Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0196190 | XP_013462736.1 | 93.874 | 506 | 15 | 7 | 1 | 502 | 1 | 494 | 0.0 | 883 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0196190 | sp|Q9M8K5|HIP32_ARATH | 50.558 | 269 | 99 | 8 | 1 | 250 | 1 | 254 | 8.24e-45 | 167 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0196190 | A0A072V529 | 93.874 | 506 | 15 | 7 | 1 | 502 | 1 | 494 | 0.0 | 883 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012940 | Msa0196190 | 0.821126 | 4.765759e-53 | -8.615850e-47 |
| Msa0032020 | Msa0196190 | 0.815482 | 9.037794e-52 | -8.615850e-47 |
| Msa0032920 | Msa0196190 | -0.802662 | 5.043492e-49 | -8.615850e-47 |
| Msa0052610 | Msa0196190 | 0.811068 | 8.423586e-51 | -8.615850e-47 |
| Msa0057610 | Msa0196190 | 0.800605 | 1.332383e-48 | -8.615850e-47 |
| Msa0081520 | Msa0196190 | 0.827472 | 1.535507e-54 | -8.615850e-47 |
| Msa0093850 | Msa0196190 | 0.836697 | 8.041174e-57 | -8.615850e-47 |
| Msa0098470 | Msa0196190 | 0.807948 | 3.938646e-50 | -8.615850e-47 |
| Msa0137610 | Msa0196190 | -0.800148 | 1.650939e-48 | -8.615850e-47 |
| Msa0138360 | Msa0196190 | 0.817020 | 4.094844e-52 | -8.615850e-47 |
| Msa0147980 | Msa0196190 | 0.803666 | 3.126692e-49 | -8.615850e-47 |
| Msa0173890 | Msa0196190 | 0.830067 | 3.619043e-55 | -8.615850e-47 |
| Msa0178120 | Msa0196190 | 0.803831 | 2.889558e-49 | -8.615850e-47 |
| Msa0188690 | Msa0196190 | 0.849270 | 3.602036e-60 | -8.615850e-47 |
| Msa0196190 | Msa0206840 | 0.811678 | 6.208375e-51 | -8.615850e-47 |
| Msa0196190 | Msa0209140 | 0.816394 | 5.656428e-52 | -8.615850e-47 |
| Msa0196190 | Msa0238090 | 0.901870 | 1.728782e-78 | -8.615850e-47 |
| Msa0196190 | Msa0241830 | 0.824084 | 9.774411e-54 | -8.615850e-47 |
| Msa0196190 | Msa0249540 | 0.836933 | 6.999085e-57 | -8.615850e-47 |
| Msa0196190 | Msa0270210 | 0.841812 | 3.785413e-58 | -8.615850e-47 |
| Msa0196190 | Msa0275070 | 0.834436 | 3.001434e-56 | -8.615850e-47 |
| Msa0196190 | Msa0275080 | 0.876016 | 1.951521e-68 | -8.615850e-47 |
| Msa0196190 | Msa0296250 | 0.854109 | 1.532310e-61 | -8.615850e-47 |
| Msa0196190 | Msa0307270 | 0.814956 | 1.183136e-51 | -8.615850e-47 |
| Msa0196190 | Msa0307850 | 0.844818 | 5.974674e-59 | -8.615850e-47 |
| Msa0196190 | Msa0315980 | 0.921080 | 5.655480e-88 | -8.615850e-47 |
| Msa0196190 | Msa0322900 | 0.815467 | 9.108284e-52 | -8.615850e-47 |
| Msa0196190 | Msa0332640 | 0.844782 | 6.106916e-59 | -8.615850e-47 |
| Msa0196190 | Msa0341690 | 0.811957 | 5.398716e-51 | -8.615850e-47 |
| Msa0196190 | Msa0375640 | 0.836078 | 1.155524e-56 | -8.615850e-47 |
| Msa0196190 | Msa0424160 | 0.841605 | 4.294825e-58 | -8.615850e-47 |
| Msa0196190 | Msa0435370 | 0.829817 | 4.162290e-55 | -8.615850e-47 |
| Msa0196190 | Msa0435420 | 0.835894 | 1.286138e-56 | -8.615850e-47 |
| Msa0196190 | Msa0435570 | 0.814500 | 1.492949e-51 | -8.615850e-47 |
| Msa0196190 | Msa0443390 | 0.802278 | 6.052715e-49 | -8.615850e-47 |
| Msa0196190 | Msa0515800 | 0.843232 | 1.589820e-58 | -8.615850e-47 |
| Msa0196190 | Msa0518030 | 0.819951 | 8.869496e-53 | -8.615850e-47 |
| Msa0196190 | Msa0519760 | 0.824297 | 8.711490e-54 | -8.615850e-47 |
| Msa0196190 | Msa0519810 | 0.811458 | 6.930866e-51 | -8.615850e-47 |
| Msa0196190 | Msa0519840 | 0.827651 | 1.390694e-54 | -8.615850e-47 |
| Msa0196190 | Msa0527020 | 0.816066 | 6.695603e-52 | -8.615850e-47 |
| Msa0196190 | Msa0527190 | 0.800952 | 1.132234e-48 | -8.615850e-47 |
| Msa0196190 | Msa0534750 | 0.830159 | 3.436474e-55 | -8.615850e-47 |
| Msa0196190 | Msa0623910 | 0.802609 | 5.172441e-49 | -8.615850e-47 |
| Msa0196190 | Msa0638480 | 0.802551 | 5.316036e-49 | -8.615850e-47 |
| Msa0196190 | Msa0669520 | 0.819184 | 1.327167e-52 | -8.615850e-47 |
| Msa0196190 | Msa0681260 | 0.807243 | 5.560237e-50 | -8.615850e-47 |
| Msa0196190 | Msa0681280 | 0.813202 | 2.883386e-51 | -8.615850e-47 |
| Msa0196190 | Msa0693330 | 0.820212 | 7.726363e-53 | -8.615850e-47 |
| Msa0196190 | Msa0695270 | 0.815851 | 7.478052e-52 | -8.615850e-47 |
| Msa0196190 | Msa0706760 | 0.807413 | 5.117310e-50 | -8.615850e-47 |
| Msa0196190 | Msa0713970 | 0.828067 | 1.104803e-54 | -8.615850e-47 |
| Msa0196190 | Msa0719400 | 0.817890 | 2.607279e-52 | -8.615850e-47 |
| Msa0196190 | Msa0726090 | 0.817875 | 2.628080e-52 | -8.615850e-47 |
| Msa0196190 | Msa0788770 | 0.841593 | 4.325365e-58 | -8.615850e-47 |
| Msa0196190 | Msa0789650 | 0.821393 | 4.134408e-53 | -8.615850e-47 |
| Msa0196190 | Msa0790400 | 0.843085 | 1.740882e-58 | -8.615850e-47 |
| Msa0196190 | Msa0815630 | 0.810729 | 9.974782e-51 | -8.615850e-47 |
| Msa0196190 | Msa0819420 | 0.811050 | 8.498065e-51 | -8.615850e-47 |
| Msa0196190 | Msa0846240 | 0.818958 | 1.493664e-52 | -8.615850e-47 |
| Msa0196190 | Msa0856050 | 0.839327 | 1.693654e-57 | -8.615850e-47 |
| Msa0196190 | Msa0872670 | 0.809595 | 1.750619e-50 | -8.615850e-47 |
| Msa0196190 | Msa0945190 | 0.809734 | 1.634542e-50 | -8.615850e-47 |
| Msa0196190 | Msa1005820 | 0.808444 | 3.087902e-50 | -8.615850e-47 |
| Msa0196190 | Msa1127590 | 0.843085 | 1.740882e-58 | -8.615850e-47 |
| Msa0196190 | Msa1131560 | 0.807681 | 4.488620e-50 | -8.615850e-47 |
| Msa0196190 | Msa1160920 | 0.803571 | 3.272235e-49 | -8.615850e-47 |
| Msa0196190 | Msa1174530 | 0.822812 | 1.938642e-53 | -8.615850e-47 |
| Msa0196190 | Msa1174840 | 0.820604 | 6.281730e-53 | -8.615850e-47 |
| Msa0196190 | Msa1216360 | 0.815114 | 1.091326e-51 | -8.615850e-47 |
| Msa0196190 | Msa1235250 | 0.816095 | 6.596592e-52 | -8.615850e-47 |
| Msa0196190 | Msa1258710 | 0.813094 | 3.045939e-51 | -8.615850e-47 |
| Msa0196190 | Msa1263010 | 0.823752 | 1.169565e-53 | -8.615850e-47 |
| Msa0196190 | Msa1333560 | 0.850596 | 1.532983e-60 | -8.615850e-47 |
| Msa0196190 | Msa1356830 | 0.801902 | 7.231448e-49 | -8.615850e-47 |
| Msa0196190 | Msa1363260 | 0.802084 | 6.635241e-49 | -8.615850e-47 |
| Msa0196190 | Msa1369150 | 0.806948 | 6.419196e-50 | -8.615850e-47 |
| Msa0196190 | Msa1371520 | 0.811913 | 5.519413e-51 | -8.615850e-47 |
| Msa0196190 | Msa1373820 | 0.812114 | 4.988563e-51 | -8.615850e-47 |
| Msa0196190 | Msa1403570 | 0.837260 | 5.774681e-57 | -8.615850e-47 |
| Msa0196190 | Msa1411500 | 0.837762 | 4.292526e-57 | -8.615850e-47 |
| Msa0196190 | Msa1412000 | 0.808265 | 3.371058e-50 | -8.615850e-47 |
| Msa0196190 | Msa1418500 | 0.804961 | 1.680374e-49 | -8.615850e-47 |
| Msa0196190 | Msa1427110 | 0.820758 | 5.791260e-53 | -8.615850e-47 |
| Msa0196190 | Msa1437940 | 0.817754 | 2.799389e-52 | -8.615850e-47 |
| Msa0196190 | Msa1443300 | 0.845670 | 3.513224e-59 | -8.615850e-47 |
| Msa0196190 | Msa1443930 | 0.814602 | 1.417326e-51 | -8.615850e-47 |
| Msa0196190 | Msa1449930 | 0.845734 | 3.376050e-59 | -8.615850e-47 |
| Msa0196190 | Msa1459460 | 0.846445 | 2.162731e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0196190 | MtrunA17_Chr2g0287751 | 93.874 | 506 | 15 | 7 | 1 | 502 | 1 | 494 | 0.0 | 883 |
| Msa0196190 | MtrunA17_Chr2g0287741 | 71.630 | 497 | 109 | 9 | 10 | 502 | 15 | 483 | 4.81e-131 | 391 |
| Msa0196190 | MtrunA17_Chr0c22g0493881 | 70.833 | 192 | 44 | 6 | 1 | 187 | 1 | 185 | 1.99e-46 | 165 |
| Msa0196190 | MtrunA17_Chr4g0065651 | 70.833 | 192 | 44 | 6 | 1 | 187 | 1 | 185 | 3.04e-46 | 168 |
| Msa0196190 | MtrunA17_Chr4g0065621 | 61.538 | 325 | 86 | 13 | 1 | 302 | 1 | 309 | 8.96e-41 | 150 |
| Msa0196190 | MtrunA17_Chr1g0191671 | 49.490 | 196 | 58 | 5 | 1 | 194 | 1 | 157 | 1.21e-35 | 140 |
| Msa0196190 | MtrunA17_Chr1g0208301 | 70.513 | 78 | 20 | 1 | 1 | 75 | 1 | 78 | 2.55e-30 | 121 |
| Msa0196190 | MtrunA17_Chr7g0269081 | 67.143 | 70 | 23 | 0 | 5 | 74 | 17 | 86 | 9.80e-25 | 104 |
| Msa0196190 | MtrunA17_Chr4g0067291 | 41.935 | 155 | 60 | 5 | 7 | 132 | 71 | 224 | 7.87e-24 | 102 |
| Msa0196190 | MtrunA17_Chr3g0111541 | 53.521 | 71 | 33 | 0 | 3 | 73 | 5 | 75 | 1.68e-19 | 87.0 |
| Msa0196190 | MtrunA17_Chr1g0192131 | 58.667 | 75 | 30 | 1 | 4 | 77 | 9 | 83 | 1.78e-19 | 90.5 |
| Msa0196190 | MtrunA17_Chr7g0272571 | 56.061 | 66 | 29 | 0 | 9 | 74 | 32 | 97 | 7.79e-19 | 88.2 |
| Msa0196190 | MtrunA17_Chr2g0296001 | 58.571 | 70 | 29 | 0 | 5 | 74 | 68 | 137 | 1.07e-16 | 81.6 |
| Msa0196190 | MtrunA17_Chr8g0382721 | 52.459 | 61 | 29 | 0 | 14 | 74 | 33 | 93 | 2.37e-14 | 70.5 |
| Msa0196190 | MtrunA17_Chr3g0124411 | 47.761 | 67 | 35 | 0 | 8 | 74 | 28 | 94 | 2.30e-13 | 67.8 |
| Msa0196190 | MtrunA17_Chr1g0160201 | 43.939 | 66 | 37 | 0 | 9 | 74 | 24 | 89 | 1.21e-12 | 65.5 |
| Msa0196190 | MtrunA17_Chr1g0198341 | 43.284 | 67 | 38 | 0 | 10 | 76 | 4 | 70 | 1.40e-12 | 63.2 |
| Msa0196190 | MtrunA17_Chr0c22g0493871 | 53.125 | 128 | 35 | 4 | 388 | 502 | 15 | 130 | 3.75e-12 | 63.5 |
| Msa0196190 | MtrunA17_Chr4g0065611 | 53.125 | 128 | 35 | 4 | 388 | 502 | 27 | 142 | 4.77e-12 | 63.5 |
| Msa0196190 | MtrunA17_Chr5g0407821 | 40.278 | 72 | 43 | 0 | 9 | 80 | 22 | 93 | 7.02e-12 | 63.2 |
| Msa0196190 | MtrunA17_Chr1g0189221 | 38.028 | 71 | 44 | 0 | 7 | 77 | 50 | 120 | 1.01e-11 | 63.5 |
| Msa0196190 | MtrunA17_Chr7g0218981 | 42.647 | 68 | 39 | 0 | 13 | 80 | 7 | 74 | 1.03e-11 | 62.4 |
| Msa0196190 | MtrunA17_Chr2g0325601 | 38.750 | 80 | 47 | 1 | 14 | 91 | 6 | 85 | 1.84e-11 | 62.0 |
| Msa0196190 | MtrunA17_Chr7g0251491 | 43.548 | 62 | 34 | 1 | 14 | 74 | 52 | 113 | 5.59e-11 | 61.2 |
| Msa0196190 | MtrunA17_Chr5g0404641 | 41.538 | 65 | 38 | 0 | 9 | 73 | 2 | 66 | 6.25e-11 | 60.8 |
| Msa0196190 | MtrunA17_Chr4g0036931 | 36.986 | 73 | 45 | 1 | 3 | 74 | 21 | 93 | 8.99e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0196190 | AT3G06130.2 | 50.558 | 269 | 99 | 8 | 1 | 250 | 1 | 254 | 5.93e-47 | 167 |
| Msa0196190 | AT3G06130.1 | 50.558 | 269 | 99 | 8 | 1 | 250 | 1 | 254 | 8.38e-46 | 167 |
| Msa0196190 | AT5G19090.2 | 74.380 | 121 | 24 | 2 | 1 | 114 | 1 | 121 | 1.86e-45 | 166 |
| Msa0196190 | AT5G19090.2 | 47.222 | 144 | 41 | 5 | 391 | 502 | 325 | 465 | 3.93e-13 | 72.0 |
| Msa0196190 | AT5G19090.3 | 74.380 | 121 | 24 | 2 | 1 | 114 | 1 | 121 | 1.86e-45 | 166 |
| Msa0196190 | AT5G19090.3 | 47.222 | 144 | 41 | 5 | 391 | 502 | 325 | 465 | 3.93e-13 | 72.0 |
| Msa0196190 | AT5G19090.5 | 74.380 | 121 | 24 | 2 | 1 | 114 | 1 | 121 | 1.15e-44 | 166 |
| Msa0196190 | AT5G19090.4 | 74.380 | 121 | 24 | 2 | 1 | 114 | 1 | 121 | 1.15e-44 | 166 |
| Msa0196190 | AT5G19090.1 | 74.380 | 121 | 24 | 2 | 1 | 114 | 1 | 121 | 1.15e-44 | 166 |
| Msa0196190 | AT5G27690.1 | 60.241 | 83 | 33 | 0 | 5 | 87 | 25 | 107 | 2.02e-27 | 113 |
| Msa0196190 | AT3G05220.1 | 62.162 | 74 | 28 | 0 | 1 | 74 | 1 | 74 | 5.12e-26 | 112 |
| Msa0196190 | AT1G23000.1 | 60.256 | 78 | 28 | 1 | 1 | 75 | 1 | 78 | 3.77e-24 | 103 |
| Msa0196190 | AT1G23000.2 | 60.256 | 78 | 28 | 1 | 1 | 75 | 61 | 138 | 9.78e-24 | 103 |
| Msa0196190 | AT5G37860.1 | 58.462 | 65 | 27 | 0 | 9 | 73 | 9 | 73 | 1.11e-19 | 89.4 |
| Msa0196190 | AT1G56210.1 | 60.317 | 63 | 25 | 0 | 10 | 72 | 40 | 102 | 1.47e-17 | 84.7 |
| Msa0196190 | AT1G06330.1 | 48.438 | 64 | 33 | 0 | 14 | 77 | 6 | 69 | 6.22e-14 | 69.7 |
| Msa0196190 | AT1G66240.1 | 40.299 | 67 | 40 | 0 | 10 | 76 | 33 | 99 | 3.78e-12 | 63.2 |
| Msa0196190 | AT3G56891.1 | 42.188 | 64 | 37 | 0 | 14 | 77 | 20 | 83 | 5.40e-11 | 61.6 |
| Msa0196190 | AT1G71050.1 | 39.394 | 66 | 40 | 0 | 9 | 74 | 27 | 92 | 7.77e-11 | 60.8 |
Find 189 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGGGAAGGTGACCGTTTC+TGG | 0.126298 | 2_1:-13265185 | Msa0196190:CDS |
| CACCACCCTTTGGCTGATTT+TGG | 0.127985 | 2_1:+13264964 | None:intergenic |
| AGCTTCTTGATGAGAATATT+TGG | 0.155111 | 2_1:+13265152 | None:intergenic |
| CTTCAAAATATTAAAGGATT+TGG | 0.214990 | 2_1:-13264876 | Msa0196190:CDS |
| GAACAACTTCAAAATATTAA+AGG | 0.221872 | 2_1:-13264882 | Msa0196190:CDS |
| TTTCCACCCATCATCATTTC+AGG | 0.251317 | 2_1:+13264060 | None:intergenic |
| GGTGGTGGCGGTGGCGGTGG+CGG | 0.291922 | 2_1:-13264486 | Msa0196190:CDS |
| ATCAAGAAGCTTGCAAAATC+AGG | 0.297726 | 2_1:-13265140 | Msa0196190:CDS |
| TTTGATTTGCAATGTTGTTC+TGG | 0.302117 | 2_1:+13265066 | None:intergenic |
| GGTGGCGGTGGCGGTGGCGG+TGG | 0.312454 | 2_1:-13264483 | Msa0196190:CDS |
| CCTTGTTGGCCACCACCCTT+TGG | 0.315827 | 2_1:+13264954 | None:intergenic |
| CCTGTGCCTGTTCAAGTTCA+TGG | 0.322029 | 2_1:-13264543 | Msa0196190:CDS |
| CATGGCTTGGGTGGTGGAAA+TGG | 0.328082 | 2_1:-13264525 | Msa0196190:CDS |
| AGGGAAACATGCAGAACTTT+GGG | 0.332545 | 2_1:-13265120 | Msa0196190:CDS |
| TCTATAGTAATTTAAAGTTC+AGG | 0.341064 | 2_1:+13263676 | None:intergenic |
| ATGTATTGTTGTTGTTGGTA+TGG | 0.358729 | 2_1:+13264036 | None:intergenic |
| GGTGGAGGAGGGTAGCTATA+AGG | 0.359634 | 2_1:+13263904 | None:intergenic |
| TTATTGTTGTTGTTTGCCTT+TGG | 0.363526 | 2_1:+13265092 | None:intergenic |
| CCCATTGCTCCTCCTCCCAT+TGG | 0.369706 | 2_1:+13264198 | None:intergenic |
| GTTGGTGGAGGTGGTGGTAA+TGG | 0.372485 | 2_1:-13264366 | Msa0196190:CDS |
| GGATGACCACCACCCATGTT+TGG | 0.385549 | 2_1:+13264261 | None:intergenic |
| GCCTGTTCAAGTTCATGGCT+TGG | 0.385983 | 2_1:-13264538 | Msa0196190:CDS |
| GCTTCTTGATGAGAATATTT+GGG | 0.388512 | 2_1:+13265153 | None:intergenic |
| AAAATCTTGCAGAAGATTGA+TGG | 0.391119 | 2_1:-13265850 | Msa0196190:intron |
| AAAGGTGGTGGCGGTGGCGG+TGG | 0.391438 | 2_1:-13264489 | Msa0196190:CDS |
| GGCGGTGTCAGTGGTGGATA+TGG | 0.391475 | 2_1:-13264087 | Msa0196190:CDS |
| GCCGGTAGGCCTTGAACAGC+TGG | 0.391650 | 2_1:+13264135 | None:intergenic |
| GGTGGAGGTGGTGGTAATGG+TGG | 0.396018 | 2_1:-13264363 | Msa0196190:CDS |
| CAGGGAAACATGCAGAACTT+TGG | 0.405425 | 2_1:-13265121 | Msa0196190:CDS |
| AAGAAAGGTGGTGGCGGTGG+CGG | 0.406323 | 2_1:-13264492 | Msa0196190:CDS |
| GTTCAAGGTATGATGAATAA+TGG | 0.407885 | 2_1:-13264288 | Msa0196190:CDS |
| GGTGGTGGCGGCAGTGGTGG+AGG | 0.409161 | 2_1:-13264567 | Msa0196190:CDS |
| CCTCCCATTTGACTCATCAT+TGG | 0.414296 | 2_1:+13264165 | None:intergenic |
| CGGCCATGTATTGTTGTTGT+TGG | 0.415164 | 2_1:+13264031 | None:intergenic |
| AAGAAAGGTGGTGGCGGCAG+TGG | 0.415819 | 2_1:-13264573 | Msa0196190:CDS |
| GAAACCATGTGGCCCACATT+AGG | 0.418420 | 2_1:+13264240 | None:intergenic |
| CATGATGATGAATGCTCAAA+AGG | 0.426250 | 2_1:-13264622 | Msa0196190:CDS |
| CCAAAGGGTGGTGGCCAACA+AGG | 0.428615 | 2_1:-13264954 | Msa0196190:CDS |
| CCCAAGCCATGAACTTGAAC+AGG | 0.428896 | 2_1:+13264537 | None:intergenic |
| TGTATTGTTGTTGTTGGTAT+GGG | 0.429195 | 2_1:+13264037 | None:intergenic |
| AAAGGTGGTGGCGGCAGTGG+TGG | 0.433138 | 2_1:-13264570 | Msa0196190:CDS |
| TCTGAAGGTGCCTCAATTCA+AGG | 0.437147 | 2_1:-13264850 | Msa0196190:CDS |
| CCTGTTCAAGTTCATGGCTT+GGG | 0.438192 | 2_1:-13264537 | Msa0196190:CDS |
| CTCATTTCTTTCAAAACTCA+AGG | 0.440002 | 2_1:-13263526 | Msa0196190:three_prime_UTR |
| ATGGCTTGGGTGGTGGAAAT+GGG | 0.442661 | 2_1:-13264524 | Msa0196190:CDS |
| GAATAAGATGAAACTACCTA+TGG | 0.442921 | 2_1:-13264664 | Msa0196190:CDS |
| GGTGGTCTTGCATAAATCAT+TGG | 0.446862 | 2_1:+13263955 | None:intergenic |
| GGAAAGAAAGGTGGTGGCGG+TGG | 0.448783 | 2_1:-13264495 | Msa0196190:CDS |
| ATGGGAGAAAGTGGTGTTCA+AGG | 0.452988 | 2_1:-13264303 | Msa0196190:CDS |
| AACAAGGGGCAAAAGGGTCC+TGG | 0.452988 | 2_1:-13264993 | Msa0196190:CDS |
| GAAGAAATGAGATGATGAAT+TGG | 0.455801 | 2_1:-13263813 | Msa0196190:three_prime_UTR |
| GCTCAAAAGGGTGTTGGAAA+TGG | 0.456364 | 2_1:-13264609 | Msa0196190:CDS |
| ATCAAAGGGTTCTAACAAAG+AGG | 0.460794 | 2_1:+13266181 | None:intergenic |
| GTGGGATTCCAAATAACAAT+GGG | 0.461498 | 2_1:-13264344 | Msa0196190:CDS |
| AATAAGAATGTTGGTGGAGG+TGG | 0.468863 | 2_1:-13264375 | Msa0196190:CDS |
| TGAGGATGTTGAGGTGGAGG+AGG | 0.468950 | 2_1:+13263892 | None:intergenic |
| GCGATGAACGGCGGTGGAGG+AGG | 0.468951 | 2_1:-13264108 | Msa0196190:CDS |
| AGTGAGAAGATGAACAGAAA+GGG | 0.469058 | 2_1:+13266437 | None:intergenic |
| GTGGAGGTGGTGGTAATGGT+GGG | 0.469948 | 2_1:-13264362 | Msa0196190:CDS |
| GTTGGAAATGGCGGAGGCAA+TGG | 0.471383 | 2_1:-13264597 | Msa0196190:CDS |
| ATGTTCATGTCCTTGAATTG+AGG | 0.472918 | 2_1:+13264840 | None:intergenic |
| ATGCAAATTGACAATGGAAA+AGG | 0.473035 | 2_1:-13265035 | Msa0196190:CDS |
| CATGCCAATGATGAGTCAAA+TGG | 0.477210 | 2_1:-13264169 | Msa0196190:CDS |
| GCTGCGATGAACGGCGGTGG+AGG | 0.477384 | 2_1:-13264111 | Msa0196190:CDS |
| GGGTGGTGGTCATCCTAATG+TGG | 0.482164 | 2_1:-13264253 | Msa0196190:CDS |
| GGAGGAGGCGGTGTCAGTGG+TGG | 0.483447 | 2_1:-13264093 | Msa0196190:CDS |
| GGTAACATGCCAGCTGTTCA+AGG | 0.483877 | 2_1:-13264144 | Msa0196190:CDS |
| ATGAACGGCGGTGGAGGAGG+CGG | 0.489060 | 2_1:-13264105 | Msa0196190:CDS |
| TCAACAACAGTTACAACAGC+TGG | 0.491026 | 2_1:-13264904 | Msa0196190:CDS |
| AATCTATCATTTCCACCAGC+TGG | 0.494927 | 2_1:+13263982 | None:intergenic |
| CAAGTTCATGGCTTGGGTGG+TGG | 0.495665 | 2_1:-13264531 | Msa0196190:CDS |
| TGGGTCCACATTTCCAGAAA+CGG | 0.497187 | 2_1:+13265172 | None:intergenic |
| GCCAGCTGTTCAAGGCCTAC+CGG | 0.501295 | 2_1:-13264136 | Msa0196190:CDS |
| CCAATGGGAGGAGGAGCAAT+GGG | 0.508430 | 2_1:-13264198 | Msa0196190:CDS |
| GCAATGGGAGAAAAGAAAGA+AGG | 0.508873 | 2_1:+13266307 | None:intergenic |
| GACAATGGAAAAGGTGGTGG+AGG | 0.511844 | 2_1:-13265026 | Msa0196190:CDS |
| GATTTATGCAAGACCACCAA+TGG | 0.513574 | 2_1:-13263950 | Msa0196190:CDS |
| GGTAGTTTCATCTTATTCAA+AGG | 0.515445 | 2_1:+13264669 | None:intergenic |
| GCAGCTGCGATGAACGGCGG+TGG | 0.515631 | 2_1:-13264114 | Msa0196190:CDS |
| AATGGGAATGGAGGAAAGAA+AGG | 0.515830 | 2_1:-13264507 | Msa0196190:CDS |
| TGAAGCTGTTGTTGTTGTTG+AGG | 0.516492 | 2_1:+13264924 | None:intergenic |
| AATGGAAATAAGAATGTTGG+TGG | 0.516597 | 2_1:-13264381 | Msa0196190:CDS |
| CGCAATGATGAATCAACAAA+GGG | 0.517484 | 2_1:-13264010 | Msa0196190:CDS |
| CCGCCGTTCATCGCAGCTGC+CGG | 0.518191 | 2_1:+13264117 | None:intergenic |
| AAGAATGTTGGTGGAGGTGG+TGG | 0.518247 | 2_1:-13264372 | Msa0196190:CDS |
| TCATGAGGATGTTGAGGTGG+AGG | 0.521423 | 2_1:+13263889 | None:intergenic |
| ATGCCAATGATGAGTCAAAT+GGG | 0.525603 | 2_1:-13264168 | Msa0196190:CDS |
| CTACCGGCAGCTGCGATGAA+CGG | 0.526265 | 2_1:-13264120 | Msa0196190:CDS |
| GGCGGAGGCAATGGAAAGAA+AGG | 0.528122 | 2_1:-13264588 | Msa0196190:CDS |
| ATGAATGCTCAAAAGGGTGT+TGG | 0.528773 | 2_1:-13264615 | Msa0196190:CDS |
| CAACAAAGGGCAATACCAGC+TGG | 0.531880 | 2_1:-13263997 | Msa0196190:CDS |
| AGATGATGAATTGGTGATGC+TGG | 0.533354 | 2_1:-13263804 | Msa0196190:three_prime_UTR |
| GGAGGAAAGAAAGGTGGTGG+CGG | 0.534225 | 2_1:-13264498 | Msa0196190:CDS |
| CAATGGGAGAAAAGAAAGAA+GGG | 0.534511 | 2_1:+13266308 | None:intergenic |
| AAAGAGGGAGAAATGTAGAA+AGG | 0.536287 | 2_1:+13266197 | None:intergenic |
| GAGGATGTTGAGGTGGAGGA+GGG | 0.536746 | 2_1:+13263893 | None:intergenic |
| GTAAATGGGATGGGAGAAAG+TGG | 0.537153 | 2_1:-13264312 | Msa0196190:CDS |
| CGTTCATCGCAGCTGCCGGT+AGG | 0.538577 | 2_1:+13264121 | None:intergenic |
| CAATATGAGTGGTATGCCAA+TGG | 0.539022 | 2_1:-13264214 | Msa0196190:CDS |
| GGTGGAGGAGGCGGTGTCAG+TGG | 0.540462 | 2_1:-13264096 | Msa0196190:CDS |
| GCCAATGGGAGGAGGAGCAA+TGG | 0.540634 | 2_1:-13264199 | Msa0196190:CDS |
| AATAAGATGAAACTACCTAT+GGG | 0.540693 | 2_1:-13264663 | Msa0196190:CDS |
| TAGTGAGAAGATGAACAGAA+AGG | 0.543002 | 2_1:+13266436 | None:intergenic |
| TGGTGGTCCTGAAATGATGA+TGG | 0.543773 | 2_1:-13264067 | Msa0196190:CDS |
| AGAACTTTGGGGTGCTCCAA+AGG | 0.546283 | 2_1:-13265108 | Msa0196190:CDS |
| TCATCCTAATGTGGGCCACA+TGG | 0.547730 | 2_1:-13264244 | Msa0196190:CDS |
| TACATGTAATTAACACCCAT+TGG | 0.549609 | 2_1:+13263934 | None:intergenic |
| GGGGTGTGAAGAAGAAGGCT+TGG | 0.550165 | 2_1:+13266349 | None:intergenic |
| GCATTCATCATCATGTGAGC+AGG | 0.550437 | 2_1:+13264630 | None:intergenic |
| TAAAGGATTTGGAGATCTGA+AGG | 0.551549 | 2_1:-13264865 | Msa0196190:CDS |
| TCAAGAAGCTTGCAAAATCA+GGG | 0.551852 | 2_1:-13265139 | Msa0196190:CDS |
| GTGAGAAGATGAACAGAAAG+GGG | 0.552020 | 2_1:+13266438 | None:intergenic |
| CTCATCATCAAACTCCTCAT+CGG | 0.556584 | 2_1:+13264701 | None:intergenic |
| AATATGAGTGGTATGCCAAT+GGG | 0.560994 | 2_1:-13264213 | Msa0196190:CDS |
| TCAAAGGGTTCTAACAAAGA+GGG | 0.561418 | 2_1:+13266182 | None:intergenic |
| GGAGGAGGGTAGCTATAAGG+TGG | 0.562656 | 2_1:+13263907 | None:intergenic |
| CAAAATCAGCCAAAGGGTGG+TGG | 0.564957 | 2_1:-13264963 | Msa0196190:CDS |
| ATTGACAATGGAAAAGGTGG+TGG | 0.565333 | 2_1:-13265029 | Msa0196190:CDS |
| TTGGGTGGTGGAAATGGGAA+TGG | 0.566802 | 2_1:-13264519 | Msa0196190:CDS |
| GGTGGTGGTCATCCTAATGT+GGG | 0.574953 | 2_1:-13264252 | Msa0196190:CDS |
| AGTGGTATGCCAATGGGAGG+AGG | 0.574960 | 2_1:-13264207 | Msa0196190:CDS |
| GGCAATGGAAAGAAAGGTGG+TGG | 0.576650 | 2_1:-13264582 | Msa0196190:CDS |
| GGAGGGTAGCTATAAGGTGG+AGG | 0.576999 | 2_1:+13263910 | None:intergenic |
| AATGGAGGAAAGAAAGGTGG+TGG | 0.577240 | 2_1:-13264501 | Msa0196190:CDS |
| AATAATCAGAGTCAGAATCA+AGG | 0.578254 | 2_1:-13264459 | Msa0196190:CDS |
| AGGGTGTGTGAATATAAGCA+AGG | 0.579993 | 2_1:+13266327 | None:intergenic |
| ATTTATGCAAGACCACCAAT+GGG | 0.585459 | 2_1:-13263949 | Msa0196190:CDS |
| AAGAACATGCAAATTGACAA+TGG | 0.586548 | 2_1:-13265041 | Msa0196190:CDS |
| GGGTGTGTGAATATAAGCAA+GGG | 0.587286 | 2_1:+13266328 | None:intergenic |
| TAAGATGAAACTACCTATGG+GGG | 0.588463 | 2_1:-13264661 | Msa0196190:CDS |
| ATACCAACAACAACAATACA+TGG | 0.592297 | 2_1:-13264034 | Msa0196190:CDS |
| CCATGAACTTGAACAGGCAC+AGG | 0.594078 | 2_1:+13264543 | None:intergenic |
| AATAACCAAAATCAGCCAAA+GGG | 0.594678 | 2_1:-13264969 | Msa0196190:CDS |
| AAGGGTGTTGGAAATGGCGG+AGG | 0.594852 | 2_1:-13264603 | Msa0196190:CDS |
| CAGAGTCAGAATCAAGGTGG+AGG | 0.601904 | 2_1:-13264453 | Msa0196190:CDS |
| CCGCAATGATGAATCAACAA+AGG | 0.602271 | 2_1:-13264011 | Msa0196190:CDS |
| GGTGACCGTTTCTGGAAATG+TGG | 0.604667 | 2_1:-13265177 | Msa0196190:CDS |
| GAAAGGTTGAGAACATAACT+AGG | 0.604718 | 2_1:+13266214 | None:intergenic |
| GTTCAAGTTCATGGCTTGGG+TGG | 0.606576 | 2_1:-13264534 | Msa0196190:CDS |
| GGACTTCCAAACATGGGTGG+TGG | 0.608332 | 2_1:-13264267 | Msa0196190:CDS |
| AGAGAAAGATGAGAAATGTG+AGG | 0.610284 | 2_1:+13266410 | None:intergenic |
| GAATAATGGACTTCCAAACA+TGG | 0.610386 | 2_1:-13264274 | Msa0196190:CDS |
| ACTGAGATAGATGCTGAACA+AGG | 0.610845 | 2_1:-13265203 | Msa0196190:CDS |
| GGTGGTGGAAATGGGAATGG+AGG | 0.610911 | 2_1:-13264516 | Msa0196190:CDS |
| TGAGGAGTTTGATGATGAGA+TGG | 0.610932 | 2_1:-13264697 | Msa0196190:CDS |
| GGATCATGAGGATGTTGAGG+TGG | 0.614525 | 2_1:+13263886 | None:intergenic |
| ATGTAATTAACACCCATTGG+TGG | 0.615835 | 2_1:+13263937 | None:intergenic |
| GGTGTCAGTGGTGGATATGG+TGG | 0.616024 | 2_1:-13264084 | Msa0196190:CDS |
| CAAAGGGTGGTGGCCAACAA+GGG | 0.616059 | 2_1:-13264953 | Msa0196190:CDS |
| AAGTTGGAGTATGGATCATG+AGG | 0.616779 | 2_1:+13263874 | None:intergenic |
| ATGATGATGAATGCTCAAAA+GGG | 0.619348 | 2_1:-13264621 | Msa0196190:CDS |
| TATGGATCATGAGGATGTTG+AGG | 0.622370 | 2_1:+13263883 | None:intergenic |
| CCTTTGTTGATTCATCATTG+CGG | 0.622636 | 2_1:+13264011 | None:intergenic |
| AATCAAAATACAAACACGAA+AGG | 0.624431 | 2_1:-13264801 | Msa0196190:CDS |
| CAAAGGGCAATACCAGCTGG+TGG | 0.624465 | 2_1:-13263994 | Msa0196190:CDS |
| AATGGAAAGAAAGGTGGTGG+CGG | 0.625102 | 2_1:-13264579 | Msa0196190:CDS |
| GATAGATGCTGAACAAGGGA+AGG | 0.625794 | 2_1:-13265198 | Msa0196190:CDS |
| AAATAACCAAAATCAGCCAA+AGG | 0.628590 | 2_1:-13264970 | Msa0196190:CDS |
| CAAAAGGGTGTTGGAAATGG+CGG | 0.630177 | 2_1:-13264606 | Msa0196190:CDS |
| CCGGCAGCTGCGATGAACGG+CGG | 0.637137 | 2_1:-13264117 | Msa0196190:CDS |
| GGGAATGGAGGAAAGAAAGG+TGG | 0.637548 | 2_1:-13264504 | Msa0196190:CDS |
| AACCAAAATCAGCCAAAGGG+TGG | 0.639926 | 2_1:-13264966 | Msa0196190:CDS |
| ATGGTTTCTAACAATATGAG+TGG | 0.640339 | 2_1:-13264225 | Msa0196190:CDS |
| GGGAAACATGCAGAACTTTG+GGG | 0.640585 | 2_1:-13265119 | Msa0196190:CDS |
| GGAAATAAGAATGTTGGTGG+AGG | 0.644361 | 2_1:-13264378 | Msa0196190:CDS |
| ATAAGATGAAACTACCTATG+GGG | 0.647445 | 2_1:-13264662 | Msa0196190:CDS |
| CAAATTGACAATGGAAAAGG+TGG | 0.648543 | 2_1:-13265032 | Msa0196190:CDS |
| AAATGGAGGTGGAATGCCGG+AGG | 0.650010 | 2_1:-13264409 | Msa0196190:CDS |
| CTGAGATAGATGCTGAACAA+GGG | 0.650734 | 2_1:-13265202 | Msa0196190:CDS |
| GGTGGGATTCCAAATAACAA+TGG | 0.655401 | 2_1:-13264345 | Msa0196190:CDS |
| AATAATGGACTTCCAAACAT+GGG | 0.656303 | 2_1:-13264273 | Msa0196190:CDS |
| GGTGGAGGTAATAAGAACAA+TGG | 0.658879 | 2_1:-13264438 | Msa0196190:CDS |
| AATGGAGGTGGAATGCCGGA+GGG | 0.666899 | 2_1:-13264408 | Msa0196190:CDS |
| ATGAGTGGTATGCCAATGGG+AGG | 0.670599 | 2_1:-13264210 | Msa0196190:CDS |
| GGTGTGTGAATATAAGCAAG+GGG | 0.670704 | 2_1:+13266329 | None:intergenic |
| GGAGGTAATAAGAACAATGG+TGG | 0.674022 | 2_1:-13264435 | Msa0196190:CDS |
| GGGATTCCAAATAACAATGG+GGG | 0.674410 | 2_1:-13264342 | Msa0196190:CDS |
| AAAGTGAACATACACTGTGA+CGG | 0.675992 | 2_1:-13265892 | Msa0196190:CDS |
| GGTGGTCCTGAAATGATGAT+GGG | 0.676791 | 2_1:-13264066 | Msa0196190:CDS |
| GGTCCTGAAATGATGATGGG+TGG | 0.683123 | 2_1:-13264063 | Msa0196190:CDS |
| AATCAGAGTCAGAATCAAGG+TGG | 0.685165 | 2_1:-13264456 | Msa0196190:CDS |
| AATGGACTTCCAAACATGGG+TGG | 0.695955 | 2_1:-13264270 | Msa0196190:CDS |
| GGAGGCAATGGAAAGAAAGG+TGG | 0.701098 | 2_1:-13264585 | Msa0196190:CDS |
| AAGATGAAACTACCTATGGG+GGG | 0.701851 | 2_1:-13264660 | Msa0196190:CDS |
| TCATATTGTTAGAAACCATG+TGG | 0.713472 | 2_1:+13264229 | None:intergenic |
| GTGTGTGAATATAAGCAAGG+GGG | 0.725063 | 2_1:+13266330 | None:intergenic |
| TGGGATTCCAAATAACAATG+GGG | 0.736086 | 2_1:-13264343 | Msa0196190:CDS |
| CCAATGATGAGTCAAATGGG+AGG | 0.737345 | 2_1:-13264165 | Msa0196190:CDS |
| TGATGATGAGTATTCCGATG+AGG | 0.755531 | 2_1:-13264715 | Msa0196190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTAAAAGAAAAAAATG+GGG | - | chr2_1:13266406-13266425 | Msa0196190:five_prime_UTR | 10.0% |
| !!! | ATATTTAGTTTTATAGATGA+AGG | + | chr2_1:13263717-13263736 | None:intergenic | 15.0% |
| !!! | CTCATTTTTTTTTTATCAAA+GGG | + | chr2_1:13263826-13263845 | None:intergenic | 15.0% |
| !!! | ACTCATTTTTTTTTTATCAA+AGG | + | chr2_1:13263827-13263846 | None:intergenic | 15.0% |
| !!! | ATTGTGTAATTTAATTTTGT+AGG | - | chr2_1:13264754-13264773 | Msa0196190:CDS | 15.0% |
| !!! | TTGTGTAATTTAATTTTGTA+GGG | - | chr2_1:13264755-13264774 | Msa0196190:CDS | 15.0% |
| !!! | TTTTTAACTTTCAAAAAACT+TGG | + | chr2_1:13266293-13266312 | None:intergenic | 15.0% |
| !! | AATTTAAAAGAAAAAAATGG+GGG | - | chr2_1:13266407-13266426 | Msa0196190:five_prime_UTR | 15.0% |
| !! | TTGACATTTCTAATAAAGTA+AGG | - | chr2_1:13263995-13264014 | Msa0196190:CDS | 20.0% |
| !!! | TCATGAGTATTTTTTTTCAT+GGG | + | chr2_1:13264469-13264488 | None:intergenic | 20.0% |
| !!! | TTCATGAGTATTTTTTTTCA+TGG | + | chr2_1:13264470-13264489 | None:intergenic | 20.0% |
| !!! | AGGTATATACATATTTTTCT+TGG | + | chr2_1:13264538-13264557 | None:intergenic | 20.0% |
| !!! | ATCATTTAAGATATAACAAG+TGG | + | chr2_1:13264689-13264708 | None:intergenic | 20.0% |
| !!! | TGTGTAATTTAATTTTGTAG+GGG | - | chr2_1:13264756-13264775 | Msa0196190:CDS | 20.0% |
| !! | GAACAACTTCAAAATATTAA+AGG | - | chr2_1:13265108-13265127 | Msa0196190:CDS | 20.0% |
| !! | CTTCAAAATATTAAAGGATT+TGG | - | chr2_1:13265114-13265133 | Msa0196190:CDS | 20.0% |
| !! | AAAAATGGAAATAAGAATGT+TGG | - | chr2_1:13265606-13265625 | Msa0196190:intron | 20.0% |
| !! | AAAAAACTTGGATGAAAAAA+AGG | + | chr2_1:13266281-13266300 | None:intergenic | 20.0% |
| !!! | TCTATAGTAATTTAAAGTTC+AGG | + | chr2_1:13266317-13266336 | None:intergenic | 20.0% |
| !!! | AGTTTTATAGATGAAGGTTT+TGG | + | chr2_1:13263711-13263730 | None:intergenic | 25.0% |
| !!! | AAACTCTTTTTTTAGCAAGT+TGG | + | chr2_1:13264191-13264210 | None:intergenic | 25.0% |
| ! | GACTAAGAATATGAATGAAA+AGG | + | chr2_1:13264221-13264240 | None:intergenic | 25.0% |
| !! | ACTTTTCTTTGATCTGTTAT+TGG | - | chr2_1:13264405-13264424 | Msa0196190:CDS | 25.0% |
| ! | GTATCAATATGAATGAAATG+AGG | + | chr2_1:13264558-13264577 | None:intergenic | 25.0% |
| !! | CAAGAGTACAAAGTAAAATA+TGG | + | chr2_1:13264609-13264628 | None:intergenic | 25.0% |
| !! | ATTTAAGATATAACAAGTGG+TGG | + | chr2_1:13264686-13264705 | None:intergenic | 25.0% |
| !!! | TTCGTGTTTGTATTTTGATT+TGG | + | chr2_1:13265189-13265208 | None:intergenic | 25.0% |
| ! | AATCAAAATACAAACACGAA+AGG | - | chr2_1:13265189-13265208 | Msa0196190:CDS | 25.0% |
| ! | AATAAGATGAAACTACCTAT+GGG | - | chr2_1:13265327-13265346 | Msa0196190:intron | 25.0% |
| !! | AGAAGAGATTTTGAAGATAC+AGG | - | chr2_1:13263849-13263868 | Msa0196190:CDS | 30.0% |
| ! | GTAACACTAATTCTTGCTTT+TGG | - | chr2_1:13264039-13264058 | Msa0196190:CDS | 30.0% |
| !!! | CTAATTCTTGCTTTTGGTTT+TGG | - | chr2_1:13264045-13264064 | Msa0196190:CDS | 30.0% |
| AAAATCTTGCAGAAGATTGA+TGG | - | chr2_1:13264140-13264159 | Msa0196190:CDS | 30.0% | |
| ! | ACATATTTTTCTTGGTCGAA+TGG | + | chr2_1:13264530-13264549 | None:intergenic | 30.0% |
| GCTTCTTGATGAGAATATTT+GGG | + | chr2_1:13264840-13264859 | None:intergenic | 30.0% | |
| AGCTTCTTGATGAGAATATT+TGG | + | chr2_1:13264841-13264860 | None:intergenic | 30.0% | |
| !! | TTATTGTTGTTGTTTGCCTT+TGG | + | chr2_1:13264901-13264920 | None:intergenic | 30.0% |
| !! | TTTGATTTGCAATGTTGTTC+TGG | + | chr2_1:13264927-13264946 | None:intergenic | 30.0% |
| AAGAACATGCAAATTGACAA+TGG | - | chr2_1:13264949-13264968 | Msa0196190:CDS | 30.0% | |
| ATGCAAATTGACAATGGAAA+AGG | - | chr2_1:13264955-13264974 | Msa0196190:CDS | 30.0% | |
| AAATAACCAAAATCAGCCAA+AGG | - | chr2_1:13265020-13265039 | Msa0196190:CDS | 30.0% | |
| AATAACCAAAATCAGCCAAA+GGG | - | chr2_1:13265021-13265040 | Msa0196190:CDS | 30.0% | |
| !!! | TTTGTATTTTGATTTGGTGG+TGG | + | chr2_1:13265183-13265202 | None:intergenic | 30.0% |
| !!! | GTGTTTGTATTTTGATTTGG+TGG | + | chr2_1:13265186-13265205 | None:intergenic | 30.0% |
| GAAAAATCATCATACTCTTC+AGG | + | chr2_1:13265231-13265250 | None:intergenic | 30.0% | |
| !! | TGATTTTTCTGATGATGAGT+TGG | - | chr2_1:13265242-13265261 | Msa0196190:intron | 30.0% |
| GGTAGTTTCATCTTATTCAA+AGG | + | chr2_1:13265324-13265343 | None:intergenic | 30.0% | |
| GAATAAGATGAAACTACCTA+TGG | - | chr2_1:13265326-13265345 | Msa0196190:intron | 30.0% | |
| ATAAGATGAAACTACCTATG+GGG | - | chr2_1:13265328-13265347 | Msa0196190:intron | 30.0% | |
| ! | ATGATGATGAATGCTCAAAA+GGG | - | chr2_1:13265369-13265388 | Msa0196190:intron | 30.0% |
| AATAATCAGAGTCAGAATCA+AGG | - | chr2_1:13265531-13265550 | Msa0196190:intron | 30.0% | |
| !! | TTATTTCCATTTTTACCCTC+CGG | + | chr2_1:13265600-13265619 | None:intergenic | 30.0% |
| AATGGAAATAAGAATGTTGG+TGG | - | chr2_1:13265609-13265628 | Msa0196190:intron | 30.0% | |
| !! | TTTTTACCCCCATTGTTATT+TGG | + | chr2_1:13265657-13265676 | None:intergenic | 30.0% |
| AAATAACAATGGGGGTAAAA+AGG | - | chr2_1:13265656-13265675 | Msa0196190:intron | 30.0% | |
| GTTCAAGGTATGATGAATAA+TGG | - | chr2_1:13265702-13265721 | Msa0196190:intron | 30.0% | |
| !! | AATAATGGACTTCCAAACAT+GGG | - | chr2_1:13265717-13265736 | Msa0196190:intron | 30.0% |
| TCATATTGTTAGAAACCATG+TGG | + | chr2_1:13265764-13265783 | None:intergenic | 30.0% | |
| ATGGTTTCTAACAATATGAG+TGG | - | chr2_1:13265765-13265784 | Msa0196190:intron | 30.0% | |
| ! | TGTATTGTTGTTGTTGGTAT+GGG | + | chr2_1:13265956-13265975 | None:intergenic | 30.0% |
| ! | ATGTATTGTTGTTGTTGGTA+TGG | + | chr2_1:13265957-13265976 | None:intergenic | 30.0% |
| ATACCAACAACAACAATACA+TGG | - | chr2_1:13265956-13265975 | Msa0196190:intron | 30.0% | |
| TACATGTAATTAACACCCAT+TGG | + | chr2_1:13266059-13266078 | None:intergenic | 30.0% | |
| ! | ATTTTCGTCGTTGAAAAAGT+TGG | + | chr2_1:13266135-13266154 | None:intergenic | 30.0% |
| GAAGAAATGAGATGATGAAT+TGG | - | chr2_1:13266177-13266196 | Msa0196190:five_prime_UTR | 30.0% | |
| CTCATTTCTTTCAAAACTCA+AGG | - | chr2_1:13266464-13266483 | Msa0196190:five_prime_UTR | 30.0% | |
| AGTGAGAAGATGAACAGAAA+GGG | + | chr2_1:13263556-13263575 | None:intergenic | 35.0% | |
| TAGTGAGAAGATGAACAGAA+AGG | + | chr2_1:13263557-13263576 | None:intergenic | 35.0% | |
| AGAGAAAGATGAGAAATGTG+AGG | + | chr2_1:13263583-13263602 | None:intergenic | 35.0% | |
| GAGTTAGAGAGAAAAATGGT+GGG | + | chr2_1:13263622-13263641 | None:intergenic | 35.0% | |
| CTTGGAGTTAGAGAGAAAAA+TGG | + | chr2_1:13263626-13263645 | None:intergenic | 35.0% | |
| CAATGGGAGAAAAGAAAGAA+GGG | + | chr2_1:13263685-13263704 | None:intergenic | 35.0% | |
| !!! | ATGAAGGTTTTGGAAGCAAT+GGG | + | chr2_1:13263701-13263720 | None:intergenic | 35.0% |
| GAAAGGTTGAGAACATAACT+AGG | + | chr2_1:13263779-13263798 | None:intergenic | 35.0% | |
| AAAGAGGGAGAAATGTAGAA+AGG | + | chr2_1:13263796-13263815 | None:intergenic | 35.0% | |
| ! | TCAAAGGGTTCTAACAAAGA+GGG | + | chr2_1:13263811-13263830 | None:intergenic | 35.0% |
| ! | ATCAAAGGGTTCTAACAAAG+AGG | + | chr2_1:13263812-13263831 | None:intergenic | 35.0% |
| AAAGTGAACATACACTGTGA+CGG | - | chr2_1:13264098-13264117 | Msa0196190:CDS | 35.0% | |
| AAGTTGGAAGAGTGAATATG+AGG | + | chr2_1:13264175-13264194 | None:intergenic | 35.0% | |
| CAAACTGTGACGATATGAAT+TGG | + | chr2_1:13264352-13264371 | None:intergenic | 35.0% | |
| TACAAACAGTAGTGAGAGAA+TGG | + | chr2_1:13264377-13264396 | None:intergenic | 35.0% | |
| ! | TATTGGTAACAGTGAGCATA+TGG | - | chr2_1:13264422-13264441 | Msa0196190:CDS | 35.0% |
| ATCAAGAAGCTTGCAAAATC+AGG | - | chr2_1:13264850-13264869 | Msa0196190:CDS | 35.0% | |
| TCAAGAAGCTTGCAAAATCA+GGG | - | chr2_1:13264851-13264870 | Msa0196190:CDS | 35.0% | |
| CAAATTGACAATGGAAAAGG+TGG | - | chr2_1:13264958-13264977 | Msa0196190:CDS | 35.0% | |
| TGGAGGAAACAAAAACAACA+AGG | - | chr2_1:13264981-13265000 | Msa0196190:CDS | 35.0% | |
| GGAGGAAACAAAAACAACAA+GGG | - | chr2_1:13264982-13265001 | Msa0196190:CDS | 35.0% | |
| GAGGAAACAAAAACAACAAG+GGG | - | chr2_1:13264983-13265002 | Msa0196190:CDS | 35.0% | |
| AAAAACAACAAGGGGCAAAA+GGG | - | chr2_1:13264991-13265010 | Msa0196190:CDS | 35.0% | |
| TAAAGGATTTGGAGATCTGA+AGG | - | chr2_1:13265125-13265144 | Msa0196190:CDS | 35.0% | |
| ATGTTCATGTCCTTGAATTG+AGG | + | chr2_1:13265153-13265172 | None:intergenic | 35.0% | |
| TAAGATGAAACTACCTATGG+GGG | - | chr2_1:13265329-13265348 | Msa0196190:intron | 35.0% | |
| ! | CATGATGATGAATGCTCAAA+AGG | - | chr2_1:13265368-13265387 | Msa0196190:intron | 35.0% |
| AAGAACAATGGTGGCAAAAA+TGG | - | chr2_1:13265564-13265583 | Msa0196190:intron | 35.0% | |
| GTGGGATTCCAAATAACAAT+GGG | - | chr2_1:13265646-13265665 | Msa0196190:intron | 35.0% | |
| TGGGATTCCAAATAACAATG+GGG | - | chr2_1:13265647-13265666 | Msa0196190:intron | 35.0% | |
| AATGGGGGTAAAAAGGTAAA+TGG | - | chr2_1:13265663-13265682 | Msa0196190:intron | 35.0% | |
| ATGGGGGTAAAAAGGTAAAT+GGG | - | chr2_1:13265664-13265683 | Msa0196190:intron | 35.0% | |
| GGTAAAAAGGTAAATGGGAT+GGG | - | chr2_1:13265669-13265688 | Msa0196190:intron | 35.0% | |
| !! | GAATAATGGACTTCCAAACA+TGG | - | chr2_1:13265716-13265735 | Msa0196190:intron | 35.0% |
| AATATGAGTGGTATGCCAAT+GGG | - | chr2_1:13265777-13265796 | Msa0196190:intron | 35.0% | |
| ATGCCAATGATGAGTCAAAT+GGG | - | chr2_1:13265822-13265841 | Msa0196190:intron | 35.0% | |
| !! | CCTTTGTTGATTCATCATTG+CGG | + | chr2_1:13265982-13266001 | None:intergenic | 35.0% |
| CGCAATGATGAATCAACAAA+GGG | - | chr2_1:13265980-13265999 | Msa0196190:intron | 35.0% | |
| ATTTATGCAAGACCACCAAT+GGG | - | chr2_1:13266041-13266060 | Msa0196190:intron | 35.0% | |
| ATGTAATTAACACCCATTGG+TGG | + | chr2_1:13266056-13266075 | None:intergenic | 35.0% | |
| TCGTTGAAAAAGTTGGAGTA+TGG | + | chr2_1:13266128-13266147 | None:intergenic | 35.0% | |
| AAGAAAAAAATGGGGGAGAA+TGG | - | chr2_1:13266414-13266433 | Msa0196190:five_prime_UTR | 35.0% | |
| AGAAAAAAATGGGGGAGAAT+GGG | - | chr2_1:13266415-13266434 | Msa0196190:five_prime_UTR | 35.0% | |
| GTGAGAAGATGAACAGAAAG+GGG | + | chr2_1:13263555-13263574 | None:intergenic | 40.0% | |
| GGAGTTAGAGAGAAAAATGG+TGG | + | chr2_1:13263623-13263642 | None:intergenic | 40.0% | |
| GTGTGTGAATATAAGCAAGG+GGG | + | chr2_1:13263663-13263682 | None:intergenic | 40.0% | |
| GGTGTGTGAATATAAGCAAG+GGG | + | chr2_1:13263664-13263683 | None:intergenic | 40.0% | |
| GGGTGTGTGAATATAAGCAA+GGG | + | chr2_1:13263665-13263684 | None:intergenic | 40.0% | |
| AGGGTGTGTGAATATAAGCA+AGG | + | chr2_1:13263666-13263685 | None:intergenic | 40.0% | |
| GCAATGGGAGAAAAGAAAGA+AGG | + | chr2_1:13263686-13263705 | None:intergenic | 40.0% | |
| !!! | GATGAAGGTTTTGGAAGCAA+TGG | + | chr2_1:13263702-13263721 | None:intergenic | 40.0% |
| TGTGACGATATGAATTGGCA+AGG | + | chr2_1:13264347-13264366 | None:intergenic | 40.0% | |
| ACTGAGATAGATGCTGAACA+AGG | - | chr2_1:13264787-13264806 | Msa0196190:CDS | 40.0% | |
| CTGAGATAGATGCTGAACAA+GGG | - | chr2_1:13264788-13264807 | Msa0196190:CDS | 40.0% | |
| AGGGAAACATGCAGAACTTT+GGG | - | chr2_1:13264870-13264889 | Msa0196190:CDS | 40.0% | |
| ATTGACAATGGAAAAGGTGG+TGG | - | chr2_1:13264961-13264980 | Msa0196190:CDS | 40.0% | |
| CAAAAACAACAAGGGGCAAA+AGG | - | chr2_1:13264990-13265009 | Msa0196190:CDS | 40.0% | |
| !!! | GGCTGATTTTGGTTATTTCC+AGG | + | chr2_1:13265018-13265037 | None:intergenic | 40.0% |
| ! | TGAAGCTGTTGTTGTTGTTG+AGG | + | chr2_1:13265069-13265088 | None:intergenic | 40.0% |
| TCAACAACAGTTACAACAGC+TGG | - | chr2_1:13265086-13265105 | Msa0196190:CDS | 40.0% | |
| ! | TGATGATGAGTATTCCGATG+AGG | - | chr2_1:13265275-13265294 | Msa0196190:intron | 40.0% |
| CTCATCATCAAACTCCTCAT+CGG | + | chr2_1:13265292-13265311 | None:intergenic | 40.0% | |
| !! | TGAGGAGTTTGATGATGAGA+TGG | - | chr2_1:13265293-13265312 | Msa0196190:intron | 40.0% |
| AAGATGAAACTACCTATGGG+GGG | - | chr2_1:13265330-13265349 | Msa0196190:intron | 40.0% | |
| ! | ATGAATGCTCAAAAGGGTGT+TGG | - | chr2_1:13265375-13265394 | Msa0196190:intron | 40.0% |
| AATGGGAATGGAGGAAAGAA+AGG | - | chr2_1:13265483-13265502 | Msa0196190:intron | 40.0% | |
| AATCAGAGTCAGAATCAAGG+TGG | - | chr2_1:13265534-13265553 | Msa0196190:intron | 40.0% | |
| GGTGGAGGTAATAAGAACAA+TGG | - | chr2_1:13265552-13265571 | Msa0196190:intron | 40.0% | |
| GGAGGTAATAAGAACAATGG+TGG | - | chr2_1:13265555-13265574 | Msa0196190:intron | 40.0% | |
| AACAATGGTGGCAAAAATGG+AGG | - | chr2_1:13265567-13265586 | Msa0196190:intron | 40.0% | |
| ! | GGAAATAAGAATGTTGGTGG+AGG | - | chr2_1:13265612-13265631 | Msa0196190:intron | 40.0% |
| ! | AATAAGAATGTTGGTGGAGG+TGG | - | chr2_1:13265615-13265634 | Msa0196190:intron | 40.0% |
| GGTGGGATTCCAAATAACAA+TGG | - | chr2_1:13265645-13265664 | Msa0196190:intron | 40.0% | |
| GGGATTCCAAATAACAATGG+GGG | - | chr2_1:13265648-13265667 | Msa0196190:intron | 40.0% | |
| GGGTAAAAAGGTAAATGGGA+TGG | - | chr2_1:13265668-13265687 | Msa0196190:intron | 40.0% | |
| CAATATGAGTGGTATGCCAA+TGG | - | chr2_1:13265776-13265795 | Msa0196190:intron | 40.0% | |
| CATGCCAATGATGAGTCAAA+TGG | - | chr2_1:13265821-13265840 | Msa0196190:intron | 40.0% | |
| TTTCCACCCATCATCATTTC+AGG | + | chr2_1:13265933-13265952 | None:intergenic | 40.0% | |
| CCGCAATGATGAATCAACAA+AGG | - | chr2_1:13265979-13265998 | Msa0196190:intron | 40.0% | |
| AATCTATCATTTCCACCAGC+TGG | + | chr2_1:13266011-13266030 | None:intergenic | 40.0% | |
| ! | GGTGGTCTTGCATAAATCAT+TGG | + | chr2_1:13266038-13266057 | None:intergenic | 40.0% |
| GATTTATGCAAGACCACCAA+TGG | - | chr2_1:13266040-13266059 | Msa0196190:intron | 40.0% | |
| TATGGATCATGAGGATGTTG+AGG | + | chr2_1:13266110-13266129 | None:intergenic | 40.0% | |
| AAGTTGGAGTATGGATCATG+AGG | + | chr2_1:13266119-13266138 | None:intergenic | 40.0% | |
| !! | AGATGATGAATTGGTGATGC+TGG | - | chr2_1:13266186-13266205 | Msa0196190:five_prime_UTR | 40.0% |
| GAAAAAAATGGGGGAGAATG+GGG | - | chr2_1:13266416-13266435 | Msa0196190:five_prime_UTR | 40.0% | |
| TGCAGAGTAGAAAAGTCAGG+TGG | + | chr2_1:13264324-13264343 | None:intergenic | 45.0% | |
| AGGTGCAGAGTAGAAAAGTC+AGG | + | chr2_1:13264327-13264346 | None:intergenic | 45.0% | |
| GATAGATGCTGAACAAGGGA+AGG | - | chr2_1:13264792-13264811 | Msa0196190:CDS | 45.0% | |
| TGGGTCCACATTTCCAGAAA+CGG | + | chr2_1:13264821-13264840 | None:intergenic | 45.0% | |
| CAGGGAAACATGCAGAACTT+TGG | - | chr2_1:13264869-13264888 | Msa0196190:CDS | 45.0% | |
| GGGAAACATGCAGAACTTTG+GGG | - | chr2_1:13264871-13264890 | Msa0196190:CDS | 45.0% | |
| AACCAAAATCAGCCAAAGGG+TGG | - | chr2_1:13265024-13265043 | Msa0196190:CDS | 45.0% | |
| ! | GTTGAGGATTTTGCCCTTGT+TGG | + | chr2_1:13265053-13265072 | None:intergenic | 45.0% |
| !! | TCTGAAGGTGCCTCAATTCA+AGG | - | chr2_1:13265140-13265159 | Msa0196190:CDS | 45.0% |
| AAACTACCTATGGGGGGTAA+TGG | - | chr2_1:13265336-13265355 | Msa0196190:intron | 45.0% | |
| GCATTCATCATCATGTGAGC+AGG | + | chr2_1:13265363-13265382 | None:intergenic | 45.0% | |
| !! | GCTCAAAAGGGTGTTGGAAA+TGG | - | chr2_1:13265381-13265400 | Msa0196190:intron | 45.0% |
| !! | CAAAAGGGTGTTGGAAATGG+CGG | - | chr2_1:13265384-13265403 | Msa0196190:intron | 45.0% |
| ! | AATGGAAAGAAAGGTGGTGG+CGG | - | chr2_1:13265411-13265430 | Msa0196190:intron | 45.0% |
| ! | CCTGTTCAAGTTCATGGCTT+GGG | - | chr2_1:13265453-13265472 | Msa0196190:intron | 45.0% |
| AATGGAGGAAAGAAAGGTGG+TGG | - | chr2_1:13265489-13265508 | Msa0196190:intron | 45.0% | |
| AATGGTGGCAAAAATGGAGG+TGG | - | chr2_1:13265570-13265589 | Msa0196190:intron | 45.0% | |
| CAAAAATGGAGGTGGAATGC+CGG | - | chr2_1:13265578-13265597 | Msa0196190:intron | 45.0% | |
| GTAAATGGGATGGGAGAAAG+TGG | - | chr2_1:13265678-13265697 | Msa0196190:intron | 45.0% | |
| ATGGGAGAAAGTGGTGTTCA+AGG | - | chr2_1:13265687-13265706 | Msa0196190:intron | 45.0% | |
| ! | AATGGACTTCCAAACATGGG+TGG | - | chr2_1:13265720-13265739 | Msa0196190:intron | 45.0% |
| CCTCCCATTTGACTCATCAT+TGG | + | chr2_1:13265828-13265847 | None:intergenic | 45.0% | |
| CCAATGATGAGTCAAATGGG+AGG | - | chr2_1:13265825-13265844 | Msa0196190:intron | 45.0% | |
| TGGTGGTCCTGAAATGATGA+TGG | - | chr2_1:13265923-13265942 | Msa0196190:intron | 45.0% | |
| GGTGGTCCTGAAATGATGAT+GGG | - | chr2_1:13265924-13265943 | Msa0196190:intron | 45.0% | |
| ! | CGGCCATGTATTGTTGTTGT+TGG | + | chr2_1:13265962-13265981 | None:intergenic | 45.0% |
| !! | TAAAATTTAAAAGAAAAAAA+TGG | - | chr2_1:13266404-13266423 | Msa0196190:five_prime_UTR | 5.0% |
| !! | AAAATTTAAAAGAAAAAAAT+GGG | - | chr2_1:13266405-13266424 | Msa0196190:five_prime_UTR | 5.0% |
| GAGAGAGAGAGAGAGAGAGA+TGG | + | chr2_1:13263512-13263531 | None:intergenic | 50.0% | |
| ! | GGTGACCGTTTCTGGAAATG+TGG | - | chr2_1:13264813-13264832 | Msa0196190:CDS | 50.0% |
| !! | AGAACTTTGGGGTGCTCCAA+AGG | - | chr2_1:13264882-13264901 | Msa0196190:CDS | 50.0% |
| ! | GACAATGGAAAAGGTGGTGG+AGG | - | chr2_1:13264964-13264983 | Msa0196190:CDS | 50.0% |
| !! | CACCACCCTTTGGCTGATTT+TGG | + | chr2_1:13265029-13265048 | None:intergenic | 50.0% |
| CAAAATCAGCCAAAGGGTGG+TGG | - | chr2_1:13265027-13265046 | Msa0196190:CDS | 50.0% | |
| GGAGGCAATGGAAAGAAAGG+TGG | - | chr2_1:13265405-13265424 | Msa0196190:intron | 50.0% | |
| GGCAATGGAAAGAAAGGTGG+TGG | - | chr2_1:13265408-13265427 | Msa0196190:intron | 50.0% | |
| CCATGAACTTGAACAGGCAC+AGG | + | chr2_1:13265450-13265469 | None:intergenic | 50.0% | |
| ! | CCTGTGCCTGTTCAAGTTCA+TGG | - | chr2_1:13265447-13265466 | Msa0196190:intron | 50.0% |
| ! | GCCTGTTCAAGTTCATGGCT+TGG | - | chr2_1:13265452-13265471 | Msa0196190:intron | 50.0% |
| CCCAAGCCATGAACTTGAAC+AGG | + | chr2_1:13265456-13265475 | None:intergenic | 50.0% | |
| ! | GTTCAAGTTCATGGCTTGGG+TGG | - | chr2_1:13265456-13265475 | Msa0196190:intron | 50.0% |
| !! | ATGGCTTGGGTGGTGGAAAT+GGG | - | chr2_1:13265466-13265485 | Msa0196190:intron | 50.0% |
| !! | TTGGGTGGTGGAAATGGGAA+TGG | - | chr2_1:13265471-13265490 | Msa0196190:intron | 50.0% |
| GGGAATGGAGGAAAGAAAGG+TGG | - | chr2_1:13265486-13265505 | Msa0196190:intron | 50.0% | |
| CAGAGTCAGAATCAAGGTGG+AGG | - | chr2_1:13265537-13265556 | Msa0196190:intron | 50.0% | |
| GGAATGCCGGAGGGTAAAAA+TGG | - | chr2_1:13265591-13265610 | Msa0196190:intron | 50.0% | |
| ! | AAGAATGTTGGTGGAGGTGG+TGG | - | chr2_1:13265618-13265637 | Msa0196190:intron | 50.0% |
| ! | GGTGGTGGTCATCCTAATGT+GGG | - | chr2_1:13265738-13265757 | Msa0196190:intron | 50.0% |
| TCATCCTAATGTGGGCCACA+TGG | - | chr2_1:13265746-13265765 | Msa0196190:intron | 50.0% | |
| GAAACCATGTGGCCCACATT+AGG | + | chr2_1:13265753-13265772 | None:intergenic | 50.0% | |
| ATGAGTGGTATGCCAATGGG+AGG | - | chr2_1:13265780-13265799 | Msa0196190:intron | 50.0% | |
| GGTAACATGCCAGCTGTTCA+AGG | - | chr2_1:13265846-13265865 | Msa0196190:intron | 50.0% | |
| !! | GGTCCTGAAATGATGATGGG+TGG | - | chr2_1:13265927-13265946 | Msa0196190:intron | 50.0% |
| CAACAAAGGGCAATACCAGC+TGG | - | chr2_1:13265993-13266012 | Msa0196190:intron | 50.0% | |
| TCATGAGGATGTTGAGGTGG+AGG | + | chr2_1:13266104-13266123 | None:intergenic | 50.0% | |
| GGATCATGAGGATGTTGAGG+TGG | + | chr2_1:13266107-13266126 | None:intergenic | 50.0% | |
| GGGGTGTGAAGAAGAAGGCT+TGG | + | chr2_1:13263644-13263663 | None:intergenic | 55.0% | |
| ! | GCAAGGGGGTGTGAAGAAGA+AGG | + | chr2_1:13263649-13263668 | None:intergenic | 55.0% |
| CAAGGGAAGGTGACCGTTTC+TGG | - | chr2_1:13264805-13264824 | Msa0196190:CDS | 55.0% | |
| AACAAGGGGCAAAAGGGTCC+TGG | - | chr2_1:13264997-13265016 | Msa0196190:CDS | 55.0% | |
| ! | CAAAGGGTGGTGGCCAACAA+GGG | - | chr2_1:13265037-13265056 | Msa0196190:CDS | 55.0% |
| !! | AAGGGTGTTGGAAATGGCGG+AGG | - | chr2_1:13265387-13265406 | Msa0196190:intron | 55.0% |
| ! | GTTGGAAATGGCGGAGGCAA+TGG | - | chr2_1:13265393-13265412 | Msa0196190:intron | 55.0% |
| GGCGGAGGCAATGGAAAGAA+AGG | - | chr2_1:13265402-13265421 | Msa0196190:intron | 55.0% | |
| ! | CAAGTTCATGGCTTGGGTGG+TGG | - | chr2_1:13265459-13265478 | Msa0196190:intron | 55.0% |
| !! | CATGGCTTGGGTGGTGGAAA+TGG | - | chr2_1:13265465-13265484 | Msa0196190:intron | 55.0% |
| !! | GGTGGTGGAAATGGGAATGG+AGG | - | chr2_1:13265474-13265493 | Msa0196190:intron | 55.0% |
| ! | GGAGGAAAGAAAGGTGGTGG+CGG | - | chr2_1:13265492-13265511 | Msa0196190:intron | 55.0% |
| AAATGGAGGTGGAATGCCGG+AGG | - | chr2_1:13265581-13265600 | Msa0196190:intron | 55.0% | |
| AATGGAGGTGGAATGCCGGA+GGG | - | chr2_1:13265582-13265601 | Msa0196190:intron | 55.0% | |
| ! | GTTGGTGGAGGTGGTGGTAA+TGG | - | chr2_1:13265624-13265643 | Msa0196190:intron | 55.0% |
| !! | GTGGAGGTGGTGGTAATGGT+GGG | - | chr2_1:13265628-13265647 | Msa0196190:intron | 55.0% |
| GGACTTCCAAACATGGGTGG+TGG | - | chr2_1:13265723-13265742 | Msa0196190:intron | 55.0% | |
| GGATGACCACCACCCATGTT+TGG | + | chr2_1:13265732-13265751 | None:intergenic | 55.0% | |
| ! | GGGTGGTGGTCATCCTAATG+TGG | - | chr2_1:13265737-13265756 | Msa0196190:intron | 55.0% |
| AGTGGTATGCCAATGGGAGG+AGG | - | chr2_1:13265783-13265802 | Msa0196190:intron | 55.0% | |
| CCAATGGGAGGAGGAGCAAT+GGG | - | chr2_1:13265792-13265811 | Msa0196190:intron | 55.0% | |
| !! | GGTGTCAGTGGTGGATATGG+TGG | - | chr2_1:13265906-13265925 | Msa0196190:CDS | 55.0% |
| CAAAGGGCAATACCAGCTGG+TGG | - | chr2_1:13265996-13266015 | Msa0196190:intron | 55.0% | |
| GGAGGGTAGCTATAAGGTGG+AGG | + | chr2_1:13266083-13266102 | None:intergenic | 55.0% | |
| GGAGGAGGGTAGCTATAAGG+TGG | + | chr2_1:13266086-13266105 | None:intergenic | 55.0% | |
| GGTGGAGGAGGGTAGCTATA+AGG | + | chr2_1:13266089-13266108 | None:intergenic | 55.0% | |
| GAGGATGTTGAGGTGGAGGA+GGG | + | chr2_1:13266100-13266119 | None:intergenic | 55.0% | |
| TGAGGATGTTGAGGTGGAGG+AGG | + | chr2_1:13266101-13266120 | None:intergenic | 55.0% | |
| CCTTGTTGGCCACCACCCTT+TGG | + | chr2_1:13265039-13265058 | None:intergenic | 60.0% | |
| ! | CCAAAGGGTGGTGGCCAACA+AGG | - | chr2_1:13265036-13265055 | Msa0196190:CDS | 60.0% |
| GCAGGACCATTACCCCCCAT+AGG | + | chr2_1:13265345-13265364 | None:intergenic | 60.0% | |
| !! | AAGAAAGGTGGTGGCGGCAG+TGG | - | chr2_1:13265417-13265436 | Msa0196190:intron | 60.0% |
| !! | GGAAAGAAAGGTGGTGGCGG+TGG | - | chr2_1:13265414-13265433 | Msa0196190:intron | 60.0% |
| !! | AAGAAAGGTGGTGGCGGTGG+CGG | - | chr2_1:13265498-13265517 | Msa0196190:intron | 60.0% |
| !! | GGTGGAGGTGGTGGTAATGG+TGG | - | chr2_1:13265627-13265646 | Msa0196190:intron | 60.0% |
| GCCAATGGGAGGAGGAGCAA+TGG | - | chr2_1:13265791-13265810 | Msa0196190:intron | 60.0% | |
| CCCATTGCTCCTCCTCCCAT+TGG | + | chr2_1:13265795-13265814 | None:intergenic | 60.0% | |
| GCCAGCTGTTCAAGGCCTAC+CGG | - | chr2_1:13265854-13265873 | Msa0196190:CDS | 60.0% | |
| CTACCGGCAGCTGCGATGAA+CGG | - | chr2_1:13265870-13265889 | Msa0196190:CDS | 60.0% | |
| !! | GGCGGTGTCAGTGGTGGATA+TGG | - | chr2_1:13265903-13265922 | Msa0196190:CDS | 60.0% |
| !! | AAAGGTGGTGGCGGCAGTGG+TGG | - | chr2_1:13265420-13265439 | Msa0196190:intron | 65.0% |
| GCCGGTAGGCCTTGAACAGC+TGG | + | chr2_1:13265858-13265877 | None:intergenic | 65.0% | |
| CGTTCATCGCAGCTGCCGGT+AGG | + | chr2_1:13265872-13265891 | None:intergenic | 65.0% | |
| ATGAACGGCGGTGGAGGAGG+CGG | - | chr2_1:13265885-13265904 | Msa0196190:CDS | 65.0% | |
| !! | AAAGGTGGTGGCGGTGGCGG+TGG | - | chr2_1:13265501-13265520 | Msa0196190:intron | 70.0% |
| CCGCCGTTCATCGCAGCTGC+CGG | + | chr2_1:13265876-13265895 | None:intergenic | 70.0% | |
| CCGGCAGCTGCGATGAACGG+CGG | - | chr2_1:13265873-13265892 | Msa0196190:CDS | 70.0% | |
| GCAGCTGCGATGAACGGCGG+TGG | - | chr2_1:13265876-13265895 | Msa0196190:CDS | 70.0% | |
| GCTGCGATGAACGGCGGTGG+AGG | - | chr2_1:13265879-13265898 | Msa0196190:CDS | 70.0% | |
| GCGATGAACGGCGGTGGAGG+AGG | - | chr2_1:13265882-13265901 | Msa0196190:CDS | 70.0% | |
| ! | GGTGGAGGAGGCGGTGTCAG+TGG | - | chr2_1:13265894-13265913 | Msa0196190:CDS | 70.0% |
| ! | GGAGGAGGCGGTGTCAGTGG+TGG | - | chr2_1:13265897-13265916 | Msa0196190:CDS | 70.0% |
| !! | GGTGGTGGCGGCAGTGGTGG+AGG | - | chr2_1:13265423-13265442 | Msa0196190:intron | 75.0% |
| !!! | GGTGGTGGCGGTGGCGGTGG+CGG | - | chr2_1:13265504-13265523 | Msa0196190:intron | 80.0% |
| !! | GGTGGCGGTGGCGGTGGCGG+TGG | - | chr2_1:13265507-13265526 | Msa0196190:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 13263496 | 13266516 | 13263496 | ID=Msa0196190;Name=Msa0196190 |
| chr2_1 | mRNA | 13263496 | 13266516 | 13263496 | ID=Msa0196190-mRNA-1;Parent=Msa0196190;Name=Msa0196190-mRNA-1;_AED=0.21;_eAED=0.21;_QI=345|1|1|1|1|1|3|338|502 |
| chr2_1 | exon | 13263496 | 13265236 | 13263496 | ID=Msa0196190-mRNA-1:exon:5767;Parent=Msa0196190-mRNA-1 |
| chr2_1 | exon | 13265851 | 13265926 | 13265851 | ID=Msa0196190-mRNA-1:exon:5766;Parent=Msa0196190-mRNA-1 |
| chr2_1 | exon | 13266142 | 13266516 | 13266142 | ID=Msa0196190-mRNA-1:exon:5765;Parent=Msa0196190-mRNA-1 |
| chr2_1 | five_prime_UTR | 13266172 | 13266516 | 13266172 | ID=Msa0196190-mRNA-1:five_prime_utr;Parent=Msa0196190-mRNA-1 |
| chr2_1 | CDS | 13266142 | 13266171 | 13266142 | ID=Msa0196190-mRNA-1:cds;Parent=Msa0196190-mRNA-1 |
| chr2_1 | CDS | 13265851 | 13265926 | 13265851 | ID=Msa0196190-mRNA-1:cds;Parent=Msa0196190-mRNA-1 |
| chr2_1 | CDS | 13263834 | 13265236 | 13263834 | ID=Msa0196190-mRNA-1:cds;Parent=Msa0196190-mRNA-1 |
| chr2_1 | three_prime_UTR | 13263496 | 13263833 | 13263496 | ID=Msa0196190-mRNA-1:three_prime_utr;Parent=Msa0196190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
