AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0378670

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0378670 MtrunA17_Chr3g0131711 99.458 922 5 0 1 922 1 922 0.0 1854
Msa0378670 MtrunA17_Chr8g0385811 90.281 926 86 2 1 922 1 926 0.0 1661
Msa0378670 MtrunA17_Chr3g0134631 90.076 927 87 3 1 922 1 927 0.0 1652
Msa0378670 MtrunA17_Chr3g0135231 72.431 613 133 7 1 604 1 586 0.0 842
Msa0378670 MtrunA17_Chr3g0135231 68.966 116 26 1 710 825 545 650 8.84e-39 154
Msa0378670 MtrunA17_Chr3g0102771 51.208 869 305 12 91 916 1 793 0.0 835
Msa0378670 MtrunA17_Chr3g0131351 47.126 870 409 14 91 916 100 962 0.0 763
Msa0378670 MtrunA17_Chr3g0137071 44.751 905 397 16 67 898 75 949 0.0 723
Msa0378670 MtrunA17_Chr7g0218421 44.773 880 387 14 93 898 86 940 0.0 720
Msa0378670 MtrunA17_Chr6g0454071 42.919 925 418 18 73 916 55 950 0.0 691
Msa0378670 MtrunA17_Chr4g0061371 41.961 877 420 15 93 902 4 858 0.0 650
Msa0378670 MtrunA17_Chr7g0225161 42.386 880 415 18 94 905 5 860 0.0 620
Msa0378670 MtrunA17_Chr2g0329561 41.818 330 175 3 577 905 143 456 1.38e-78 263
Msa0378670 MtrunA17_Chr2g0277781 44.257 296 147 4 577 870 2 281 2.92e-77 254
Msa0378670 MtrunA17_Chr1g0188061 74.797 123 28 1 124 243 20 142 4.33e-48 174
Msa0378670 MtrunA17_Chr1g0188061 65.891 129 33 2 665 793 232 349 5.77e-42 157
Msa0378670 MtrunA17_Chr1g0188061 48.913 92 17 1 410 501 153 214 3.01e-16 81.3
Msa0378670 MtrunA17_Chr7g0260931 50.000 84 42 0 574 657 11 94 1.47e-23 95.9
Msa0378670 MtrunA17_Chr2g0277771 31.373 153 88 3 754 905 1 137 5.47e-16 77.0
Msa0378670 MtrunA17_Chr5g0398561 28.571 161 105 4 68 220 56 214 3.00e-14 73.2
Msa0378670 MtrunA17_Chr4g0073021 28.743 167 108 3 592 757 658 814 2.64e-12 71.2
Msa0378670 MtrunA17_Chr6g0475931 31.496 127 85 1 94 218 89 215 2.06e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0378670 AT5G50920.1 88.013 926 100 4 3 919 6 929 0.0 1589
Msa0378670 AT3G48870.2 85.779 879 125 0 33 911 25 903 0.0 1497
Msa0378670 AT3G48870.1 85.779 879 125 0 33 911 56 934 0.0 1496
Msa0378670 AT3G48870.4 85.779 879 125 0 33 911 56 934 0.0 1496
Msa0378670 AT3G48870.3 85.779 879 125 0 33 911 56 934 0.0 1496
Msa0378670 AT5G51070.1 48.677 869 390 13 79 902 67 924 0.0 782
Msa0378670 AT5G15450.1 45.205 876 388 13 93 898 80 933 0.0 715
Msa0378670 AT2G25140.1 44.570 884 396 13 95 905 88 950 0.0 714
Msa0378670 AT1G74310.1 42.466 876 402 15 93 896 4 849 0.0 660
Msa0378670 AT1G74310.2 42.908 839 377 15 93 859 4 812 0.0 637
Msa0378670 AT4G14670.1 43.739 567 242 9 186 695 77 623 7.56e-143 438
Msa0378670 AT3G45450.1 61.370 365 94 7 91 453 1 320 1.66e-125 383
Msa0378670 AT4G30350.1 30.675 163 103 2 595 757 568 720 6.36e-12 70.1

Find 285 sgRNAs with CRISPR-Local

Find 512 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGACTGTATTCCTAGTTTA+TGG 0.129930 3_1:+79512297 Msa0378670:three_prime_UTR
TCTTGACATGAGTGAGTTTA+TGG 0.134853 3_1:+79511065 Msa0378670:CDS
CTTCCACTCGTGCATCTTTA+AGG 0.139989 3_1:-79506474 None:intergenic
TTCAAGTAACAGAAAGATTT+AGG 0.174960 3_1:+79511583 Msa0378670:CDS
TTCTGCGAGCTTGGTCAAAT+TGG 0.206976 3_1:-79507753 None:intergenic
TGGTGCGACGGCCTAAAATT+TGG 0.209026 3_1:-79507918 None:intergenic
CACACTGTCTCCAAACTTAT+TGG 0.210042 3_1:+79511093 Msa0378670:CDS
ATTTCAGGGCACAATTATAT+TGG 0.228980 3_1:+79507430 Msa0378670:intron
GGGAATCATGGCTCGGGTTT+TGG 0.234926 3_1:+79506033 Msa0378670:exon
CGCATGATGGCTCTTCTTAA+AGG 0.235677 3_1:-79511651 None:intergenic
AAGAGCCATCATGCGACTTT+TGG 0.245921 3_1:+79511659 Msa0378670:CDS
CAGATTCTACTGGGTCTTAT+TGG 0.247254 3_1:+79506403 Msa0378670:CDS
AGCAAATCAAGTTCAGAAAA+AGG 0.253058 3_1:+79511957 Msa0378670:three_prime_UTR
GATGAAGTGCACACACTAAT+TGG 0.268640 3_1:+79508546 Msa0378670:CDS
GTGGAAGTGGAGAAGATAAT+TGG 0.274857 3_1:+79506490 Msa0378670:CDS
ATCTTCATCCATGGCTATTT+CGG 0.281475 3_1:+79512075 Msa0378670:three_prime_UTR
CTCAAATTTCCCTGAATTTG+TGG 0.296159 3_1:-79512219 None:intergenic
AATAAATGCAGCCGGATATT+CGG 0.297717 3_1:+79506012 Msa0378670:intron
AACTTTCATACCAGTATATC+AGG 0.299224 3_1:+79509185 Msa0378670:CDS
TGTATGACAACCACAAATTC+AGG 0.303508 3_1:+79512209 Msa0378670:three_prime_UTR
GTGATAAAGAAATGGATCTA+AGG 0.316162 3_1:+79510662 Msa0378670:CDS
GCATTGGCTGCCTACTACTT+TGG 0.322084 3_1:+79511021 Msa0378670:CDS
GTTGGTTCTGGTACTTTAAC+TGG 0.328169 3_1:-79509064 None:intergenic
GGATCAGAACACTTGCTTCT+AGG 0.330589 3_1:+79507451 Msa0378670:CDS
CGCTTTGCACGAGGAGTAAA+CGG 0.343489 3_1:-79506544 None:intergenic
GGTGCGACGGCCTAAAATTT+GGG 0.348667 3_1:-79507917 None:intergenic
GCTCAGTCGATTAATGTTCC+TGG 0.349711 3_1:+79506055 Msa0378670:CDS
GGGATAGGGGAAAACCAAAA+AGG 0.350036 3_1:+79512002 Msa0378670:three_prime_UTR
CCGTTAGTCTTCCATCTTCA+AGG 0.351323 3_1:-79511251 None:intergenic
TGTACAGGGTTGCATGTCTT+AGG 0.356462 3_1:+79512265 Msa0378670:three_prime_UTR
TCAAGTAACAGAAAGATTTA+GGG 0.359184 3_1:+79511584 Msa0378670:CDS
ACACCAACTTTGGAGGAGTA+TGG 0.360599 3_1:+79507728 Msa0378670:CDS
TAAACAGTATGATGCTCTAT+TGG 0.360807 3_1:-79505127 None:intergenic
CAAGGAGGTGCTTGCTGATA+AGG 0.361145 3_1:-79505305 None:intergenic
AAGCTAGCAATTGGACGGTT+AGG 0.361474 3_1:-79510952 None:intergenic
ATAAATGCAGCCGGATATTC+GGG 0.362730 3_1:+79506013 Msa0378670:intron
ACTTCGTACTATCAATCATT+TGG 0.363357 3_1:+79506192 Msa0378670:CDS
TTAAATATTATGCAGTGTAT+TGG 0.363497 3_1:+79508974 Msa0378670:intron
GTTTCATCAACAGTTGGTTC+TGG 0.366287 3_1:-79509076 None:intergenic
TTTCAGGCAACTCACAAAAC+TGG 0.379537 3_1:+79511491 Msa0378670:CDS
GACATGCAACCCTGTACATT+GGG 0.380682 3_1:-79512260 None:intergenic
AGGAGGTGAACCAATAAGTT+TGG 0.381503 3_1:-79511103 None:intergenic
AATAAAATTGTGGTGGCAAA+TGG 0.381512 3_1:-79505220 None:intergenic
TGGAATCGTCTCTCCAAAGC+TGG 0.385694 3_1:-79509040 None:intergenic
AGCAGCATCAATTGCACCTT+CGG 0.387475 3_1:-79508580 None:intergenic
AAGATAATTGGAAGAGGTAG+TGG 0.390234 3_1:+79506502 Msa0378670:CDS
TCGACAAGTAAAACATACTA+TGG 0.391976 3_1:-79511880 None:intergenic
GTTAACATTATAGGAATAAG+TGG 0.399890 3_1:+79511981 Msa0378670:three_prime_UTR
TCATGACAAACCTGATATAC+TGG 0.400165 3_1:-79509195 None:intergenic
AAGTCCTTTCAGTATTTGTA+TGG 0.403240 3_1:-79509098 None:intergenic
CCTTGTCTTATTGGAGAACC+TGG 0.409018 3_1:+79507949 Msa0378670:CDS
GAGAAAGGAGGTCGCCGAAT+TGG 0.410502 3_1:+79511348 Msa0378670:CDS
AATCAAATCAATGGCTTTGT+CGG 0.411132 3_1:-79509899 None:intergenic
CTTGATTTGCTAGGCTGCTA+AGG 0.413276 3_1:-79511945 None:intergenic
ATGTTCCTGGTCTAGTGGTT+GGG 0.414455 3_1:+79506068 Msa0378670:CDS
ACTTTACACAAGCGAGTCAT+TGG 0.414627 3_1:+79510865 Msa0378670:CDS
AAACTTATTGGTTCACCTCC+TGG 0.414825 3_1:+79511105 Msa0378670:CDS
TCCATGGCTATTTCGGAAGT+TGG 0.416138 3_1:+79512082 Msa0378670:three_prime_UTR
ACCTGTCCCTCAGGGAAAGT+TGG 0.421323 3_1:+79507855 Msa0378670:intron
TTAAGAATGCCAGGTTTCTC+AGG 0.429731 3_1:+79506169 Msa0378670:CDS
GCAATACTATACAGCAATGC+TGG 0.430704 3_1:-79512147 None:intergenic
CATTACCTCTTCTGCGAGCT+TGG 0.431461 3_1:-79507762 None:intergenic
GAAGATTGTTAAAGAGAAAG+AGG 0.432645 3_1:+79510111 Msa0378670:CDS
TAACAATAAAACACCAACTT+TGG 0.433480 3_1:+79507718 Msa0378670:CDS
CAATTTCTACACGGCGGGCA+AGG 0.434847 3_1:+79506263 Msa0378670:CDS
AATGTTCCTGGTCTAGTGGT+TGG 0.435674 3_1:+79506067 Msa0378670:CDS
TCCTCGTGCAAAGCGTGTAT+TGG 0.436138 3_1:+79506552 Msa0378670:CDS
TTATAATAGAATCAAGAGTT+TGG 0.437499 3_1:+79511404 Msa0378670:CDS
AGCCATGATTCCCGAATATC+CGG 0.440884 3_1:-79506023 None:intergenic
GAAAAGATGAAGCTAGCAAT+TGG 0.446933 3_1:-79510961 None:intergenic
TGTGGCTGTCTTCCCACAAC+AGG 0.448929 3_1:-79507880 None:intergenic
GTCACCCTCTTTGATCTCTC+TGG 0.449102 3_1:-79511709 None:intergenic
ATTATAGGAATAAGTGGGAT+AGG 0.450568 3_1:+79511987 Msa0378670:three_prime_UTR
CTCGAGGAAGCTCGCCAACT+TGG 0.453993 3_1:+79506583 Msa0378670:CDS
AGGTCTTCTTCGAGAGGGTG+AGG 0.455712 3_1:+79507471 Msa0378670:CDS
AGCTAGCAATTGGACGGTTA+GGG 0.456523 3_1:-79510951 None:intergenic
AGGAACTAAAACAATACTTC+AGG 0.457240 3_1:+79511433 Msa0378670:CDS
AGCCATGTTTGAGCGTTTCA+CGG 0.458933 3_1:+79506306 Msa0378670:CDS
TATTAGTAGGATCAGCGCCC+AGG 0.460369 3_1:-79507519 None:intergenic
GGTTCACCTCCTGGATATGT+TGG 0.462266 3_1:+79511114 Msa0378670:CDS
TGGAACAGAGCAGATTCTAC+TGG 0.466157 3_1:+79506393 Msa0378670:CDS
GTTCTGGTACTTTAACTGGC+TGG 0.466695 3_1:-79509060 None:intergenic
ATGTCAACTTCAGTCACAAT+AGG 0.466713 3_1:-79510757 None:intergenic
GCACAAGCAAAGTCAACATA+AGG 0.467412 3_1:+79506090 Msa0378670:CDS
TAACAGAAAGATTTAGGGAC+AGG 0.469450 3_1:+79511589 Msa0378670:CDS
AGCATCATGTTGAATACATC+AGG 0.469700 3_1:-79511222 None:intergenic
TCCCATAGACTTTAAAACCT+TGG 0.470278 3_1:-79506446 None:intergenic
AGTTCGCCTCTTGCAAGAGC+TGG 0.472521 3_1:-79508615 None:intergenic
AGCCCGTGTTCTTGAAAACC+TGG 0.474778 3_1:+79507501 Msa0378670:CDS
AGAACTACGTGATAAAGAAA+TGG 0.474958 3_1:+79510654 Msa0378670:CDS
TAAATACCGTGGTGAGTTTG+AGG 0.476180 3_1:+79508464 Msa0378670:CDS
TGTTACTGCTACTGTTGGCT+CGG 0.477023 3_1:+79507688 Msa0378670:CDS
ATCAAATCAATGGCTTTGTC+GGG 0.478982 3_1:-79509898 None:intergenic
AGAGGGTGACTCCGTAATAG+TGG 0.479834 3_1:+79511722 Msa0378670:CDS
TTATAGGAATAAGTGGGATA+GGG 0.480320 3_1:+79511988 Msa0378670:three_prime_UTR
TTCAACATATCGTGTCCTCC+TGG 0.480428 3_1:+79510779 Msa0378670:CDS
CAAGAGGAGGCAAGGCGTCT+TGG 0.480892 3_1:+79506358 Msa0378670:CDS
CTTATAATGACGTCAAATGT+TGG 0.481358 3_1:+79511312 Msa0378670:CDS
TCTGCTGAGACTTTATCAAC+AGG 0.481392 3_1:-79510811 None:intergenic
TCTTGCAAGAGGCGAACTAC+AGG 0.482034 3_1:+79508620 Msa0378670:CDS
TCAAAGAGTACAACAGTGTA+AGG 0.482911 3_1:-79511180 None:intergenic
AAATAGCAGACATAATGCTC+AGG 0.485233 3_1:+79511523 Msa0378670:CDS
ACTCATGTCAAGACGAATCA+TGG 0.485591 3_1:-79511055 None:intergenic
CTTGCTCAGCGGATTGCAAA+TGG 0.488742 3_1:+79508000 Msa0378670:CDS
GTAGTAGGCAGCCAATGCTT+TGG 0.489027 3_1:-79511016 None:intergenic
GGAATCAACATCCACTATTA+CGG 0.489265 3_1:-79511733 None:intergenic
AGCTTCATCAATCAAATCAA+TGG 0.489376 3_1:-79509908 None:intergenic
GATGGCTCTTCTTAAAGGCC+TGG 0.492279 3_1:-79511646 None:intergenic
CAAAGTCAACATAAGGGATC+GGG 0.495246 3_1:+79506097 Msa0378670:CDS
CATTATATAGCAAGAGCCTC+TGG 0.496204 3_1:-79511807 None:intergenic
CTGCTAAGGGAAAACATGAC+TGG 0.497235 3_1:-79511931 None:intergenic
GTCTGAATTGGCCAAAGCAT+TGG 0.497656 3_1:+79511005 Msa0378670:CDS
TAAAGATGCACGAGTGGAAG+TGG 0.498088 3_1:+79506477 Msa0378670:CDS
AATCAAGATCGAATCCAATT+CGG 0.500880 3_1:-79511362 None:intergenic
ATAATATGATAGAGGAAGGA+AGG 0.502742 3_1:-79505257 None:intergenic
AAGAACTTGACAAGGAGGTC+AGG 0.505480 3_1:+79510089 Msa0378670:CDS
GTCGGGCTATCCGTCGAGCA+CGG 0.505534 3_1:+79510914 Msa0378670:CDS
GTTCCATACTCCTCCAAAGT+TGG 0.506275 3_1:-79507731 None:intergenic
GATCTGTATATGACATGCCT+TGG 0.506705 3_1:+79512044 Msa0378670:three_prime_UTR
TATAGGAATAAGTGGGATAG+GGG 0.511778 3_1:+79511989 Msa0378670:three_prime_UTR
TTATTGGAGAACCTGGTGTT+GGG 0.513026 3_1:+79507956 Msa0378670:CDS
TGTTCTTGAAATCCACAGTT+CGG 0.514426 3_1:-79511284 None:intergenic
ATCTGATCGCCTCCTCAAGA+TGG 0.514627 3_1:+79510837 Msa0378670:CDS
AGTGATAATGTTAGCTCAAG+AGG 0.516301 3_1:+79506342 Msa0378670:CDS
CATAGACTTTAAAACCTTGG+CGG 0.516915 3_1:-79506443 None:intergenic
GGTCTTATTGGTGAAGGCAC+TGG 0.517438 3_1:+79506415 Msa0378670:CDS
GGATCTAAGGGCGCAGATCT+CGG 0.519911 3_1:+79510675 Msa0378670:CDS
ACCTGTGTGCGAATATTAGT+AGG 0.519972 3_1:-79507532 None:intergenic
GAAGGTTATAATCCTAGCTA+TGG 0.520470 3_1:+79511621 Msa0378670:CDS
GTGGAGAAGATAATTGGAAG+AGG 0.520750 3_1:+79506496 Msa0378670:CDS
ATTGATTTGATTGATGAAGC+TGG 0.522141 3_1:+79509910 Msa0378670:CDS
CATATCGTGTCCTCCTGGAC+GGG 0.524485 3_1:+79510784 Msa0378670:CDS
GTTACTGCTACTGTTGGCTC+GGG 0.524509 3_1:+79507689 Msa0378670:CDS
AGCCGGATATTCGGGAATCA+TGG 0.524642 3_1:+79506021 Msa0378670:intron
CCACAACATTGGATGAATAC+AGG 0.528109 3_1:+79508999 Msa0378670:CDS
CAATAAAACACCAACTTTGG+AGG 0.528552 3_1:+79507721 Msa0378670:CDS
ATCTCGGCACTTGTAGAGAA+AGG 0.528902 3_1:+79510691 Msa0378670:CDS
AAAGGCCTGGCTCCATAGCT+AGG 0.530755 3_1:-79511633 None:intergenic
TCGCAACCAAGACTTTGAAA+AGG 0.532814 3_1:+79510141 Msa0378670:CDS
TCGGGCTATCCGTCGAGCAC+GGG 0.533907 3_1:+79510915 Msa0378670:CDS
AATTTCTACACGGCGGGCAA+GGG 0.534704 3_1:+79506264 Msa0378670:CDS
GCAAAGTCAACATAAGGGAT+CGG 0.534948 3_1:+79506096 Msa0378670:CDS
ACAAGTGGATTAAGAATGCC+AGG 0.535409 3_1:+79506160 Msa0378670:CDS
TATATGATATAATATGATAG+AGG 0.535447 3_1:-79505265 None:intergenic
ATGCTTCAGATCCTTGAAGA+TGG 0.536989 3_1:+79511240 Msa0378670:CDS
ATCAACAGGAATGCCCGTCC+AGG 0.537924 3_1:-79510797 None:intergenic
GGGAAAGTTGGATCCTGTTG+TGG 0.537999 3_1:+79507867 Msa0378670:intron
CTTATTGGAGAACCTGGTGT+TGG 0.538020 3_1:+79507955 Msa0378670:CDS
GCATACATACATCATAGAAA+AGG 0.538074 3_1:-79511836 None:intergenic
TCGACGGATAGCCCGACTAA+TGG 0.538900 3_1:-79510908 None:intergenic
AGACATGCAACCCTGTACAT+TGG 0.539114 3_1:-79512261 None:intergenic
GTAAAGTATCTTCCATCTTG+AGG 0.539384 3_1:-79510849 None:intergenic
AATGGCAATTTCTACACGGC+GGG 0.539827 3_1:+79506258 Msa0378670:CDS
GTATACTTATTCCATAAACT+AGG 0.542797 3_1:-79512308 None:intergenic
GACAATGTTACTGCTACTGT+TGG 0.543582 3_1:+79507683 Msa0378670:CDS
TTCTTCAGAGCCAAAGTAGT+AGG 0.543624 3_1:-79511031 None:intergenic
ACACAAGCGAGTCATTGGTC+AGG 0.544730 3_1:+79510870 Msa0378670:CDS
GGAAAGTTGGATCCTGTTGT+GGG 0.544780 3_1:+79507868 Msa0378670:CDS
GATATTCGGGAATCATGGCT+CGG 0.544931 3_1:+79506026 Msa0378670:exon
AAGCGAAAGGAATAAAATTG+TGG 0.545174 3_1:-79505230 None:intergenic
GACATGGGTCTGCTTGTAGC+CGG 0.545246 3_1:+79508438 Msa0378670:CDS
TGATAAAGAAATGGATCTAA+GGG 0.546297 3_1:+79510663 Msa0378670:CDS
GGAAGCAGTGTGATTGAGAA+AGG 0.546826 3_1:+79511333 Msa0378670:CDS
GACATGTTCATCTTCATCCA+TGG 0.547277 3_1:+79512066 Msa0378670:three_prime_UTR
TGGTGTGGGGAAGTCTGAAT+TGG 0.547498 3_1:+79510993 Msa0378670:CDS
TTTGACCAAGCTCGCAGAAG+AGG 0.548018 3_1:+79507757 Msa0378670:CDS
TGCTAAGGGAAAACATGACT+GGG 0.548207 3_1:-79511930 None:intergenic
TGGGTGACACGTTCAATTTG+TGG 0.548358 3_1:-79507898 None:intergenic
GATGAGCAAAGCAGAGAGTG+AGG 0.551014 3_1:+79510720 Msa0378670:CDS
GGAGAGGTTGAAGAAACTGA+TGG 0.552688 3_1:+79508485 Msa0378670:CDS
ATAATCCTAGCTATGGAGCC+AGG 0.554444 3_1:+79511628 Msa0378670:CDS
CTTCTAGGTCTTCTTCGAGA+GGG 0.556040 3_1:+79507466 Msa0378670:CDS
CTCCGTGAAACGCTCAAACA+TGG 0.556050 3_1:-79506308 None:intergenic
TGTATGGTTTCATCAACAGT+TGG 0.556173 3_1:-79509082 None:intergenic
GGTAATGTGATTGTTCTCAA+TGG 0.559015 3_1:+79511759 Msa0378670:CDS
ACATATCGTGTCCTCCTGGA+CGG 0.559052 3_1:+79510783 Msa0378670:CDS
ATATTCGGGAATCATGGCTC+GGG 0.559088 3_1:+79506027 Msa0378670:exon
GTATGACAACCACAAATTCA+GGG 0.559140 3_1:+79512210 Msa0378670:three_prime_UTR
TCAGTGTAACCAACATATCC+AGG 0.559254 3_1:-79511123 None:intergenic
AGCAGTAGAAGCCATTAGTC+GGG 0.561845 3_1:+79510897 Msa0378670:CDS
AAACGCTCAAACATGGCTCT+AGG 0.562302 3_1:-79506301 None:intergenic
GCTATCCGTCGAGCACGGGT+TGG 0.562819 3_1:+79510919 Msa0378670:CDS
TTAACAAATGCATACCAAGT+TGG 0.563326 3_1:-79506597 None:intergenic
TGATATAATATGATAGAGGA+AGG 0.565620 3_1:-79505261 None:intergenic
TTGATTTGCTAGGCTGCTAA+GGG 0.565979 3_1:-79511944 None:intergenic
TTTCTGGTCCAACTGGTGTG+GGG 0.566734 3_1:+79510980 Msa0378670:CDS
CTACTGGGTCTTATTGGTGA+AGG 0.566897 3_1:+79506409 Msa0378670:CDS
CACAAGCAAAGTCAACATAA+GGG 0.569649 3_1:+79506091 Msa0378670:CDS
AAGCAGTAGAAGCCATTAGT+CGG 0.571735 3_1:+79510896 Msa0378670:CDS
TTGGATACTATGCTGAAACC+TGG 0.572166 3_1:+79506211 Msa0378670:CDS
GCTTCTAGGTCTTCTTCGAG+AGG 0.573108 3_1:+79507465 Msa0378670:CDS
GTGCACACACTAATTGGAGC+AGG 0.573347 3_1:+79508552 Msa0378670:CDS
ATCCTCCAAAAGTCGCATGA+TGG 0.573693 3_1:-79511664 None:intergenic
CAATACTATACAGCAATGCT+GGG 0.574156 3_1:-79512146 None:intergenic
TCAATCCAACCCGTGCTCGA+CGG 0.575359 3_1:-79510924 None:intergenic
GTGGTTTCAGTTGCCAGAAG+AGG 0.575911 3_1:+79510063 Msa0378670:intron
ATTGCTGTCTTCCCAACACC+AGG 0.576240 3_1:-79507967 None:intergenic
GGAACAGAGCAGATTCTACT+GGG 0.576295 3_1:+79506394 Msa0378670:CDS
GAAGGAAGGAAAGAAGCGAA+AGG 0.576676 3_1:-79505243 None:intergenic
GATTAATGTTCCTGGTCTAG+TGG 0.577290 3_1:+79506063 Msa0378670:CDS
CTCACCACGGTATTTAGTAC+CGG 0.577721 3_1:-79508457 None:intergenic
TGGATACTATGCTGAAACCT+GGG 0.580597 3_1:+79506212 Msa0378670:CDS
GGTCTTCTTCGAGAGGGTGA+GGG 0.581676 3_1:+79507472 Msa0378670:CDS
GGAATCGTCTCTCCAAAGCT+GGG 0.583453 3_1:-79509039 None:intergenic
ATTGCTGTATAGTATTGCTA+TGG 0.587333 3_1:+79512152 Msa0378670:three_prime_UTR
CATGTTGAATACATCAGGAT+GGG 0.591274 3_1:-79511217 None:intergenic
TTTGCGTGAAAATCTAGCCC+AGG 0.591359 3_1:-79506229 None:intergenic
CCTGTATTCATCCAATGTTG+TGG 0.592061 3_1:-79508999 None:intergenic
TAATGACTCTTGAGTACCGC+TGG 0.592462 3_1:-79511784 None:intergenic
GAGAGTGAGGCAGCAGACGA+AGG 0.592704 3_1:+79510733 Msa0378670:CDS
TCAGACTTCCCCACACCAGT+TGG 0.593013 3_1:-79510988 None:intergenic
TCCAACTTCCGAAATAGCCA+TGG 0.593814 3_1:-79512083 None:intergenic
ACTCACAAAACTGGAGGTGA+AGG 0.595629 3_1:+79511500 Msa0378670:CDS
GGAAGACTAACGGACAGTAA+AGG 0.596129 3_1:+79511261 Msa0378670:CDS
CTAAAACCAGCTCTTGCAAG+AGG 0.596964 3_1:+79508609 Msa0378670:CDS
TCATGTTGAATACATCAGGA+TGG 0.597747 3_1:-79511218 None:intergenic
ATGTGTGCTCTGCGAACAAG+TGG 0.598939 3_1:+79506145 Msa0378670:CDS
CTAGGTTATAACCCTCGACA+TGG 0.599033 3_1:+79508422 Msa0378670:intron
GCATAGGTTATTCGCATGGT+GGG 0.603210 3_1:+79507650 Msa0378670:intron
TTAACATTATAGGAATAAGT+GGG 0.603681 3_1:+79511982 Msa0378670:three_prime_UTR
TGTTAGCTCAAGAGGAGGCA+AGG 0.606725 3_1:+79506350 Msa0378670:CDS
TCCAATACACGCTTTGCACG+AGG 0.610074 3_1:-79506553 None:intergenic
GCCCGTGTTCTTGAAAACCT+GGG 0.611740 3_1:+79507502 Msa0378670:CDS
TTGTGCCCAACCACTAGACC+AGG 0.614357 3_1:-79506073 None:intergenic
AGTCCGTCTTCAACATGCAC+AGG 0.614688 3_1:+79509939 Msa0378670:CDS
GAGGCTCTTGCTATATAATG+TGG 0.617034 3_1:+79511810 Msa0378670:exon
CAACCTTAAAGATGCACGAG+TGG 0.617077 3_1:+79506471 Msa0378670:CDS
AATCAAGAGTTTGGTGACTG+AGG 0.617951 3_1:+79511413 Msa0378670:CDS
ATACCTGTGCATGTTGAAGA+CGG 0.618584 3_1:-79509942 None:intergenic
TACAAGCAGACCCATGTCGA+GGG 0.618958 3_1:-79508433 None:intergenic
AGATGAAGCTAGCAATTGGA+CGG 0.619132 3_1:-79510957 None:intergenic
GTACGAAGTCCTGAGAAACC+TGG 0.621017 3_1:-79506178 None:intergenic
GGGAAGACAGCAATTGCTGA+AGG 0.622127 3_1:+79507976 Msa0378670:CDS
GAAACCATACAAATACTGAA+AGG 0.623251 3_1:+79509094 Msa0378670:CDS
GGATATGTTGGTTACACTGA+AGG 0.624514 3_1:+79511126 Msa0378670:CDS
CCTTGAAGATGGAAGACTAA+CGG 0.625200 3_1:+79511251 Msa0378670:CDS
AGGGACAGGGTGGTTGACGA+AGG 0.629060 3_1:+79511603 Msa0378670:CDS
AGGCACTGGTATCGCCGCCA+AGG 0.629421 3_1:+79506429 Msa0378670:CDS
AGGAGTAAACGGAATTTCAA+CGG 0.631678 3_1:-79506533 None:intergenic
CCAGGTTCTCCAATAAGACA+AGG 0.631883 3_1:-79507949 None:intergenic
CAGGCAACTCACAAAACTGG+AGG 0.631958 3_1:+79511494 Msa0378670:CDS
CGAAAGGAATAAAATTGTGG+TGG 0.633504 3_1:-79505227 None:intergenic
CTCGCCAGAGAGATCAAAGA+GGG 0.633919 3_1:+79511705 Msa0378670:CDS
AATAGCAGACATAATGCTCA+GGG 0.636079 3_1:+79511524 Msa0378670:CDS
AACAGAAAGATTTAGGGACA+GGG 0.637304 3_1:+79511590 Msa0378670:CDS
TGTATTGGAACTTTCACTCG+AGG 0.638433 3_1:+79506567 Msa0378670:CDS
ACATGCAACCCTGTACATTG+GGG 0.638905 3_1:-79512259 None:intergenic
GGCATAGGTTATTCGCATGG+TGG 0.639012 3_1:+79507649 Msa0378670:intron
CATCAGTATATCGAAGCTTG+TGG 0.642564 3_1:-79509141 None:intergenic
CTACAAGCAGACCCATGTCG+AGG 0.645704 3_1:-79508434 None:intergenic
ACCGTGGTGAGTTTGAGGAG+AGG 0.647205 3_1:+79508469 Msa0378670:CDS
ATGGGCATAGGTTATTCGCA+TGG 0.648542 3_1:+79507646 Msa0378670:intron
TTGCTGAAGGTCTTGCTCAG+CGG 0.650332 3_1:+79507989 Msa0378670:CDS
ATTGGAGCAGGAGCAGCCGA+AGG 0.651442 3_1:+79508564 Msa0378670:CDS
GATGAAGATGAACATGTCCA+AGG 0.652848 3_1:-79512061 None:intergenic
TATCAGCAAGCACCTCCTTG+AGG 0.653823 3_1:+79505308 Msa0378670:five_prime_UTR
AGAGGCAAAAGAACTTGACA+AGG 0.654303 3_1:+79510081 Msa0378670:CDS
GAGAACAATCACATTACCGT+CGG 0.654311 3_1:-79511754 None:intergenic
TACTCAAGAGTCATTACCAG+AGG 0.656366 3_1:+79511791 Msa0378670:CDS
ACATGAGTGAGTTTATGGAA+AGG 0.657196 3_1:+79511070 Msa0378670:CDS
ACCTCTCCTCAAACTCACCA+CGG 0.657923 3_1:-79508470 None:intergenic
GTGTATTGGAGCCACAACAT+TGG 0.658810 3_1:+79508988 Msa0378670:intron
AACAGGAATGCCCGTCCAGG+AGG 0.663322 3_1:-79510794 None:intergenic
AAGTATCTTCCATCTTGAGG+AGG 0.666939 3_1:-79510846 None:intergenic
GATAATGTTAGCTCAAGAGG+AGG 0.667530 3_1:+79506345 Msa0378670:CDS
GGCAAAAGAACTTGACAAGG+AGG 0.667719 3_1:+79510084 Msa0378670:CDS
TCCTACTAATATTCGCACAC+AGG 0.671963 3_1:+79507531 Msa0378670:CDS
GGACAGTAAAGGCCGAACTG+TGG 0.672843 3_1:+79511272 Msa0378670:CDS
TGATGTACCTGAAACAATCG+AGG 0.674849 3_1:+79508023 Msa0378670:CDS
TAGGTTATAACCCTCGACAT+GGG 0.677434 3_1:+79508423 Msa0378670:intron
GCTCGCCAGAGAGATCAAAG+AGG 0.680368 3_1:+79511704 Msa0378670:CDS
AGAAAGATTTAGGGACAGGG+TGG 0.680970 3_1:+79511593 Msa0378670:CDS
GGCACTTGTAGAGAAAGGCA+AGG 0.681351 3_1:+79510696 Msa0378670:CDS
ATTGTTCTCAATGGTACCAG+CGG 0.682456 3_1:+79511768 Msa0378670:CDS
AGCAGTGTGATTGAGAAAGG+AGG 0.683862 3_1:+79511336 Msa0378670:CDS
TATCAATGGCAATTTCTACA+CGG 0.687547 3_1:+79506254 Msa0378670:CDS
CATGCAACCCTGTACATTGG+GGG 0.701712 3_1:-79512258 None:intergenic
ATAGTGGATGTTGATTCCGA+CGG 0.707457 3_1:+79511738 Msa0378670:CDS
GATGTACCTGAAACAATCGA+GGG 0.717844 3_1:+79508024 Msa0378670:CDS
AGCAGACATAATGCTCAGGG+AGG 0.724565 3_1:+79511527 Msa0378670:CDS
CAATGGCAATTTCTACACGG+CGG 0.726789 3_1:+79506257 Msa0378670:CDS
TATGTTGGTTACACTGAAGG+TGG 0.729330 3_1:+79511129 Msa0378670:CDS
GTAGCCGGTACTAAATACCG+TGG 0.745190 3_1:+79508453 Msa0378670:CDS
GTGTAACCAACATATCCAGG+AGG 0.759460 3_1:-79511120 None:intergenic
TAGTAATAGATACCTCAAGG+AGG 0.774995 3_1:-79505320 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTTTTTATTTCTTATAAAA+AGG + chr3_1:79507254-79507273 Msa0378670:intron 10.0%
!! AATTAATATAAACATTAATG+TGG - chr3_1:79507588-79507607 None:intergenic 10.0%
!!! TAATTCTTATTAATTTGATA+TGG - chr3_1:79508830-79508849 None:intergenic 10.0%
!!! AGTTTTTTATTTTTTTAAAC+AGG + chr3_1:79509990-79510009 Msa0378670:intron 10.0%
!! TATATGATATAATATGATAG+AGG - chr3_1:79505268-79505287 None:intergenic 15.0%
!! GTTTAATCAATTATAAGATA+AGG - chr3_1:79505601-79505620 None:intergenic 15.0%
!! CCTAAATTAATTAAGATTTA+AGG - chr3_1:79505661-79505680 None:intergenic 15.0%
!! CCTTAAATCTTAATTAATTT+AGG + chr3_1:79505658-79505677 Msa0378670:intron 15.0%
!!! TTTTTGTTCTTATTTTTGAT+TGG + chr3_1:79506687-79506706 Msa0378670:intron 15.0%
!! ATAAATCTCACAATAAAATA+CGG - chr3_1:79507124-79507143 None:intergenic 15.0%
!!! TTATTTCTTATAAAAAGGAA+CGG + chr3_1:79507259-79507278 Msa0378670:intron 15.0%
!!! AGCATTTTATAAGAATATAT+TGG - chr3_1:79508389-79508408 None:intergenic 15.0%
!! CATAAGTATCAAATTAATAT+TGG + chr3_1:79508861-79508880 Msa0378670:intron 15.0%
!! TAATTTAAAAATTAAAGTGG+TGG + chr3_1:79508891-79508910 Msa0378670:intron 15.0%
!! ACTAAAGTCATATAAATATA+TGG + chr3_1:79509755-79509774 Msa0378670:intron 15.0%
!! ATATAAATATATGGATTTCT+GGG + chr3_1:79509764-79509783 Msa0378670:intron 15.0%
!!! CTTATCTGTTTTTTTTTCTT+TGG + chr3_1:79505393-79505412 Msa0378670:intron 20.0%
!! TTTAGATGAAAGAATGATTA+AGG + chr3_1:79505516-79505535 Msa0378670:intron 20.0%
!!! TTGATTAAACGAATGTTTTA+AGG + chr3_1:79505611-79505630 Msa0378670:intron 20.0%
!!! TGATTAAACGAATGTTTTAA+GGG + chr3_1:79505612-79505631 Msa0378670:intron 20.0%
!!! AAATTTATCTATTTTACGTG+AGG + chr3_1:79506801-79506820 Msa0378670:intron 20.0%
!!! TATGTTTTGATTTCATTAAG+AGG + chr3_1:79506839-79506858 Msa0378670:intron 20.0%
!! TAAATCTCACAATAAAATAC+GGG - chr3_1:79507123-79507142 None:intergenic 20.0%
!!! TGATTATTACATGTTATTTG+TGG + chr3_1:79507178-79507197 Msa0378670:intron 20.0%
!! TTGTATTAAAAAAATTGAGC+CGG + chr3_1:79507304-79507323 Msa0378670:intron 20.0%
!!! TCATATTCAATTGTAAGTTT+TGG + chr3_1:79507375-79507394 Msa0378670:intron 20.0%
!! TGGTAAAAATAGATAAATGA+AGG - chr3_1:79507568-79507587 None:intergenic 20.0%
!!! AATAAGACAAGGATTATTTT+TGG - chr3_1:79507941-79507960 None:intergenic 20.0%
!! AAAAATAATCCTTGTCTTAT+TGG + chr3_1:79507940-79507959 Msa0378670:CDS 20.0%
!! TATTAGAAAAATGATGTTGT+CGG + chr3_1:79508251-79508270 Msa0378670:intron 20.0%
!!! CAAATAACAATTTAAGCTTT+TGG - chr3_1:79508335-79508354 None:intergenic 20.0%
!!! AAGCTTAAATTGTTATTTGA+AGG + chr3_1:79508336-79508355 Msa0378670:intron 20.0%
!!! TTTCCTCAAAGTATTTAAAA+TGG + chr3_1:79508649-79508668 Msa0378670:intron 20.0%
!!! AATCCATTTTAAATACTTTG+AGG - chr3_1:79508655-79508674 None:intergenic 20.0%
!! TTAAATATTATGCAGTGTAT+TGG + chr3_1:79508974-79508993 Msa0378670:intron 20.0%
!!! AAATACAGATACTCTAAAAT+TGG + chr3_1:79509390-79509409 Msa0378670:intron 20.0%
!! TTGAATATATTGTATTAACG+AGG + chr3_1:79509623-79509642 Msa0378670:intron 20.0%
!! TGTTTCATGTTAATGTATTT+AGG + chr3_1:79509686-79509705 Msa0378670:intron 20.0%
!! CATATAAATATATGGATTTC+TGG + chr3_1:79509763-79509782 Msa0378670:intron 20.0%
!! TATAAATATATGGATTTCTG+GGG + chr3_1:79509765-79509784 Msa0378670:intron 20.0%
!! ATAAAAAACTGCTAGTTAAA+GGG - chr3_1:79509980-79509999 None:intergenic 20.0%
!! AATAAAAAACTGCTAGTTAA+AGG - chr3_1:79509981-79510000 None:intergenic 20.0%
!! ATTGAACTATAAAACTTTAC+AGG - chr3_1:79510191-79510210 None:intergenic 20.0%
!! TTATAATAGAATCAAGAGTT+TGG + chr3_1:79511404-79511423 Msa0378670:CDS 20.0%
!!! TCTTTTAATTTATCACTGAT+AGG + chr3_1:79511907-79511926 Msa0378670:three_prime_UTR 20.0%
!! TTAACATTATAGGAATAAGT+GGG + chr3_1:79511982-79512001 Msa0378670:three_prime_UTR 20.0%
! TGATATAATATGATAGAGGA+AGG - chr3_1:79505264-79505283 None:intergenic 25.0%
! ATATAGTAATAGATACCTCA+AGG - chr3_1:79505326-79505345 None:intergenic 25.0%
!!! ATCTGTTTTTTTTTCTTTGG+TGG + chr3_1:79505396-79505415 Msa0378670:intron 25.0%
!!! GATTAAACGAATGTTTTAAG+GGG + chr3_1:79505613-79505632 Msa0378670:intron 25.0%
!! CTTTGTTTGTTAAACTATGT+AGG + chr3_1:79505760-79505779 Msa0378670:intron 25.0%
! TATGTATTCTATTGCTTCAA+GGG + chr3_1:79505961-79505980 Msa0378670:intron 25.0%
!!! GTTTTATTAATAAATGCAGC+CGG + chr3_1:79506004-79506023 Msa0378670:intron 25.0%
! AATTGGGTAGTAATGTATAA+TGG - chr3_1:79506630-79506649 None:intergenic 25.0%
! TTACTACCCAATTTATTAGT+TGG + chr3_1:79506637-79506656 Msa0378670:intron 25.0%
! CTTTCTCCAACTAATAAATT+GGG - chr3_1:79506646-79506665 None:intergenic 25.0%
! TAATTCAAGCAACAAATTAC+AGG - chr3_1:79506748-79506767 None:intergenic 25.0%
! AAAGGAATTCTAGCAATTAA+TGG - chr3_1:79507096-79507115 None:intergenic 25.0%
! CAATAAAATACGGGTATAAA+AGG - chr3_1:79507114-79507133 None:intergenic 25.0%
! TCTTACACCATAAAAATTTC+AGG + chr3_1:79507415-79507434 Msa0378670:intron 25.0%
! CTTACACCATAAAAATTTCA+GGG + chr3_1:79507416-79507435 Msa0378670:intron 25.0%
! CATTAATCTGATCATTTCTT+TGG + chr3_1:79507622-79507641 Msa0378670:intron 25.0%
! TAACAATAAAACACCAACTT+TGG + chr3_1:79507718-79507737 Msa0378670:CDS 25.0%
! ATATTCTATATTTGAGTAGC+TGG + chr3_1:79508145-79508164 Msa0378670:intron 25.0%
!!! TATGATTGGTTTTTAGTTGT+TGG + chr3_1:79508728-79508747 Msa0378670:intron 25.0%
!! ACAAGTACATCAATTTTCAA+TGG - chr3_1:79509309-79509328 None:intergenic 25.0%
! TGAAAATTGATGTACTTGTT+TGG + chr3_1:79509310-79509329 Msa0378670:intron 25.0%
! TATATTGTATTAACGAGGAA+TGG + chr3_1:79509628-79509647 Msa0378670:intron 25.0%
! CACAATTAGCTAAATAATAG+AGG - chr3_1:79510036-79510055 None:intergenic 25.0%
! TAGTTCAATTTATATACGCT+CGG + chr3_1:79510202-79510221 Msa0378670:intron 25.0%
!! TAATTTTTATACACTCTCAG+TGG - chr3_1:79510355-79510374 None:intergenic 25.0%
! AATGTTTGATGCTAAAACAT+AGG - chr3_1:79510381-79510400 None:intergenic 25.0%
!! TTTTAGCATCAAACATTTTC+AGG + chr3_1:79510384-79510403 Msa0378670:intron 25.0%
! AACATTATCTAATTGGAGAA+AGG - chr3_1:79510424-79510443 None:intergenic 25.0%
! AGACAACAACATTATCTAAT+TGG - chr3_1:79510431-79510450 None:intergenic 25.0%
! ATGAAAAATAATACTTGTGC+TGG + chr3_1:79510451-79510470 Msa0378670:intron 25.0%
!! ATTGCCTGAAATTTTATAGT+TGG + chr3_1:79510490-79510509 Msa0378670:intron 25.0%
!! TTAGTCAATAATTTGTGACT+TGG + chr3_1:79510604-79510623 Msa0378670:intron 25.0%
! TGATAAAGAAATGGATCTAA+GGG + chr3_1:79510663-79510682 Msa0378670:CDS 25.0%
! TTCAAGTAACAGAAAGATTT+AGG + chr3_1:79511583-79511602 Msa0378670:CDS 25.0%
! TCAAGTAACAGAAAGATTTA+GGG + chr3_1:79511584-79511603 Msa0378670:CDS 25.0%
! GTTAACATTATAGGAATAAG+TGG + chr3_1:79511981-79512000 Msa0378670:three_prime_UTR 25.0%
! GTATACTTATTCCATAAACT+AGG - chr3_1:79512311-79512330 None:intergenic 25.0%
TAAACAGTATGATGCTCTAT+TGG - chr3_1:79505130-79505149 None:intergenic 30.0%
AATAAAATTGTGGTGGCAAA+TGG - chr3_1:79505223-79505242 None:intergenic 30.0%
AAGCGAAAGGAATAAAATTG+TGG - chr3_1:79505233-79505252 None:intergenic 30.0%
ATAATATGATAGAGGAAGGA+AGG - chr3_1:79505260-79505279 None:intergenic 30.0%
TAAACTTCTATATAGCTGCT+TGG + chr3_1:79505701-79505720 Msa0378670:intron 30.0%
AAACTTCTATATAGCTGCTT+GGG + chr3_1:79505702-79505721 Msa0378670:intron 30.0%
GTAAACGAATAATTAGCAGA+TGG - chr3_1:79505838-79505857 None:intergenic 30.0%
CTGCTAATTATTCGTTTACA+TGG + chr3_1:79505839-79505858 Msa0378670:intron 30.0%
ATTTCCTGAAATCATGAACA+TGG + chr3_1:79505888-79505907 Msa0378670:intron 30.0%
GTATGTATTCTATTGCTTCA+AGG + chr3_1:79505960-79505979 Msa0378670:intron 30.0%
GCTTCAAGGGTAATAATTAT+TGG + chr3_1:79505974-79505993 Msa0378670:intron 30.0%
ACTTCGTACTATCAATCATT+TGG + chr3_1:79506192-79506211 Msa0378670:CDS 30.0%
TATCAATGGCAATTTCTACA+CGG + chr3_1:79506254-79506273 Msa0378670:CDS 30.0%
TTAACAAATGCATACCAAGT+TGG - chr3_1:79506600-79506619 None:intergenic 30.0%
GCTTTCTCCAACTAATAAAT+TGG - chr3_1:79506647-79506666 None:intergenic 30.0%
!! AGCATTTTGATCTTTAACAG+TGG + chr3_1:79506664-79506683 Msa0378670:intron 30.0%
AATTACAGGACAAAAAACTG+CGG - chr3_1:79506734-79506753 None:intergenic 30.0%
! TGTTGCTTGAATTAAGATAG+AGG + chr3_1:79506754-79506773 Msa0378670:intron 30.0%
!!! GAATTAAGATAGAGGTGTTT+TGG + chr3_1:79506762-79506781 Msa0378670:intron 30.0%
!!! GTTTTGATTTCATTAAGAGG+AGG + chr3_1:79506842-79506861 Msa0378670:intron 30.0%
GGGATAAACAAACTATCATA+TGG - chr3_1:79506953-79506972 None:intergenic 30.0%
CCAAATAGATAGTACTCTTT+CGG + chr3_1:79507028-79507047 Msa0378670:intron 30.0%
CAAATAGATAGTACTCTTTC+GGG + chr3_1:79507029-79507048 Msa0378670:intron 30.0%
CTGTGTTTCTTATCGTTATT+AGG - chr3_1:79507065-79507084 None:intergenic 30.0%
!! ATTCTAGCAATTAATGGACT+TGG - chr3_1:79507090-79507109 None:intergenic 30.0%
ATTAAATGCATCCACTATGT+GGG - chr3_1:79507159-79507178 None:intergenic 30.0%
!! GACAAAGGAAAAGCATTTAA+AGG - chr3_1:79507223-79507242 None:intergenic 30.0%
! TTTCCTTTGTCTTGATGATT+TGG + chr3_1:79507232-79507251 Msa0378670:intron 30.0%
AAACCAAATCATCAAGACAA+AGG - chr3_1:79507238-79507257 None:intergenic 30.0%
TATTAAAAAAATTGAGCCGG+AGG + chr3_1:79507307-79507326 Msa0378670:intron 30.0%
! ATTGTGCCCTGAAATTTTTA+TGG - chr3_1:79507425-79507444 None:intergenic 30.0%
ATTTCAGGGCACAATTATAT+TGG + chr3_1:79507430-79507449 Msa0378670:intron 30.0%
! ATCTGATCATTTCTTTGGAA+TGG + chr3_1:79507627-79507646 Msa0378670:intron 30.0%
!! TCTGATCATTTCTTTGGAAT+GGG + chr3_1:79507628-79507647 Msa0378670:intron 30.0%
AGAATAACAGATCATCTGAA+TGG - chr3_1:79508105-79508124 None:intergenic 30.0%
! TGGAAGAGTTGATTATATCA+TGG - chr3_1:79508315-79508334 None:intergenic 30.0%
CATATAAACTTTATGACCAG+AGG - chr3_1:79508801-79508820 None:intergenic 30.0%
GAAACCATACAAATACTGAA+AGG + chr3_1:79509094-79509113 Msa0378670:CDS 30.0%
AAGTCCTTTCAGTATTTGTA+TGG - chr3_1:79509101-79509120 None:intergenic 30.0%
AACTTTCATACCAGTATATC+AGG + chr3_1:79509185-79509204 Msa0378670:CDS 30.0%
TAATGTCAAGATATTCACAG+AGG - chr3_1:79509354-79509373 None:intergenic 30.0%
!! TTAGTACTGGCATTTACATT+CGG + chr3_1:79509445-79509464 Msa0378670:intron 30.0%
TCAAGTTATCGTAGTTTAGA+TGG - chr3_1:79509506-79509525 None:intergenic 30.0%
AAACTATGTAGCAATATCTC+TGG + chr3_1:79509552-79509571 Msa0378670:intron 30.0%
CTTTAGTACAGTATGCATAT+GGG - chr3_1:79509742-79509761 None:intergenic 30.0%
ACTTTAGTACAGTATGCATA+TGG - chr3_1:79509743-79509762 None:intergenic 30.0%
GCTCATTTCAAAATTATTCC+TGG + chr3_1:79509836-79509855 Msa0378670:intron 30.0%
!! AATCAAATCAATGGCTTTGT+CGG - chr3_1:79509902-79509921 None:intergenic 30.0%
AGCTTCATCAATCAAATCAA+TGG - chr3_1:79509911-79509930 None:intergenic 30.0%
!! ATTGATTTGATTGATGAAGC+TGG + chr3_1:79509910-79509929 Msa0378670:CDS 30.0%
TAGCTAATTGTGCTATAATG+TGG + chr3_1:79510044-79510063 Msa0378670:intron 30.0%
! AAGTTACCTTTTCAAAGTCT+TGG - chr3_1:79510150-79510169 None:intergenic 30.0%
TAGGCCAACTATAAAATTTC+AGG - chr3_1:79510497-79510516 None:intergenic 30.0%
TGACACATGAATTTCTGAAT+AGG + chr3_1:79510627-79510646 Msa0378670:intron 30.0%
AGAACTACGTGATAAAGAAA+TGG + chr3_1:79510654-79510673 Msa0378670:CDS 30.0%
GTGATAAAGAAATGGATCTA+AGG + chr3_1:79510662-79510681 Msa0378670:CDS 30.0%
CTTATAATGACGTCAAATGT+TGG + chr3_1:79511312-79511331 Msa0378670:CDS 30.0%
AATCAAGATCGAATCCAATT+CGG - chr3_1:79511365-79511384 None:intergenic 30.0%
AGGAACTAAAACAATACTTC+AGG + chr3_1:79511433-79511452 Msa0378670:CDS 30.0%
TCCAACCTATTTAAAAACTC+TGG - chr3_1:79511459-79511478 None:intergenic 30.0%
! TGGATGAAATGATTGTTTTC+AGG + chr3_1:79511475-79511494 Msa0378670:CDS 30.0%
GCATACATACATCATAGAAA+AGG - chr3_1:79511839-79511858 None:intergenic 30.0%
TCGACAAGTAAAACATACTA+TGG - chr3_1:79511883-79511902 None:intergenic 30.0%
!!! TTTTCTGAACTTGATTTGCT+AGG - chr3_1:79511957-79511976 None:intergenic 30.0%
AGCAAATCAAGTTCAGAAAA+AGG + chr3_1:79511957-79511976 Msa0378670:three_prime_UTR 30.0%
GCAAATCAAGTTCAGAAAAA+GGG + chr3_1:79511958-79511977 Msa0378670:three_prime_UTR 30.0%
CAAATCAAGTTCAGAAAAAG+GGG + chr3_1:79511959-79511978 Msa0378670:three_prime_UTR 30.0%
GAAAAAGGGGTTAACATTAT+AGG + chr3_1:79511972-79511991 Msa0378670:three_prime_UTR 30.0%
ATTATAGGAATAAGTGGGAT+AGG + chr3_1:79511987-79512006 Msa0378670:three_prime_UTR 30.0%
TTATAGGAATAAGTGGGATA+GGG + chr3_1:79511988-79512007 Msa0378670:three_prime_UTR 30.0%
ATTGCTGTATAGTATTGCTA+TGG + chr3_1:79512152-79512171 Msa0378670:three_prime_UTR 30.0%
CGAAAGGAATAAAATTGTGG+TGG - chr3_1:79505230-79505249 None:intergenic 35.0%
TAGTAATAGATACCTCAAGG+AGG - chr3_1:79505323-79505342 None:intergenic 35.0%
AATAAATGCAGCCGGATATT+CGG + chr3_1:79506012-79506031 Msa0378670:intron 35.0%
CACAAGCAAAGTCAACATAA+GGG + chr3_1:79506091-79506110 Msa0378670:CDS 35.0%
!!! TTTTCACGCAAAGGTATCAA+TGG + chr3_1:79506240-79506259 Msa0378670:CDS 35.0%
! AGTGATAATGTTAGCTCAAG+AGG + chr3_1:79506342-79506361 Msa0378670:CDS 35.0%
!! CATAGACTTTAAAACCTTGG+CGG - chr3_1:79506446-79506465 None:intergenic 35.0%
!!! GCCAAGGTTTTAAAGTCTAT+GGG + chr3_1:79506445-79506464 Msa0378670:CDS 35.0%
!! TCCCATAGACTTTAAAACCT+TGG - chr3_1:79506449-79506468 None:intergenic 35.0%
AAGATAATTGGAAGAGGTAG+TGG + chr3_1:79506502-79506521 Msa0378670:CDS 35.0%
AGGAGTAAACGGAATTTCAA+CGG - chr3_1:79506536-79506555 None:intergenic 35.0%
TGGGTAGTAATGTATAATGG+AGG - chr3_1:79506627-79506646 None:intergenic 35.0%
ATTACAGGACAAAAAACTGC+GGG - chr3_1:79506733-79506752 None:intergenic 35.0%
!!! TGTTTTGGTTATGCAATGCT+TGG + chr3_1:79506777-79506796 Msa0378670:intron 35.0%
! ATCTATTTTACGTGAGGAGA+TGG + chr3_1:79506807-79506826 Msa0378670:intron 35.0%
! TCTATTTTACGTGAGGAGAT+GGG + chr3_1:79506808-79506827 Msa0378670:intron 35.0%
TATTCTCTACGCTTTCACTT+AGG - chr3_1:79506872-79506891 None:intergenic 35.0%
! TCACTTGGATAGAAGTACAA+GGG - chr3_1:79506973-79506992 None:intergenic 35.0%
! ATCACTTGGATAGAAGTACA+AGG - chr3_1:79506974-79506993 None:intergenic 35.0%
!! CCGAAAGAGTACTATCTATT+TGG - chr3_1:79507031-79507050 None:intergenic 35.0%
!!! GTACTCTTTCGGGTTTTTTT+AGG + chr3_1:79507039-79507058 Msa0378670:intron 35.0%
CATTAAATGCATCCACTATG+TGG - chr3_1:79507160-79507179 None:intergenic 35.0%
GAAAAAAAACAGATAGCCTC+CGG - chr3_1:79507326-79507345 None:intergenic 35.0%
!!! GGCTATCTGTTTTTTTTCAG+TGG + chr3_1:79507328-79507347 Msa0378670:intron 35.0%
!!! ATCTGTTTTTTTTCAGTGGC+TGG + chr3_1:79507332-79507351 Msa0378670:intron 35.0%
CAATAAAACACCAACTTTGG+AGG + chr3_1:79507721-79507740 Msa0378670:CDS 35.0%
CATCGTTCATGAAGAAAACT+AGG - chr3_1:79507794-79507813 None:intergenic 35.0%
!! CTAGTTTTCTTCATGAACGA+TGG + chr3_1:79507792-79507811 Msa0378670:intron 35.0%
!!! AAGGATTATTTTTGGTGCGA+CGG - chr3_1:79507933-79507952 None:intergenic 35.0%
!!! TTTTTTCCCTCGATTGTTTC+AGG - chr3_1:79508033-79508052 None:intergenic 35.0%
TGAAACAATCGAGGGAAAAA+AGG + chr3_1:79508032-79508051 Msa0378670:CDS 35.0%
TCCTTTATTAAGAGCCCTTT+AGG + chr3_1:79508172-79508191 Msa0378670:intron 35.0%
! ATGCTTTGTTCACATGAACT+AGG + chr3_1:79508404-79508423 Msa0378670:intron 35.0%
AACCAATCATATCATTCTCC+CGG - chr3_1:79508719-79508738 None:intergenic 35.0%
!!! ACCACTTGTGAACTTTTTCA+TGG + chr3_1:79508762-79508781 Msa0378670:intron 35.0%
!!! CCACTTGTGAACTTTTTCAT+GGG + chr3_1:79508763-79508782 Msa0378670:intron 35.0%
!!! GTGAACTTTTTCATGGGAAA+AGG + chr3_1:79508769-79508788 Msa0378670:intron 35.0%
TGTATGGTTTCATCAACAGT+TGG - chr3_1:79509085-79509104 None:intergenic 35.0%
TCATGACAAACCTGATATAC+TGG - chr3_1:79509198-79509217 None:intergenic 35.0%
! ATCTTGCATGTCATTTATGC+TGG + chr3_1:79509241-79509260 Msa0378670:intron 35.0%
!! TAGTACTGGCATTTACATTC+GGG + chr3_1:79509446-79509465 Msa0378670:intron 35.0%
ATGCATGTGTCAAGAGAAAT+TGG - chr3_1:79509654-79509673 None:intergenic 35.0%
AGCAAACATTATTATACGCC+AGG - chr3_1:79509857-79509876 None:intergenic 35.0%
!! ATCAAATCAATGGCTTTGTC+GGG - chr3_1:79509901-79509920 None:intergenic 35.0%
AAACATTGCACGTTTGAATC+AGG - chr3_1:79510585-79510604 None:intergenic 35.0%
ACATGAATTTCTGAATAGGC+TGG + chr3_1:79510631-79510650 Msa0378670:intron 35.0%
ATGTCAACTTCAGTCACAAT+AGG - chr3_1:79510760-79510779 None:intergenic 35.0%
! GTAAAGTATCTTCCATCTTG+AGG - chr3_1:79510852-79510871 None:intergenic 35.0%
GAAAAGATGAAGCTAGCAAT+TGG - chr3_1:79510964-79510983 None:intergenic 35.0%
!! ATTGCTAGCTTCATCTTTTC+TGG + chr3_1:79510964-79510983 Msa0378670:CDS 35.0%
TCTTGACATGAGTGAGTTTA+TGG + chr3_1:79511065-79511084 Msa0378670:CDS 35.0%
ACATGAGTGAGTTTATGGAA+AGG + chr3_1:79511070-79511089 Msa0378670:CDS 35.0%
! TCAAAGAGTACAACAGTGTA+AGG - chr3_1:79511183-79511202 None:intergenic 35.0%
CATGTTGAATACATCAGGAT+GGG - chr3_1:79511220-79511239 None:intergenic 35.0%
TCATGTTGAATACATCAGGA+TGG - chr3_1:79511221-79511240 None:intergenic 35.0%
AGCATCATGTTGAATACATC+AGG - chr3_1:79511225-79511244 None:intergenic 35.0%
TGTTCTTGAAATCCACAGTT+CGG - chr3_1:79511287-79511306 None:intergenic 35.0%
! TCAGGCCAGAGTTTTTAAAT+AGG + chr3_1:79511451-79511470 Msa0378670:CDS 35.0%
! GCCAGAGTTTTTAAATAGGT+TGG + chr3_1:79511455-79511474 Msa0378670:CDS 35.0%
AAATAGCAGACATAATGCTC+AGG + chr3_1:79511523-79511542 Msa0378670:CDS 35.0%
AATAGCAGACATAATGCTCA+GGG + chr3_1:79511524-79511543 Msa0378670:CDS 35.0%
TAACAGAAAGATTTAGGGAC+AGG + chr3_1:79511589-79511608 Msa0378670:CDS 35.0%
AACAGAAAGATTTAGGGACA+GGG + chr3_1:79511590-79511609 Msa0378670:CDS 35.0%
GAAGGTTATAATCCTAGCTA+TGG + chr3_1:79511621-79511640 Msa0378670:CDS 35.0%
GGAATCAACATCCACTATTA+CGG - chr3_1:79511736-79511755 None:intergenic 35.0%
GGTAATGTGATTGTTCTCAA+TGG + chr3_1:79511759-79511778 Msa0378670:CDS 35.0%
TATAGGAATAAGTGGGATAG+GGG + chr3_1:79511989-79512008 Msa0378670:three_prime_UTR 35.0%
ATCTTCATCCATGGCTATTT+CGG + chr3_1:79512075-79512094 Msa0378670:three_prime_UTR 35.0%
CAATACTATACAGCAATGCT+GGG - chr3_1:79512149-79512168 None:intergenic 35.0%
TGTATGACAACCACAAATTC+AGG + chr3_1:79512209-79512228 Msa0378670:three_prime_UTR 35.0%
GTATGACAACCACAAATTCA+GGG + chr3_1:79512210-79512229 Msa0378670:three_prime_UTR 35.0%
CTCAAATTTCCCTGAATTTG+TGG - chr3_1:79512222-79512241 None:intergenic 35.0%
CAGACTGTATTCCTAGTTTA+TGG + chr3_1:79512297-79512316 Msa0378670:three_prime_UTR 35.0%
TGTAGGTACTATGCTGTCTT+TGG + chr3_1:79505777-79505796 Msa0378670:intron 40.0%
AGCACCATGTTCATGATTTC+AGG - chr3_1:79505895-79505914 None:intergenic 40.0%
TGAAATCATGAACATGGTGC+TGG + chr3_1:79505894-79505913 Msa0378670:intron 40.0%
ATAAATGCAGCCGGATATTC+GGG + chr3_1:79506013-79506032 Msa0378670:intron 40.0%
GATTAATGTTCCTGGTCTAG+TGG + chr3_1:79506063-79506082 Msa0378670:CDS 40.0%
GCACAAGCAAAGTCAACATA+AGG + chr3_1:79506090-79506109 Msa0378670:CDS 40.0%
GCAAAGTCAACATAAGGGAT+CGG + chr3_1:79506096-79506115 Msa0378670:CDS 40.0%
CAAAGTCAACATAAGGGATC+GGG + chr3_1:79506097-79506116 Msa0378670:CDS 40.0%
!! ACAAGTGGATTAAGAATGCC+AGG + chr3_1:79506160-79506179 Msa0378670:CDS 40.0%
TTAAGAATGCCAGGTTTCTC+AGG + chr3_1:79506169-79506188 Msa0378670:CDS 40.0%
TTGGATACTATGCTGAAACC+TGG + chr3_1:79506211-79506230 Msa0378670:CDS 40.0%
TGGATACTATGCTGAAACCT+GGG + chr3_1:79506212-79506231 Msa0378670:CDS 40.0%
GATAATGTTAGCTCAAGAGG+AGG + chr3_1:79506345-79506364 Msa0378670:CDS 40.0%
! CGTCTTGGTCACAATTTTGT+TGG + chr3_1:79506373-79506392 Msa0378670:CDS 40.0%
! CAGATTCTACTGGGTCTTAT+TGG + chr3_1:79506403-79506422 Msa0378670:CDS 40.0%
!!! CGCCAAGGTTTTAAAGTCTA+TGG + chr3_1:79506444-79506463 Msa0378670:CDS 40.0%
GTGGAAGTGGAGAAGATAAT+TGG + chr3_1:79506490-79506509 Msa0378670:CDS 40.0%
GTGGAGAAGATAATTGGAAG+AGG + chr3_1:79506496-79506515 Msa0378670:CDS 40.0%
TGTATTGGAACTTTCACTCG+AGG + chr3_1:79506567-79506586 Msa0378670:CDS 40.0%
! CTATTTTACGTGAGGAGATG+GGG + chr3_1:79506809-79506828 Msa0378670:intron 40.0%
GAGTACTATCTATTTGGTCG+TGG - chr3_1:79507025-79507044 None:intergenic 40.0%
CTAACTAGAAACCCACATAG+TGG + chr3_1:79507145-79507164 Msa0378670:intron 40.0%
TCCTACTAATATTCGCACAC+AGG + chr3_1:79507531-79507550 Msa0378670:CDS 40.0%
ACCTGTGTGCGAATATTAGT+AGG - chr3_1:79507535-79507554 None:intergenic 40.0%
!! CATTTCTTTGGAATGGGCAT+AGG + chr3_1:79507634-79507653 Msa0378670:intron 40.0%
GACAATGTTACTGCTACTGT+TGG + chr3_1:79507683-79507702 Msa0378670:CDS 40.0%
! GTTTTCTTCATGAACGATGG+TGG + chr3_1:79507795-79507814 Msa0378670:intron 40.0%
! GAACGTGTCACCCAAATTTT+AGG + chr3_1:79507907-79507926 Msa0378670:CDS 40.0%
TTATTGGAGAACCTGGTGTT+GGG + chr3_1:79507956-79507975 Msa0378670:CDS 40.0%
TGATGTACCTGAAACAATCG+AGG + chr3_1:79508023-79508042 Msa0378670:CDS 40.0%
GATGTACCTGAAACAATCGA+GGG + chr3_1:79508024-79508043 Msa0378670:CDS 40.0%
GCCTAAAGGGCTCTTAATAA+AGG - chr3_1:79508176-79508195 None:intergenic 40.0%
TTATTAAGAGCCCTTTAGGC+TGG + chr3_1:79508176-79508195 Msa0378670:intron 40.0%
TAATGCACTTCCAGCCTAAA+GGG - chr3_1:79508189-79508208 None:intergenic 40.0%
TTAATGCACTTCCAGCCTAA+AGG - chr3_1:79508190-79508209 None:intergenic 40.0%
TAGGTTATAACCCTCGACAT+GGG + chr3_1:79508423-79508442 Msa0378670:intron 40.0%
TAAATACCGTGGTGAGTTTG+AGG + chr3_1:79508464-79508483 Msa0378670:CDS 40.0%
GATGAAGTGCACACACTAAT+TGG + chr3_1:79508546-79508565 Msa0378670:CDS 40.0%
GATATAGGACAATGGCATCA+AGG - chr3_1:79508697-79508716 None:intergenic 40.0%
TGATGCCATTGTCCTATATC+CGG + chr3_1:79508697-79508716 Msa0378670:intron 40.0%
CATATCATTCTCCCGGATAT+AGG - chr3_1:79508712-79508731 None:intergenic 40.0%
ATCCGGGAGAATGATATGAT+TGG + chr3_1:79508714-79508733 Msa0378670:intron 40.0%
CCCATGAAAAAGTTCACAAG+TGG - chr3_1:79508766-79508785 None:intergenic 40.0%
CCTGTATTCATCCAATGTTG+TGG - chr3_1:79509002-79509021 None:intergenic 40.0%
CCACAACATTGGATGAATAC+AGG + chr3_1:79508999-79509018 Msa0378670:CDS 40.0%
!! GTTGGTTCTGGTACTTTAAC+TGG - chr3_1:79509067-79509086 None:intergenic 40.0%
! GTTTCATCAACAGTTGGTTC+TGG - chr3_1:79509079-79509098 None:intergenic 40.0%
CATCAGTATATCGAAGCTTG+TGG - chr3_1:79509144-79509163 None:intergenic 40.0%
GTGTATTGCAGTCTTAGTAC+TGG + chr3_1:79509432-79509451 Msa0378670:intron 40.0%
!! AGTACTGGCATTTACATTCG+GGG + chr3_1:79509447-79509466 Msa0378670:intron 40.0%
GATGGTTAAACTGCTAGATG+AGG - chr3_1:79509488-79509507 None:intergenic 40.0%
ATACCTGTGCATGTTGAAGA+CGG - chr3_1:79509945-79509964 None:intergenic 40.0%
! TCAAGTTCTTTTGCCTCTTC+TGG - chr3_1:79510079-79510098 None:intergenic 40.0%
AGAGGCAAAAGAACTTGACA+AGG + chr3_1:79510081-79510100 Msa0378670:CDS 40.0%
! TCGCAACCAAGACTTTGAAA+AGG + chr3_1:79510141-79510160 Msa0378670:CDS 40.0%
! TGACTTGCCATGCTCATTAA+TGG + chr3_1:79510291-79510310 Msa0378670:intron 40.0%
GTTGACACCATTAATGAGCA+TGG - chr3_1:79510301-79510320 None:intergenic 40.0%
CTAGATGCAGAGATCATTCT+AGG - chr3_1:79510516-79510535 None:intergenic 40.0%
TGAATCAGGAACAGACAACT+GGG - chr3_1:79510571-79510590 None:intergenic 40.0%
TTGAATCAGGAACAGACAAC+TGG - chr3_1:79510572-79510591 None:intergenic 40.0%
TCTGCTGAGACTTTATCAAC+AGG - chr3_1:79510814-79510833 None:intergenic 40.0%
AAGTATCTTCCATCTTGAGG+AGG - chr3_1:79510849-79510868 None:intergenic 40.0%
ACTTTACACAAGCGAGTCAT+TGG + chr3_1:79510865-79510884 Msa0378670:CDS 40.0%
AAGCAGTAGAAGCCATTAGT+CGG + chr3_1:79510896-79510915 Msa0378670:CDS 40.0%
AGATGAAGCTAGCAATTGGA+CGG - chr3_1:79510960-79510979 None:intergenic 40.0%
!! TTCATCTTTTCTGGTCCAAC+TGG + chr3_1:79510973-79510992 Msa0378670:CDS 40.0%
TTCTTCAGAGCCAAAGTAGT+AGG - chr3_1:79511034-79511053 None:intergenic 40.0%
ACTCATGTCAAGACGAATCA+TGG - chr3_1:79511058-79511077 None:intergenic 40.0%
CACACTGTCTCCAAACTTAT+TGG + chr3_1:79511093-79511112 Msa0378670:CDS 40.0%
AGGAGGTGAACCAATAAGTT+TGG - chr3_1:79511106-79511125 None:intergenic 40.0%
!! AAACTTATTGGTTCACCTCC+TGG + chr3_1:79511105-79511124 Msa0378670:CDS 40.0%
TCAGTGTAACCAACATATCC+AGG - chr3_1:79511126-79511145 None:intergenic 40.0%
! GGATATGTTGGTTACACTGA+AGG + chr3_1:79511126-79511145 Msa0378670:CDS 40.0%
! TATGTTGGTTACACTGAAGG+TGG + chr3_1:79511129-79511148 Msa0378670:CDS 40.0%
ATGCTTCAGATCCTTGAAGA+TGG + chr3_1:79511240-79511259 Msa0378670:CDS 40.0%
CCTTGAAGATGGAAGACTAA+CGG + chr3_1:79511251-79511270 Msa0378670:CDS 40.0%
! AATCAAGAGTTTGGTGACTG+AGG + chr3_1:79511413-79511432 Msa0378670:CDS 40.0%
TTTCAGGCAACTCACAAAAC+TGG + chr3_1:79511491-79511510 Msa0378670:CDS 40.0%
!! ATAGTGGATGTTGATTCCGA+CGG + chr3_1:79511738-79511757 Msa0378670:CDS 40.0%
GAGAACAATCACATTACCGT+CGG - chr3_1:79511757-79511776 None:intergenic 40.0%
ATTGTTCTCAATGGTACCAG+CGG + chr3_1:79511768-79511787 Msa0378670:CDS 40.0%
TACTCAAGAGTCATTACCAG+AGG + chr3_1:79511791-79511810 Msa0378670:CDS 40.0%
CATTATATAGCAAGAGCCTC+TGG - chr3_1:79511810-79511829 None:intergenic 40.0%
! GAGGCTCTTGCTATATAATG+TGG + chr3_1:79511810-79511829 Msa0378670:exon 40.0%
TGCTAAGGGAAAACATGACT+GGG - chr3_1:79511933-79511952 None:intergenic 40.0%
!! TTGATTTGCTAGGCTGCTAA+GGG - chr3_1:79511947-79511966 None:intergenic 40.0%
GGATAGGGGAAAACCAAAAA+GGG + chr3_1:79512003-79512022 Msa0378670:three_prime_UTR 40.0%
GATCTGTATATGACATGCCT+TGG + chr3_1:79512044-79512063 Msa0378670:three_prime_UTR 40.0%
GATGAAGATGAACATGTCCA+AGG - chr3_1:79512064-79512083 None:intergenic 40.0%
GACATGTTCATCTTCATCCA+TGG + chr3_1:79512066-79512085 Msa0378670:three_prime_UTR 40.0%
GCAATACTATACAGCAATGC+TGG - chr3_1:79512150-79512169 None:intergenic 40.0%
GAAGGAAGGAAAGAAGCGAA+AGG - chr3_1:79505246-79505265 None:intergenic 45.0%
!! TGAACATGGTGCTGGTTATG+AGG + chr3_1:79505902-79505921 Msa0378670:intron 45.0%
AGCCATGATTCCCGAATATC+CGG - chr3_1:79506026-79506045 None:intergenic 45.0%
GATATTCGGGAATCATGGCT+CGG + chr3_1:79506026-79506045 Msa0378670:exon 45.0%
ATATTCGGGAATCATGGCTC+GGG + chr3_1:79506027-79506046 Msa0378670:exon 45.0%
GCTCAGTCGATTAATGTTCC+TGG + chr3_1:79506055-79506074 Msa0378670:CDS 45.0%
AATGTTCCTGGTCTAGTGGT+TGG + chr3_1:79506067-79506086 Msa0378670:CDS 45.0%
ATGTTCCTGGTCTAGTGGTT+GGG + chr3_1:79506068-79506087 Msa0378670:CDS 45.0%
TTTGCGTGAAAATCTAGCCC+AGG - chr3_1:79506232-79506251 None:intergenic 45.0%
!! TGGGCTAGATTTTCACGCAA+AGG + chr3_1:79506231-79506250 Msa0378670:CDS 45.0%
CAATGGCAATTTCTACACGG+CGG + chr3_1:79506257-79506276 Msa0378670:CDS 45.0%
AATGGCAATTTCTACACGGC+GGG + chr3_1:79506258-79506277 Msa0378670:CDS 45.0%
AAACGCTCAAACATGGCTCT+AGG - chr3_1:79506304-79506323 None:intergenic 45.0%
AGCCATGTTTGAGCGTTTCA+CGG + chr3_1:79506306-79506325 Msa0378670:CDS 45.0%
TGGAACAGAGCAGATTCTAC+TGG + chr3_1:79506393-79506412 Msa0378670:CDS 45.0%
GGAACAGAGCAGATTCTACT+GGG + chr3_1:79506394-79506413 Msa0378670:CDS 45.0%
!! CTACTGGGTCTTATTGGTGA+AGG + chr3_1:79506409-79506428 Msa0378670:CDS 45.0%
CAACCTTAAAGATGCACGAG+TGG + chr3_1:79506471-79506490 Msa0378670:CDS 45.0%
CTTCCACTCGTGCATCTTTA+AGG - chr3_1:79506477-79506496 None:intergenic 45.0%
TAAAGATGCACGAGTGGAAG+TGG + chr3_1:79506477-79506496 Msa0378670:CDS 45.0%
ACACCATGTATTACGGGGTT+TGG - chr3_1:79507001-79507020 None:intergenic 45.0%
TCGTGGCACACCATGTATTA+CGG - chr3_1:79507008-79507027 None:intergenic 45.0%
!! TTCAGTGGCTGGTTTGTCTT+AGG + chr3_1:79507343-79507362 Msa0378670:intron 45.0%
!! TCAGTGGCTGGTTTGTCTTA+GGG + chr3_1:79507344-79507363 Msa0378670:intron 45.0%
GGATCAGAACACTTGCTTCT+AGG + chr3_1:79507451-79507470 Msa0378670:CDS 45.0%
CTTCTAGGTCTTCTTCGAGA+GGG + chr3_1:79507466-79507485 Msa0378670:CDS 45.0%
ATGGGCATAGGTTATTCGCA+TGG + chr3_1:79507646-79507665 Msa0378670:intron 45.0%
GCATAGGTTATTCGCATGGT+GGG + chr3_1:79507650-79507669 Msa0378670:intron 45.0%
! TGTTACTGCTACTGTTGGCT+CGG + chr3_1:79507688-79507707 Msa0378670:CDS 45.0%
! ACACCAACTTTGGAGGAGTA+TGG + chr3_1:79507728-79507747 Msa0378670:CDS 45.0%
GTTCCATACTCCTCCAAAGT+TGG - chr3_1:79507734-79507753 None:intergenic 45.0%
TTCTGCGAGCTTGGTCAAAT+TGG - chr3_1:79507756-79507775 None:intergenic 45.0%
!! GAACGATGGTGGATGATACT+AGG + chr3_1:79507806-79507825 Msa0378670:intron 45.0%
GGAAAGTTGGATCCTGTTGT+GGG + chr3_1:79507868-79507887 Msa0378670:CDS 45.0%
TGGGTGACACGTTCAATTTG+TGG - chr3_1:79507901-79507920 None:intergenic 45.0%
CCAGGTTCTCCAATAAGACA+AGG - chr3_1:79507952-79507971 None:intergenic 45.0%
! CCTTGTCTTATTGGAGAACC+TGG + chr3_1:79507949-79507968 Msa0378670:CDS 45.0%
CTTATTGGAGAACCTGGTGT+TGG + chr3_1:79507955-79507974 Msa0378670:CDS 45.0%
GGATCAATGTCCTCACAAGT+TGG + chr3_1:79508272-79508291 Msa0378670:intron 45.0%
! ATGTCCTCACAAGTTGGCAA+AGG + chr3_1:79508278-79508297 Msa0378670:intron 45.0%
CTAGGTTATAACCCTCGACA+TGG + chr3_1:79508422-79508441 Msa0378670:intron 45.0%
CTCACCACGGTATTTAGTAC+CGG - chr3_1:79508460-79508479 None:intergenic 45.0%
GGAGAGGTTGAAGAAACTGA+TGG + chr3_1:79508485-79508504 Msa0378670:CDS 45.0%
AGCAGCATCAATTGCACCTT+CGG - chr3_1:79508583-79508602 None:intergenic 45.0%
CTAAAACCAGCTCTTGCAAG+AGG + chr3_1:79508609-79508628 Msa0378670:CDS 45.0%
GATGCCATTGTCCTATATCC+GGG + chr3_1:79508698-79508717 Msa0378670:intron 45.0%
TTCTCCCGGATATAGGACAA+TGG - chr3_1:79508705-79508724 None:intergenic 45.0%
AAAGTGGTGGCATTTCCTAC+TGG + chr3_1:79508904-79508923 Msa0378670:intron 45.0%
GTGTATTGGAGCCACAACAT+TGG + chr3_1:79508988-79509007 Msa0378670:intron 45.0%
CATCGAAAAAGACCCAGCTT+TGG + chr3_1:79509027-79509046 Msa0378670:CDS 45.0%
GTTCTGGTACTTTAACTGGC+TGG - chr3_1:79509063-79509082 None:intergenic 45.0%
CTGCAATACACACACAACAC+TGG - chr3_1:79509423-79509442 None:intergenic 45.0%
TGGCATTTACATTCGGGGTA+TGG + chr3_1:79509452-79509471 Msa0378670:intron 45.0%
GGCAAAAATCGATCACTGCA+GGG - chr3_1:79509880-79509899 None:intergenic 45.0%
GGCAAAAGAACTTGACAAGG+AGG + chr3_1:79510084-79510103 Msa0378670:CDS 45.0%
AAGAACTTGACAAGGAGGTC+AGG + chr3_1:79510089-79510108 Msa0378670:CDS 45.0%
GAATCAGGAACAGACAACTG+GGG - chr3_1:79510570-79510589 None:intergenic 45.0%
ATCTCGGCACTTGTAGAGAA+AGG + chr3_1:79510691-79510710 Msa0378670:CDS 45.0%
TTCAACATATCGTGTCCTCC+TGG + chr3_1:79510779-79510798 Msa0378670:CDS 45.0%
AGCAGTAGAAGCCATTAGTC+GGG + chr3_1:79510897-79510916 Msa0378670:CDS 45.0%
AGCTAGCAATTGGACGGTTA+GGG - chr3_1:79510954-79510973 None:intergenic 45.0%
AAGCTAGCAATTGGACGGTT+AGG - chr3_1:79510955-79510974 None:intergenic 45.0%
!! TTTTCTGGTCCAACTGGTGT+GGG + chr3_1:79510979-79510998 Msa0378670:CDS 45.0%
GTCTGAATTGGCCAAAGCAT+TGG + chr3_1:79511005-79511024 Msa0378670:CDS 45.0%
GTGTAACCAACATATCCAGG+AGG - chr3_1:79511123-79511142 None:intergenic 45.0%
!! CCGTTAGTCTTCCATCTTCA+AGG - chr3_1:79511254-79511273 None:intergenic 45.0%
! GGAAGACTAACGGACAGTAA+AGG + chr3_1:79511261-79511280 Msa0378670:CDS 45.0%
GGAAGCAGTGTGATTGAGAA+AGG + chr3_1:79511333-79511352 Msa0378670:CDS 45.0%
AGCAGTGTGATTGAGAAAGG+AGG + chr3_1:79511336-79511355 Msa0378670:CDS 45.0%
ACTCACAAAACTGGAGGTGA+AGG + chr3_1:79511500-79511519 Msa0378670:CDS 45.0%
AGAAAGATTTAGGGACAGGG+TGG + chr3_1:79511593-79511612 Msa0378670:CDS 45.0%
ATAATCCTAGCTATGGAGCC+AGG + chr3_1:79511628-79511647 Msa0378670:CDS 45.0%
CGCATGATGGCTCTTCTTAA+AGG - chr3_1:79511654-79511673 None:intergenic 45.0%
! AAGAGCCATCATGCGACTTT+TGG + chr3_1:79511659-79511678 Msa0378670:CDS 45.0%
ATCCTCCAAAAGTCGCATGA+TGG - chr3_1:79511667-79511686 None:intergenic 45.0%
! TAATGACTCTTGAGTACCGC+TGG - chr3_1:79511787-79511806 None:intergenic 45.0%
CTGCTAAGGGAAAACATGAC+TGG - chr3_1:79511934-79511953 None:intergenic 45.0%
!! CTTGATTTGCTAGGCTGCTA+AGG - chr3_1:79511948-79511967 None:intergenic 45.0%
GGGATAGGGGAAAACCAAAA+AGG + chr3_1:79512002-79512021 Msa0378670:three_prime_UTR 45.0%
! GGGAAAACCAAAAAGGGTGT+GGG + chr3_1:79512009-79512028 Msa0378670:three_prime_UTR 45.0%
! CATCATTCCCACACCCTTTT+TGG - chr3_1:79512019-79512038 None:intergenic 45.0%
! TCCATGGCTATTTCGGAAGT+TGG + chr3_1:79512082-79512101 Msa0378670:three_prime_UTR 45.0%
TCCAACTTCCGAAATAGCCA+TGG - chr3_1:79512086-79512105 None:intergenic 45.0%
AATGTTGTCCCCCAATGTAC+AGG + chr3_1:79512250-79512269 Msa0378670:three_prime_UTR 45.0%
ATGTTGTCCCCCAATGTACA+GGG + chr3_1:79512251-79512270 Msa0378670:three_prime_UTR 45.0%
ACATGCAACCCTGTACATTG+GGG - chr3_1:79512262-79512281 None:intergenic 45.0%
GACATGCAACCCTGTACATT+GGG - chr3_1:79512263-79512282 None:intergenic 45.0%
AGACATGCAACCCTGTACAT+TGG - chr3_1:79512264-79512283 None:intergenic 45.0%
TGTACAGGGTTGCATGTCTT+AGG + chr3_1:79512265-79512284 Msa0378670:three_prime_UTR 45.0%
!!! TTTTAATTTAAAAATTAAAG+TGG + chr3_1:79508888-79508907 Msa0378670:intron 5.0%
!! CAAGGAGGTGCTTGCTGATA+AGG - chr3_1:79505308-79505327 None:intergenic 50.0%
TATCAGCAAGCACCTCCTTG+AGG + chr3_1:79505308-79505327 Msa0378670:five_prime_UTR 50.0%
AGCCGGATATTCGGGAATCA+TGG + chr3_1:79506021-79506040 Msa0378670:intron 50.0%
ATGTGTGCTCTGCGAACAAG+TGG + chr3_1:79506145-79506164 Msa0378670:CDS 50.0%
GTACGAAGTCCTGAGAAACC+TGG - chr3_1:79506181-79506200 None:intergenic 50.0%
AATTTCTACACGGCGGGCAA+GGG + chr3_1:79506264-79506283 Msa0378670:CDS 50.0%
CTCCGTGAAACGCTCAAACA+TGG - chr3_1:79506311-79506330 None:intergenic 50.0%
TGTTAGCTCAAGAGGAGGCA+AGG + chr3_1:79506350-79506369 Msa0378670:CDS 50.0%
!! GGTCTTATTGGTGAAGGCAC+TGG + chr3_1:79506415-79506434 Msa0378670:CDS 50.0%
CGCTTTGCACGAGGAGTAAA+CGG - chr3_1:79506547-79506566 None:intergenic 50.0%
TCCTCGTGCAAAGCGTGTAT+TGG + chr3_1:79506552-79506571 Msa0378670:CDS 50.0%
TCCAATACACGCTTTGCACG+AGG - chr3_1:79506556-79506575 None:intergenic 50.0%
GCTCCAAACCCCGTAATACA+TGG + chr3_1:79506995-79507014 Msa0378670:intron 50.0%
GTGGCACACCATGTATTACG+GGG - chr3_1:79507006-79507025 None:intergenic 50.0%
CGTGGCACACCATGTATTAC+GGG - chr3_1:79507007-79507026 None:intergenic 50.0%
GCTTCTAGGTCTTCTTCGAG+AGG + chr3_1:79507465-79507484 Msa0378670:CDS 50.0%
AGCCCGTGTTCTTGAAAACC+TGG + chr3_1:79507501-79507520 Msa0378670:CDS 50.0%
GCCCGTGTTCTTGAAAACCT+GGG + chr3_1:79507502-79507521 Msa0378670:CDS 50.0%
!! GCCCAGGTTTTCAAGAACAC+GGG - chr3_1:79507506-79507525 None:intergenic 50.0%
!! CGCCCAGGTTTTCAAGAACA+CGG - chr3_1:79507507-79507526 None:intergenic 50.0%
TATTAGTAGGATCAGCGCCC+AGG - chr3_1:79507522-79507541 None:intergenic 50.0%
GGCATAGGTTATTCGCATGG+TGG + chr3_1:79507649-79507668 Msa0378670:intron 50.0%
!! GTTACTGCTACTGTTGGCTC+GGG + chr3_1:79507689-79507708 Msa0378670:CDS 50.0%
TTTGACCAAGCTCGCAGAAG+AGG + chr3_1:79507757-79507776 Msa0378670:CDS 50.0%
CATTACCTCTTCTGCGAGCT+TGG - chr3_1:79507765-79507784 None:intergenic 50.0%
! TTGTTTCTCACCTGTCCCTC+AGG + chr3_1:79507846-79507865 Msa0378670:intron 50.0%
TGTTTCTCACCTGTCCCTCA+GGG + chr3_1:79507847-79507866 Msa0378670:intron 50.0%
CAGGATCCAACTTTCCCTGA+GGG - chr3_1:79507864-79507883 None:intergenic 50.0%
ACAGGATCCAACTTTCCCTG+AGG - chr3_1:79507865-79507884 None:intergenic 50.0%
GGGAAAGTTGGATCCTGTTG+TGG + chr3_1:79507867-79507886 Msa0378670:intron 50.0%
GGTGCGACGGCCTAAAATTT+GGG - chr3_1:79507920-79507939 None:intergenic 50.0%
TGGTGCGACGGCCTAAAATT+TGG - chr3_1:79507921-79507940 None:intergenic 50.0%
ATTGCTGTCTTCCCAACACC+AGG - chr3_1:79507970-79507989 None:intergenic 50.0%
GGGAAGACAGCAATTGCTGA+AGG + chr3_1:79507976-79507995 Msa0378670:CDS 50.0%
TTGCTGAAGGTCTTGCTCAG+CGG + chr3_1:79507989-79508008 Msa0378670:CDS 50.0%
!! CTTGCTCAGCGGATTGCAAA+TGG + chr3_1:79508000-79508019 Msa0378670:CDS 50.0%
! TCCTCACAAGTTGGCAAAGG+AGG + chr3_1:79508281-79508300 Msa0378670:intron 50.0%
TACAAGCAGACCCATGTCGA+GGG - chr3_1:79508436-79508455 None:intergenic 50.0%
GTAGCCGGTACTAAATACCG+TGG + chr3_1:79508453-79508472 Msa0378670:CDS 50.0%
ACCTCTCCTCAAACTCACCA+CGG - chr3_1:79508473-79508492 None:intergenic 50.0%
GTGCACACACTAATTGGAGC+AGG + chr3_1:79508552-79508571 Msa0378670:CDS 50.0%
TCTTGCAAGAGGCGAACTAC+AGG + chr3_1:79508620-79508639 Msa0378670:CDS 50.0%
! TGGGAAAAGGTTCTGACCTC+TGG + chr3_1:79508782-79508801 Msa0378670:intron 50.0%
CAGCAGAGTGAACAACCAGT+AGG - chr3_1:79508922-79508941 None:intergenic 50.0%
GGAATCGTCTCTCCAAAGCT+GGG - chr3_1:79509042-79509061 None:intergenic 50.0%
TGGAATCGTCTCTCCAAAGC+TGG - chr3_1:79509043-79509062 None:intergenic 50.0%
GGGCAAAAATCGATCACTGC+AGG - chr3_1:79509881-79509900 None:intergenic 50.0%
AGTCCGTCTTCAACATGCAC+AGG + chr3_1:79509939-79509958 Msa0378670:CDS 50.0%
GTGGTTTCAGTTGCCAGAAG+AGG + chr3_1:79510063-79510082 Msa0378670:intron 50.0%
GGCACTTGTAGAGAAAGGCA+AGG + chr3_1:79510696-79510715 Msa0378670:CDS 50.0%
GATGAGCAAAGCAGAGAGTG+AGG + chr3_1:79510720-79510739 Msa0378670:CDS 50.0%
ACATATCGTGTCCTCCTGGA+CGG + chr3_1:79510783-79510802 Msa0378670:CDS 50.0%
ATCTGATCGCCTCCTCAAGA+TGG + chr3_1:79510837-79510856 Msa0378670:CDS 50.0%
ACACAAGCGAGTCATTGGTC+AGG + chr3_1:79510870-79510889 Msa0378670:CDS 50.0%
!! CTTTTCTGGTCCAACTGGTG+TGG + chr3_1:79510978-79510997 Msa0378670:CDS 50.0%
! TTTCTGGTCCAACTGGTGTG+GGG + chr3_1:79510980-79510999 Msa0378670:CDS 50.0%
TGGTGTGGGGAAGTCTGAAT+TGG + chr3_1:79510993-79511012 Msa0378670:CDS 50.0%
GTAGTAGGCAGCCAATGCTT+TGG - chr3_1:79511019-79511038 None:intergenic 50.0%
!! GCATTGGCTGCCTACTACTT+TGG + chr3_1:79511021-79511040 Msa0378670:CDS 50.0%
GGTTCACCTCCTGGATATGT+TGG + chr3_1:79511114-79511133 Msa0378670:CDS 50.0%
CAGGCAACTCACAAAACTGG+AGG + chr3_1:79511494-79511513 Msa0378670:CDS 50.0%
AGCAGACATAATGCTCAGGG+AGG + chr3_1:79511527-79511546 Msa0378670:CDS 50.0%
GATGGCTCTTCTTAAAGGCC+TGG - chr3_1:79511649-79511668 None:intergenic 50.0%
! AGCCATCATGCGACTTTTGG+AGG + chr3_1:79511662-79511681 Msa0378670:CDS 50.0%
!! GCGACTTTTGGAGGATAGCA+TGG + chr3_1:79511671-79511690 Msa0378670:CDS 50.0%
CTCGCCAGAGAGATCAAAGA+GGG + chr3_1:79511705-79511724 Msa0378670:CDS 50.0%
GTCACCCTCTTTGATCTCTC+TGG - chr3_1:79511712-79511731 None:intergenic 50.0%
AGAGGGTGACTCCGTAATAG+TGG + chr3_1:79511722-79511741 Msa0378670:CDS 50.0%
GGGGAAAACCAAAAAGGGTG+TGG + chr3_1:79512008-79512027 Msa0378670:three_prime_UTR 50.0%
CATGCAACCCTGTACATTGG+GGG - chr3_1:79512261-79512280 None:intergenic 50.0%
!! GGGAATCATGGCTCGGGTTT+TGG + chr3_1:79506033-79506052 Msa0378670:exon 55.0%
TTGTGCCCAACCACTAGACC+AGG - chr3_1:79506076-79506095 None:intergenic 55.0%
CAATTTCTACACGGCGGGCA+AGG + chr3_1:79506263-79506282 Msa0378670:CDS 55.0%
! CGGGGTTTGGAGCAATCACT+TGG - chr3_1:79506988-79507007 None:intergenic 55.0%
AGGTCTTCTTCGAGAGGGTG+AGG + chr3_1:79507471-79507490 Msa0378670:CDS 55.0%
GGTCTTCTTCGAGAGGGTGA+GGG + chr3_1:79507472-79507491 Msa0378670:CDS 55.0%
ACCTGTCCCTCAGGGAAAGT+TGG + chr3_1:79507855-79507874 Msa0378670:intron 55.0%
TCCAACTTTCCCTGAGGGAC+AGG - chr3_1:79507859-79507878 None:intergenic 55.0%
TGTGGCTGTCTTCCCACAAC+AGG - chr3_1:79507883-79507902 None:intergenic 55.0%
GCCTCCTTTGCCAACTTGTG+AGG - chr3_1:79508285-79508304 None:intergenic 55.0%
CTACAAGCAGACCCATGTCG+AGG - chr3_1:79508437-79508456 None:intergenic 55.0%
GACATGGGTCTGCTTGTAGC+CGG + chr3_1:79508438-79508457 Msa0378670:CDS 55.0%
ACCGTGGTGAGTTTGAGGAG+AGG + chr3_1:79508469-79508488 Msa0378670:CDS 55.0%
AGTTCGCCTCTTGCAAGAGC+TGG - chr3_1:79508618-79508637 None:intergenic 55.0%
! GGATCTAAGGGCGCAGATCT+CGG + chr3_1:79510675-79510694 Msa0378670:CDS 55.0%
CATATCGTGTCCTCCTGGAC+GGG + chr3_1:79510784-79510803 Msa0378670:CDS 55.0%
ATCAACAGGAATGCCCGTCC+AGG - chr3_1:79510800-79510819 None:intergenic 55.0%
TCGACGGATAGCCCGACTAA+TGG - chr3_1:79510911-79510930 None:intergenic 55.0%
TCAATCCAACCCGTGCTCGA+CGG - chr3_1:79510927-79510946 None:intergenic 55.0%
TCAGACTTCCCCACACCAGT+TGG - chr3_1:79510991-79511010 None:intergenic 55.0%
GGACAGTAAAGGCCGAACTG+TGG + chr3_1:79511272-79511291 Msa0378670:CDS 55.0%
GAGAAAGGAGGTCGCCGAAT+TGG + chr3_1:79511348-79511367 Msa0378670:CDS 55.0%
AAAGGCCTGGCTCCATAGCT+AGG - chr3_1:79511636-79511655 None:intergenic 55.0%
GCTCGCCAGAGAGATCAAAG+AGG + chr3_1:79511704-79511723 Msa0378670:CDS 55.0%
! CAAGAGGAGGCAAGGCGTCT+TGG + chr3_1:79506358-79506377 Msa0378670:CDS 60.0%
CTCGAGGAAGCTCGCCAACT+TGG + chr3_1:79506583-79506602 Msa0378670:CDS 60.0%
ATTGGAGCAGGAGCAGCCGA+AGG + chr3_1:79508564-79508583 Msa0378670:CDS 60.0%
GAGAGTGAGGCAGCAGACGA+AGG + chr3_1:79510733-79510752 Msa0378670:CDS 60.0%
AACAGGAATGCCCGTCCAGG+AGG - chr3_1:79510797-79510816 None:intergenic 60.0%
AGGGACAGGGTGGTTGACGA+AGG + chr3_1:79511603-79511622 Msa0378670:CDS 60.0%
!! AGGCACTGGTATCGCCGCCA+AGG + chr3_1:79506429-79506448 Msa0378670:CDS 65.0%
GTCGGGCTATCCGTCGAGCA+CGG + chr3_1:79510914-79510933 Msa0378670:CDS 65.0%
TCGGGCTATCCGTCGAGCAC+GGG + chr3_1:79510915-79510934 Msa0378670:CDS 65.0%
GCTATCCGTCGAGCACGGGT+TGG + chr3_1:79510919-79510938 Msa0378670:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 79505119 79512346 79505119 ID=Msa0378670;Name=Msa0378670
chr3_1 mRNA 79505119 79512346 79505119 ID=Msa0378670-mRNA-1;Parent=Msa0378670;Name=Msa0378670-mRNA-1;_AED=0.05;_eAED=0.05;_QI=228|1|1|1|0.88|0.8|10|519|922
chr3_1 exon 79505119 79505329 79505119 ID=Msa0378670-mRNA-1:exon:19548;Parent=Msa0378670-mRNA-1
chr3_1 exon 79506023 79506604 79506023 ID=Msa0378670-mRNA-1:exon:19549;Parent=Msa0378670-mRNA-1
chr3_1 exon 79507437 79507552 79507437 ID=Msa0378670-mRNA-1:exon:19550;Parent=Msa0378670-mRNA-1
chr3_1 exon 79507656 79507778 79507656 ID=Msa0378670-mRNA-1:exon:19551;Parent=Msa0378670-mRNA-1
chr3_1 exon 79507868 79508053 79507868 ID=Msa0378670-mRNA-1:exon:19552;Parent=Msa0378670-mRNA-1
chr3_1 exon 79508426 79508641 79508426 ID=Msa0378670-mRNA-1:exon:19553;Parent=Msa0378670-mRNA-1
chr3_1 exon 79508989 79509206 79508989 ID=Msa0378670-mRNA-1:exon:19554;Parent=Msa0378670-mRNA-1
chr3_1 exon 79509885 79509960 79509885 ID=Msa0378670-mRNA-1:exon:19555;Parent=Msa0378670-mRNA-1
chr3_1 exon 79510073 79510162 79510073 ID=Msa0378670-mRNA-1:exon:19556;Parent=Msa0378670-mRNA-1
chr3_1 exon 79510649 79512346 79510649 ID=Msa0378670-mRNA-1:exon:19557;Parent=Msa0378670-mRNA-1
chr3_1 five_prime_UTR 79505119 79505329 79505119 ID=Msa0378670-mRNA-1:five_prime_utr;Parent=Msa0378670-mRNA-1
chr3_1 five_prime_UTR 79506023 79506039 79506023 ID=Msa0378670-mRNA-1:five_prime_utr;Parent=Msa0378670-mRNA-1
chr3_1 CDS 79506040 79506604 79506040 ID=Msa0378670-mRNA-1:cds;Parent=Msa0378670-mRNA-1
chr3_1 CDS 79507437 79507552 79507437 ID=Msa0378670-mRNA-1:cds;Parent=Msa0378670-mRNA-1
chr3_1 CDS 79507656 79507778 79507656 ID=Msa0378670-mRNA-1:cds;Parent=Msa0378670-mRNA-1
chr3_1 CDS 79507868 79508053 79507868 ID=Msa0378670-mRNA-1:cds;Parent=Msa0378670-mRNA-1
chr3_1 CDS 79508426 79508641 79508426 ID=Msa0378670-mRNA-1:cds;Parent=Msa0378670-mRNA-1
chr3_1 CDS 79508989 79509206 79508989 ID=Msa0378670-mRNA-1:cds;Parent=Msa0378670-mRNA-1
chr3_1 CDS 79509885 79509960 79509885 ID=Msa0378670-mRNA-1:cds;Parent=Msa0378670-mRNA-1
chr3_1 CDS 79510073 79510162 79510073 ID=Msa0378670-mRNA-1:cds;Parent=Msa0378670-mRNA-1
chr3_1 CDS 79510649 79511827 79510649 ID=Msa0378670-mRNA-1:cds;Parent=Msa0378670-mRNA-1
chr3_1 three_prime_UTR 79511828 79512346 79511828 ID=Msa0378670-mRNA-1:three_prime_utr;Parent=Msa0378670-mRNA-1
Gene Sequence

>Msa0378670

ATGGCTCGGGTTTTGGCTCAGTCGATTAATGTTCCTGGTCTAGTGGTTGGGCACAAGCAAAGTCAACATAAGGGATCGGGAAAATCTAAAAGATCAGTTAAAATGATGTGTGCTCTGCGAACAAGTGGATTAAGAATGCCAGGTTTCTCAGGACTTCGTACTATCAATCATTTGGATACTATGCTGAAACCTGGGCTAGATTTTCACGCAAAGGTATCAATGGCAATTTCTACACGGCGGGCAAGGGCTAAGAGAATCATACCTAGAGCCATGTTTGAGCGTTTCACGGAGAAAGCAATCAAAGTGATAATGTTAGCTCAAGAGGAGGCAAGGCGTCTTGGTCACAATTTTGTTGGAACAGAGCAGATTCTACTGGGTCTTATTGGTGAAGGCACTGGTATCGCCGCCAAGGTTTTAAAGTCTATGGGAATCAACCTTAAAGATGCACGAGTGGAAGTGGAGAAGATAATTGGAAGAGGTAGTGGATTTGTTGCCGTTGAAATTCCGTTTACTCCTCGTGCAAAGCGTGTATTGGAACTTTCACTCGAGGAAGCTCGCCAACTTGGGCACAATTATATTGGATCAGAACACTTGCTTCTAGGTCTTCTTCGAGAGGGTGAGGGTGTAGCAGCCCGTGTTCTTGAAAACCTGGGCGCTGATCCTACTAATATTCGCACACAGGTTATTCGCATGGTGGGTGAGAGTGCTGACAATGTTACTGCTACTGTTGGCTCGGGAAGTAGTAACAATAAAACACCAACTTTGGAGGAGTATGGAACCAATTTGACCAAGCTCGCAGAAGAGGGAAAGTTGGATCCTGTTGTGGGAAGACAGCCACAAATTGAACGTGTCACCCAAATTTTAGGCCGTCGCACCAAAAATAATCCTTGTCTTATTGGAGAACCTGGTGTTGGGAAGACAGCAATTGCTGAAGGTCTTGCTCAGCGGATTGCAAATGGTGATGTACCTGAAACAATCGAGGGAAAAAAGGTTATAACCCTCGACATGGGTCTGCTTGTAGCCGGTACTAAATACCGTGGTGAGTTTGAGGAGAGGTTGAAGAAACTGATGGAAGAAATCAAACAAAGTGATGATATAATACTTTTTATCGATGAAGTGCACACACTAATTGGAGCAGGAGCAGCCGAAGGTGCAATTGATGCTGCTAACATACTAAAACCAGCTCTTGCAAGAGGCGAACTACAGTGTATTGGAGCCACAACATTGGATGAATACAGGAAGCACATCGAAAAAGACCCAGCTTTGGAGAGACGATTCCAGCCAGTTAAAGTACCAGAACCAACTGTTGATGAAACCATACAAATACTGAAAGGACTTAGAGAACGTTATGAAATTCACCACAAGCTTCGATATACTGATGACGCTCTTATAGCTGCTGCGCAACTTTCATACCAGTATATCAGTGATCGATTTTTGCCCGACAAAGCCATTGATTTGATTGATGAAGCTGGTTCACGAGTCCGTCTTCAACATGCACAGTTGCCAGAAGAGGCAAAAGAACTTGACAAGGAGGTCAGGAAGATTGTTAAAGAGAAAGAGGAATTTGTTCGCAACCAAGACTTTGAAAAGGCTGGAGAACTACGTGATAAAGAAATGGATCTAAGGGCGCAGATCTCGGCACTTGTAGAGAAAGGCAAGGAGATGAGCAAAGCAGAGAGTGAGGCAGCAGACGAAGGTCCTATTGTGACTGAAGTTGACATTCAACATATCGTGTCCTCCTGGACGGGCATTCCTGTTGATAAAGTCTCAGCAGATGAATCTGATCGCCTCCTCAAGATGGAAGATACTTTACACAAGCGAGTCATTGGTCAGGATGAAGCAGTAGAAGCCATTAGTCGGGCTATCCGTCGAGCACGGGTTGGATTGAAGAACCCTAACCGTCCAATTGCTAGCTTCATCTTTTCTGGTCCAACTGGTGTGGGGAAGTCTGAATTGGCCAAAGCATTGGCTGCCTACTACTTTGGCTCTGAAGAAGCCATGATTCGTCTTGACATGAGTGAGTTTATGGAAAGGCACACTGTCTCCAAACTTATTGGTTCACCTCCTGGATATGTTGGTTACACTGAAGGTGGTCAGTTGACTGAAGCAGTTCGTCGTCGTCCTTACACTGTTGTACTCTTTGATGAGATCGAGAAAGCCCATCCTGATGTATTCAACATGATGCTTCAGATCCTTGAAGATGGAAGACTAACGGACAGTAAAGGCCGAACTGTGGATTTCAAGAACACACTTCTTATAATGACGTCAAATGTTGGAAGCAGTGTGATTGAGAAAGGAGGTCGCCGAATTGGATTCGATCTTGATTATGATGAGAAAGACAGCAGTTATAATAGAATCAAGAGTTTGGTGACTGAGGAACTAAAACAATACTTCAGGCCAGAGTTTTTAAATAGGTTGGATGAAATGATTGTTTTCAGGCAACTCACAAAACTGGAGGTGAAGGAAATAGCAGACATAATGCTCAGGGAGGTGTTTCAGAGACTGAAGAACAAAGAAATTGAACTTCAAGTAACAGAAAGATTTAGGGACAGGGTGGTTGACGAAGGTTATAATCCTAGCTATGGAGCCAGGCCTTTAAGAAGAGCCATCATGCGACTTTTGGAGGATAGCATGGCTGAGAAGATGCTCGCCAGAGAGATCAAAGAGGGTGACTCCGTAATAGTGGATGTTGATTCCGACGGTAATGTGATTGTTCTCAATGGTACCAGCGGTACTCAAGAGTCATTACCAGAGGCTCTTGCTATATAA
Protein sequence

>Msa0378670

MARVLAQSINVPGLVVGHKQSQHKGSGKSKRSVKMMCALRTSGLRMPGFSGLRTINHLDTMLKPGLDFHAKVSMAISTRRARAKRIIPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGESADNVTATVGSGSSNNKTPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDDALIAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLQHAQLPEEAKELDKEVRKIVKEKEEFVRNQDFEKAGELRDKEMDLRAQISALVEKGKEMSKAESEAADEGPIVTEVDIQHIVSSWTGIPVDKVSADESDRLLKMEDTLHKRVIGQDEAVEAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLREVFQRLKNKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVIVLNGTSGTQESLPEALAI*