTATCCCTCGC+CGG | 0.619293 | 2_1:+54879953 | Msa0212730:CDS |
| ATTATAGAAAGCTCTTTGTG+GGG | 0.619735 | 2_1:-54882416 | None:intergenic |
| AGGCTCATTCCATTCTGGAA+AGG | 0.624965 | 2_1:+54882665 | Msa0212730:three_prime_UTR |
| CACACAAGCAAAGTCTTGTG+TGG | 0.638798 | 2_1:-54882634 | None:intergenic |
| TACCCGATAGCATCAATTTG+GGG | 0.655032 | 2_1:-54881772 | None:intergenic |
| GGTGAAGGTGACCGGAACGA+CGG | 0.660436 | 2_1:-54879978 | None:intergenic |
| TAGGTCGAGAATTAGAGACC+GGG | 0.675536 | 2_1:+54881897 | Msa0212730:intron |
| TGCATCATCTGAGAAACCGT+AGG | 0.677693 | 2_1:-54882515 | None:intergenic |
| AGGGATAGGAGAGTTGAAGA+CGG | 0.682989 | 2_1:-54879947 | None:intergenic |
| TGACTTACCGAAGTCCAACA+GGG | 0.707635 | 2_1:-54881974 | None:intergenic |
| TAGATGGGTTTGGATAAGCA+CGG | 0.708611 | 2_1:+54882769 | Msa0212730:three_prime_UTR |
| ATGGGTTTGGATAAGCACGG+AGG | 0.760565 | 2_1:+54882772 | Msa0212730:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTTTTAAGTTATTC+TGG | + | chr2_1:54880442-54880461 | Msa0212730:intron | 10.0% |
| !! | TTTAATGTTTATACATTATT+TGG | + | chr2_1:54880651-54880670 | Msa0212730:intron | 10.0% |
| !! | ATGAATTATTAAATAACTAT+GGG | + | chr2_1:54881359-54881378 | Msa0212730:CDS | 10.0% |
| !! | ATGAATTTATATAATCACAA+TGG | + | chr2_1:54881198-54881217 | Msa0212730:intron | 15.0% |
| !! | GATGAATTATTAAATAACTA+TGG | + | chr2_1:54881358-54881377 | Msa0212730:CDS | 15.0% |
| !! | TAATGTAAACAAACTTAAAT+TGG | - | chr2_1:54882585-54882604 | None:intergenic | 15.0% |
| !!! | ATTGTTTTTATTCATCAAAT+TGG | + | chr2_1:54882827-54882846 | Msa0212730:three_prime_UTR | 15.0% |
| !!! | AATGAATCAAGTTTAGATTT+TGG | + | chr2_1:54880230-54880249 | Msa0212730:intron | 20.0% |
| !! | TAAGAATCAACATTAAACAA+AGG | - | chr2_1:54881089-54881108 | None:intergenic | 20.0% |
| !!! | TAACAAACTGTATAATTTTC+AGG | + | chr2_1:54881306-54881325 | Msa0212730:intron | 20.0% |
| !! | TGTAAAAAGAAATGTAAACA+AGG | - | chr2_1:54881497-54881516 | None:intergenic | 20.0% |
| !! | AATATATAAAGATCAATGAC+AGG | - | chr2_1:54881803-54881822 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTCTTTGCTCAA+AGG | + | chr2_1:54881839-54881858 | Msa0212730:intron | 20.0% |
| !! | AAATATGGTAAAATTCCAAA+TGG | + | chr2_1:54881928-54881947 | Msa0212730:CDS | 20.0% |
| !!! | TTTATGTTGATTGATTTAGA+AGG | - | chr2_1:54882206-54882225 | None:intergenic | 20.0% |
| !!! | TATAATTTGGAAGAGTTTTA+TGG | + | chr2_1:54882433-54882452 | Msa0212730:CDS | 20.0% |
| ! | CAAAATATCTTCACTTTCAA+TGG | - | chr2_1:54880259-54880278 | None:intergenic | 25.0% |
| !! | CAAATGTTTTATAGGATTGA+AGG | + | chr2_1:54880337-54880356 | Msa0212730:intron | 25.0% |
| ! | TTATTCTGGTGTTTATGTTT+AGG | + | chr2_1:54880456-54880475 | Msa0212730:intron | 25.0% |
| ! | GATTCAGAATAAGATGTTTA+AGG | + | chr2_1:54880597-54880616 | Msa0212730:intron | 25.0% |
| ! | GTAAAATGTTAACTGAGATA+AGG | + | chr2_1:54880703-54880722 | Msa0212730:intron | 25.0% |
| ! | AGATAAGAGTTTATAAAGAG+AGG | + | chr2_1:54880866-54880885 | Msa0212730:intron | 25.0% |
| !!! | TGGTTTGGTTTTTAAAACAT+TGG | + | chr2_1:54880977-54880996 | Msa0212730:intron | 25.0% |
| !!! | AGTTTTGGTAGTTAAAATTC+AGG | - | chr2_1:54881116-54881135 | None:intergenic | 25.0% |
| ! | GACTAAAACAAATACGTAAT+AGG | - | chr2_1:54881156-54881175 | None:intergenic | 25.0% |
| ! | ATAAAATGCAGACAATTAGA+GGG | - | chr2_1:54882018-54882037 | None:intergenic | 25.0% |
| ! | TATAAAATGCAGACAATTAG+AGG | - | chr2_1:54882019-54882038 | None:intergenic | 25.0% |
| !!! | TGATTTAGAAGGTTTTGATA+GGG | - | chr2_1:54882195-54882214 | None:intergenic | 25.0% |
| !!! | TTGATTTAGAAGGTTTTGAT+AGG | - | chr2_1:54882196-54882215 | None:intergenic | 25.0% |
| !! | TTATGTCAAATATAGGCTTT+TGG | - | chr2_1:54882247-54882266 | None:intergenic | 25.0% |
| ! | CTTCTGATTATGTCAAATAT+AGG | - | chr2_1:54882254-54882273 | None:intergenic | 25.0% |
| ! | TATTGCAACATAAATTGCAT+CGG | + | chr2_1:54882276-54882295 | Msa0212730:intron | 25.0% |
| ! | AATTATAGAAAGCTCTTTGT+GGG | - | chr2_1:54882420-54882439 | None:intergenic | 25.0% |
| ! | AAATTATAGAAAGCTCTTTG+TGG | - | chr2_1:54882421-54882440 | None:intergenic | 25.0% |
| ! | ACAAAGAGCTTTCTATAATT+TGG | + | chr2_1:54882420-54882439 | Msa0212730:CDS | 25.0% |
| !! | TTTTTCTTTCTTTCTTAGCA+TGG | + | chr2_1:54882723-54882742 | Msa0212730:three_prime_UTR | 25.0% |
| !! | ATCTATTACAGTTTTCTTAG+AGG | - | chr2_1:54882754-54882773 | None:intergenic | 25.0% |
| ! | TCTAAGAAAACTGTAATAGA+TGG | + | chr2_1:54882753-54882772 | Msa0212730:three_prime_UTR | 25.0% |
| ! | CTAAGAAAACTGTAATAGAT+GGG | + | chr2_1:54882754-54882773 | Msa0212730:three_prime_UTR | 25.0% |
| !! | TTTTGAAGAAGAGTTGGTTT+GGG | - | chr2_1:54880020-54880039 | None:intergenic | 30.0% |
| TTTCACCAGTTTCTACAAAA+AGG | + | chr2_1:54880051-54880070 | Msa0212730:CDS | 30.0% | |
| ! | ACTCTTTTGAACTTTGCTTT+CGG | + | chr2_1:54880127-54880146 | Msa0212730:CDS | 30.0% |
| TATTTGGATGATGACTATAC+AGG | + | chr2_1:54880667-54880686 | Msa0212730:intron | 30.0% | |
| AATGTTAACTGAGATAAGGT+TGG | + | chr2_1:54880707-54880726 | Msa0212730:intron | 30.0% | |
| AAATAACCGAACCATAGTAA+AGG | - | chr2_1:54880745-54880764 | None:intergenic | 30.0% | |
| !!! | TTACTATGGTTCGGTTATTT+TGG | + | chr2_1:54880745-54880764 | Msa0212730:intron | 30.0% |
| !! | TACTTTAAAGCGCTCAAATT+GGG | - | chr2_1:54880791-54880810 | None:intergenic | 30.0% |
| ! | TAGTCCTATCTTTTAAACGT+GGG | - | chr2_1:54880845-54880864 | None:intergenic | 30.0% |
| ! | ATAGTCCTATCTTTTAAACG+TGG | - | chr2_1:54880846-54880865 | None:intergenic | 30.0% |
| ! | ACAATTTCTAGACACTAAAG+AGG | - | chr2_1:54881041-54881060 | None:intergenic | 30.0% |
| TTAACTACCAAAACTGAGAA+TGG | + | chr2_1:54881121-54881140 | Msa0212730:intron | 30.0% | |
| TTAATGAGAATTGCCAATCA+CGG | - | chr2_1:54881275-54881294 | None:intergenic | 30.0% | |
| TGATTGGCAATTCTCATTAA+GGG | + | chr2_1:54881275-54881294 | Msa0212730:intron | 30.0% | |
| TTGTTATCAGCTTACATGAT+AGG | - | chr2_1:54881450-54881469 | None:intergenic | 30.0% | |
| ACATGTATGTGTCTTATATC+AGG | + | chr2_1:54881529-54881548 | Msa0212730:intron | 30.0% | |
| TACCAAACAAGATACATGAT+AGG | - | chr2_1:54882310-54882329 | None:intergenic | 30.0% | |
| AAACAATCATAACATGAACC+TGG | - | chr2_1:54882358-54882377 | None:intergenic | 30.0% | |
| ! | TATGATTGTTTCTTGATCAC+AGG | + | chr2_1:54882367-54882386 | Msa0212730:intron | 30.0% |
| ATTATAGAAAGCTCTTTGTG+GGG | - | chr2_1:54882419-54882438 | None:intergenic | 30.0% | |
| !! | GTTTTATGGTAATGCAACAT+CGG | + | chr2_1:54882447-54882466 | Msa0212730:CDS | 30.0% |
| ! | TATCATTTTCCTTTCCAGAA+TGG | - | chr2_1:54882677-54882696 | None:intergenic | 30.0% |
| ! | AAAACTGTAATAGATGGGTT+TGG | + | chr2_1:54882759-54882778 | Msa0212730:three_prime_UTR | 30.0% |
| !! | TTTGAAGAAGAGTTGGTTTG+GGG | - | chr2_1:54880019-54880038 | None:intergenic | 35.0% |
| !!! | GTTTTGAAGAAGAGTTGGTT+TGG | - | chr2_1:54880021-54880040 | None:intergenic | 35.0% |
| AAACTGGTGAAAACCTTTGT+GGG | - | chr2_1:54880043-54880062 | None:intergenic | 35.0% | |
| ACGGTTTGAATTTGAAGAGA+AGG | + | chr2_1:54880101-54880120 | Msa0212730:CDS | 35.0% | |
| ATGCAATTTAGAAAACCTCG+AGG | + | chr2_1:54880311-54880330 | Msa0212730:intron | 35.0% | |
| ATAAAACATTTGTCTCCTCG+AGG | - | chr2_1:54880329-54880348 | None:intergenic | 35.0% | |
| ! | CGAGGAGACAAATGTTTTAT+AGG | + | chr2_1:54880329-54880348 | Msa0212730:intron | 35.0% |
| GTTAGTGCTTCATAGTTCAT+AGG | + | chr2_1:54880491-54880510 | Msa0212730:intron | 35.0% | |
| !!! | TATTTTGGCAGTTTGATCAG+TGG | + | chr2_1:54880760-54880779 | Msa0212730:intron | 35.0% |
| !! | CTACTTTAAAGCGCTCAAAT+TGG | - | chr2_1:54880792-54880811 | None:intergenic | 35.0% |
| ! | ATCTTTTAAACGTGGGACTT+GGG | - | chr2_1:54880838-54880857 | None:intergenic | 35.0% |
| ! | TATCTTTTAAACGTGGGACT+TGG | - | chr2_1:54880839-54880858 | None:intergenic | 35.0% |
| AAGTCCCACGTTTAAAAGAT+AGG | + | chr2_1:54880838-54880857 | Msa0212730:intron | 35.0% | |
| ! | CTAGATTCCATTCTCAGTTT+TGG | - | chr2_1:54881131-54881150 | None:intergenic | 35.0% |
| GTGATTGGCAATTCTCATTA+AGG | + | chr2_1:54881274-54881293 | Msa0212730:intron | 35.0% | |
| ATACCCGATAGCATCAATTT+GGG | - | chr2_1:54881776-54881795 | None:intergenic | 35.0% | |
| ! | TACCATATTTCTTTTCAGCC+CGG | - | chr2_1:54881918-54881937 | None:intergenic | 35.0% |
| TCTAGAAGTTATGTCTTTGC+TGG | - | chr2_1:54882092-54882111 | None:intergenic | 35.0% | |
| ATAATCAGAAGCAAAGATGC+AGG | + | chr2_1:54882140-54882159 | Msa0212730:intron | 35.0% | |
| AAGAGGTTAGAATCATGTTG+AGG | - | chr2_1:54882169-54882188 | None:intergenic | 35.0% | |
| !!! | CAAATATAGGCTTTTGGAAC+TGG | - | chr2_1:54882241-54882260 | None:intergenic | 35.0% |
| GTCCTATCATGTATCTTGTT+TGG | + | chr2_1:54882305-54882324 | Msa0212730:intron | 35.0% | |
| TCAGACTGTATTCAGAAACA+CGG | - | chr2_1:54882334-54882353 | None:intergenic | 35.0% | |
| TTTGTGGGGGAAGAAATAAA+TGG | - | chr2_1:54882405-54882424 | None:intergenic | 35.0% | |
| TTATAGAAAGCTCTTTGTGG+GGG | - | chr2_1:54882418-54882437 | None:intergenic | 35.0% | |
| !! | AATGGTGGTTGATTTTCGAA+AGG | - | chr2_1:54882481-54882500 | None:intergenic | 35.0% |
| CTTAAATTGGCAGCGATTAT+CGG | - | chr2_1:54882572-54882591 | None:intergenic | 35.0% | |
| ! | AAGACGGTATCATTTTGTCG+CGG | - | chr2_1:54879934-54879953 | None:intergenic | 40.0% |
| !!! | TGTGGGTTTTGAAGAAGAGT+TGG | - | chr2_1:54880026-54880045 | None:intergenic | 40.0% |
| CTCTTCTTCAAAACCCACAA+AGG | + | chr2_1:54880027-54880046 | Msa0212730:CDS | 40.0% | |
| GAAACTGGTGAAAACCTTTG+TGG | - | chr2_1:54880044-54880063 | None:intergenic | 40.0% | |
| ! | ATGCGCCTTTTTGTAGAAAC+TGG | - | chr2_1:54880059-54880078 | None:intergenic | 40.0% |
| AATTCAAACCGTTGATGCTG+TGG | - | chr2_1:54880093-54880112 | None:intergenic | 40.0% | |
| AGCCAATGACAACTCTTTCT+CGG | + | chr2_1:54880156-54880175 | Msa0212730:CDS | 40.0% | |
| TACCGAGAAAGAGTTGTCAT+TGG | - | chr2_1:54880161-54880180 | None:intergenic | 40.0% | |
| AGTGCTTCATAGTTCATAGG+AGG | + | chr2_1:54880494-54880513 | Msa0212730:intron | 40.0% | |
| CCTTACAAAACCAGCTTGTA+AGG | - | chr2_1:54880901-54880920 | None:intergenic | 40.0% | |
| !!! | CCTTACAAGCTGGTTTTGTA+AGG | + | chr2_1:54880898-54880917 | Msa0212730:intron | 40.0% |
| AGGGGAAAAAGTTGTGGTTT+GGG | - | chr2_1:54881012-54881031 | None:intergenic | 40.0% | |
| AAGGGGAAAAAGTTGTGGTT+TGG | - | chr2_1:54881013-54881032 | None:intergenic | 40.0% | |
| AGATGAAGGGGAAAAAGTTG+TGG | - | chr2_1:54881018-54881037 | None:intergenic | 40.0% | |
| ACACTAAAGAGGAGATGAAG+GGG | - | chr2_1:54881030-54881049 | None:intergenic | 40.0% | |
| GACACTAAAGAGGAGATGAA+GGG | - | chr2_1:54881031-54881050 | None:intergenic | 40.0% | |
| AGACACTAAAGAGGAGATGA+AGG | - | chr2_1:54881032-54881051 | None:intergenic | 40.0% | |
| TTGTGAAGCCACTTGTTTAC+TGG | + | chr2_1:54881713-54881732 | Msa0212730:CDS | 40.0% | |
| AATCGAGTCCAGTAAACAAG+TGG | - | chr2_1:54881724-54881743 | None:intergenic | 40.0% | |
| TACCCGATAGCATCAATTTG+GGG | - | chr2_1:54881775-54881794 | None:intergenic | 40.0% | |
| CATACCCGATAGCATCAATT+TGG | - | chr2_1:54881777-54881796 | None:intergenic | 40.0% | |
| CAAATTGATGCTATCGGGTA+TGG | + | chr2_1:54881775-54881794 | Msa0212730:intron | 40.0% | |
| TTAGGTCGAGAATTAGAGAC+CGG | + | chr2_1:54881896-54881915 | Msa0212730:intron | 40.0% | |
| !!! | TTGGGTTTTGAGTCTCCATT+TGG | - | chr2_1:54881946-54881965 | None:intergenic | 40.0% |
| AGTGCAATGGGAAACATCAA+TGG | - | chr2_1:54882050-54882069 | None:intergenic | 40.0% | |
| !! | AGGTTTTGATAGGGACAAAG+AGG | - | chr2_1:54882186-54882205 | None:intergenic | 40.0% |
| TTCTGAATACAGTCTGATCC+AGG | + | chr2_1:54882337-54882356 | Msa0212730:intron | 40.0% | |
| CAGTTGATTGATTGTCAGCT+TGG | + | chr2_1:54882540-54882559 | Msa0212730:exon | 40.0% | |
| ! | TAGATGGGTTTGGATAAGCA+CGG | + | chr2_1:54882769-54882788 | Msa0212730:three_prime_UTR | 40.0% |
| AGGGATAGGAGAGTTGAAGA+CGG | - | chr2_1:54879950-54879969 | None:intergenic | 45.0% | |
| TTGATGCTGTGGCGTTGTAA+AGG | - | chr2_1:54880082-54880101 | None:intergenic | 45.0% | |
| TTACAACGCCACAGCATCAA+CGG | + | chr2_1:54880082-54880101 | Msa0212730:CDS | 45.0% | |
| ACCATAGTAAAGGCCACGAT+CGG | - | chr2_1:54880735-54880754 | None:intergenic | 45.0% | |
| TCGTGGCCTTTACTATGGTT+CGG | + | chr2_1:54880736-54880755 | Msa0212730:intron | 45.0% | |
| !!! | ACGTGGGACTTGGGTTTTTT+CGG | - | chr2_1:54880829-54880848 | None:intergenic | 45.0% |
| CAAAACCAGCTTGTAAGGTG+TGG | - | chr2_1:54880896-54880915 | None:intergenic | 45.0% | |
| ! | TGGAGCGTAGCGTTGAAATT+GGG | - | chr2_1:54880935-54880954 | None:intergenic | 45.0% |
| TTGCAAGTGAGGTTAAGGCA+GGG | + | chr2_1:54881674-54881693 | Msa0212730:CDS | 45.0% | |
| GGTTAAGGCAGGGGATATAA+AGG | + | chr2_1:54881684-54881703 | Msa0212730:CDS | 45.0% | |
| CGTCCCCAAATTGATGCTAT+CGG | + | chr2_1:54881769-54881788 | Msa0212730:CDS | 45.0% | |
| GTCCCCAAATTGATGCTATC+GGG | + | chr2_1:54881770-54881789 | Msa0212730:CDS | 45.0% | |
| TAGGTCGAGAATTAGAGACC+GGG | + | chr2_1:54881897-54881916 | Msa0212730:intron | 45.0% | |
| GACCGGGCTGAAAAGAAATA+TGG | + | chr2_1:54881913-54881932 | Msa0212730:CDS | 45.0% | |
| GAGACTCAAAACCCAACTCA+TGG | + | chr2_1:54881950-54881969 | Msa0212730:CDS | 45.0% | |
| TGACTTACCGAAGTCCAACA+GGG | - | chr2_1:54881977-54881996 | None:intergenic | 45.0% | |
| ATGACTTACCGAAGTCCAAC+AGG | - | chr2_1:54881978-54881997 | None:intergenic | 45.0% | |
| ! | TCCCATTGCACTTCTAGAAG+AGG | + | chr2_1:54882058-54882077 | Msa0212730:intron | 45.0% |
| ! | GCCTCTTCTAGAAGTGCAAT+GGG | - | chr2_1:54882062-54882081 | None:intergenic | 45.0% |
| ! | TGCCTCTTCTAGAAGTGCAA+TGG | - | chr2_1:54882063-54882082 | None:intergenic | 45.0% |
| TCAACCACCATTTCGCAATG+AGG | + | chr2_1:54882489-54882508 | Msa0212730:CDS | 45.0% | |
| CAACCACCATTTCGCAATGA+GGG | + | chr2_1:54882490-54882509 | Msa0212730:CDS | 45.0% | |
| TGCATCATCTGAGAAACCGT+AGG | - | chr2_1:54882518-54882537 | None:intergenic | 45.0% | |
| ! | CACACAAGCAAAGTCTTGTG+TGG | - | chr2_1:54882637-54882656 | None:intergenic | 45.0% |
| GACTTTGCTTGTGTGATGAG+TGG | + | chr2_1:54882642-54882661 | Msa0212730:three_prime_UTR | 45.0% | |
| TTTGCTTGTGTGATGAGTGG+AGG | + | chr2_1:54882645-54882664 | Msa0212730:three_prime_UTR | 45.0% | |
| ! | AGGCTCATTCCATTCTGGAA+AGG | + | chr2_1:54882665-54882684 | Msa0212730:three_prime_UTR | 45.0% |
| !! | AAATAAAATTCAATATAAAT+AGG | - | chr2_1:54881878-54881897 | None:intergenic | 5.0% |
| !!! | ATTTATATTGAATTTTATTT+AGG | + | chr2_1:54881878-54881897 | Msa0212730:intron | 5.0% |
| ! | GATAAGGTTGGTTCCGATCG+TGG | + | chr2_1:54880719-54880738 | Msa0212730:intron | 50.0% |
| TCCGATCGTGGCCTTTACTA+TGG | + | chr2_1:54880731-54880750 | Msa0212730:intron | 50.0% | |
| !!! | CGTGGGACTTGGGTTTTTTC+GGG | - | chr2_1:54880828-54880847 | None:intergenic | 50.0% |
| GCATTCCACACCTTACAAGC+TGG | + | chr2_1:54880888-54880907 | Msa0212730:intron | 50.0% | |
| ! | CTGGAGCGTAGCGTTGAAAT+TGG | - | chr2_1:54880936-54880955 | None:intergenic | 50.0% |
| CAACACACCAGTGAGAGATC+TGG | - | chr2_1:54880955-54880974 | None:intergenic | 50.0% | |
| TCTCTCACTGGTGTGTTGTC+TGG | + | chr2_1:54880957-54880976 | Msa0212730:intron | 50.0% | |
| CACTGGTGTGTTGTCTGGTT+TGG | + | chr2_1:54880962-54880981 | Msa0212730:intron | 50.0% | |
| ! | TCTCTGCACTTGCAGGCTTT+TGG | - | chr2_1:54881408-54881427 | None:intergenic | 50.0% |
| TCGTCAATCTCTGCACTTGC+AGG | - | chr2_1:54881415-54881434 | None:intergenic | 50.0% | |
| TGTTGTGCCTCTAGTTGCTG+TGG | + | chr2_1:54881639-54881658 | Msa0212730:intron | 50.0% | |
| CTTAACCTCACTTGCAACCG+TGG | - | chr2_1:54881671-54881690 | None:intergenic | 50.0% | |
| CACGGTTGCAAGTGAGGTTA+AGG | + | chr2_1:54881669-54881688 | Msa0212730:CDS | 50.0% | |
| GTTGCAAGTGAGGTTAAGGC+AGG | + | chr2_1:54881673-54881692 | Msa0212730:CDS | 50.0% | |
| TGCAAGTGAGGTTAAGGCAG+GGG | + | chr2_1:54881675-54881694 | Msa0212730:CDS | 50.0% | |
| TCCAACAGGGTCCATGAGTT+GGG | - | chr2_1:54881964-54881983 | None:intergenic | 50.0% | |
| TCATGGACCCTGTTGGACTT+CGG | + | chr2_1:54881967-54881986 | Msa0212730:CDS | 50.0% | |
| TAGGCTCCCTCATTGCGAAA+TGG | - | chr2_1:54882499-54882518 | None:intergenic | 50.0% | |
| TTTCGCAATGAGGGAGCCTA+CGG | + | chr2_1:54882499-54882518 | Msa0212730:CDS | 50.0% | |
| AGTGGAGGCTCATTCCATTC+TGG | + | chr2_1:54882660-54882679 | Msa0212730:three_prime_UTR | 50.0% | |
| ATGGGTTTGGATAAGCACGG+AGG | + | chr2_1:54882772-54882791 | Msa0212730:three_prime_UTR | 50.0% | |
| TGGGTTTGGATAAGCACGGA+GGG | + | chr2_1:54882773-54882792 | Msa0212730:three_prime_UTR | 50.0% | |
| TTTGGATAAGCACGGAGGGA+AGG | + | chr2_1:54882777-54882796 | Msa0212730:three_prime_UTR | 50.0% | |
| TTGGATAAGCACGGAGGGAA+GGG | + | chr2_1:54882778-54882797 | Msa0212730:three_prime_UTR | 50.0% | |
| TCAACTCTCCTATCCCTCGC+CGG | + | chr2_1:54879953-54879972 | Msa0212730:CDS | 55.0% | |
| ATTTCGCCGGTGAAGGTGAC+CGG | - | chr2_1:54879989-54880008 | None:intergenic | 55.0% | |
| GTCACCTTCACCGGCGAAAT+GGG | + | chr2_1:54879989-54880008 | Msa0212730:CDS | 55.0% | |
| ATGACCCATTTCGCCGGTGA+AGG | - | chr2_1:54879996-54880015 | None:intergenic | 55.0% | |
| TTGGGGATGACCCATTTCGC+CGG | - | chr2_1:54880002-54880021 | None:intergenic | 55.0% | |
| CTACGCTCCAGATCTCTCAC+TGG | + | chr2_1:54880945-54880964 | Msa0212730:intron | 55.0% | |
| ATTGCCAATCACGGAACGCG+TGG | - | chr2_1:54881266-54881285 | None:intergenic | 55.0% | |
| GCCTCTAGTTGCTGTGGAAC+TGG | + | chr2_1:54881645-54881664 | Msa0212730:intron | 55.0% | |
| GCCAGTTCCACAGCAACTAG+AGG | - | chr2_1:54881649-54881668 | None:intergenic | 55.0% | |
| AGTTGCTGTGGAACTGGCCA+CGG | + | chr2_1:54881651-54881670 | Msa0212730:intron | 55.0% | |
| ACCCAACTCATGGACCCTGT+TGG | + | chr2_1:54881960-54881979 | Msa0212730:CDS | 55.0% | |
| GTCCAACAGGGTCCATGAGT+TGG | - | chr2_1:54881965-54881984 | None:intergenic | 55.0% | |
| GCTCCCTCATTGCGAAATGG+TGG | - | chr2_1:54882496-54882515 | None:intergenic | 55.0% | |
| TGGATAAGCACGGAGGGAAG+GGG | + | chr2_1:54882779-54882798 | Msa0212730:three_prime_UTR | 55.0% | |
| GGTGAAGGTGACCGGAACGA+CGG | - | chr2_1:54879981-54880000 | None:intergenic | 60.0% | |
| GTCGTTCCGGTCACCTTCAC+CGG | + | chr2_1:54879980-54879999 | Msa0212730:CDS | 60.0% | |
| GGTCACCTTCACCGGCGAAA+TGG | + | chr2_1:54879988-54880007 | Msa0212730:CDS | 60.0% | |
| CGCGTGGCAGGTAGAAAAGC+AGG | - | chr2_1:54881250-54881269 | None:intergenic | 60.0% | |
| ACTGGCCACGGTTGCAAGTG+AGG | + | chr2_1:54881663-54881682 | Msa0212730:CDS | 60.0% | |
| CCAATCACGGAACGCGTGGC+AGG | - | chr2_1:54881262-54881281 | None:intergenic | 65.0% | |
| CCTGCCACGCGTTCCGTGAT+TGG | + | chr2_1:54881259-54881278 | Msa0212730:intron | 65.0% | |
| GGTGACCGGAACGACGGCGC+CGG | - | chr2_1:54879975-54879994 | None:intergenic | 75.0% | |
| !!! | CGACGGCGCCGGCGAGGGAT+AGG | - | chr2_1:54879964-54879983 | None:intergenic | 80.0% |
| !!! | CGGAACGACGGCGCCGGCGA+GGG | - | chr2_1:54879969-54879988 | None:intergenic | 80.0% |
| ! | CCTCGCCGGCGCCGTCGTTC+CGG | + | chr2_1:54879967-54879986 | Msa0212730:CDS | 80.0% |
| !!! | CCGGAACGACGGCGCCGGCG+AGG | - | chr2_1:54879970-54879989 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 54879889 | 54882905 | 54879889 | ID=Msa0212730;Name=Msa0212730 |
| chr2_1 | mRNA | 54879889 | 54882905 | 54879889 | ID=Msa0212730-mRNA-1;Parent=Msa0212730;Name=Msa0212730-mRNA-1;_AED=0.07;_eAED=0.07;_QI=52|1|1|1|1|1|5|359|249 |
| chr2_1 | exon | 54879889 | 54880177 | 54879889 | ID=Msa0212730-mRNA-1:exon:15196;Parent=Msa0212730-mRNA-1 |
| chr2_1 | exon | 54881328 | 54881454 | 54881328 | ID=Msa0212730-mRNA-1:exon:15197;Parent=Msa0212730-mRNA-1 |
| chr2_1 | exon | 54881653 | 54881791 | 54881653 | ID=Msa0212730-mRNA-1:exon:15198;Parent=Msa0212730-mRNA-1 |
| chr2_1 | exon | 54881900 | 54881988 | 54881900 | ID=Msa0212730-mRNA-1:exon:15199;Parent=Msa0212730-mRNA-1 |
| chr2_1 | exon | 54882389 | 54882905 | 54882389 | ID=Msa0212730-mRNA-1:exon:15200;Parent=Msa0212730-mRNA-1 |
| chr2_1 | five_prime_UTR | 54879889 | 54879940 | 54879889 | ID=Msa0212730-mRNA-1:five_prime_utr;Parent=Msa0212730-mRNA-1 |
| chr2_1 | CDS | 54879941 | 54880177 | 54879941 | ID=Msa0212730-mRNA-1:cds;Parent=Msa0212730-mRNA-1 |
| chr2_1 | CDS | 54881328 | 54881454 | 54881328 | ID=Msa0212730-mRNA-1:cds;Parent=Msa0212730-mRNA-1 |
| chr2_1 | CDS | 54881653 | 54881791 | 54881653 | ID=Msa0212730-mRNA-1:cds;Parent=Msa0212730-mRNA-1 |
| chr2_1 | CDS | 54881900 | 54881988 | 54881900 | ID=Msa0212730-mRNA-1:cds;Parent=Msa0212730-mRNA-1 |
| chr2_1 | CDS | 54882389 | 54882546 | 54882389 | ID=Msa0212730-mRNA-1:cds;Parent=Msa0212730-mRNA-1 |
| chr2_1 | three_prime_UTR | 54882547 | 54882905 | 54882547 | ID=Msa0212730-mRNA-1:three_prime_utr;Parent=Msa0212730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
