Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1216110 | XP_013458162.1 | 83.865 | 533 | 52 | 9 | 1 | 520 | 1 | 512 | 3.49e-141 | 427 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1216110 | sp|Q9M8K5|HIP32_ARATH | 51.748 | 286 | 98 | 7 | 1 | 277 | 1 | 255 | 1.39e-44 | 166 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1216110 | A0A072USX2 | 83.865 | 533 | 52 | 9 | 1 | 520 | 1 | 512 | 1.67e-141 | 427 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000560 | Msa1216110 | 0.811859 | 5.669049e-51 | -8.615850e-47 |
Msa0002580 | Msa1216110 | 0.803327 | 3.675010e-49 | -8.615850e-47 |
Msa0005890 | Msa1216110 | 0.819035 | 1.434967e-52 | -8.615850e-47 |
Msa0014770 | Msa1216110 | 0.808294 | 3.324343e-50 | -8.615850e-47 |
Msa0017670 | Msa1216110 | 0.818341 | 2.062181e-52 | -8.615850e-47 |
Msa0018160 | Msa1216110 | 0.837624 | 4.656271e-57 | -8.615850e-47 |
Msa0025160 | Msa1216110 | 0.860778 | 1.628632e-63 | -8.615850e-47 |
Msa0025580 | Msa1216110 | 0.811493 | 6.809938e-51 | -8.615850e-47 |
Msa0032460 | Msa1216110 | 0.863398 | 2.560917e-64 | -8.615850e-47 |
Msa0034210 | Msa1216110 | 0.800444 | 1.436929e-48 | -8.615850e-47 |
Msa0035340 | Msa1216110 | 0.839124 | 1.911073e-57 | -8.615850e-47 |
Msa0035380 | Msa1216110 | 0.810875 | 9.273656e-51 | -8.615850e-47 |
Msa0036870 | Msa1216110 | 0.825392 | 4.807376e-54 | -8.615850e-47 |
Msa0042640 | Msa1216110 | 0.803343 | 3.646786e-49 | -8.615850e-47 |
Msa0050660 | Msa1216110 | 0.828881 | 7.024828e-55 | -8.615850e-47 |
Msa0050700 | Msa1216110 | 0.830551 | 2.755424e-55 | -8.615850e-47 |
Msa0050790 | Msa1216110 | 0.830446 | 2.924065e-55 | -8.615850e-47 |
Msa0052260 | Msa1216110 | 0.805411 | 1.352530e-49 | -8.615850e-47 |
Msa0054690 | Msa1216110 | 0.842954 | 1.885805e-58 | -8.615850e-47 |
Msa0071850 | Msa1216110 | 0.806931 | 6.470936e-50 | -8.615850e-47 |
Msa0071860 | Msa1216110 | 0.821727 | 3.462078e-53 | -8.615850e-47 |
Msa0072520 | Msa1216110 | 0.829371 | 5.343574e-55 | -8.615850e-47 |
Msa0074350 | Msa1216110 | 0.826977 | 2.016865e-54 | -8.615850e-47 |
Msa0074510 | Msa1216110 | 0.831831 | 1.335827e-55 | -8.615850e-47 |
Msa0077340 | Msa1216110 | 0.807818 | 4.198156e-50 | -8.615850e-47 |
Msa0080610 | Msa1216110 | 0.808890 | 2.479204e-50 | -8.615850e-47 |
Msa0087450 | Msa1216110 | 0.806474 | 8.083849e-50 | -8.615850e-47 |
Msa0090400 | Msa1216110 | 0.823352 | 1.450727e-53 | -8.615850e-47 |
Msa0098040 | Msa1216110 | 0.814941 | 1.192212e-51 | -8.615850e-47 |
Msa0108880 | Msa1216110 | 0.802344 | 5.866962e-49 | -8.615850e-47 |
Msa0117480 | Msa1216110 | 0.839722 | 1.336437e-57 | -8.615850e-47 |
Msa0609650 | Msa1216110 | 0.800187 | 1.621313e-48 | -8.615850e-47 |
Msa0611210 | Msa1216110 | 0.820790 | 5.694946e-53 | -8.615850e-47 |
Msa0626450 | Msa1216110 | 0.836124 | 1.124901e-56 | -8.615850e-47 |
Msa0626490 | Msa1216110 | 0.831515 | 1.597820e-55 | -8.615850e-47 |
Msa0644410 | Msa1216110 | 0.809724 | 1.642533e-50 | -8.615850e-47 |
Msa0651550 | Msa1216110 | 0.816967 | 4.207679e-52 | -8.615850e-47 |
Msa0652650 | Msa1216110 | 0.813181 | 2.914439e-51 | -8.615850e-47 |
Msa0652770 | Msa1216110 | 0.823931 | 1.061619e-53 | -8.615850e-47 |
Msa0658640 | Msa1216110 | 0.823281 | 1.507484e-53 | -8.615850e-47 |
Msa0658880 | Msa1216110 | 0.804953 | 1.686778e-49 | -8.615850e-47 |
Msa0661150 | Msa1216110 | 0.836794 | 7.595151e-57 | -8.615850e-47 |
Msa0664600 | Msa1216110 | 0.833649 | 4.723142e-56 | -8.615850e-47 |
Msa0665620 | Msa1216110 | 0.819256 | 1.277883e-52 | -8.615850e-47 |
Msa0675330 | Msa1216110 | 0.815204 | 1.042145e-51 | -8.615850e-47 |
Msa0700460 | Msa1216110 | 0.875825 | 2.269598e-68 | -8.615850e-47 |
Msa0703600 | Msa1216110 | 0.809164 | 2.166539e-50 | -8.615850e-47 |
Msa0706230 | Msa1216110 | 0.801191 | 1.011491e-48 | -8.615850e-47 |
Msa0709200 | Msa1216110 | 0.809452 | 1.878721e-50 | -8.615850e-47 |
Msa0714140 | Msa1216110 | 0.811259 | 7.655850e-51 | -8.615850e-47 |
Msa0735780 | Msa1216110 | 0.823113 | 1.649570e-53 | -8.615850e-47 |
Msa0738700 | Msa1216110 | 0.820840 | 5.546196e-53 | -8.615850e-47 |
Msa0756490 | Msa1216110 | 0.878409 | 2.874832e-69 | -8.615850e-47 |
Msa0757100 | Msa1216110 | 0.803244 | 3.824670e-49 | -8.615850e-47 |
Msa0792370 | Msa1216110 | 0.823497 | 1.341634e-53 | -8.615850e-47 |
Msa0795870 | Msa1216110 | 0.812743 | 3.636239e-51 | -8.615850e-47 |
Msa0829300 | Msa1216110 | 0.863427 | 2.509628e-64 | -8.615850e-47 |
Msa0829330 | Msa1216110 | 0.872489 | 3.057845e-67 | -8.615850e-47 |
Msa0833650 | Msa1216110 | 0.812620 | 3.868480e-51 | -8.615850e-47 |
Msa0835490 | Msa1216110 | 0.849434 | 3.242025e-60 | -8.615850e-47 |
Msa0121330 | Msa1216110 | 0.801042 | 1.085342e-48 | -8.615850e-47 |
Msa0125210 | Msa1216110 | 0.813164 | 2.939760e-51 | -8.615850e-47 |
Msa0125360 | Msa1216110 | 0.816205 | 6.235420e-52 | -8.615850e-47 |
Msa0128310 | Msa1216110 | 0.807764 | 4.310640e-50 | -8.615850e-47 |
Msa0132630 | Msa1216110 | -0.801409 | 9.127617e-49 | -8.615850e-47 |
Msa0136650 | Msa1216110 | 0.845281 | 4.478571e-59 | -8.615850e-47 |
Msa0137880 | Msa1216110 | 0.833586 | 4.899071e-56 | -8.615850e-47 |
Msa0140280 | Msa1216110 | 0.823831 | 1.120829e-53 | -8.615850e-47 |
Msa0146040 | Msa1216110 | 0.812394 | 4.333332e-51 | -8.615850e-47 |
Msa0146650 | Msa1216110 | 0.805199 | 1.498322e-49 | -8.615850e-47 |
Msa0158860 | Msa1216110 | 0.804659 | 1.942246e-49 | -8.615850e-47 |
Msa0161930 | Msa1216110 | 0.834768 | 2.475989e-56 | -8.615850e-47 |
Msa0173290 | Msa1216110 | 0.820249 | 7.579939e-53 | -8.615850e-47 |
Msa0174440 | Msa1216110 | 0.801837 | 7.456471e-49 | -8.615850e-47 |
Msa0174450 | Msa1216110 | 0.814373 | 1.592205e-51 | -8.615850e-47 |
Msa0176060 | Msa1216110 | 0.811203 | 7.873864e-51 | -8.615850e-47 |
Msa0180650 | Msa1216110 | 0.837180 | 6.053139e-57 | -8.615850e-47 |
Msa0185960 | Msa1216110 | 0.821051 | 4.957431e-53 | -8.615850e-47 |
Msa0188610 | Msa1216110 | 0.816754 | 4.697344e-52 | -8.615850e-47 |
Msa0230800 | Msa1216110 | 0.862501 | 4.845843e-64 | -8.615850e-47 |
Msa0230870 | Msa1216110 | 0.827724 | 1.335962e-54 | -8.615850e-47 |
Msa0231200 | Msa1216110 | 0.826858 | 2.154147e-54 | -8.615850e-47 |
Msa0371270 | Msa1216110 | 0.837552 | 4.860860e-57 | -8.615850e-47 |
Msa0380620 | Msa1216110 | 0.847957 | 8.320754e-60 | -8.615850e-47 |
Msa0380670 | Msa1216110 | 0.832892 | 7.293458e-56 | -8.615850e-47 |
Msa0405680 | Msa1216110 | 0.811128 | 8.175247e-51 | -8.615850e-47 |
Msa0415600 | Msa1216110 | 0.818151 | 2.277055e-52 | -8.615850e-47 |
Msa0419540 | Msa1216110 | 0.839742 | 1.321110e-57 | -8.615850e-47 |
Msa0419700 | Msa1216110 | 0.803509 | 3.369466e-49 | -8.615850e-47 |
Msa0424140 | Msa1216110 | 0.810537 | 1.097145e-50 | -8.615850e-47 |
Msa0424160 | Msa1216110 | 0.802819 | 4.680331e-49 | -8.615850e-47 |
Msa0426530 | Msa1216110 | 0.844004 | 9.887204e-59 | -8.615850e-47 |
Msa0430260 | Msa1216110 | 0.845403 | 4.150260e-59 | -8.615850e-47 |
Msa0430300 | Msa1216110 | 0.844606 | 6.812013e-59 | -8.615850e-47 |
Msa0432140 | Msa1216110 | 0.803161 | 3.977917e-49 | -8.615850e-47 |
Msa0435210 | Msa1216110 | 0.823255 | 1.528405e-53 | -8.615850e-47 |
Msa0436910 | Msa1216110 | 0.809228 | 2.099033e-50 | -8.615850e-47 |
Msa0444070 | Msa1216110 | 0.815324 | 9.802493e-52 | -8.615850e-47 |
Msa0453040 | Msa1216110 | 0.833526 | 5.069710e-56 | -8.615850e-47 |
Msa0465530 | Msa1216110 | 0.836076 | 1.156271e-56 | -8.615850e-47 |
Msa0472950 | Msa1216110 | 0.867044 | 1.828183e-65 | -8.615850e-47 |
Msa0474730 | Msa1216110 | 0.802306 | 5.971298e-49 | -8.615850e-47 |
Msa0479320 | Msa1216110 | 0.802498 | 5.452918e-49 | -8.615850e-47 |
Msa0981320 | Msa1216110 | 0.809911 | 1.497233e-50 | -8.615850e-47 |
Msa1003740 | Msa1216110 | 0.821626 | 3.653547e-53 | -8.615850e-47 |
Msa1003800 | Msa1216110 | 0.844680 | 6.506050e-59 | -8.615850e-47 |
Msa1003930 | Msa1216110 | 0.822260 | 2.605262e-53 | -8.615850e-47 |
Msa1009950 | Msa1216110 | 0.803804 | 2.927245e-49 | -8.615850e-47 |
Msa1011530 | Msa1216110 | 0.808930 | 2.430824e-50 | -8.615850e-47 |
Msa1018690 | Msa1216110 | 0.801021 | 1.095668e-48 | -8.615850e-47 |
Msa1020480 | Msa1216110 | 0.819150 | 1.350982e-52 | -8.615850e-47 |
Msa1021590 | Msa1216110 | 0.862111 | 6.386258e-64 | -8.615850e-47 |
Msa1034600 | Msa1216110 | 0.889567 | 2.157225e-73 | -8.615850e-47 |
Msa1040150 | Msa1216110 | 0.818854 | 1.577385e-52 | -8.615850e-47 |
Msa1042160 | Msa1216110 | 0.892259 | 1.872559e-74 | -8.615850e-47 |
Msa1042190 | Msa1216110 | 0.893858 | 4.247762e-75 | -8.615850e-47 |
Msa1044680 | Msa1216110 | 0.880911 | 3.716243e-70 | -8.615850e-47 |
Msa1051900 | Msa1216110 | 0.818122 | 2.310668e-52 | -8.615850e-47 |
Msa1064370 | Msa1216110 | 0.824161 | 9.379024e-54 | -8.615850e-47 |
Msa1072940 | Msa1216110 | 0.809712 | 1.652033e-50 | -8.615850e-47 |
Msa1074370 | Msa1216110 | 0.890131 | 1.300024e-73 | -8.615850e-47 |
Msa1077990 | Msa1216110 | 0.837616 | 4.678515e-57 | -8.615850e-47 |
Msa1078820 | Msa1216110 | 0.821042 | 4.981914e-53 | -8.615850e-47 |
Msa1080000 | Msa1216110 | 0.856861 | 2.415852e-62 | -8.615850e-47 |
Msa1081690 | Msa1216110 | 0.852636 | 4.054820e-61 | -8.615850e-47 |
Msa1096960 | Msa1216110 | 0.839298 | 1.722882e-57 | -8.615850e-47 |
Msa1101290 | Msa1216110 | 0.806592 | 7.633819e-50 | -8.615850e-47 |
Msa1105640 | Msa1216110 | 0.877424 | 6.357403e-69 | -8.615850e-47 |
Msa0244640 | Msa1216110 | 0.800483 | 1.411046e-48 | -8.615850e-47 |
Msa0251620 | Msa1216110 | 0.817343 | 3.463297e-52 | -8.615850e-47 |
Msa0267110 | Msa1216110 | 0.828958 | 6.728625e-55 | -8.615850e-47 |
Msa0270340 | Msa1216110 | 0.829662 | 4.539669e-55 | -8.615850e-47 |
Msa0275070 | Msa1216110 | 0.814559 | 1.448895e-51 | -8.615850e-47 |
Msa0275080 | Msa1216110 | 0.820547 | 6.476186e-53 | -8.615850e-47 |
Msa0292330 | Msa1216110 | 0.812519 | 4.069395e-51 | -8.615850e-47 |
Msa0307270 | Msa1216110 | 0.806794 | 6.918024e-50 | -8.615850e-47 |
Msa0307670 | Msa1216110 | 0.817981 | 2.486720e-52 | -8.615850e-47 |
Msa0315980 | Msa1216110 | 0.843188 | 1.633723e-58 | -8.615850e-47 |
Msa0323270 | Msa1216110 | 0.826068 | 3.322584e-54 | -8.615850e-47 |
Msa0330520 | Msa1216110 | 0.814705 | 1.344946e-51 | -8.615850e-47 |
Msa0349710 | Msa1216110 | 0.828911 | 6.908173e-55 | -8.615850e-47 |
Msa1109390 | Msa1216110 | 0.822153 | 2.758954e-53 | -8.615850e-47 |
Msa1113340 | Msa1216110 | 0.806399 | 8.382861e-50 | -8.615850e-47 |
Msa1123210 | Msa1216110 | 0.817028 | 4.078553e-52 | -8.615850e-47 |
Msa1123970 | Msa1216110 | 0.827164 | 1.820035e-54 | -8.615850e-47 |
Msa1130280 | Msa1216110 | 0.805463 | 1.319092e-49 | -8.615850e-47 |
Msa1132530 | Msa1216110 | 0.818281 | 2.127628e-52 | -8.615850e-47 |
Msa1132840 | Msa1216110 | 0.810696 | 1.013986e-50 | -8.615850e-47 |
Msa1140220 | Msa1216110 | 0.815814 | 7.622696e-52 | -8.615850e-47 |
Msa1148960 | Msa1216110 | 0.857687 | 1.377111e-62 | -8.615850e-47 |
Msa1160910 | Msa1216110 | 0.815385 | 9.500651e-52 | -8.615850e-47 |
Msa1160920 | Msa1216110 | 0.812624 | 3.861201e-51 | -8.615850e-47 |
Msa1161970 | Msa1216110 | 0.807433 | 5.066799e-50 | -8.615850e-47 |
Msa1166190 | Msa1216110 | 0.806670 | 7.347855e-50 | -8.615850e-47 |
Msa1166290 | Msa1216110 | 0.800618 | 1.324180e-48 | -8.615850e-47 |
Msa1167470 | Msa1216110 | 0.890439 | 9.845711e-74 | -8.615850e-47 |
Msa1169650 | Msa1216110 | 0.819253 | 1.279989e-52 | -8.615850e-47 |
Msa1174840 | Msa1216110 | 0.820963 | 5.194212e-53 | -8.615850e-47 |
Msa1196450 | Msa1216110 | 0.850237 | 1.933089e-60 | -8.615850e-47 |
Msa1216090 | Msa1216110 | 0.909180 | 7.571212e-82 | -8.615850e-47 |
Msa1216110 | Msa1216340 | 0.891110 | 5.355442e-74 | -8.615850e-47 |
Msa1216110 | Msa1216360 | 0.871482 | 6.608482e-67 | -8.615850e-47 |
Msa1216110 | Msa1217210 | 0.805452 | 1.326104e-49 | -8.615850e-47 |
Msa1216110 | Msa1217910 | 0.800522 | 1.385539e-48 | -8.615850e-47 |
Msa1216110 | Msa1226520 | 0.827473 | 1.534479e-54 | -8.615850e-47 |
Msa1216110 | Msa1234710 | 0.826764 | 2.268231e-54 | -8.615850e-47 |
Msa1216110 | Msa1240770 | 0.832940 | 7.094477e-56 | -8.615850e-47 |
Msa1216110 | Msa1254760 | 0.809622 | 1.727875e-50 | -8.615850e-47 |
Msa1216110 | Msa1263010 | 0.816909 | 4.337206e-52 | -8.615850e-47 |
Msa1216110 | Msa1265650 | 0.800995 | 1.109597e-48 | -8.615850e-47 |
Msa1216110 | Msa1282260 | 0.806708 | 7.215712e-50 | -8.615850e-47 |
Msa1216110 | Msa1287200 | 0.803078 | 4.138839e-49 | -8.615850e-47 |
Msa1216110 | Msa1290770 | 0.808916 | 2.447490e-50 | -8.615850e-47 |
Msa1216110 | Msa1296950 | 0.802979 | 4.338321e-49 | -8.615850e-47 |
Msa1216110 | Msa1302000 | 0.835097 | 2.045863e-56 | -8.615850e-47 |
Msa1216110 | Msa1303560 | 0.814262 | 1.685013e-51 | -8.615850e-47 |
Msa1216110 | Msa1303650 | 0.816850 | 4.471550e-52 | -8.615850e-47 |
Msa1216110 | Msa1306340 | 0.803331 | 3.668513e-49 | -8.615850e-47 |
Msa1216110 | Msa1315130 | 0.858134 | 1.014421e-62 | -8.615850e-47 |
Msa1216110 | Msa1315160 | 0.865490 | 5.688113e-65 | -8.615850e-47 |
Msa1216110 | Msa1321340 | 0.841610 | 4.281653e-58 | -8.615850e-47 |
Msa1216110 | Msa1343180 | 0.804247 | 2.367598e-49 | -8.615850e-47 |
Msa1216110 | Msa1346560 | 0.802148 | 6.436944e-49 | -8.615850e-47 |
Msa1216110 | Msa1349690 | 0.829741 | 4.343776e-55 | -8.615850e-47 |
Msa1216110 | Msa1358290 | 0.832054 | 1.176361e-55 | -8.615850e-47 |
Msa1216110 | Msa1359690 | 0.832320 | 1.011322e-55 | -8.615850e-47 |
Msa1216110 | Msa1372040 | 0.819127 | 1.367382e-52 | -8.615850e-47 |
Msa1216110 | Msa1384460 | 0.813261 | 2.799031e-51 | -8.615850e-47 |
Msa1216110 | Msa1388210 | 0.805249 | 1.462403e-49 | -8.615850e-47 |
Msa1216110 | Msa1392740 | 0.827104 | 1.881043e-54 | -8.615850e-47 |
Msa1216110 | Msa1393780 | 0.869298 | 3.437861e-66 | -8.615850e-47 |
Msa1216110 | Msa1405460 | 0.835625 | 1.505009e-56 | -8.615850e-47 |
Msa1216110 | Msa1409410 | 0.803590 | 3.241679e-49 | -8.615850e-47 |
Msa1216110 | Msa1410160 | 0.808602 | 2.857482e-50 | -8.615850e-47 |
Msa1216110 | Msa1411790 | 0.817163 | 3.802574e-52 | -8.615850e-47 |
Msa1216110 | Msa1412000 | 0.801048 | 1.082242e-48 | -8.615850e-47 |
Msa1216110 | Msa1413690 | 0.807199 | 5.680510e-50 | -8.615850e-47 |
Msa1216110 | Msa1415540 | 0.820458 | 6.787856e-53 | -8.615850e-47 |
Msa1216110 | Msa1431480 | 0.841332 | 5.067098e-58 | -8.615850e-47 |
Msa1216110 | Msa1440630 | 0.830653 | 2.602224e-55 | -8.615850e-47 |
Msa1216110 | Msa1440960 | 0.829480 | 5.028402e-55 | -8.615850e-47 |
Msa1216110 | Msa1454140 | 0.827736 | 1.326750e-54 | -8.615850e-47 |
Msa1216110 | Msa1462490 | 0.830734 | 2.484902e-55 | -8.615850e-47 |
Msa0483910 | Msa1216110 | 0.848100 | 7.598436e-60 | -8.615850e-47 |
Msa0500380 | Msa1216110 | 0.828313 | 9.636680e-55 | -8.615850e-47 |
Msa0511470 | Msa1216110 | 0.808577 | 2.892046e-50 | -8.615850e-47 |
Msa0517250 | Msa1216110 | 0.876734 | 1.103157e-68 | -8.615850e-47 |
Msa0519760 | Msa1216110 | 0.807052 | 6.101730e-50 | -8.615850e-47 |
Msa0519840 | Msa1216110 | 0.809152 | 2.179599e-50 | -8.615850e-47 |
Msa0520990 | Msa1216110 | 0.806966 | 6.364144e-50 | -8.615850e-47 |
Msa0528570 | Msa1216110 | 0.821456 | 3.999383e-53 | -8.615850e-47 |
Msa0529030 | Msa1216110 | 0.839814 | 1.264787e-57 | -8.615850e-47 |
Msa0530780 | Msa1216110 | 0.817592 | 3.044975e-52 | -8.615850e-47 |
Msa0541300 | Msa1216110 | 0.808650 | 2.790098e-50 | -8.615850e-47 |
Msa0541310 | Msa1216110 | 0.800514 | 1.390980e-48 | -8.615850e-47 |
Msa0549370 | Msa1216110 | 0.802644 | 5.087477e-49 | -8.615850e-47 |
Msa0557370 | Msa1216110 | 0.835132 | 2.004840e-56 | -8.615850e-47 |
Msa0563940 | Msa1216110 | 0.834793 | 2.439876e-56 | -8.615850e-47 |
Msa0567170 | Msa1216110 | 0.815347 | 9.687222e-52 | -8.615850e-47 |
Msa0570120 | Msa1216110 | 0.834746 | 2.507452e-56 | -8.615850e-47 |
Msa0571290 | Msa1216110 | 0.817487 | 3.215180e-52 | -8.615850e-47 |
Msa0574050 | Msa1216110 | 0.844841 | 5.886614e-59 | -8.615850e-47 |
Msa0580370 | Msa1216110 | 0.814687 | 1.356691e-51 | -8.615850e-47 |
Msa0584420 | Msa1216110 | 0.804204 | 2.416758e-49 | -8.615850e-47 |
Msa0585020 | Msa1216110 | 0.809052 | 2.289227e-50 | -8.615850e-47 |
Msa0587620 | Msa1216110 | 0.857043 | 2.135748e-62 | -8.615850e-47 |
Msa0597270 | Msa1216110 | 0.830822 | 2.365302e-55 | -8.615850e-47 |
Msa0597790 | Msa1216110 | 0.827727 | 1.333765e-54 | -8.615850e-47 |
Msa0600930 | Msa1216110 | 0.821300 | 4.343615e-53 | -8.615850e-47 |
Msa0845440 | Msa1216110 | 0.812416 | 4.286804e-51 | -8.615850e-47 |
Msa0859290 | Msa1216110 | 0.811520 | 6.719305e-51 | -8.615850e-47 |
Msa0894790 | Msa1216110 | 0.832719 | 8.053036e-56 | -8.615850e-47 |
Msa0921590 | Msa1216110 | 0.801991 | 6.933667e-49 | -8.615850e-47 |
Msa0945110 | Msa1216110 | 0.805665 | 1.196367e-49 | -8.615850e-47 |
Msa0945190 | Msa1216110 | 0.822929 | 1.820478e-53 | -8.615850e-47 |
Msa0945260 | Msa1216110 | 0.806912 | 6.532488e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1216110 | MtrunA17_Chr4g0065651 | 83.865 | 533 | 52 | 9 | 1 | 520 | 1 | 512 | 3.21e-145 | 427 |
Msa1216110 | MtrunA17_Chr0c22g0493881 | 80.000 | 385 | 54 | 7 | 1 | 381 | 1 | 366 | 4.62e-92 | 285 |
Msa1216110 | MtrunA17_Chr4g0065621 | 84.365 | 307 | 32 | 5 | 1 | 307 | 1 | 291 | 3.91e-86 | 270 |
Msa1216110 | MtrunA17_Chr2g0287751 | 66.031 | 262 | 58 | 11 | 1 | 256 | 1 | 237 | 6.36e-57 | 197 |
Msa1216110 | MtrunA17_Chr2g0287741 | 49.628 | 538 | 175 | 25 | 10 | 520 | 15 | 483 | 2.50e-47 | 172 |
Msa1216110 | MtrunA17_Chr4g0065611 | 83.459 | 133 | 13 | 2 | 395 | 520 | 12 | 142 | 3.17e-39 | 139 |
Msa1216110 | MtrunA17_Chr0c22g0493871 | 84.091 | 132 | 12 | 2 | 396 | 520 | 1 | 130 | 3.95e-39 | 139 |
Msa1216110 | MtrunA17_Chr1g0208301 | 70.513 | 78 | 20 | 1 | 1 | 75 | 1 | 78 | 5.96e-30 | 120 |
Msa1216110 | MtrunA17_Chr4g0067291 | 50.000 | 114 | 41 | 3 | 7 | 120 | 71 | 168 | 1.56e-24 | 105 |
Msa1216110 | MtrunA17_Chr7g0269081 | 67.143 | 70 | 23 | 0 | 5 | 74 | 17 | 86 | 2.17e-24 | 103 |
Msa1216110 | MtrunA17_Chr3g0111541 | 53.521 | 71 | 33 | 0 | 3 | 73 | 5 | 75 | 3.63e-19 | 86.3 |
Msa1216110 | MtrunA17_Chr1g0192131 | 56.410 | 78 | 31 | 2 | 4 | 80 | 9 | 84 | 4.45e-19 | 89.4 |
Msa1216110 | MtrunA17_Chr7g0272571 | 56.061 | 66 | 29 | 0 | 9 | 74 | 32 | 97 | 1.28e-18 | 87.4 |
Msa1216110 | MtrunA17_Chr2g0296001 | 60.294 | 68 | 27 | 0 | 7 | 74 | 70 | 137 | 4.25e-17 | 82.8 |
Msa1216110 | MtrunA17_Chr1g0198341 | 39.189 | 74 | 45 | 0 | 10 | 83 | 4 | 77 | 1.91e-13 | 65.9 |
Msa1216110 | MtrunA17_Chr8g0382721 | 52.459 | 61 | 29 | 0 | 14 | 74 | 33 | 93 | 8.51e-13 | 66.2 |
Msa1216110 | MtrunA17_Chr1g0160201 | 45.902 | 61 | 33 | 0 | 14 | 74 | 29 | 89 | 1.95e-12 | 65.1 |
Msa1216110 | MtrunA17_Chr2g0285561 | 32.283 | 127 | 77 | 3 | 8 | 125 | 6 | 132 | 1.99e-12 | 68.2 |
Msa1216110 | MtrunA17_Chr3g0124411 | 47.761 | 67 | 35 | 0 | 8 | 74 | 28 | 94 | 2.75e-12 | 64.7 |
Msa1216110 | MtrunA17_Chr2g0325601 | 42.254 | 71 | 41 | 0 | 14 | 84 | 6 | 76 | 4.65e-12 | 63.9 |
Msa1216110 | MtrunA17_Chr1g0189221 | 38.356 | 73 | 45 | 0 | 7 | 79 | 50 | 122 | 4.78e-12 | 64.7 |
Msa1216110 | MtrunA17_Chr7g0251491 | 33.654 | 104 | 62 | 3 | 2 | 98 | 40 | 143 | 7.24e-12 | 63.9 |
Msa1216110 | MtrunA17_Chr4g0028461 | 48.276 | 87 | 43 | 2 | 12 | 96 | 68 | 154 | 1.07e-11 | 66.2 |
Msa1216110 | MtrunA17_Chr7g0218981 | 37.037 | 81 | 51 | 0 | 13 | 93 | 7 | 87 | 1.62e-11 | 61.6 |
Msa1216110 | MtrunA17_Chr5g0407821 | 37.179 | 78 | 49 | 0 | 3 | 80 | 16 | 93 | 2.02e-11 | 62.0 |
Msa1216110 | MtrunA17_Chr5g0404641 | 41.176 | 68 | 40 | 0 | 9 | 76 | 2 | 69 | 5.70e-11 | 61.2 |
Msa1216110 | MtrunA17_Chr4g0050571 | 45.455 | 66 | 35 | 1 | 10 | 75 | 101 | 165 | 9.34e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1216110 | AT3G06130.2 | 51.748 | 286 | 98 | 7 | 1 | 277 | 1 | 255 | 4.14e-47 | 167 |
Msa1216110 | AT3G06130.1 | 51.748 | 286 | 98 | 7 | 1 | 277 | 1 | 255 | 1.42e-45 | 166 |
Msa1216110 | AT5G19090.2 | 77.228 | 101 | 23 | 0 | 1 | 101 | 1 | 101 | 1.28e-43 | 161 |
Msa1216110 | AT5G19090.3 | 77.228 | 101 | 23 | 0 | 1 | 101 | 1 | 101 | 1.28e-43 | 161 |
Msa1216110 | AT5G19090.5 | 70.000 | 120 | 27 | 1 | 1 | 111 | 1 | 120 | 7.68e-43 | 161 |
Msa1216110 | AT5G19090.4 | 70.000 | 120 | 27 | 1 | 1 | 111 | 1 | 120 | 7.68e-43 | 161 |
Msa1216110 | AT5G19090.1 | 70.000 | 120 | 27 | 1 | 1 | 111 | 1 | 120 | 7.68e-43 | 161 |
Msa1216110 | AT3G05220.1 | 63.514 | 74 | 27 | 0 | 1 | 74 | 1 | 74 | 1.96e-26 | 113 |
Msa1216110 | AT5G27690.1 | 52.475 | 101 | 43 | 1 | 5 | 105 | 25 | 120 | 2.84e-26 | 110 |
Msa1216110 | AT1G23000.1 | 61.628 | 86 | 29 | 2 | 1 | 83 | 1 | 85 | 7.75e-26 | 109 |
Msa1216110 | AT1G23000.2 | 61.628 | 86 | 29 | 2 | 1 | 83 | 61 | 145 | 2.32e-25 | 108 |
Msa1216110 | AT5G37860.1 | 54.412 | 68 | 31 | 0 | 9 | 76 | 9 | 76 | 2.40e-19 | 88.2 |
Msa1216110 | AT1G56210.1 | 54.667 | 75 | 33 | 1 | 10 | 83 | 40 | 114 | 1.17e-18 | 88.2 |
Msa1216110 | AT1G06330.1 | 46.875 | 64 | 34 | 0 | 14 | 77 | 6 | 69 | 2.98e-13 | 67.8 |
Msa1216110 | AT1G66240.1 | 40.000 | 65 | 39 | 0 | 10 | 74 | 33 | 97 | 4.96e-12 | 63.2 |
Msa1216110 | AT4G10465.1 | 36.957 | 92 | 58 | 0 | 1 | 92 | 42 | 133 | 5.63e-12 | 65.1 |
Msa1216110 | AT3G56891.1 | 43.750 | 64 | 36 | 0 | 14 | 77 | 20 | 83 | 1.52e-11 | 63.5 |
Msa1216110 | AT3G02960.1 | 41.892 | 74 | 42 | 1 | 3 | 75 | 119 | 192 | 2.84e-11 | 64.3 |
Msa1216110 | AT3G56240.3 | 41.791 | 67 | 39 | 0 | 10 | 76 | 3 | 69 | 4.80e-11 | 60.8 |
Msa1216110 | AT3G56240.1 | 41.791 | 67 | 39 | 0 | 10 | 76 | 3 | 69 | 4.80e-11 | 60.8 |
Msa1216110 | AT4G23882.1 | 43.678 | 87 | 38 | 3 | 9 | 84 | 77 | 163 | 4.82e-11 | 64.3 |
Msa1216110 | AT1G71050.1 | 39.394 | 66 | 40 | 0 | 9 | 74 | 27 | 92 | 7.08e-11 | 61.2 |
Find 201 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAGGAAAGGTCACGGTTTC+AGG | 0.104424 | 8_1:-77715007 | Msa1216110:CDS |
CAAGATCTAGCTCAATTTAA+AGG | 0.182916 | 8_1:-77714653 | Msa1216110:CDS |
TACTATGTTAATTATGTTCT+TGG | 0.218147 | 8_1:-77713374 | Msa1216110:three_prime_UTR |
TGTTTGGTGTCTTTATTTAT+TGG | 0.221368 | 8_1:+77715732 | None:intergenic |
TAGGATTCTGATTCGGGTTC+TGG | 0.245506 | 8_1:+77714600 | None:intergenic |
GCAGCAGCAGCAACAGTTAA+TGG | 0.247779 | 8_1:-77713790 | Msa1216110:CDS |
GGATTCCCCTGCATCATTTC+CGG | 0.253390 | 8_1:+77713825 | None:intergenic |
TGCTGCTGCTGTTGTTGATA+TGG | 0.266573 | 8_1:+77713804 | None:intergenic |
AAGAGGCAAGTTTGAGAGTT+AGG | 0.278652 | 8_1:+77715639 | None:intergenic |
TATTGTTTCCACCACCCTTC+TGG | 0.290425 | 8_1:+77714789 | None:intergenic |
CATCTTTAGGATTCTGATTC+GGG | 0.295568 | 8_1:+77714594 | None:intergenic |
ATCAAGAAGCTTGCAAAATC+AGG | 0.297726 | 8_1:-77714962 | Msa1216110:CDS |
TTAACACCTTTAGCATCTTT+AGG | 0.299936 | 8_1:+77714581 | None:intergenic |
CCCTGCATCATTTCCGGTCC+TGG | 0.305122 | 8_1:+77713831 | None:intergenic |
AGCTTCTTGATGAGAACATT+TGG | 0.309355 | 8_1:+77714974 | None:intergenic |
TCAATCTCATCCTGGTAGTA+TGG | 0.312405 | 8_1:-77713976 | Msa1216110:CDS |
GTTACTTACTTTATTCCTAT+TGG | 0.313104 | 8_1:-77715448 | Msa1216110:five_prime_UTR |
TTGTATTTGTTGACCACCTT+TGG | 0.313268 | 8_1:+77714760 | None:intergenic |
CCATTCCCCATAGGCATAGA+AGG | 0.318053 | 8_1:+77714419 | None:intergenic |
CTTCTTTACTCATGACCAAT+AGG | 0.330043 | 8_1:+77715433 | None:intergenic |
TAAGGATCTGGAGGAGGATA+AGG | 0.339463 | 8_1:+77713651 | None:intergenic |
GCATCTTTAGGATTCTGATT+CGG | 0.340947 | 8_1:+77714593 | None:intergenic |
TTCTGGCCCGGGTGCTGATT+CGG | 0.342924 | 8_1:+77714617 | None:intergenic |
TCTGATTCGGGTTCTGGCCC+GGG | 0.343572 | 8_1:+77714606 | None:intergenic |
ACTGATTAACAACGTTGTTC+TGG | 0.344905 | 8_1:+77714885 | None:intergenic |
GGTGATTATAGATCTGAAAA+TGG | 0.348415 | 8_1:+77715507 | None:intergenic |
GGCGGAGGTGGAGGCGGTGG+TGG | 0.350490 | 8_1:-77714056 | Msa1216110:CDS |
TTCTGATTCGGGTTCTGGCC+CGG | 0.355308 | 8_1:+77714605 | None:intergenic |
GAAATCAATGTTATTGAGAA+TGG | 0.356396 | 8_1:-77713270 | Msa1216110:three_prime_UTR |
GGGTGGTGGAGGAAATAATA+TGG | 0.357181 | 8_1:-77713955 | Msa1216110:CDS |
TTACCACCCATTCGGTTCAT+AGG | 0.360924 | 8_1:+77713918 | None:intergenic |
TTCTATAAACTACTCCTCTA+TGG | 0.368659 | 8_1:+77713413 | None:intergenic |
CTAAAATCATCCTCATCTTC+AGG | 0.371343 | 8_1:+77714548 | None:intergenic |
GGTGGCGGAGGTGGAGGCGG+TGG | 0.373427 | 8_1:-77714059 | Msa1216110:CDS |
TGAAATGAAATGAGAATAGA+AGG | 0.374304 | 8_1:+77715575 | None:intergenic |
AAGGAAAAGAGAGAAATAAA+TGG | 0.382972 | 8_1:+77715594 | None:intergenic |
TACTTTCAAGGTGGTGGTGG+TGG | 0.384334 | 8_1:-77713855 | Msa1216110:CDS |
TAGTAGTCACTGAGAGAGAA+TGG | 0.385371 | 8_1:+77715683 | None:intergenic |
AAGAAAGGTGGTGGTGGTGG+TGG | 0.386759 | 8_1:-77714230 | Msa1216110:CDS |
GAGAAATGAGCAACCAGAGC+TGG | 0.388714 | 8_1:+77713233 | None:intergenic |
CCAAGAGTTTGCTCTATGTT+TGG | 0.388834 | 8_1:+77715716 | None:intergenic |
CCACCATAGCAGCACGTTGT+TGG | 0.393632 | 8_1:+77713751 | None:intergenic |
AATGGTGGTGGTGGCGGAAA+TGG | 0.397465 | 8_1:-77714332 | Msa1216110:CDS |
AACAAGAATGGAGGGAATAA+TGG | 0.397922 | 8_1:-77714131 | Msa1216110:CDS |
AGAGTTAGGAAGAGAGAGAA+TGG | 0.398540 | 8_1:+77715653 | None:intergenic |
CATCAAACAAACAATGTTCA+TGG | 0.400654 | 8_1:-77713577 | Msa1216110:three_prime_UTR |
ACTTGTGATAAATAAAGATC+TGG | 0.404190 | 8_1:+77715469 | None:intergenic |
CCAATTGGTGGCGGAGGTGG+AGG | 0.411942 | 8_1:-77714065 | Msa1216110:CDS |
AGAAACCCCTTAAGATGAAA+AGG | 0.415613 | 8_1:+77713441 | None:intergenic |
CAGAAACCTGGTGGTGGTGG+TGG | 0.418442 | 8_1:-77714308 | Msa1216110:CDS |
CAGGGAAACATGCTGAGTTA+TGG | 0.418710 | 8_1:-77714943 | Msa1216110:CDS |
AATGTTCAGGCTATGAATAA+TGG | 0.423799 | 8_1:-77714032 | Msa1216110:CDS |
GCTTCTTGATGAGAACATTT+GGG | 0.423822 | 8_1:+77714975 | None:intergenic |
CACGGCATGAATGGTGGAAA+TGG | 0.424726 | 8_1:-77714263 | Msa1216110:CDS |
TGTATTTGTTGACCACCTTT+GGG | 0.427960 | 8_1:+77714761 | None:intergenic |
AAAATCTTACAGAAAATTGA+TGG | 0.430085 | 8_1:-77715205 | Msa1216110:intron |
ATGATGGGTGGTGGAGGTGG+TGG | 0.432564 | 8_1:-77713999 | Msa1216110:CDS |
AAAATGATGGGTGGTGGAGG+TGG | 0.436665 | 8_1:-77714002 | Msa1216110:CDS |
GGTAACATTCCTGCTGTTCA+AGG | 0.436866 | 8_1:-77713900 | Msa1216110:CDS |
AGGCGGTGGTGGTAATGTTC+AGG | 0.438058 | 8_1:-77714045 | Msa1216110:CDS |
GGTTACTTTCAAGGTGGTGG+TGG | 0.439749 | 8_1:-77713858 | Msa1216110:CDS |
CCTCCACCTCCGCCACCAAT+TGG | 0.440018 | 8_1:+77714065 | None:intergenic |
TTCATGCCGTGAATTTGAAC+CGG | 0.440785 | 8_1:+77714275 | None:intergenic |
GGAAAGAAAGGTGGTGGTGG+TGG | 0.445640 | 8_1:-77714233 | Msa1216110:CDS |
ACTATGTTAATTATGTTCTT+GGG | 0.449339 | 8_1:-77713373 | Msa1216110:three_prime_UTR |
ATTGGTGGCGGAGGTGGAGG+CGG | 0.453929 | 8_1:-77714062 | Msa1216110:CDS |
ATACCAATTGGTGGCGGAGG+TGG | 0.457299 | 8_1:-77714068 | Msa1216110:CDS |
CCTTCTATGCCTATGGGGAA+TGG | 0.458052 | 8_1:-77714419 | Msa1216110:CDS |
TGATGAGTTTGATGATGAAA+TGG | 0.461887 | 8_1:-77714471 | Msa1216110:CDS |
AACAACTTCAACAGATGAAA+GGG | 0.462139 | 8_1:-77714679 | Msa1216110:CDS |
CGGTTCATAGGCATACTCAT+TGG | 0.463995 | 8_1:+77713930 | None:intergenic |
ACAGCTTATGAGTGCTATGA+AGG | 0.465021 | 8_1:-77714366 | Msa1216110:CDS |
TTAGGAAGAGAGAGAATGGT+GGG | 0.466008 | 8_1:+77715657 | None:intergenic |
AAGGATCTGGAGGAGGATAA+GGG | 0.466318 | 8_1:+77713652 | None:intergenic |
GGTCTACCGGCAGGCGGAGG+AGG | 0.468185 | 8_1:-77713879 | Msa1216110:CDS |
AAAGCATGTGAGTAAGGATC+TGG | 0.469198 | 8_1:+77713639 | None:intergenic |
TGGTGGTGGTGGTCCAGGAC+CGG | 0.469917 | 8_1:-77713844 | Msa1216110:CDS |
AAGAGTCTCTGAAACATAAG+AGG | 0.472199 | 8_1:+77715622 | None:intergenic |
AAATCAATGTTATTGAGAAT+GGG | 0.477281 | 8_1:-77713269 | Msa1216110:three_prime_UTR |
GAAACCCCTTAAGATGAAAA+GGG | 0.479165 | 8_1:+77713442 | None:intergenic |
TCCAGGACCGGAAATGATGC+AGG | 0.480211 | 8_1:-77713832 | Msa1216110:CDS |
GGCGGAGGAGGTTACTTTCA+AGG | 0.482444 | 8_1:-77713867 | Msa1216110:CDS |
ATTGACAATGGCAAAGGTGG+TGG | 0.482824 | 8_1:-77714848 | Msa1216110:CDS |
AGTAGTCACTGAGAGAGAAT+GGG | 0.484635 | 8_1:+77715684 | None:intergenic |
CCAAACATAGAGCAAACTCT+TGG | 0.488925 | 8_1:-77715716 | Msa1216110:five_prime_UTR |
CAATCTCATCCTGGTAGTAT+GGG | 0.490190 | 8_1:-77713975 | Msa1216110:CDS |
TGGTGGTGGAGGACCTGTGC+CGG | 0.493420 | 8_1:-77714294 | Msa1216110:CDS |
TCGCTGAAAGCATGTGAGTA+AGG | 0.494235 | 8_1:+77713633 | None:intergenic |
AAGGGTATGTCGATACCAAT+TGG | 0.495826 | 8_1:-77714080 | Msa1216110:CDS |
ATGAAAGAAATTCCCAGCTC+TGG | 0.499167 | 8_1:-77713246 | Msa1216110:three_prime_UTR |
TCCTGCTGTTCAAGGTCTAC+CGG | 0.501026 | 8_1:-77713892 | Msa1216110:CDS |
GCCGGTAGACCTTGAACAGC+AGG | 0.503563 | 8_1:+77713891 | None:intergenic |
GGTGGCCTTGCATACATCAT+TGG | 0.504586 | 8_1:+77713705 | None:intergenic |
TCTGGAGGAGGATAAGGGTA+AGG | 0.506412 | 8_1:+77713657 | None:intergenic |
CATCCTGGTAGTATGGGTGG+TGG | 0.513520 | 8_1:-77713969 | Msa1216110:CDS |
GTTCAAATTCACGGCATGAA+TGG | 0.514493 | 8_1:-77714272 | Msa1216110:CDS |
AAGGAAAGGTCACGGTTTCA+GGG | 0.515226 | 8_1:-77715006 | Msa1216110:CDS |
AATGGTGGTGGAAACAAGAA+TGG | 0.515647 | 8_1:-77714143 | Msa1216110:CDS |
CCGTGAATTTGAACCGGCAC+AGG | 0.516132 | 8_1:+77714281 | None:intergenic |
GGAGGTTACTTTCAAGGTGG+TGG | 0.516276 | 8_1:-77713861 | Msa1216110:CDS |
GGTGGTGGAGGAAATAATAT+GGG | 0.517548 | 8_1:-77713954 | Msa1216110:CDS |
AAGTAACCTCCTCCGCCTGC+CGG | 0.520732 | 8_1:+77713873 | None:intergenic |
GTAGTAATCAAAATAACGAT+GGG | 0.520911 | 8_1:-77714109 | Msa1216110:CDS |
CAGAATCCTAAAGATGCTAA+AGG | 0.521196 | 8_1:-77714587 | Msa1216110:CDS |
GATGCCGCCGAATCAGCACC+CGG | 0.521854 | 8_1:-77714624 | Msa1216110:CDS |
AATCAAAACCAGAAGGGTGG+TGG | 0.522342 | 8_1:-77714797 | Msa1216110:CDS |
GGAGGAAAGAAAGGTGGTGG+TGG | 0.522847 | 8_1:-77714236 | Msa1216110:CDS |
CCAACAACGTGCTGCTATGG+TGG | 0.525200 | 8_1:-77713751 | Msa1216110:CDS |
CAGGAATGTTACCACCCATT+CGG | 0.525275 | 8_1:+77713910 | None:intergenic |
CAACAACTTCAACAGATGAA+AGG | 0.526664 | 8_1:-77714680 | Msa1216110:CDS |
GTTAGGAAGAGAGAGAATGG+TGG | 0.526762 | 8_1:+77715656 | None:intergenic |
CAAGGTCTACCGGCAGGCGG+AGG | 0.530336 | 8_1:-77713882 | Msa1216110:CDS |
ATGTAATTCACCTCAGGAGG+TGG | 0.534211 | 8_1:+77713687 | None:intergenic |
AATGGCAATGGAGGAAAGAA+AGG | 0.535264 | 8_1:-77714245 | Msa1216110:CDS |
CCTGGTAGTATGGGTGGTGG+AGG | 0.540462 | 8_1:-77713966 | Msa1216110:CDS |
TCATTGGCTGCTGAAATCTC+TGG | 0.541514 | 8_1:+77713721 | None:intergenic |
GCTGTTCAAGGTCTACCGGC+AGG | 0.542942 | 8_1:-77713888 | Msa1216110:CDS |
GGACAGAAACCTGGTGGTGG+TGG | 0.543498 | 8_1:-77714311 | Msa1216110:CDS |
CCTGTGCCGGTTCAAATTCA+CGG | 0.544320 | 8_1:-77714281 | Msa1216110:CDS |
GAATCACATGACATTGCAGC+TGG | 0.546046 | 8_1:+77713599 | None:intergenic |
GGAGGAGGATAAGGGTAAGG+AGG | 0.547967 | 8_1:+77713660 | None:intergenic |
CTTGTGATAAATAAAGATCT+GGG | 0.548351 | 8_1:+77715470 | None:intergenic |
CCTCCACCACCCATACTACC+AGG | 0.550212 | 8_1:+77713966 | None:intergenic |
TCAAGAAGCTTGCAAAATCA+GGG | 0.551852 | 8_1:-77714961 | Msa1216110:CDS |
GGCGGAAATGGACAGAAACC+TGG | 0.552019 | 8_1:-77714320 | Msa1216110:CDS |
TCGATACCAATTGGTGGCGG+AGG | 0.554646 | 8_1:-77714071 | Msa1216110:CDS |
GAACCAACAACGTGCTGCTA+TGG | 0.559788 | 8_1:-77713754 | Msa1216110:CDS |
GGTGGTGGTCAATCTCATCC+TGG | 0.561328 | 8_1:-77713984 | Msa1216110:CDS |
AGAAATGAGCAACCAGAGCT+GGG | 0.565461 | 8_1:+77713234 | None:intergenic |
CAAATTCACGGCATGAATGG+TGG | 0.565701 | 8_1:-77714269 | Msa1216110:CDS |
GGAGGGAATAATCAGAATCA+AGG | 0.567228 | 8_1:-77714209 | Msa1216110:CDS |
TATATTGCATAAAATTAGAG+AGG | 0.567583 | 8_1:+77713524 | None:intergenic |
TGAAGTTGTTGCTGCTGCTG+AGG | 0.567794 | 8_1:+77714719 | None:intergenic |
GGATACATGTAATTCACCTC+AGG | 0.568572 | 8_1:+77713681 | None:intergenic |
GGTGGTGGAAACAAGAATGG+AGG | 0.570437 | 8_1:-77714140 | Msa1216110:CDS |
CATTCCCCATAGGCATAGAA+GGG | 0.572536 | 8_1:+77714420 | None:intergenic |
TTTGTTGACCACCTTTGGGT+TGG | 0.576873 | 8_1:+77714765 | None:intergenic |
ATGAATGGTGGAAATGGCAA+TGG | 0.579729 | 8_1:-77714257 | Msa1216110:CDS |
GAGTTTGATGATGAAATGGT+TGG | 0.582338 | 8_1:-77714467 | Msa1216110:CDS |
GGTAGTAATCAAAATAACGA+TGG | 0.583746 | 8_1:-77714110 | Msa1216110:CDS |
AGCAGCCAATGATGTATGCA+AGG | 0.586173 | 8_1:-77713710 | Msa1216110:CDS |
ACAAACAATGTTCATGGTGA+TGG | 0.588045 | 8_1:-77713571 | Msa1216110:three_prime_UTR |
GGGGTTTCTAATTACCATAG+AGG | 0.591890 | 8_1:-77713427 | Msa1216110:three_prime_UTR |
AAATCAGAATCAAAACCAGA+AGG | 0.592384 | 8_1:-77714804 | Msa1216110:CDS |
GGTGCTCACATGATGTTGAA+TGG | 0.593764 | 8_1:-77714398 | Msa1216110:CDS |
GTGGTGGAAACAAGAATGGA+GGG | 0.595867 | 8_1:-77714139 | Msa1216110:CDS |
GGTCCTCCACCACCACCACC+AGG | 0.597489 | 8_1:+77714302 | None:intergenic |
CAACAAATACAACAACTACA+AGG | 0.597690 | 8_1:-77714749 | Msa1216110:CDS |
ATTTGATGTGCCTGAAGATG+AGG | 0.599659 | 8_1:-77714558 | Msa1216110:CDS |
GGCAATGGAGGAAAGAAAGG+TGG | 0.603629 | 8_1:-77714242 | Msa1216110:CDS |
AATCAGAATCAAAACCAGAA+GGG | 0.603694 | 8_1:-77714803 | Msa1216110:CDS |
TGTGAGTAAGGATCTGGAGG+AGG | 0.603879 | 8_1:+77713645 | None:intergenic |
AACAATAACCAACCCAAAGG+TGG | 0.605261 | 8_1:-77714773 | Msa1216110:CDS |
AATAATCAGAATCAAGGTGG+AGG | 0.605707 | 8_1:-77714203 | Msa1216110:CDS |
CAATTGAAGTCACATGGCCA+CGG | 0.606226 | 8_1:-77715819 | None:intergenic |
AATGGAGGAAAGAAAGGTGG+TGG | 0.606743 | 8_1:-77714239 | Msa1216110:CDS |
GATAGATGCAGAACAAGGAA+AGG | 0.608149 | 8_1:-77715020 | Msa1216110:CDS |
CAAATTGACAATGGCAAAGG+TGG | 0.610618 | 8_1:-77714851 | Msa1216110:CDS |
TTCATAGCACTCATAAGCTG+TGG | 0.610940 | 8_1:+77714368 | None:intergenic |
ATGCAAATTGACAATGGCAA+AGG | 0.611165 | 8_1:-77714854 | Msa1216110:CDS |
TCTCATCCTGGTAGTATGGG+TGG | 0.611507 | 8_1:-77713972 | Msa1216110:CDS |
AATGAAGTCACTCACTTCTG+TGG | 0.611607 | 8_1:-77715769 | Msa1216110:five_prime_UTR |
AAAGTGAACATACACTGTGA+TGG | 0.617847 | 8_1:-77715247 | Msa1216110:CDS |
CCAGGACCGGAAATGATGCA+GGG | 0.618163 | 8_1:-77713831 | Msa1216110:CDS |
ATGTGAGCACCATTCCCCAT+AGG | 0.619841 | 8_1:+77714410 | None:intergenic |
AAACCCCTTAAGATGAAAAG+GGG | 0.621521 | 8_1:+77713443 | None:intergenic |
AGTATGCCTATGAACCGAAT+GGG | 0.622246 | 8_1:-77713924 | Msa1216110:CDS |
GGTCACGGTTTCAGGGAATG+TGG | 0.626243 | 8_1:-77714999 | Msa1216110:CDS |
TGGCCCGGGTGCTGATTCGG+CGG | 0.627521 | 8_1:+77714620 | None:intergenic |
AAGAACATGCAAATTGACAA+TGG | 0.628311 | 8_1:-77714860 | Msa1216110:CDS |
ATGTCGATACCAATTGGTGG+CGG | 0.631785 | 8_1:-77714074 | Msa1216110:CDS |
GTTCAAGGTCTACCGGCAGG+CGG | 0.633909 | 8_1:-77713885 | Msa1216110:CDS |
GCATGTGAGTAAGGATCTGG+AGG | 0.633919 | 8_1:+77713642 | None:intergenic |
GTAGTCACTGAGAGAGAATG+GGG | 0.633943 | 8_1:+77715685 | None:intergenic |
GGTATGTCGATACCAATTGG+TGG | 0.637679 | 8_1:-77714077 | Msa1216110:CDS |
CTTATGAGTGCTATGAAGGG+TGG | 0.638762 | 8_1:-77714362 | Msa1216110:CDS |
TACATGTAATTCACCTCAGG+AGG | 0.640426 | 8_1:+77713684 | None:intergenic |
TGCAGAACAAGGAAAGGTCA+CGG | 0.641237 | 8_1:-77715014 | Msa1216110:CDS |
CAGCTTATGAGTGCTATGAA+GGG | 0.642847 | 8_1:-77714365 | Msa1216110:CDS |
ATGCCGCCGAATCAGCACCC+GGG | 0.644621 | 8_1:-77714623 | Msa1216110:CDS |
ACTGAGATAGATGCAGAACA+AGG | 0.647644 | 8_1:-77715025 | Msa1216110:CDS |
ATATTGCATAAAATTAGAGA+GGG | 0.648642 | 8_1:+77713525 | None:intergenic |
TAGTAATCAAAATAACGATG+GGG | 0.650397 | 8_1:-77714108 | Msa1216110:CDS |
ATGCCTATGAACCGAATGGG+TGG | 0.650716 | 8_1:-77713921 | Msa1216110:CDS |
GAGTATGCCTATGAACCGAA+TGG | 0.653536 | 8_1:-77713925 | Msa1216110:CDS |
AATGGACAGAAACCTGGTGG+TGG | 0.653878 | 8_1:-77714314 | Msa1216110:CDS |
AGTAATCAAAATAACGATGG+GGG | 0.662461 | 8_1:-77714107 | Msa1216110:CDS |
CAGAATCAAAACCAGAAGGG+TGG | 0.662734 | 8_1:-77714800 | Msa1216110:CDS |
TGCATAAAATTAGAGAGGGT+AGG | 0.663015 | 8_1:+77713529 | None:intergenic |
AATGGTGGAAATGGCAATGG+AGG | 0.665518 | 8_1:-77714254 | Msa1216110:CDS |
CAGGACCGGAAATGATGCAG+GGG | 0.670762 | 8_1:-77713830 | Msa1216110:CDS |
ATTCCCCATAGGCATAGAAG+GGG | 0.672578 | 8_1:+77714421 | None:intergenic |
AAAGGTGGTGGAAACAACAA+AGG | 0.677851 | 8_1:-77714836 | Msa1216110:CDS |
GGGAATAATCAGAATCAAGG+TGG | 0.678494 | 8_1:-77714206 | Msa1216110:CDS |
GGAAACAATAACCAACCCAA+AGG | 0.682874 | 8_1:-77714776 | Msa1216110:CDS |
GTATGCAAGGCCACCTCCTG+AGG | 0.686248 | 8_1:-77713697 | Msa1216110:CDS |
AACCCCTTAAGATGAAAAGG+GGG | 0.692080 | 8_1:+77713444 | None:intergenic |
TTCCCCATAGGCATAGAAGG+GGG | 0.698362 | 8_1:+77714422 | None:intergenic |
GTGGTGGAGGAAATAATATG+GGG | 0.726893 | 8_1:-77713953 | Msa1216110:CDS |
GGAAATGGACAGAAACCTGG+TGG | 0.762212 | 8_1:-77714317 | Msa1216110:CDS |
GGAGGAGGTTACTTTCAAGG+TGG | 0.764262 | 8_1:-77713864 | Msa1216110:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTATTATTTTGATTATTGTT+TGG | + | chr8_1:77714098-77714117 | None:intergenic | 10.0% |
!!! | TTTATATGTGTTTTATATTT+TGG | - | chr8_1:77715679-77715698 | Msa1216110:five_prime_UTR | 10.0% |
!!! | TTATATGTGTTTTATATTTT+GGG | - | chr8_1:77715680-77715699 | Msa1216110:five_prime_UTR | 10.0% |
!! | TAAAGCAAAAAAAATAAAGA+TGG | + | chr8_1:77713635-77713654 | None:intergenic | 15.0% |
!! | AAAATCTTACAGAAAATTGA+TGG | - | chr8_1:77713798-77713817 | Msa1216110:CDS | 20.0% |
!! | ATAATTGAAAGCTATGATTA+AGG | + | chr8_1:77713867-77713886 | None:intergenic | 20.0% |
!! | AACATTTACTCTCAAAATTA+AGG | + | chr8_1:77713913-77713932 | None:intergenic | 20.0% |
!!! | TTTTGATTATTGTTTGGTTT+GGG | + | chr8_1:77714092-77714111 | None:intergenic | 20.0% |
!!! | ATTTTGATTATTGTTTGGTT+TGG | + | chr8_1:77714093-77714112 | None:intergenic | 20.0% |
!!! | TAATGGATTTCAAAAAATGA+TGG | - | chr8_1:77714988-77715007 | Msa1216110:CDS | 20.0% |
!!! | AATGGATTTCAAAAAATGAT+GGG | - | chr8_1:77714989-77715008 | Msa1216110:CDS | 20.0% |
!! | ATATTGCATAAAATTAGAGA+GGG | + | chr8_1:77715481-77715500 | None:intergenic | 20.0% |
!! | TATATTGCATAAAATTAGAG+AGG | + | chr8_1:77715482-77715501 | None:intergenic | 20.0% |
!! | TACTATGTTAATTATGTTCT+TGG | - | chr8_1:77715629-77715648 | Msa1216110:five_prime_UTR | 20.0% |
!! | ACTATGTTAATTATGTTCTT+GGG | - | chr8_1:77715630-77715649 | Msa1216110:five_prime_UTR | 20.0% |
!! | AAATCAATGTTATTGAGAAT+GGG | - | chr8_1:77715734-77715753 | Msa1216110:five_prime_UTR | 20.0% |
!!! | TGTTTGGTGTCTTTATTTAT+TGG | + | chr8_1:77713274-77713293 | None:intergenic | 25.0% |
! | AAGGAAAAGAGAGAAATAAA+TGG | + | chr8_1:77713412-77713431 | None:intergenic | 25.0% |
! | TGAAATGAAATGAGAATAGA+AGG | + | chr8_1:77713431-77713450 | None:intergenic | 25.0% |
!!! | TTGTTTGGTTGAGTTTTATT+TGG | + | chr8_1:77713462-77713481 | None:intergenic | 25.0% |
!! | GAGTATTTTATGTTCTTGTT+TGG | + | chr8_1:77713477-77713496 | None:intergenic | 25.0% |
! | CTTGTGATAAATAAAGATCT+GGG | + | chr8_1:77713536-77713555 | None:intergenic | 25.0% |
! | ACTTGTGATAAATAAAGATC+TGG | + | chr8_1:77713537-77713556 | None:intergenic | 25.0% |
! | GTTACTTACTTTATTCCTAT+TGG | - | chr8_1:77713555-77713574 | Msa1216110:three_prime_UTR | 25.0% |
!!! | AGAAGAATTTTTGAAGATAC+AGG | - | chr8_1:77713588-77713607 | Msa1216110:exon | 25.0% |
!! | TCAAAATTAAGGTTCTGTTT+TGG | + | chr8_1:77713902-77713921 | None:intergenic | 25.0% |
!!! | TGATTTTAGTGATGATGAAA+TGG | - | chr8_1:77714469-77714488 | Msa1216110:CDS | 25.0% |
! | GTAGTAATCAAAATAACGAT+GGG | - | chr8_1:77714894-77714913 | Msa1216110:CDS | 25.0% |
! | TAGTAATCAAAATAACGATG+GGG | - | chr8_1:77714895-77714914 | Msa1216110:CDS | 25.0% |
! | TAAAAAACTCATGTTTCACT+GGG | + | chr8_1:77715510-77715529 | None:intergenic | 25.0% |
! | GAAATCAATGTTATTGAGAA+TGG | - | chr8_1:77715733-77715752 | Msa1216110:five_prime_UTR | 25.0% |
!!! | TTTTTTCAGCAATTTAACCG+TGG | + | chr8_1:77713204-77713223 | None:intergenic | 30.0% |
GGTGATTATAGATCTGAAAA+TGG | + | chr8_1:77713499-77713518 | None:intergenic | 30.0% | |
ATAAAGATGGAGAATGTGAT+GGG | + | chr8_1:77713622-77713641 | None:intergenic | 30.0% | |
AATAAAGATGGAGAATGTGA+TGG | + | chr8_1:77713623-77713642 | None:intergenic | 30.0% | |
TTCTGCATACACAAATAACA+AGG | + | chr8_1:77713726-77713745 | None:intergenic | 30.0% | |
!! | TGTGTTGATTAATGAATGAC+AGG | - | chr8_1:77713945-77713964 | Msa1216110:CDS | 30.0% |
AAGAACATGCAAATTGACAA+TGG | - | chr8_1:77714143-77714162 | Msa1216110:CDS | 30.0% | |
AAATCAGAATCAAAACCAGA+AGG | - | chr8_1:77714199-77714218 | Msa1216110:CDS | 30.0% | |
AATCAGAATCAAAACCAGAA+GGG | - | chr8_1:77714200-77714219 | Msa1216110:CDS | 30.0% | |
CAACAAATACAACAACTACA+AGG | - | chr8_1:77714254-77714273 | Msa1216110:CDS | 30.0% | |
AACAACTTCAACAGATGAAA+GGG | - | chr8_1:77714324-77714343 | Msa1216110:CDS | 30.0% | |
! | CAAGATCTAGCTCAATTTAA+AGG | - | chr8_1:77714350-77714369 | Msa1216110:CDS | 30.0% |
TTAACACCTTTAGCATCTTT+AGG | + | chr8_1:77714425-77714444 | None:intergenic | 30.0% | |
!! | TGATGAGTTTGATGATGAAA+TGG | - | chr8_1:77714532-77714551 | Msa1216110:CDS | 30.0% |
ATGCCAGAAGCTAAAAATAA+TGG | - | chr8_1:77714842-77714861 | Msa1216110:CDS | 30.0% | |
GGTAGTAATCAAAATAACGA+TGG | - | chr8_1:77714893-77714912 | Msa1216110:CDS | 30.0% | |
AGTAATCAAAATAACGATGG+GGG | - | chr8_1:77714896-77714915 | Msa1216110:CDS | 30.0% | |
AATGTTCAGGCTATGAATAA+TGG | - | chr8_1:77714971-77714990 | Msa1216110:CDS | 30.0% | |
CATCAAACAAACAATGTTCA+TGG | - | chr8_1:77715426-77715445 | Msa1216110:CDS | 30.0% | |
CTAAAAAACTCATGTTTCAC+TGG | + | chr8_1:77715511-77715530 | None:intergenic | 30.0% | |
TTCTATAAACTACTCCTCTA+TGG | + | chr8_1:77715593-77715612 | None:intergenic | 30.0% | |
!! | AAGAGTCTCTGAAACATAAG+AGG | + | chr8_1:77713384-77713403 | None:intergenic | 35.0% |
ATCTGGGCTATAGAGAAAAA+TGG | + | chr8_1:77713520-77713539 | None:intergenic | 35.0% | |
CTTCTTTACTCATGACCAAT+AGG | + | chr8_1:77713573-77713592 | None:intergenic | 35.0% | |
AAAGTGAACATACACTGTGA+TGG | - | chr8_1:77713756-77713775 | Msa1216110:CDS | 35.0% | |
GCTTCTTGATGAGAACATTT+GGG | + | chr8_1:77714031-77714050 | None:intergenic | 35.0% | |
AGCTTCTTGATGAGAACATT+TGG | + | chr8_1:77714032-77714051 | None:intergenic | 35.0% | |
ATCAAGAAGCTTGCAAAATC+AGG | - | chr8_1:77714041-77714060 | Msa1216110:CDS | 35.0% | |
TCAAGAAGCTTGCAAAATCA+GGG | - | chr8_1:77714042-77714061 | Msa1216110:CDS | 35.0% | |
ACTGATTAACAACGTTGTTC+TGG | + | chr8_1:77714121-77714140 | None:intergenic | 35.0% | |
ATGCAAATTGACAATGGCAA+AGG | - | chr8_1:77714149-77714168 | Msa1216110:CDS | 35.0% | |
! | TGTATTTGTTGACCACCTTT+GGG | + | chr8_1:77714245-77714264 | None:intergenic | 35.0% |
! | TTGTATTTGTTGACCACCTT+TGG | + | chr8_1:77714246-77714265 | None:intergenic | 35.0% |
CAACAACTTCAACAGATGAA+AGG | - | chr8_1:77714323-77714342 | Msa1216110:CDS | 35.0% | |
!! | CATCTTTAGGATTCTGATTC+GGG | + | chr8_1:77714412-77714431 | None:intergenic | 35.0% |
!! | GCATCTTTAGGATTCTGATT+CGG | + | chr8_1:77714413-77714432 | None:intergenic | 35.0% |
CAGAATCCTAAAGATGCTAA+AGG | - | chr8_1:77714416-77714435 | Msa1216110:CDS | 35.0% | |
CTAAAATCATCCTCATCTTC+AGG | + | chr8_1:77714458-77714477 | None:intergenic | 35.0% | |
!! | GAGTTTGATGATGAAATGGT+TGG | - | chr8_1:77714536-77714555 | Msa1216110:CDS | 35.0% |
! | ATGAAGGGTGGCAATTTTAA+TGG | - | chr8_1:77714653-77714672 | Msa1216110:CDS | 35.0% |
AATAATCAGAATCAAGGTGG+AGG | - | chr8_1:77714800-77714819 | Msa1216110:CDS | 35.0% | |
GGTGGAGGTAACAAAAATAA+TGG | - | chr8_1:77714815-77714834 | Msa1216110:CDS | 35.0% | |
GGAGGTAACAAAAATAATGG+TGG | - | chr8_1:77714818-77714837 | Msa1216110:CDS | 35.0% | |
!!! | CCACCATTATTTTTAGCTTC+TGG | + | chr8_1:77714848-77714867 | None:intergenic | 35.0% |
CCAGAAGCTAAAAATAATGG+TGG | - | chr8_1:77714845-77714864 | Msa1216110:CDS | 35.0% | |
GAAGCTAAAAATAATGGTGG+TGG | - | chr8_1:77714848-77714867 | Msa1216110:CDS | 35.0% | |
AACAAGAATGGAGGGAATAA+TGG | - | chr8_1:77714872-77714891 | Msa1216110:CDS | 35.0% | |
! | GGATTTCAAAAAATGATGGG+TGG | - | chr8_1:77714992-77715011 | Msa1216110:CDS | 35.0% |
!! | TTTCAAAAAATGATGGGTGG+TGG | - | chr8_1:77714995-77715014 | Msa1216110:CDS | 35.0% |
ACAAACAATGTTCATGGTGA+TGG | - | chr8_1:77715432-77715451 | Msa1216110:exon | 35.0% | |
TGCATAAAATTAGAGAGGGT+AGG | + | chr8_1:77715477-77715496 | None:intergenic | 35.0% | |
AAACCCCTTAAGATGAAAAG+GGG | + | chr8_1:77715563-77715582 | None:intergenic | 35.0% | |
GAAACCCCTTAAGATGAAAA+GGG | + | chr8_1:77715564-77715583 | None:intergenic | 35.0% | |
AGAAACCCCTTAAGATGAAA+AGG | + | chr8_1:77715565-77715584 | None:intergenic | 35.0% | |
AATGAAGTCACTCACTTCTG+TGG | - | chr8_1:77713234-77713253 | Msa1216110:three_prime_UTR | 40.0% | |
! | CCAAGAGTTTGCTCTATGTT+TGG | + | chr8_1:77713290-77713309 | None:intergenic | 40.0% |
CCAAACATAGAGCAAACTCT+TGG | - | chr8_1:77713287-77713306 | Msa1216110:three_prime_UTR | 40.0% | |
AGTAGTCACTGAGAGAGAAT+GGG | + | chr8_1:77713322-77713341 | None:intergenic | 40.0% | |
TAGTAGTCACTGAGAGAGAA+TGG | + | chr8_1:77713323-77713342 | None:intergenic | 40.0% | |
TTAGGAAGAGAGAGAATGGT+GGG | + | chr8_1:77713349-77713368 | None:intergenic | 40.0% | |
AGAGTTAGGAAGAGAGAGAA+TGG | + | chr8_1:77713353-77713372 | None:intergenic | 40.0% | |
AAGAGGCAAGTTTGAGAGTT+AGG | + | chr8_1:77713367-77713386 | None:intergenic | 40.0% | |
ACTGAGATAGATGCAGAACA+AGG | - | chr8_1:77713978-77713997 | Msa1216110:CDS | 40.0% | |
GATAGATGCAGAACAAGGAA+AGG | - | chr8_1:77713983-77714002 | Msa1216110:CDS | 40.0% | |
CAAATTGACAATGGCAAAGG+TGG | - | chr8_1:77714152-77714171 | Msa1216110:CDS | 40.0% | |
!! | AAAGGTGGTGGAAACAACAA+AGG | - | chr8_1:77714167-77714186 | Msa1216110:CDS | 40.0% |
GGAAACAATAACCAACCCAA+AGG | - | chr8_1:77714227-77714246 | Msa1216110:CDS | 40.0% | |
AACAATAACCAACCCAAAGG+TGG | - | chr8_1:77714230-77714249 | Msa1216110:CDS | 40.0% | |
ATTTGATGTGCCTGAAGATG+AGG | - | chr8_1:77714445-77714464 | Msa1216110:CDS | 40.0% | |
GAAGGGGGTTTCATCTTATT+AGG | + | chr8_1:77714569-77714588 | None:intergenic | 40.0% | |
TTCATAGCACTCATAAGCTG+TGG | + | chr8_1:77714638-77714657 | None:intergenic | 40.0% | |
ACAGCTTATGAGTGCTATGA+AGG | - | chr8_1:77714637-77714656 | Msa1216110:CDS | 40.0% | |
CAGCTTATGAGTGCTATGAA+GGG | - | chr8_1:77714638-77714657 | Msa1216110:CDS | 40.0% | |
!! | AAGGGTGGCAATTTTAATGG+TGG | - | chr8_1:77714656-77714675 | Msa1216110:CDS | 40.0% |
!!! | AATTTTAATGGTGGTGGTGG+CGG | - | chr8_1:77714665-77714684 | Msa1216110:CDS | 40.0% |
TTCATGCCGTGAATTTGAAC+CGG | + | chr8_1:77714731-77714750 | None:intergenic | 40.0% | |
GTTCAAATTCACGGCATGAA+TGG | - | chr8_1:77714731-77714750 | Msa1216110:CDS | 40.0% | |
! | ATGAATGGTGGAAATGGCAA+TGG | - | chr8_1:77714746-77714765 | Msa1216110:CDS | 40.0% |
AATGGCAATGGAGGAAAGAA+AGG | - | chr8_1:77714758-77714777 | Msa1216110:CDS | 40.0% | |
GGAGGGAATAATCAGAATCA+AGG | - | chr8_1:77714794-77714813 | Msa1216110:CDS | 40.0% | |
GGGAATAATCAGAATCAAGG+TGG | - | chr8_1:77714797-77714816 | Msa1216110:CDS | 40.0% | |
!! | AATGGTGGTGGAAACAAGAA+TGG | - | chr8_1:77714860-77714879 | Msa1216110:CDS | 40.0% |
AAATAACGATGGGGGTAAGA+AGG | - | chr8_1:77714904-77714923 | Msa1216110:CDS | 40.0% | |
AATAACGATGGGGGTAAGAA+GGG | - | chr8_1:77714905-77714924 | Msa1216110:CDS | 40.0% | |
! | AAGGGTATGTCGATACCAAT+TGG | - | chr8_1:77714923-77714942 | Msa1216110:CDS | 40.0% |
TCAATCTCATCCTGGTAGTA+TGG | - | chr8_1:77715027-77715046 | Msa1216110:CDS | 40.0% | |
CAATCTCATCCTGGTAGTAT+GGG | - | chr8_1:77715028-77715047 | Msa1216110:CDS | 40.0% | |
!! | GGTGGTGGAGGAAATAATAT+GGG | - | chr8_1:77715049-77715068 | Msa1216110:intron | 40.0% |
! | GTGGTGGAGGAAATAATATG+GGG | - | chr8_1:77715050-77715069 | Msa1216110:intron | 40.0% |
AGTATGCCTATGAACCGAAT+GGG | - | chr8_1:77715079-77715098 | Msa1216110:intron | 40.0% | |
TACATGTAATTCACCTCAGG+AGG | + | chr8_1:77715322-77715341 | None:intergenic | 40.0% | |
GGATACATGTAATTCACCTC+AGG | + | chr8_1:77715325-77715344 | None:intergenic | 40.0% | |
AAAGCATGTGAGTAAGGATC+TGG | + | chr8_1:77715367-77715386 | None:intergenic | 40.0% | |
! | TTGACCCCCTTTTCATCTTA+AGG | - | chr8_1:77715555-77715574 | Msa1216110:five_prime_UTR | 40.0% |
! | TGACCCCCTTTTCATCTTAA+GGG | - | chr8_1:77715556-77715575 | Msa1216110:five_prime_UTR | 40.0% |
AACCCCTTAAGATGAAAAGG+GGG | + | chr8_1:77715562-77715581 | None:intergenic | 40.0% | |
GGGGTTTCTAATTACCATAG+AGG | - | chr8_1:77715576-77715595 | Msa1216110:five_prime_UTR | 40.0% | |
ATGAAAGAAATTCCCAGCTC+TGG | - | chr8_1:77715757-77715776 | Msa1216110:five_prime_UTR | 40.0% | |
GTAGTCACTGAGAGAGAATG+GGG | + | chr8_1:77713321-77713340 | None:intergenic | 45.0% | |
GTTAGGAAGAGAGAGAATGG+TGG | + | chr8_1:77713350-77713369 | None:intergenic | 45.0% | |
TGCAGAACAAGGAAAGGTCA+CGG | - | chr8_1:77713989-77714008 | Msa1216110:CDS | 45.0% | |
AAGGAAAGGTCACGGTTTCA+GGG | - | chr8_1:77713997-77714016 | Msa1216110:CDS | 45.0% | |
CAGGGAAACATGCTGAGTTA+TGG | - | chr8_1:77714060-77714079 | Msa1216110:CDS | 45.0% | |
ATTGACAATGGCAAAGGTGG+TGG | - | chr8_1:77714155-77714174 | Msa1216110:CDS | 45.0% | |
CAGAATCAAAACCAGAAGGG+TGG | - | chr8_1:77714203-77714222 | Msa1216110:CDS | 45.0% | |
AATCAAAACCAGAAGGGTGG+TGG | - | chr8_1:77714206-77714225 | Msa1216110:CDS | 45.0% | |
TATTGTTTCCACCACCCTTC+TGG | + | chr8_1:77714217-77714236 | None:intergenic | 45.0% | |
TTTGTTGACCACCTTTGGGT+TGG | + | chr8_1:77714241-77714260 | None:intergenic | 45.0% | |
!! | TAGGATTCTGATTCGGGTTC+TGG | + | chr8_1:77714406-77714425 | None:intergenic | 45.0% |
GGGGGTTTCATCTTATTAGG+TGG | + | chr8_1:77714566-77714585 | None:intergenic | 45.0% | |
AAACCCCCTTCTATGCCTAT+GGG | - | chr8_1:77714578-77714597 | Msa1216110:CDS | 45.0% | |
ATTCCCCATAGGCATAGAAG+GGG | + | chr8_1:77714585-77714604 | None:intergenic | 45.0% | |
CATTCCCCATAGGCATAGAA+GGG | + | chr8_1:77714586-77714605 | None:intergenic | 45.0% | |
GGTGCTCACATGATGTTGAA+TGG | - | chr8_1:77714605-77714624 | Msa1216110:CDS | 45.0% | |
CTTATGAGTGCTATGAAGGG+TGG | - | chr8_1:77714641-77714660 | Msa1216110:CDS | 45.0% | |
!! | GGTGGCAATTTTAATGGTGG+TGG | - | chr8_1:77714659-77714678 | Msa1216110:CDS | 45.0% |
!!! | GGCAATTTTAATGGTGGTGG+TGG | - | chr8_1:77714662-77714681 | Msa1216110:CDS | 45.0% |
CAAATTCACGGCATGAATGG+TGG | - | chr8_1:77714734-77714753 | Msa1216110:CDS | 45.0% | |
! | AATGGTGGAAATGGCAATGG+AGG | - | chr8_1:77714749-77714768 | Msa1216110:CDS | 45.0% |
AATGGAGGAAAGAAAGGTGG+TGG | - | chr8_1:77714764-77714783 | Msa1216110:CDS | 45.0% | |
! | GTGGTGGAAACAAGAATGGA+GGG | - | chr8_1:77714864-77714883 | Msa1216110:CDS | 45.0% |
GGTATGTCGATACCAATTGG+TGG | - | chr8_1:77714926-77714945 | Msa1216110:CDS | 45.0% | |
ATGTCGATACCAATTGGTGG+CGG | - | chr8_1:77714929-77714948 | Msa1216110:CDS | 45.0% | |
!! | CAAAAAATGATGGGTGGTGG+AGG | - | chr8_1:77714998-77715017 | Msa1216110:CDS | 45.0% |
!! | GGGTGGTGGAGGAAATAATA+TGG | - | chr8_1:77715048-77715067 | Msa1216110:intron | 45.0% |
CGGTTCATAGGCATACTCAT+TGG | + | chr8_1:77715076-77715095 | None:intergenic | 45.0% | |
GAGTATGCCTATGAACCGAA+TGG | - | chr8_1:77715078-77715097 | Msa1216110:intron | 45.0% | |
TTACCACCCATTCGGTTCAT+AGG | + | chr8_1:77715088-77715107 | None:intergenic | 45.0% | |
CAGGAATGTTACCACCCATT+CGG | + | chr8_1:77715096-77715115 | None:intergenic | 45.0% | |
GGTAACATTCCTGCTGTTCA+AGG | - | chr8_1:77715103-77715122 | Msa1216110:intron | 45.0% | |
TGCTGCTGCTGTTGTTGATA+TGG | + | chr8_1:77715202-77715221 | None:intergenic | 45.0% | |
! | TCATTGGCTGCTGAAATCTC+TGG | + | chr8_1:77715285-77715304 | None:intergenic | 45.0% |
AGCAGCCAATGATGTATGCA+AGG | - | chr8_1:77715293-77715312 | Msa1216110:intron | 45.0% | |
ATGTAATTCACCTCAGGAGG+TGG | + | chr8_1:77715319-77715338 | None:intergenic | 45.0% | |
AAGGATCTGGAGGAGGATAA+GGG | + | chr8_1:77715354-77715373 | None:intergenic | 45.0% | |
TAAGGATCTGGAGGAGGATA+AGG | + | chr8_1:77715355-77715374 | None:intergenic | 45.0% | |
! | TCGCTGAAAGCATGTGAGTA+AGG | + | chr8_1:77715373-77715392 | None:intergenic | 45.0% |
GAATCACATGACATTGCAGC+TGG | + | chr8_1:77715407-77715426 | None:intergenic | 45.0% | |
! | GACCCCCTTTTCATCTTAAG+GGG | - | chr8_1:77715557-77715576 | Msa1216110:five_prime_UTR | 45.0% |
AGAAATGAGCAACCAGAGCT+GGG | + | chr8_1:77715772-77715791 | None:intergenic | 45.0% | |
CAAGGAAAGGTCACGGTTTC+AGG | - | chr8_1:77713996-77714015 | Msa1216110:CDS | 50.0% | |
TGAAGTTGTTGCTGCTGCTG+AGG | + | chr8_1:77714287-77714306 | None:intergenic | 50.0% | |
GAAACCCCCTTCTATGCCTA+TGG | - | chr8_1:77714577-77714596 | Msa1216110:CDS | 50.0% | |
AACCCCCTTCTATGCCTATG+GGG | - | chr8_1:77714579-77714598 | Msa1216110:CDS | 50.0% | |
TTCCCCATAGGCATAGAAGG+GGG | + | chr8_1:77714584-77714603 | None:intergenic | 50.0% | |
CCATTCCCCATAGGCATAGA+AGG | + | chr8_1:77714587-77714606 | None:intergenic | 50.0% | |
CCTTCTATGCCTATGGGGAA+TGG | - | chr8_1:77714584-77714603 | Msa1216110:CDS | 50.0% | |
ATGTGAGCACCATTCCCCAT+AGG | + | chr8_1:77714596-77714615 | None:intergenic | 50.0% | |
GGAAATGGACAGAAACCTGG+TGG | - | chr8_1:77714686-77714705 | Msa1216110:CDS | 50.0% | |
AATGGACAGAAACCTGGTGG+TGG | - | chr8_1:77714689-77714708 | Msa1216110:CDS | 50.0% | |
!! | CCTGTGCCGGTTCAAATTCA+CGG | - | chr8_1:77714722-77714741 | Msa1216110:CDS | 50.0% |
! | CACGGCATGAATGGTGGAAA+TGG | - | chr8_1:77714740-77714759 | Msa1216110:CDS | 50.0% |
GGCAATGGAGGAAAGAAAGG+TGG | - | chr8_1:77714761-77714780 | Msa1216110:CDS | 50.0% | |
!! | GGTGGTGGAAACAAGAATGG+AGG | - | chr8_1:77714863-77714882 | Msa1216110:CDS | 50.0% |
!! | AAAATGATGGGTGGTGGAGG+TGG | - | chr8_1:77715001-77715020 | Msa1216110:CDS | 50.0% |
TCTCATCCTGGTAGTATGGG+TGG | - | chr8_1:77715031-77715050 | Msa1216110:CDS | 50.0% | |
ATGCCTATGAACCGAATGGG+TGG | - | chr8_1:77715082-77715101 | Msa1216110:intron | 50.0% | |
TCCTGCTGTTCAAGGTCTAC+CGG | - | chr8_1:77715111-77715130 | Msa1216110:intron | 50.0% | |
! | GGAGGAGGTTACTTTCAAGG+TGG | - | chr8_1:77715139-77715158 | Msa1216110:intron | 50.0% |
! | GGAGGTTACTTTCAAGGTGG+TGG | - | chr8_1:77715142-77715161 | Msa1216110:intron | 50.0% |
! | GGTTACTTTCAAGGTGGTGG+TGG | - | chr8_1:77715145-77715164 | Msa1216110:intron | 50.0% |
!! | TACTTTCAAGGTGGTGGTGG+TGG | - | chr8_1:77715148-77715167 | Msa1216110:intron | 50.0% |
GGATTCCCCTGCATCATTTC+CGG | + | chr8_1:77715181-77715200 | None:intergenic | 50.0% | |
GCAGCAGCAGCAACAGTTAA+TGG | - | chr8_1:77715213-77715232 | Msa1216110:CDS | 50.0% | |
! | GAACCAACAACGTGCTGCTA+TGG | - | chr8_1:77715249-77715268 | Msa1216110:CDS | 50.0% |
! | GGTGGCCTTGCATACATCAT+TGG | + | chr8_1:77715301-77715320 | None:intergenic | 50.0% |
TCTGGAGGAGGATAAGGGTA+AGG | + | chr8_1:77715349-77715368 | None:intergenic | 50.0% | |
TGTGAGTAAGGATCTGGAGG+AGG | + | chr8_1:77715361-77715380 | None:intergenic | 50.0% | |
GCATGTGAGTAAGGATCTGG+AGG | + | chr8_1:77715364-77715383 | None:intergenic | 50.0% | |
GAGAAATGAGCAACCAGAGC+TGG | + | chr8_1:77715773-77715792 | None:intergenic | 50.0% | |
GGTCACGGTTTCAGGGAATG+TGG | - | chr8_1:77714004-77714023 | Msa1216110:CDS | 55.0% | |
!! | TTCTGATTCGGGTTCTGGCC+CGG | + | chr8_1:77714401-77714420 | None:intergenic | 55.0% |
!! | AATGGTGGTGGTGGCGGAAA+TGG | - | chr8_1:77714671-77714690 | Msa1216110:CDS | 55.0% |
GGCGGAAATGGACAGAAACC+TGG | - | chr8_1:77714683-77714702 | Msa1216110:CDS | 55.0% | |
CCGTGAATTTGAACCGGCAC+AGG | + | chr8_1:77714725-77714744 | None:intergenic | 55.0% | |
! | GGAGGAAAGAAAGGTGGTGG+TGG | - | chr8_1:77714767-77714786 | Msa1216110:CDS | 55.0% |
!! | GGAAAGAAAGGTGGTGGTGG+TGG | - | chr8_1:77714770-77714789 | Msa1216110:CDS | 55.0% |
!! | AAGAAAGGTGGTGGTGGTGG+TGG | - | chr8_1:77714773-77714792 | Msa1216110:CDS | 55.0% |
!! | TCGATACCAATTGGTGGCGG+AGG | - | chr8_1:77714932-77714951 | Msa1216110:CDS | 55.0% |
!! | ATACCAATTGGTGGCGGAGG+TGG | - | chr8_1:77714935-77714954 | Msa1216110:CDS | 55.0% |
! | AGGCGGTGGTGGTAATGTTC+AGG | - | chr8_1:77714958-77714977 | Msa1216110:CDS | 55.0% |
! | GGTGGTGGTCAATCTCATCC+TGG | - | chr8_1:77715019-77715038 | Msa1216110:CDS | 55.0% |
CATCCTGGTAGTATGGGTGG+TGG | - | chr8_1:77715034-77715053 | Msa1216110:CDS | 55.0% | |
! | GGCGGAGGAGGTTACTTTCA+AGG | - | chr8_1:77715136-77715155 | Msa1216110:intron | 55.0% |
TCCAGGACCGGAAATGATGC+AGG | - | chr8_1:77715171-77715190 | Msa1216110:intron | 55.0% | |
CCAGGACCGGAAATGATGCA+GGG | - | chr8_1:77715172-77715191 | Msa1216110:intron | 55.0% | |
CAGGACCGGAAATGATGCAG+GGG | - | chr8_1:77715173-77715192 | Msa1216110:intron | 55.0% | |
CCACCATAGCAGCACGTTGT+TGG | + | chr8_1:77715255-77715274 | None:intergenic | 55.0% | |
! | CCAACAACGTGCTGCTATGG+TGG | - | chr8_1:77715252-77715271 | Msa1216110:CDS | 55.0% |
GGAGGAGGATAAGGGTAAGG+AGG | + | chr8_1:77715346-77715365 | None:intergenic | 55.0% | |
!! | TTCTGGCCCGGGTGCTGATT+CGG | + | chr8_1:77714389-77714408 | None:intergenic | 60.0% |
!! | TCTGATTCGGGTTCTGGCCC+GGG | + | chr8_1:77714400-77714419 | None:intergenic | 60.0% |
!! | GGACAGAAACCTGGTGGTGG+TGG | - | chr8_1:77714692-77714711 | Msa1216110:CDS | 60.0% |
!! | CAGAAACCTGGTGGTGGTGG+TGG | - | chr8_1:77714695-77714714 | Msa1216110:CDS | 60.0% |
!! | AAACCTGGTGGTGGTGGTGG+AGG | - | chr8_1:77714698-77714717 | Msa1216110:CDS | 60.0% |
!! | AAAGGTGGTGGTGGTGGTGG+AGG | - | chr8_1:77714776-77714795 | Msa1216110:CDS | 60.0% |
!! | AAGGTGGTGGTGGTGGTGGA+GGG | - | chr8_1:77714777-77714796 | Msa1216110:CDS | 60.0% |
!! | ATGATGGGTGGTGGAGGTGG+TGG | - | chr8_1:77715004-77715023 | Msa1216110:CDS | 60.0% |
CCTCCACCACCCATACTACC+AGG | + | chr8_1:77715040-77715059 | None:intergenic | 60.0% | |
! | CCTGGTAGTATGGGTGGTGG+AGG | - | chr8_1:77715037-77715056 | Msa1216110:CDS | 60.0% |
GCCGGTAGACCTTGAACAGC+AGG | + | chr8_1:77715115-77715134 | None:intergenic | 60.0% | |
GCTGTTCAAGGTCTACCGGC+AGG | - | chr8_1:77715115-77715134 | Msa1216110:intron | 60.0% | |
GTTCAAGGTCTACCGGCAGG+CGG | - | chr8_1:77715118-77715137 | Msa1216110:intron | 60.0% | |
AAGTAACCTCCTCCGCCTGC+CGG | + | chr8_1:77715133-77715152 | None:intergenic | 60.0% | |
CCCTGCATCATTTCCGGTCC+TGG | + | chr8_1:77715175-77715194 | None:intergenic | 60.0% | |
GTATGCAAGGCCACCTCCTG+AGG | - | chr8_1:77715306-77715325 | Msa1216110:intron | 60.0% | |
GATGCCGCCGAATCAGCACC+CGG | - | chr8_1:77714379-77714398 | Msa1216110:CDS | 65.0% | |
ATGCCGCCGAATCAGCACCC+GGG | - | chr8_1:77714380-77714399 | Msa1216110:CDS | 65.0% | |
!! | TGGTGGTGGAGGACCTGTGC+CGG | - | chr8_1:77714709-77714728 | Msa1216110:CDS | 65.0% |
CCTCCACCTCCGCCACCAAT+TGG | + | chr8_1:77714941-77714960 | None:intergenic | 65.0% | |
!! | CCAATTGGTGGCGGAGGTGG+AGG | - | chr8_1:77714938-77714957 | Msa1216110:CDS | 65.0% |
!! | ATTGGTGGCGGAGGTGGAGG+CGG | - | chr8_1:77714941-77714960 | Msa1216110:CDS | 65.0% |
!! | CAAGGTGGTGGTGGTGGTCC+AGG | - | chr8_1:77715154-77715173 | Msa1216110:intron | 65.0% |
!! | TGGTGGTGGTGGTCCAGGAC+CGG | - | chr8_1:77715159-77715178 | Msa1216110:intron | 65.0% |
!! | TGGCCCGGGTGCTGATTCGG+CGG | + | chr8_1:77714386-77714405 | None:intergenic | 70.0% |
GGTCCTCCACCACCACCACC+AGG | + | chr8_1:77714704-77714723 | None:intergenic | 70.0% | |
CAAGGTCTACCGGCAGGCGG+AGG | - | chr8_1:77715121-77715140 | Msa1216110:intron | 70.0% | |
GGTCTACCGGCAGGCGGAGG+AGG | - | chr8_1:77715124-77715143 | Msa1216110:intron | 75.0% | |
!!! | GGTGGCGGAGGTGGAGGCGG+TGG | - | chr8_1:77714944-77714963 | Msa1216110:CDS | 80.0% |
! | GGCGGAGGTGGAGGCGGTGG+TGG | - | chr8_1:77714947-77714966 | Msa1216110:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_1 | gene | 77713199 | 77715826 | 77713199 | ID=Msa1216110;Name=Msa1216110 |
chr8_1 | mRNA | 77713199 | 77715826 | 77713199 | ID=Msa1216110-mRNA-1;Parent=Msa1216110;Name=Msa1216110-mRNA-1;_AED=0.03;_eAED=0.03;_QI=381|1|1|1|1|1|3|403|520 |
chr8_1 | exon | 77713199 | 77715058 | 77713199 | ID=Msa1216110-mRNA-1:exon:26848;Parent=Msa1216110-mRNA-1 |
chr8_1 | exon | 77715206 | 77715281 | 77715206 | ID=Msa1216110-mRNA-1:exon:26847;Parent=Msa1216110-mRNA-1 |
chr8_1 | exon | 77715416 | 77715826 | 77715416 | ID=Msa1216110-mRNA-1:exon:26846;Parent=Msa1216110-mRNA-1 |
chr8_1 | five_prime_UTR | 77715446 | 77715826 | 77715446 | ID=Msa1216110-mRNA-1:five_prime_utr;Parent=Msa1216110-mRNA-1 |
chr8_1 | CDS | 77715416 | 77715445 | 77715416 | ID=Msa1216110-mRNA-1:cds;Parent=Msa1216110-mRNA-1 |
chr8_1 | CDS | 77715206 | 77715281 | 77715206 | ID=Msa1216110-mRNA-1:cds;Parent=Msa1216110-mRNA-1 |
chr8_1 | CDS | 77713602 | 77715058 | 77713602 | ID=Msa1216110-mRNA-1:cds;Parent=Msa1216110-mRNA-1 |
chr8_1 | three_prime_UTR | 77713199 | 77713601 | 77713199 | ID=Msa1216110-mRNA-1:three_prime_utr;Parent=Msa1216110-mRNA-1 |
Gene Sequence |
Protein sequence |