Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0275070 | XP_021806465.1 | 82.677 | 127 | 16 | 3 | 1 | 127 | 1 | 121 | 2.50e-57 | 194 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0275070 | sp|F4JZL7|HIP33_ARATH | 74.380 | 121 | 24 | 2 | 1 | 114 | 1 | 121 | 1.76e-47 | 163 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0275070 | A0A6P5RNI6 | 82.677 | 127 | 16 | 3 | 1 | 127 | 1 | 121 | 1.19e-57 | 194 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0196190 | Msa0275070 | 0.834436 | 3.001434e-56 | -8.615850e-47 |
| Msa0238090 | Msa0275070 | 0.813474 | 2.512895e-51 | -8.615850e-47 |
| Msa0275070 | Msa0275080 | 0.800476 | 1.415955e-48 | -8.615850e-47 |
| Msa0275070 | Msa0315980 | 0.829490 | 4.999855e-55 | -8.615850e-47 |
| Msa0275070 | Msa1024180 | 0.802708 | 4.935488e-49 | -8.615850e-47 |
| Msa0275070 | Msa1216090 | 0.800036 | 1.740076e-48 | -8.615850e-47 |
| Msa0275070 | Msa1216110 | 0.814559 | 1.448895e-51 | -8.615850e-47 |
| Msa0275070 | Msa1216340 | 0.811019 | 8.629870e-51 | -8.615850e-47 |
| Msa0275070 | Msa1349690 | 0.801627 | 8.235457e-49 | -8.615850e-47 |
| Msa0275070 | Msa1454500 | 0.807527 | 4.840487e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0275070 | MtrunA17_Chr2g0287751 | 96.970 | 99 | 3 | 0 | 1 | 99 | 1 | 99 | 3.11e-51 | 169 |
| Msa0275070 | MtrunA17_Chr4g0065621 | 88.000 | 100 | 11 | 1 | 1 | 99 | 1 | 100 | 1.59e-45 | 151 |
| Msa0275070 | MtrunA17_Chr0c22g0493881 | 88.000 | 100 | 11 | 1 | 1 | 99 | 1 | 100 | 3.55e-45 | 150 |
| Msa0275070 | MtrunA17_Chr4g0065651 | 88.000 | 100 | 11 | 1 | 1 | 99 | 1 | 100 | 8.75e-45 | 152 |
| Msa0275070 | MtrunA17_Chr1g0191671 | 63.866 | 119 | 39 | 2 | 1 | 115 | 1 | 119 | 6.95e-37 | 131 |
| Msa0275070 | MtrunA17_Chr1g0208301 | 70.513 | 78 | 20 | 1 | 1 | 75 | 1 | 78 | 1.06e-31 | 115 |
| Msa0275070 | MtrunA17_Chr2g0287741 | 76.667 | 90 | 21 | 0 | 10 | 99 | 15 | 104 | 2.12e-30 | 113 |
| Msa0275070 | MtrunA17_Chr7g0269081 | 67.143 | 70 | 23 | 0 | 5 | 74 | 17 | 86 | 6.57e-26 | 98.6 |
| Msa0275070 | MtrunA17_Chr4g0067291 | 50.000 | 104 | 49 | 2 | 2 | 102 | 66 | 169 | 9.67e-25 | 96.3 |
| Msa0275070 | MtrunA17_Chr3g0111541 | 53.521 | 71 | 33 | 0 | 3 | 73 | 5 | 75 | 1.43e-20 | 82.8 |
| Msa0275070 | MtrunA17_Chr7g0272571 | 59.677 | 62 | 25 | 0 | 13 | 74 | 36 | 97 | 1.54e-19 | 82.4 |
| Msa0275070 | MtrunA17_Chr2g0296001 | 58.571 | 70 | 29 | 0 | 5 | 74 | 68 | 137 | 2.78e-18 | 79.0 |
| Msa0275070 | MtrunA17_Chr1g0192131 | 58.667 | 75 | 30 | 1 | 4 | 77 | 9 | 83 | 2.11e-17 | 76.6 |
| Msa0275070 | MtrunA17_Chr8g0382721 | 52.459 | 61 | 29 | 0 | 14 | 74 | 33 | 93 | 2.53e-15 | 67.8 |
| Msa0275070 | MtrunA17_Chr1g0198341 | 43.284 | 67 | 38 | 0 | 10 | 76 | 4 | 70 | 2.04e-14 | 63.5 |
| Msa0275070 | MtrunA17_Chr3g0124411 | 47.761 | 67 | 35 | 0 | 8 | 74 | 28 | 94 | 5.93e-14 | 64.3 |
| Msa0275070 | MtrunA17_Chr5g0407821 | 40.278 | 72 | 43 | 0 | 9 | 80 | 22 | 93 | 1.04e-13 | 63.5 |
| Msa0275070 | MtrunA17_Chr7g0218981 | 42.647 | 68 | 39 | 0 | 13 | 80 | 7 | 74 | 1.77e-13 | 62.4 |
| Msa0275070 | MtrunA17_Chr1g0160201 | 43.939 | 66 | 37 | 0 | 9 | 74 | 24 | 89 | 2.05e-13 | 62.8 |
| Msa0275070 | MtrunA17_Chr1g0189221 | 37.662 | 77 | 48 | 0 | 1 | 77 | 44 | 120 | 3.69e-13 | 62.8 |
| Msa0275070 | MtrunA17_Chr4g0050571 | 41.096 | 73 | 42 | 1 | 9 | 81 | 100 | 171 | 2.56e-12 | 60.5 |
| Msa0275070 | MtrunA17_Chr7g0251491 | 41.791 | 67 | 38 | 1 | 9 | 74 | 47 | 113 | 2.93e-12 | 60.1 |
| Msa0275070 | MtrunA17_Chr5g0404641 | 41.538 | 65 | 38 | 0 | 9 | 73 | 2 | 66 | 4.25e-12 | 59.7 |
| Msa0275070 | MtrunA17_Chr4g0028461 | 48.101 | 79 | 39 | 2 | 12 | 88 | 68 | 146 | 5.53e-12 | 61.2 |
| Msa0275070 | MtrunA17_Chr2g0325601 | 38.750 | 80 | 47 | 1 | 14 | 91 | 6 | 85 | 6.11e-12 | 58.9 |
| Msa0275070 | MtrunA17_Chr4g0036931 | 38.235 | 68 | 41 | 1 | 8 | 74 | 26 | 93 | 1.73e-11 | 57.8 |
| Msa0275070 | MtrunA17_Chr6g0448861 | 37.313 | 67 | 41 | 1 | 9 | 74 | 29 | 95 | 3.07e-11 | 57.4 |
| Msa0275070 | MtrunA17_Chr3g0145621 | 38.235 | 68 | 41 | 1 | 8 | 74 | 24 | 91 | 3.66e-11 | 57.0 |
| Msa0275070 | MtrunA17_Chr2g0285561 | 50.000 | 62 | 30 | 1 | 13 | 73 | 11 | 72 | 3.78e-11 | 58.5 |
| Msa0275070 | MtrunA17_Chr3g0094841 | 43.939 | 66 | 36 | 1 | 9 | 73 | 115 | 180 | 4.28e-11 | 58.2 |
| Msa0275070 | MtrunA17_Chr3g0115421 | 28.571 | 112 | 78 | 1 | 14 | 125 | 30 | 139 | 6.77e-11 | 56.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0275070 | AT5G19090.2 | 74.380 | 121 | 24 | 2 | 1 | 114 | 1 | 121 | 3.52e-49 | 163 |
| Msa0275070 | AT5G19090.3 | 74.380 | 121 | 24 | 2 | 1 | 114 | 1 | 121 | 3.52e-49 | 163 |
| Msa0275070 | AT3G06130.2 | 77.778 | 108 | 23 | 1 | 1 | 108 | 1 | 107 | 6.74e-49 | 159 |
| Msa0275070 | AT5G19090.5 | 74.380 | 121 | 24 | 2 | 1 | 114 | 1 | 121 | 1.79e-48 | 163 |
| Msa0275070 | AT5G19090.4 | 74.380 | 121 | 24 | 2 | 1 | 114 | 1 | 121 | 1.79e-48 | 163 |
| Msa0275070 | AT5G19090.1 | 74.380 | 121 | 24 | 2 | 1 | 114 | 1 | 121 | 1.79e-48 | 163 |
| Msa0275070 | AT3G06130.1 | 77.778 | 108 | 23 | 1 | 1 | 108 | 1 | 107 | 6.45e-48 | 160 |
| Msa0275070 | AT5G27690.1 | 60.241 | 83 | 33 | 0 | 5 | 87 | 25 | 107 | 9.63e-29 | 107 |
| Msa0275070 | AT3G05220.1 | 62.162 | 74 | 28 | 0 | 1 | 74 | 1 | 74 | 1.08e-28 | 109 |
| Msa0275070 | AT1G23000.1 | 58.824 | 85 | 31 | 2 | 1 | 82 | 1 | 84 | 1.61e-25 | 99.0 |
| Msa0275070 | AT1G23000.2 | 58.824 | 85 | 31 | 2 | 1 | 82 | 61 | 144 | 2.77e-25 | 99.0 |
| Msa0275070 | AT5G37860.1 | 53.425 | 73 | 34 | 0 | 1 | 73 | 1 | 73 | 6.18e-21 | 85.1 |
| Msa0275070 | AT1G56210.1 | 63.333 | 60 | 22 | 0 | 13 | 72 | 43 | 102 | 2.04e-18 | 79.7 |
| Msa0275070 | AT1G06330.1 | 48.438 | 64 | 33 | 0 | 14 | 77 | 6 | 69 | 2.51e-14 | 65.5 |
| Msa0275070 | AT3G56891.1 | 41.096 | 73 | 41 | 1 | 7 | 77 | 11 | 83 | 1.37e-13 | 63.9 |
| Msa0275070 | AT1G66240.1 | 40.299 | 67 | 40 | 0 | 10 | 76 | 33 | 99 | 7.40e-13 | 60.8 |
| Msa0275070 | AT4G10465.1 | 33.673 | 98 | 64 | 1 | 1 | 97 | 42 | 139 | 1.37e-12 | 61.6 |
| Msa0275070 | AT3G56891.2 | 43.103 | 58 | 33 | 0 | 20 | 77 | 3 | 60 | 1.46e-12 | 60.8 |
| Msa0275070 | AT3G02960.1 | 39.189 | 74 | 44 | 1 | 3 | 75 | 119 | 192 | 5.46e-12 | 60.8 |
| Msa0275070 | AT1G71050.1 | 40.984 | 61 | 36 | 0 | 14 | 74 | 32 | 92 | 1.13e-11 | 58.5 |
| Msa0275070 | AT1G22990.2 | 42.424 | 66 | 37 | 1 | 10 | 74 | 24 | 89 | 2.14e-11 | 57.8 |
| Msa0275070 | AT2G18196.1 | 36.364 | 77 | 49 | 0 | 1 | 77 | 37 | 113 | 2.96e-11 | 58.2 |
| Msa0275070 | AT3G56240.3 | 41.538 | 65 | 38 | 0 | 10 | 74 | 3 | 67 | 3.65e-11 | 56.6 |
| Msa0275070 | AT3G56240.1 | 41.538 | 65 | 38 | 0 | 10 | 74 | 3 | 67 | 3.65e-11 | 56.6 |
| Msa0275070 | AT1G22990.1 | 43.478 | 69 | 37 | 2 | 8 | 74 | 26 | 94 | 3.66e-11 | 57.4 |
| Msa0275070 | AT5G05365.1 | 43.548 | 62 | 35 | 0 | 14 | 75 | 7 | 68 | 5.74e-11 | 55.1 |
| Msa0275070 | AT4G23882.1 | 44.776 | 67 | 36 | 1 | 8 | 73 | 76 | 142 | 6.93e-11 | 58.2 |
Find 57 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGGGAAGGTGACCGTTTC+TGG | 0.126298 | 2_3:+6988839 | Msa0275070:CDS |
| AAGAATTTCACGATTAAAAT+AGG | 0.136483 | 2_3:+6987436 | Msa0275070:five_prime_UTR |
| AGCTTCTTGATGAGAATATT+TGG | 0.155111 | 2_3:-6988872 | None:intergenic |
| ATCAAGAAGCTTGCAAAATC+AGG | 0.297726 | 2_3:+6988884 | Msa0275070:CDS |
| TTTGATTTGCAATGTTGTTC+TGG | 0.302117 | 2_3:-6988958 | None:intergenic |
| AGGGAAACATGCAGAACTTT+GGG | 0.332545 | 2_3:+6988904 | Msa0275070:CDS |
| TTATTGTTGTTGTTTGCCTT+TGG | 0.363526 | 2_3:-6988932 | None:intergenic |
| ACACTATTAAAAGGATTTAG+AGG | 0.369620 | 2_3:+6989314 | Msa0275070:intron |
| GCTTCTTGATGAGAATATTT+GGG | 0.388512 | 2_3:-6988871 | None:intergenic |
| AGAATTTCACGATTAAAATA+GGG | 0.391505 | 2_3:+6987437 | Msa0275070:five_prime_UTR |
| CCCATAAATAATGGCACAAA+AGG | 0.401064 | 2_3:+6987516 | Msa0275070:five_prime_UTR |
| GGAGGATGGAGGAGGATGCT+TGG | 0.405007 | 2_3:+6989335 | Msa0275070:CDS |
| CAGGGAAACATGCAGAACTT+TGG | 0.405425 | 2_3:+6988903 | Msa0275070:CDS |
| AAAATCCTGCAGAAGATTGA+TGG | 0.406796 | 2_3:+6988200 | Msa0275070:CDS |
| TTTAGCAACCATGGATGTCT+TGG | 0.429098 | 2_3:-6987483 | None:intergenic |
| TCTTACCATCAATCTTCTGC+AGG | 0.443531 | 2_3:-6988205 | None:intergenic |
| AGGATGCTTGGTGGTGGATG+AGG | 0.444614 | 2_3:+6989347 | Msa0275070:CDS |
| TAAAAGGATTTAGAGGAGGA+TGG | 0.448257 | 2_3:+6989321 | Msa0275070:intron |
| TGGAGGAGGATGCTTGGTGG+TGG | 0.455852 | 2_3:+6989341 | Msa0275070:CDS |
| ATCAAAGGGTTCTAACAAAG+AGG | 0.460794 | 2_3:-6987867 | None:intergenic |
| AGTGAGAAGATGAACAGAAA+GGG | 0.469058 | 2_3:-6987611 | None:intergenic |
| ATGCAAATTGACAATGGAAA+AGG | 0.473035 | 2_3:+6988989 | Msa0275070:CDS |
| TTAGCAACCATGGATGTCTT+GGG | 0.479505 | 2_3:-6987482 | None:intergenic |
| TGGGTCCACATTTCCAGAAA+CGG | 0.497187 | 2_3:-6988852 | None:intergenic |
| GATTTAGAGGAGGATGGAGG+AGG | 0.498653 | 2_3:+6989327 | Msa0275070:CDS |
| AAGGATTTAGAGGAGGATGG+AGG | 0.504423 | 2_3:+6989324 | Msa0275070:intron |
| GCAATGGGAGAAAAGAAAGA+AGG | 0.508873 | 2_3:-6987741 | None:intergenic |
| GACAATGGAAAAGGTGGTGG+AGG | 0.511844 | 2_3:+6988998 | Msa0275070:CDS |
| CAATGGGAGAAAAGAAAGAA+GGG | 0.534511 | 2_3:-6987740 | None:intergenic |
| AAAGAGGGAGAAATGTAGAA+AGG | 0.536287 | 2_3:-6987851 | None:intergenic |
| TAGTGAGAAGATGAACAGAA+AGG | 0.543002 | 2_3:-6987612 | None:intergenic |
| GGATGGAGGAGGATGCTTGG+TGG | 0.544822 | 2_3:+6989338 | Msa0275070:CDS |
| AGAACTTTGGGGTGCTCCAA+AGG | 0.546283 | 2_3:+6988916 | Msa0275070:CDS |
| GGGGTGTGAAGAAGAAGGCT+TGG | 0.550165 | 2_3:-6987699 | None:intergenic |
| TCAAGAAGCTTGCAAAATCA+GGG | 0.551852 | 2_3:+6988885 | Msa0275070:CDS |
| GTGAGAAGATGAACAGAAAG+GGG | 0.552020 | 2_3:-6987610 | None:intergenic |
| TTTGTGCCATTATTTATGGG+GGG | 0.555882 | 2_3:-6987513 | None:intergenic |
| TCAAAGGGTTCTAACAAAGA+GGG | 0.561418 | 2_3:-6987866 | None:intergenic |
| ATTGACAATGGAAAAGGTGG+TGG | 0.565333 | 2_3:+6988995 | Msa0275070:CDS |
| AAAGTTTCCCAAGACATCCA+TGG | 0.573799 | 2_3:+6987475 | Msa0275070:five_prime_UTR |
| TTGTGCCATTATTTATGGGG+GGG | 0.574181 | 2_3:-6987512 | None:intergenic |
| AGGGTGTGTGAATATAAGCA+AGG | 0.579993 | 2_3:-6987721 | None:intergenic |
| AAGAACATGCAAATTGACAA+TGG | 0.586548 | 2_3:+6988983 | Msa0275070:CDS |
| GGGTGTGTGAATATAAGCAA+GGG | 0.587286 | 2_3:-6987720 | None:intergenic |
| GGTGACCGTTTCTGGAAATG+TGG | 0.604667 | 2_3:+6988847 | Msa0275070:CDS |
| GAAAGGTTGAGAACATAACT+AGG | 0.604718 | 2_3:-6987834 | None:intergenic |
| AGAGAAAGATGAGAAATGTG+AGG | 0.610284 | 2_3:-6987638 | None:intergenic |
| ACTGAGATAGATGCTGAACA+AGG | 0.610845 | 2_3:+6988821 | Msa0275070:CDS |
| GATAGATGCTGAACAAGGGA+AGG | 0.625794 | 2_3:+6988826 | Msa0275070:CDS |
| GGGTATGTATTTAGCAACCA+TGG | 0.635947 | 2_3:-6987492 | None:intergenic |
| GGGAAACATGCAGAACTTTG+GGG | 0.640585 | 2_3:+6988905 | Msa0275070:CDS |
| CAAATTGACAATGGAAAAGG+TGG | 0.648543 | 2_3:+6988992 | Msa0275070:CDS |
| CTGAGATAGATGCTGAACAA+GGG | 0.650734 | 2_3:+6988822 | Msa0275070:CDS |
| CTATTAAAAGGATTTAGAGG+AGG | 0.656018 | 2_3:+6989317 | Msa0275070:intron |
| GGTGTGTGAATATAAGCAAG+GGG | 0.670704 | 2_3:-6987719 | None:intergenic |
| AAAGTGAACATACACTGTGA+CGG | 0.675992 | 2_3:+6988158 | Msa0275070:CDS |
| GTGTGTGAATATAAGCAAGG+GGG | 0.725063 | 2_3:-6987718 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTAGTTTTATAGATGA+AGG | - | chr2_3:6987775-6987794 | None:intergenic | 15.0% |
| !!! | CTCATTTTTTTTTTATCAAA+GGG | - | chr2_3:6987884-6987903 | None:intergenic | 15.0% |
| !!! | ACTCATTTTTTTTTTATCAA+AGG | - | chr2_3:6987885-6987904 | None:intergenic | 15.0% |
| !!! | TTATGAGTATTTTTTTTCAT+GGG | - | chr2_3:6988528-6988547 | None:intergenic | 15.0% |
| !!! | TTTATGAGTATTTTTTTTCA+TGG | - | chr2_3:6988529-6988548 | None:intergenic | 15.0% |
| !!! | ATATTTAGTTTTATAGATGA+AGG | - | chr2_3:6987775-6987794 | None:intergenic | 15.0% |
| !!! | CTCATTTTTTTTTTATCAAA+GGG | - | chr2_3:6987884-6987903 | None:intergenic | 15.0% |
| !!! | ACTCATTTTTTTTTTATCAA+AGG | - | chr2_3:6987885-6987904 | None:intergenic | 15.0% |
| !!! | TTATGAGTATTTTTTTTCAT+GGG | - | chr2_3:6988528-6988547 | None:intergenic | 15.0% |
| !!! | TTTATGAGTATTTTTTTTCA+TGG | - | chr2_3:6988529-6988548 | None:intergenic | 15.0% |
| !! | AAGAATTTCACGATTAAAAT+AGG | + | chr2_3:6987436-6987455 | Msa0275070:five_prime_UTR | 20.0% |
| !! | AGAATTTCACGATTAAAATA+GGG | + | chr2_3:6987437-6987456 | Msa0275070:five_prime_UTR | 20.0% |
| !! | ATGACATTTCTAATAAAGTA+AGG | + | chr2_3:6988055-6988074 | Msa0275070:intron | 20.0% |
| !!! | GTAACACTAATTTTTTCTTT+TGG | + | chr2_3:6988099-6988118 | Msa0275070:intron | 20.0% |
| !!! | CTAATTTTTTCTTTTGGTTT+TGG | + | chr2_3:6988105-6988124 | Msa0275070:intron | 20.0% |
| !!! | AAACTTTTTTTTAAGCAAGT+TGG | - | chr2_3:6988251-6988270 | None:intergenic | 20.0% |
| !!! | AGGTATATACATTTTTTTCT+TGG | - | chr2_3:6988597-6988616 | None:intergenic | 20.0% |
| !!! | ATGATTTAAGATATAACAAG+TGG | - | chr2_3:6988748-6988767 | None:intergenic | 20.0% |
| !!! | ATTGTGTAACTTAATTTTGT+AGG | + | chr2_3:6988788-6988807 | Msa0275070:intron | 20.0% |
| !!! | TTGTGTAACTTAATTTTGTA+GGG | + | chr2_3:6988789-6988808 | Msa0275070:intron | 20.0% |
| !! | TGATTTAATTAATGAGTTGT+TGG | + | chr2_3:6989291-6989310 | Msa0275070:intron | 20.0% |
| !! | AAGAATTTCACGATTAAAAT+AGG | + | chr2_3:6987436-6987455 | Msa0275070:five_prime_UTR | 20.0% |
| !! | AGAATTTCACGATTAAAATA+GGG | + | chr2_3:6987437-6987456 | Msa0275070:five_prime_UTR | 20.0% |
| !! | ATGACATTTCTAATAAAGTA+AGG | + | chr2_3:6988055-6988074 | Msa0275070:intron | 20.0% |
| !!! | GTAACACTAATTTTTTCTTT+TGG | + | chr2_3:6988099-6988118 | Msa0275070:intron | 20.0% |
| !!! | CTAATTTTTTCTTTTGGTTT+TGG | + | chr2_3:6988105-6988124 | Msa0275070:intron | 20.0% |
| !!! | AAACTTTTTTTTAAGCAAGT+TGG | - | chr2_3:6988251-6988270 | None:intergenic | 20.0% |
| !!! | AGGTATATACATTTTTTTCT+TGG | - | chr2_3:6988597-6988616 | None:intergenic | 20.0% |
| !!! | ATGATTTAAGATATAACAAG+TGG | - | chr2_3:6988748-6988767 | None:intergenic | 20.0% |
| !!! | ATTGTGTAACTTAATTTTGT+AGG | + | chr2_3:6988788-6988807 | Msa0275070:intron | 20.0% |
| !!! | TTGTGTAACTTAATTTTGTA+GGG | + | chr2_3:6988789-6988808 | Msa0275070:intron | 20.0% |
| !! | TGATTTAATTAATGAGTTGT+TGG | + | chr2_3:6989291-6989310 | Msa0275070:intron | 20.0% |
| !!! | AGTTTTATAGATGAAGGTTT+TGG | - | chr2_3:6987769-6987788 | None:intergenic | 25.0% |
| ! | GACTATGAATATGAATGAAA+AGG | - | chr2_3:6988281-6988300 | None:intergenic | 25.0% |
| !! | ACTTTTCTTTGATCTGTTAT+TGG | + | chr2_3:6988464-6988483 | Msa0275070:intron | 25.0% |
| ! | GTATCAATATGAATGAAATG+AGG | - | chr2_3:6988617-6988636 | None:intergenic | 25.0% |
| !! | ATTTAAGATATAACAAGTGG+TGG | - | chr2_3:6988745-6988764 | None:intergenic | 25.0% |
| !! | TGTGTAACTTAATTTTGTAG+GGG | + | chr2_3:6988790-6988809 | Msa0275070:intron | 25.0% |
| !! | NNNNNNNATTTTGCCCTTGT+TGG | - | chr2_3:6989087-6989106 | None:intergenic | 25.0% |
| ! | ACACTATTAAAAGGATTTAG+AGG | + | chr2_3:6989314-6989333 | Msa0275070:intron | 25.0% |
| !!! | AGTTTTATAGATGAAGGTTT+TGG | - | chr2_3:6987769-6987788 | None:intergenic | 25.0% |
| ! | GACTATGAATATGAATGAAA+AGG | - | chr2_3:6988281-6988300 | None:intergenic | 25.0% |
| !! | ACTTTTCTTTGATCTGTTAT+TGG | + | chr2_3:6988464-6988483 | Msa0275070:intron | 25.0% |
| ! | GTATCAATATGAATGAAATG+AGG | - | chr2_3:6988617-6988636 | None:intergenic | 25.0% |
| !! | ATTTAAGATATAACAAGTGG+TGG | - | chr2_3:6988745-6988764 | None:intergenic | 25.0% |
| !! | TGTGTAACTTAATTTTGTAG+GGG | + | chr2_3:6988790-6988809 | Msa0275070:intron | 25.0% |
| !! | NNNNNNNATTTTGCCCTTGT+TGG | - | chr2_3:6989087-6989106 | None:intergenic | 25.0% |
| ! | ACACTATTAAAAGGATTTAG+AGG | + | chr2_3:6989314-6989333 | Msa0275070:intron | 25.0% |
| !! | TTTTGTGCCATTATTTATGG+GGG | - | chr2_3:6987517-6987536 | None:intergenic | 30.0% |
| !! | CTTTTGTGCCATTATTTATG+GGG | - | chr2_3:6987518-6987537 | None:intergenic | 30.0% |
| !! | CCTTTTGTGCCATTATTTAT+GGG | - | chr2_3:6987519-6987538 | None:intergenic | 30.0% |
| !! | TCCTTTTGTGCCATTATTTA+TGG | - | chr2_3:6987520-6987539 | None:intergenic | 30.0% |
| !! | AGAAGAGATTTTGAAGATAC+AGG | + | chr2_3:6987907-6987926 | Msa0275070:CDS | 30.0% |
| !!! | ACATTTTTTTCTTGGTCGAA+AGG | - | chr2_3:6988589-6988608 | None:intergenic | 30.0% |
| ! | CAAGAGTACAAAGTAAAACA+TGG | - | chr2_3:6988668-6988687 | None:intergenic | 30.0% |
| GCTTCTTGATGAGAATATTT+GGG | - | chr2_3:6988874-6988893 | None:intergenic | 30.0% | |
| AGCTTCTTGATGAGAATATT+TGG | - | chr2_3:6988875-6988894 | None:intergenic | 30.0% | |
| !! | TTATTGTTGTTGTTTGCCTT+TGG | - | chr2_3:6988935-6988954 | None:intergenic | 30.0% |
| !! | TTTGATTTGCAATGTTGTTC+TGG | - | chr2_3:6988961-6988980 | None:intergenic | 30.0% |
| AAGAACATGCAAATTGACAA+TGG | + | chr2_3:6988983-6989002 | Msa0275070:CDS | 30.0% | |
| ATGCAAATTGACAATGGAAA+AGG | + | chr2_3:6988989-6989008 | Msa0275070:CDS | 30.0% | |
| AAATAACCAAAATCAGCCAA+AGG | + | chr2_3:6989054-6989073 | Msa0275070:intron | 30.0% | |
| AATAACCAAAATCAGCCAAA+GGG | + | chr2_3:6989055-6989074 | Msa0275070:intron | 30.0% | |
| AGTTGTTGGACACTATTAAA+AGG | + | chr2_3:6989305-6989324 | Msa0275070:intron | 30.0% | |
| CTATTAAAAGGATTTAGAGG+AGG | + | chr2_3:6989317-6989336 | Msa0275070:intron | 30.0% | |
| !! | TTTTGTGCCATTATTTATGG+GGG | - | chr2_3:6987517-6987536 | None:intergenic | 30.0% |
| !! | CTTTTGTGCCATTATTTATG+GGG | - | chr2_3:6987518-6987537 | None:intergenic | 30.0% |
| !! | CCTTTTGTGCCATTATTTAT+GGG | - | chr2_3:6987519-6987538 | None:intergenic | 30.0% |
| !! | TCCTTTTGTGCCATTATTTA+TGG | - | chr2_3:6987520-6987539 | None:intergenic | 30.0% |
| !! | AGAAGAGATTTTGAAGATAC+AGG | + | chr2_3:6987907-6987926 | Msa0275070:CDS | 30.0% |
| !!! | ACATTTTTTTCTTGGTCGAA+AGG | - | chr2_3:6988589-6988608 | None:intergenic | 30.0% |
| ! | CAAGAGTACAAAGTAAAACA+TGG | - | chr2_3:6988668-6988687 | None:intergenic | 30.0% |
| GCTTCTTGATGAGAATATTT+GGG | - | chr2_3:6988874-6988893 | None:intergenic | 30.0% | |
| AGCTTCTTGATGAGAATATT+TGG | - | chr2_3:6988875-6988894 | None:intergenic | 30.0% | |
| !! | TTATTGTTGTTGTTTGCCTT+TGG | - | chr2_3:6988935-6988954 | None:intergenic | 30.0% |
| !! | TTTGATTTGCAATGTTGTTC+TGG | - | chr2_3:6988961-6988980 | None:intergenic | 30.0% |
| AAGAACATGCAAATTGACAA+TGG | + | chr2_3:6988983-6989002 | Msa0275070:CDS | 30.0% | |
| ATGCAAATTGACAATGGAAA+AGG | + | chr2_3:6988989-6989008 | Msa0275070:CDS | 30.0% | |
| AAATAACCAAAATCAGCCAA+AGG | + | chr2_3:6989054-6989073 | Msa0275070:intron | 30.0% | |
| AATAACCAAAATCAGCCAAA+GGG | + | chr2_3:6989055-6989074 | Msa0275070:intron | 30.0% | |
| AGTTGTTGGACACTATTAAA+AGG | + | chr2_3:6989305-6989324 | Msa0275070:intron | 30.0% | |
| CTATTAAAAGGATTTAGAGG+AGG | + | chr2_3:6989317-6989336 | Msa0275070:intron | 30.0% | |
| ! | TTTGTGCCATTATTTATGGG+GGG | - | chr2_3:6987516-6987535 | None:intergenic | 35.0% |
| CCCATAAATAATGGCACAAA+AGG | + | chr2_3:6987516-6987535 | Msa0275070:five_prime_UTR | 35.0% | |
| AGTGAGAAGATGAACAGAAA+GGG | - | chr2_3:6987614-6987633 | None:intergenic | 35.0% | |
| TAGTGAGAAGATGAACAGAA+AGG | - | chr2_3:6987615-6987634 | None:intergenic | 35.0% | |
| AGAGAAAGATGAGAAATGTG+AGG | - | chr2_3:6987641-6987660 | None:intergenic | 35.0% | |
| GAGTTAGAGAGAAAAATGGT+GGG | - | chr2_3:6987680-6987699 | None:intergenic | 35.0% | |
| CTTGGAGTTAGAGAGAAAAA+TGG | - | chr2_3:6987684-6987703 | None:intergenic | 35.0% | |
| CAATGGGAGAAAAGAAAGAA+GGG | - | chr2_3:6987743-6987762 | None:intergenic | 35.0% | |
| !!! | ATGAAGGTTTTGGAAGCAAT+GGG | - | chr2_3:6987759-6987778 | None:intergenic | 35.0% |
| GAAAGGTTGAGAACATAACT+AGG | - | chr2_3:6987837-6987856 | None:intergenic | 35.0% | |
| AAAGAGGGAGAAATGTAGAA+AGG | - | chr2_3:6987854-6987873 | None:intergenic | 35.0% | |
| ! | TCAAAGGGTTCTAACAAAGA+GGG | - | chr2_3:6987869-6987888 | None:intergenic | 35.0% |
| ! | ATCAAAGGGTTCTAACAAAG+AGG | - | chr2_3:6987870-6987889 | None:intergenic | 35.0% |
| AAAGTGAACATACACTGTGA+CGG | + | chr2_3:6988158-6988177 | Msa0275070:CDS | 35.0% | |
| AAAATCCTGCAGAAGATTGA+TGG | + | chr2_3:6988200-6988219 | Msa0275070:CDS | 35.0% | |
| AAGTTGGAAGAGTGAATATG+AGG | - | chr2_3:6988235-6988254 | None:intergenic | 35.0% | |
| CAAACTGTGACGATATGAAT+TGG | - | chr2_3:6988411-6988430 | None:intergenic | 35.0% | |
| TACAAACAGTAGTGAGAGAA+TGG | - | chr2_3:6988436-6988455 | None:intergenic | 35.0% | |
| ! | TATTGGTAACAGTGAGCATA+TGG | + | chr2_3:6988481-6988500 | Msa0275070:intron | 35.0% |
| ATCAAGAAGCTTGCAAAATC+AGG | + | chr2_3:6988884-6988903 | Msa0275070:CDS | 35.0% | |
| TCAAGAAGCTTGCAAAATCA+GGG | + | chr2_3:6988885-6988904 | Msa0275070:CDS | 35.0% | |
| CAAATTGACAATGGAAAAGG+TGG | + | chr2_3:6988992-6989011 | Msa0275070:CDS | 35.0% | |
| TGGAGGAAACAAAAACAACA+AGG | + | chr2_3:6989015-6989034 | Msa0275070:CDS | 35.0% | |
| GGAGGAAACAAAAACAACAA+GGG | + | chr2_3:6989016-6989035 | Msa0275070:CDS | 35.0% | |
| GAGGAAACAAAAACAACAAG+GGG | + | chr2_3:6989017-6989036 | Msa0275070:CDS | 35.0% | |
| AAAAACAACAAGGGGCAAAA+GGG | + | chr2_3:6989025-6989044 | Msa0275070:CDS | 35.0% | |
| GAAAATGCTCCTATGTATGA+CGG | + | chr2_3:6989213-6989232 | Msa0275070:intron | 35.0% | |
| GAGGAGATCACATATCAATT+GGG | + | chr2_3:6989264-6989283 | Msa0275070:intron | 35.0% | |
| TAAAAGGATTTAGAGGAGGA+TGG | + | chr2_3:6989321-6989340 | Msa0275070:intron | 35.0% | |
| ! | TTTGTGCCATTATTTATGGG+GGG | - | chr2_3:6987516-6987535 | None:intergenic | 35.0% |
| CCCATAAATAATGGCACAAA+AGG | + | chr2_3:6987516-6987535 | Msa0275070:five_prime_UTR | 35.0% | |
| AGTGAGAAGATGAACAGAAA+GGG | - | chr2_3:6987614-6987633 | None:intergenic | 35.0% | |
| TAGTGAGAAGATGAACAGAA+AGG | - | chr2_3:6987615-6987634 | None:intergenic | 35.0% | |
| AGAGAAAGATGAGAAATGTG+AGG | - | chr2_3:6987641-6987660 | None:intergenic | 35.0% | |
| GAGTTAGAGAGAAAAATGGT+GGG | - | chr2_3:6987680-6987699 | None:intergenic | 35.0% | |
| CTTGGAGTTAGAGAGAAAAA+TGG | - | chr2_3:6987684-6987703 | None:intergenic | 35.0% | |
| CAATGGGAGAAAAGAAAGAA+GGG | - | chr2_3:6987743-6987762 | None:intergenic | 35.0% | |
| !!! | ATGAAGGTTTTGGAAGCAAT+GGG | - | chr2_3:6987759-6987778 | None:intergenic | 35.0% |
| GAAAGGTTGAGAACATAACT+AGG | - | chr2_3:6987837-6987856 | None:intergenic | 35.0% | |
| AAAGAGGGAGAAATGTAGAA+AGG | - | chr2_3:6987854-6987873 | None:intergenic | 35.0% | |
| ! | TCAAAGGGTTCTAACAAAGA+GGG | - | chr2_3:6987869-6987888 | None:intergenic | 35.0% |
| ! | ATCAAAGGGTTCTAACAAAG+AGG | - | chr2_3:6987870-6987889 | None:intergenic | 35.0% |
| AAAGTGAACATACACTGTGA+CGG | + | chr2_3:6988158-6988177 | Msa0275070:CDS | 35.0% | |
| AAAATCCTGCAGAAGATTGA+TGG | + | chr2_3:6988200-6988219 | Msa0275070:CDS | 35.0% | |
| AAGTTGGAAGAGTGAATATG+AGG | - | chr2_3:6988235-6988254 | None:intergenic | 35.0% | |
| CAAACTGTGACGATATGAAT+TGG | - | chr2_3:6988411-6988430 | None:intergenic | 35.0% | |
| TACAAACAGTAGTGAGAGAA+TGG | - | chr2_3:6988436-6988455 | None:intergenic | 35.0% | |
| ! | TATTGGTAACAGTGAGCATA+TGG | + | chr2_3:6988481-6988500 | Msa0275070:intron | 35.0% |
| ATCAAGAAGCTTGCAAAATC+AGG | + | chr2_3:6988884-6988903 | Msa0275070:CDS | 35.0% | |
| TCAAGAAGCTTGCAAAATCA+GGG | + | chr2_3:6988885-6988904 | Msa0275070:CDS | 35.0% | |
| CAAATTGACAATGGAAAAGG+TGG | + | chr2_3:6988992-6989011 | Msa0275070:CDS | 35.0% | |
| TGGAGGAAACAAAAACAACA+AGG | + | chr2_3:6989015-6989034 | Msa0275070:CDS | 35.0% | |
| GGAGGAAACAAAAACAACAA+GGG | + | chr2_3:6989016-6989035 | Msa0275070:CDS | 35.0% | |
| GAGGAAACAAAAACAACAAG+GGG | + | chr2_3:6989017-6989036 | Msa0275070:CDS | 35.0% | |
| AAAAACAACAAGGGGCAAAA+GGG | + | chr2_3:6989025-6989044 | Msa0275070:CDS | 35.0% | |
| GAAAATGCTCCTATGTATGA+CGG | + | chr2_3:6989213-6989232 | Msa0275070:intron | 35.0% | |
| GAGGAGATCACATATCAATT+GGG | + | chr2_3:6989264-6989283 | Msa0275070:intron | 35.0% | |
| TAAAAGGATTTAGAGGAGGA+TGG | + | chr2_3:6989321-6989340 | Msa0275070:intron | 35.0% | |
| AAAGTTTCCCAAGACATCCA+TGG | + | chr2_3:6987475-6987494 | Msa0275070:five_prime_UTR | 40.0% | |
| TTAGCAACCATGGATGTCTT+GGG | - | chr2_3:6987485-6987504 | None:intergenic | 40.0% | |
| TTTAGCAACCATGGATGTCT+TGG | - | chr2_3:6987486-6987505 | None:intergenic | 40.0% | |
| GGGTATGTATTTAGCAACCA+TGG | - | chr2_3:6987495-6987514 | None:intergenic | 40.0% | |
| ACATACCCCCCCATAAATAA+TGG | + | chr2_3:6987507-6987526 | Msa0275070:five_prime_UTR | 40.0% | |
| ! | TTGTGCCATTATTTATGGGG+GGG | - | chr2_3:6987515-6987534 | None:intergenic | 40.0% |
| GTGAGAAGATGAACAGAAAG+GGG | - | chr2_3:6987613-6987632 | None:intergenic | 40.0% | |
| GGAGTTAGAGAGAAAAATGG+TGG | - | chr2_3:6987681-6987700 | None:intergenic | 40.0% | |
| GTGTGTGAATATAAGCAAGG+GGG | - | chr2_3:6987721-6987740 | None:intergenic | 40.0% | |
| GGTGTGTGAATATAAGCAAG+GGG | - | chr2_3:6987722-6987741 | None:intergenic | 40.0% | |
| GGGTGTGTGAATATAAGCAA+GGG | - | chr2_3:6987723-6987742 | None:intergenic | 40.0% | |
| AGGGTGTGTGAATATAAGCA+AGG | - | chr2_3:6987724-6987743 | None:intergenic | 40.0% | |
| GCAATGGGAGAAAAGAAAGA+AGG | - | chr2_3:6987744-6987763 | None:intergenic | 40.0% | |
| !!! | GATGAAGGTTTTGGAAGCAA+TGG | - | chr2_3:6987760-6987779 | None:intergenic | 40.0% |
| TCTTACCATCAATCTTCTGC+AGG | - | chr2_3:6988208-6988227 | None:intergenic | 40.0% | |
| TGTGACGATATGAATTGGCA+AGG | - | chr2_3:6988406-6988425 | None:intergenic | 40.0% | |
| ACTGAGATAGATGCTGAACA+AGG | + | chr2_3:6988821-6988840 | Msa0275070:CDS | 40.0% | |
| CTGAGATAGATGCTGAACAA+GGG | + | chr2_3:6988822-6988841 | Msa0275070:CDS | 40.0% | |
| AGGGAAACATGCAGAACTTT+GGG | + | chr2_3:6988904-6988923 | Msa0275070:CDS | 40.0% | |
| ATTGACAATGGAAAAGGTGG+TGG | + | chr2_3:6988995-6989014 | Msa0275070:CDS | 40.0% | |
| CAAAAACAACAAGGGGCAAA+AGG | + | chr2_3:6989024-6989043 | Msa0275070:CDS | 40.0% | |
| !!! | GGCTGATTTTGGTTATTTCC+AGG | - | chr2_3:6989052-6989071 | None:intergenic | 40.0% |
| GGAGGAGATCACATATCAAT+TGG | + | chr2_3:6989263-6989282 | Msa0275070:intron | 40.0% | |
| AAAGTTTCCCAAGACATCCA+TGG | + | chr2_3:6987475-6987494 | Msa0275070:five_prime_UTR | 40.0% | |
| TTAGCAACCATGGATGTCTT+GGG | - | chr2_3:6987485-6987504 | None:intergenic | 40.0% | |
| TTTAGCAACCATGGATGTCT+TGG | - | chr2_3:6987486-6987505 | None:intergenic | 40.0% | |
| GGGTATGTATTTAGCAACCA+TGG | - | chr2_3:6987495-6987514 | None:intergenic | 40.0% | |
| ACATACCCCCCCATAAATAA+TGG | + | chr2_3:6987507-6987526 | Msa0275070:five_prime_UTR | 40.0% | |
| ! | TTGTGCCATTATTTATGGGG+GGG | - | chr2_3:6987515-6987534 | None:intergenic | 40.0% |
| GTGAGAAGATGAACAGAAAG+GGG | - | chr2_3:6987613-6987632 | None:intergenic | 40.0% | |
| GGAGTTAGAGAGAAAAATGG+TGG | - | chr2_3:6987681-6987700 | None:intergenic | 40.0% | |
| GTGTGTGAATATAAGCAAGG+GGG | - | chr2_3:6987721-6987740 | None:intergenic | 40.0% | |
| GGTGTGTGAATATAAGCAAG+GGG | - | chr2_3:6987722-6987741 | None:intergenic | 40.0% | |
| GGGTGTGTGAATATAAGCAA+GGG | - | chr2_3:6987723-6987742 | None:intergenic | 40.0% | |
| AGGGTGTGTGAATATAAGCA+AGG | - | chr2_3:6987724-6987743 | None:intergenic | 40.0% | |
| GCAATGGGAGAAAAGAAAGA+AGG | - | chr2_3:6987744-6987763 | None:intergenic | 40.0% | |
| !!! | GATGAAGGTTTTGGAAGCAA+TGG | - | chr2_3:6987760-6987779 | None:intergenic | 40.0% |
| TCTTACCATCAATCTTCTGC+AGG | - | chr2_3:6988208-6988227 | None:intergenic | 40.0% | |
| TGTGACGATATGAATTGGCA+AGG | - | chr2_3:6988406-6988425 | None:intergenic | 40.0% | |
| ACTGAGATAGATGCTGAACA+AGG | + | chr2_3:6988821-6988840 | Msa0275070:CDS | 40.0% | |
| CTGAGATAGATGCTGAACAA+GGG | + | chr2_3:6988822-6988841 | Msa0275070:CDS | 40.0% | |
| AGGGAAACATGCAGAACTTT+GGG | + | chr2_3:6988904-6988923 | Msa0275070:CDS | 40.0% | |
| ATTGACAATGGAAAAGGTGG+TGG | + | chr2_3:6988995-6989014 | Msa0275070:CDS | 40.0% | |
| CAAAAACAACAAGGGGCAAA+AGG | + | chr2_3:6989024-6989043 | Msa0275070:CDS | 40.0% | |
| !!! | GGCTGATTTTGGTTATTTCC+AGG | - | chr2_3:6989052-6989071 | None:intergenic | 40.0% |
| GGAGGAGATCACATATCAAT+TGG | + | chr2_3:6989263-6989282 | Msa0275070:intron | 40.0% | |
| TGCAGAGTAGAAAAGTCAGG+TGG | - | chr2_3:6988383-6988402 | None:intergenic | 45.0% | |
| AGGTGCAGAGTAGAAAAGTC+AGG | - | chr2_3:6988386-6988405 | None:intergenic | 45.0% | |
| GATAGATGCTGAACAAGGGA+AGG | + | chr2_3:6988826-6988845 | Msa0275070:CDS | 45.0% | |
| TGGGTCCACATTTCCAGAAA+CGG | - | chr2_3:6988855-6988874 | None:intergenic | 45.0% | |
| CAGGGAAACATGCAGAACTT+TGG | + | chr2_3:6988903-6988922 | Msa0275070:CDS | 45.0% | |
| GGGAAACATGCAGAACTTTG+GGG | + | chr2_3:6988905-6988924 | Msa0275070:CDS | 45.0% | |
| AACCAAAATCAGCCAAAGGG+TGG | + | chr2_3:6989058-6989077 | Msa0275070:intron | 45.0% | |
| AATGCTCCTATGTATGACGG+AGG | + | chr2_3:6989216-6989235 | Msa0275070:intron | 45.0% | |
| ! | ATGCTCCTATGTATGACGGA+GGG | + | chr2_3:6989217-6989236 | Msa0275070:intron | 45.0% |
| AAGGATTTAGAGGAGGATGG+AGG | + | chr2_3:6989324-6989343 | Msa0275070:intron | 45.0% | |
| TGCAGAGTAGAAAAGTCAGG+TGG | - | chr2_3:6988383-6988402 | None:intergenic | 45.0% | |
| AGGTGCAGAGTAGAAAAGTC+AGG | - | chr2_3:6988386-6988405 | None:intergenic | 45.0% | |
| GATAGATGCTGAACAAGGGA+AGG | + | chr2_3:6988826-6988845 | Msa0275070:CDS | 45.0% | |
| TGGGTCCACATTTCCAGAAA+CGG | - | chr2_3:6988855-6988874 | None:intergenic | 45.0% | |
| CAGGGAAACATGCAGAACTT+TGG | + | chr2_3:6988903-6988922 | Msa0275070:CDS | 45.0% | |
| GGGAAACATGCAGAACTTTG+GGG | + | chr2_3:6988905-6988924 | Msa0275070:CDS | 45.0% | |
| AACCAAAATCAGCCAAAGGG+TGG | + | chr2_3:6989058-6989077 | Msa0275070:intron | 45.0% | |
| AATGCTCCTATGTATGACGG+AGG | + | chr2_3:6989216-6989235 | Msa0275070:intron | 45.0% | |
| ! | ATGCTCCTATGTATGACGGA+GGG | + | chr2_3:6989217-6989236 | Msa0275070:intron | 45.0% |
| AAGGATTTAGAGGAGGATGG+AGG | + | chr2_3:6989324-6989343 | Msa0275070:intron | 45.0% | |
| GAGAGAGAGAGAGAGAGAGA+TGG | - | chr2_3:6987562-6987581 | None:intergenic | 50.0% | |
| ! | GGTGACCGTTTCTGGAAATG+TGG | + | chr2_3:6988847-6988866 | Msa0275070:CDS | 50.0% |
| !! | AGAACTTTGGGGTGCTCCAA+AGG | + | chr2_3:6988916-6988935 | Msa0275070:CDS | 50.0% |
| ! | GACAATGGAAAAGGTGGTGG+AGG | + | chr2_3:6988998-6989017 | Msa0275070:CDS | 50.0% |
| !! | CACCACCCTTTGGCTGATTT+TGG | - | chr2_3:6989063-6989082 | None:intergenic | 50.0% |
| CAAAATCAGCCAAAGGGTGG+TGG | + | chr2_3:6989061-6989080 | Msa0275070:intron | 50.0% | |
| TGGTGGGATGGTCGTTTGTT+TGG | + | chr2_3:6989242-6989261 | Msa0275070:intron | 50.0% | |
| TGGGATGGTCGTTTGTTTGG+AGG | + | chr2_3:6989245-6989264 | Msa0275070:intron | 50.0% | |
| GATTTAGAGGAGGATGGAGG+AGG | + | chr2_3:6989327-6989346 | Msa0275070:CDS | 50.0% | |
| GAGAGAGAGAGAGAGAGAGA+TGG | - | chr2_3:6987562-6987581 | None:intergenic | 50.0% | |
| ! | GGTGACCGTTTCTGGAAATG+TGG | + | chr2_3:6988847-6988866 | Msa0275070:CDS | 50.0% |
| !! | AGAACTTTGGGGTGCTCCAA+AGG | + | chr2_3:6988916-6988935 | Msa0275070:CDS | 50.0% |
| ! | GACAATGGAAAAGGTGGTGG+AGG | + | chr2_3:6988998-6989017 | Msa0275070:CDS | 50.0% |
| !! | CACCACCCTTTGGCTGATTT+TGG | - | chr2_3:6989063-6989082 | None:intergenic | 50.0% |
| CAAAATCAGCCAAAGGGTGG+TGG | + | chr2_3:6989061-6989080 | Msa0275070:intron | 50.0% | |
| TGGTGGGATGGTCGTTTGTT+TGG | + | chr2_3:6989242-6989261 | Msa0275070:intron | 50.0% | |
| TGGGATGGTCGTTTGTTTGG+AGG | + | chr2_3:6989245-6989264 | Msa0275070:intron | 50.0% | |
| GATTTAGAGGAGGATGGAGG+AGG | + | chr2_3:6989327-6989346 | Msa0275070:CDS | 50.0% | |
| GGGGTGTGAAGAAGAAGGCT+TGG | - | chr2_3:6987702-6987721 | None:intergenic | 55.0% | |
| ! | GCAAGGGGGTGTGAAGAAGA+AGG | - | chr2_3:6987707-6987726 | None:intergenic | 55.0% |
| CAAGGGAAGGTGACCGTTTC+TGG | + | chr2_3:6988839-6988858 | Msa0275070:CDS | 55.0% | |
| AACAAGGGGCAAAAGGGTCC+TGG | + | chr2_3:6989031-6989050 | Msa0275070:intron | 55.0% | |
| ! | CAAAGGGTGGTGGCCAACAA+GGG | + | chr2_3:6989071-6989090 | Msa0275070:intron | 55.0% |
| CCACACCCTCCGTCATACAT+AGG | - | chr2_3:6989225-6989244 | None:intergenic | 55.0% | |
| ! | CCTATGTATGACGGAGGGTG+TGG | + | chr2_3:6989222-6989241 | Msa0275070:intron | 55.0% |
| ! | ATGTATGACGGAGGGTGTGG+TGG | + | chr2_3:6989225-6989244 | Msa0275070:intron | 55.0% |
| ! | TGTATGACGGAGGGTGTGGT+GGG | + | chr2_3:6989226-6989245 | Msa0275070:intron | 55.0% |
| GGGGTGTGAAGAAGAAGGCT+TGG | - | chr2_3:6987702-6987721 | None:intergenic | 55.0% | |
| ! | GCAAGGGGGTGTGAAGAAGA+AGG | - | chr2_3:6987707-6987726 | None:intergenic | 55.0% |
| CAAGGGAAGGTGACCGTTTC+TGG | + | chr2_3:6988839-6988858 | Msa0275070:CDS | 55.0% | |
| AACAAGGGGCAAAAGGGTCC+TGG | + | chr2_3:6989031-6989050 | Msa0275070:intron | 55.0% | |
| ! | CAAAGGGTGGTGGCCAACAA+GGG | + | chr2_3:6989071-6989090 | Msa0275070:intron | 55.0% |
| CCACACCCTCCGTCATACAT+AGG | - | chr2_3:6989225-6989244 | None:intergenic | 55.0% | |
| ! | CCTATGTATGACGGAGGGTG+TGG | + | chr2_3:6989222-6989241 | Msa0275070:intron | 55.0% |
| ! | ATGTATGACGGAGGGTGTGG+TGG | + | chr2_3:6989225-6989244 | Msa0275070:intron | 55.0% |
| ! | TGTATGACGGAGGGTGTGGT+GGG | + | chr2_3:6989226-6989245 | Msa0275070:intron | 55.0% |
| CCTTGTTGGCCACCACCCTT+TGG | - | chr2_3:6989073-6989092 | None:intergenic | 60.0% | |
| ! | CCAAAGGGTGGTGGCCAACA+AGG | + | chr2_3:6989070-6989089 | Msa0275070:intron | 60.0% |
| GGAGGATGGAGGAGGATGCT+TGG | + | chr2_3:6989335-6989354 | Msa0275070:CDS | 60.0% | |
| GGATGGAGGAGGATGCTTGG+TGG | + | chr2_3:6989338-6989357 | Msa0275070:CDS | 60.0% | |
| ! | TGGAGGAGGATGCTTGGTGG+TGG | + | chr2_3:6989341-6989360 | Msa0275070:CDS | 60.0% |
| CCTTGTTGGCCACCACCCTT+TGG | - | chr2_3:6989073-6989092 | None:intergenic | 60.0% | |
| ! | CCAAAGGGTGGTGGCCAACA+AGG | + | chr2_3:6989070-6989089 | Msa0275070:intron | 60.0% |
| GGAGGATGGAGGAGGATGCT+TGG | + | chr2_3:6989335-6989354 | Msa0275070:CDS | 60.0% | |
| GGATGGAGGAGGATGCTTGG+TGG | + | chr2_3:6989338-6989357 | Msa0275070:CDS | 60.0% | |
| ! | TGGAGGAGGATGCTTGGTGG+TGG | + | chr2_3:6989341-6989360 | Msa0275070:CDS | 60.0% |
| ! | TGACGGAGGGTGTGGTGGGA+TGG | + | chr2_3:6989230-6989249 | Msa0275070:intron | 65.0% |
| ! | TGACGGAGGGTGTGGTGGGA+TGG | + | chr2_3:6989230-6989249 | Msa0275070:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 6987430 | 6989367 | 6987430 | ID=Msa0275070;Name=Msa0275070 |
| chr2_3 | mRNA | 6987430 | 6989367 | 6987430 | ID=Msa0275070-mRNA-1;Parent=Msa0275070;Name=Msa0275070-mRNA-1;_AED=0.05;_eAED=0.05;_QI=469|0.66|0.5|0.75|0.66|0.75|4|0|127 |
| chr2_3 | exon | 6987430 | 6987928 | 6987430 | ID=Msa0275070-mRNA-1:exon:3290;Parent=Msa0275070-mRNA-1 |
| chr2_3 | exon | 6988146 | 6988221 | 6988146 | ID=Msa0275070-mRNA-1:exon:3291;Parent=Msa0275070-mRNA-1 |
| chr2_3 | exon | 6988810 | 6989046 | 6988810 | ID=Msa0275070-mRNA-1:exon:3292;Parent=Msa0275070-mRNA-1 |
| chr2_3 | exon | 6989327 | 6989367 | 6989327 | ID=Msa0275070-mRNA-1:exon:3293;Parent=Msa0275070-mRNA-1 |
| chr2_3 | five_prime_UTR | 6987430 | 6987898 | 6987430 | ID=Msa0275070-mRNA-1:five_prime_utr;Parent=Msa0275070-mRNA-1 |
| chr2_3 | CDS | 6987899 | 6987928 | 6987899 | ID=Msa0275070-mRNA-1:cds;Parent=Msa0275070-mRNA-1 |
| chr2_3 | CDS | 6988146 | 6988221 | 6988146 | ID=Msa0275070-mRNA-1:cds;Parent=Msa0275070-mRNA-1 |
| chr2_3 | CDS | 6988810 | 6989046 | 6988810 | ID=Msa0275070-mRNA-1:cds;Parent=Msa0275070-mRNA-1 |
| chr2_3 | CDS | 6989327 | 6989367 | 6989327 | ID=Msa0275070-mRNA-1:cds;Parent=Msa0275070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
