Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0284830 | XP_039686433.1 | 94.853 | 272 | 14 | 0 | 1 | 272 | 1 | 272 | 0.0 | 523 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0284830 | sp|Q9CAZ7|SSL5_ARATH | 33.588 | 262 | 159 | 6 | 19 | 269 | 20 | 277 | 1.90e-44 | 157 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0139900 | Msa0284830 | 0.806275 | 8.904527e-50 | -8.615850e-47 |
| Msa0203160 | Msa0284830 | 0.834957 | 2.219371e-56 | -8.615850e-47 |
| Msa0274780 | Msa0284830 | 0.800583 | 1.346475e-48 | -8.615850e-47 |
| Msa0284830 | Msa0289890 | 0.808444 | 3.087331e-50 | -8.615850e-47 |
| Msa0284830 | Msa0603680 | 0.804556 | 2.041237e-49 | -8.615850e-47 |
| Msa0284830 | Msa0716790 | 0.802732 | 4.878806e-49 | -8.615850e-47 |
| Msa0284830 | Msa0833040 | 0.805916 | 1.059437e-49 | -8.615850e-47 |
| Msa0284830 | Msa0873190 | 0.802772 | 4.788079e-49 | -8.615850e-47 |
| Msa0284830 | Msa0906370 | 0.804750 | 1.859243e-49 | -8.615850e-47 |
| Msa0284830 | Msa0938430 | 0.810637 | 1.044242e-50 | -8.615850e-47 |
| Msa0284830 | Msa1018790 | 0.814619 | 1.405148e-51 | -8.615850e-47 |
| Msa0284830 | Msa1055260 | 0.805059 | 1.602223e-49 | -8.615850e-47 |
| Msa0284830 | Msa1055280 | 0.802920 | 4.462245e-49 | -8.615850e-47 |
| Msa0284830 | Msa1254190 | 0.810326 | 1.218829e-50 | -8.615850e-47 |
| Msa0284830 | Msa1420060 | 0.800359 | 1.495549e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0284830 | MtrunA17_Chr2g0300841 | 94.853 | 272 | 14 | 0 | 1 | 272 | 1 | 272 | 0.0 | 523 |
| Msa0284830 | MtrunA17_Chr2g0300851 | 92.453 | 265 | 16 | 2 | 8 | 272 | 4 | 264 | 0.0 | 505 |
| Msa0284830 | MtrunA17_Chr2g0300861 | 88.679 | 265 | 29 | 1 | 8 | 272 | 20 | 283 | 1.22e-171 | 478 |
| Msa0284830 | MtrunA17_Chr8g0370791 | 36.364 | 264 | 160 | 7 | 10 | 268 | 22 | 282 | 9.74e-54 | 178 |
| Msa0284830 | MtrunA17_Chr8g0370761 | 36.364 | 264 | 160 | 7 | 10 | 268 | 22 | 282 | 7.25e-51 | 171 |
| Msa0284830 | MtrunA17_Chr8g0370771 | 39.726 | 146 | 87 | 1 | 123 | 268 | 3 | 147 | 1.06e-34 | 125 |
| Msa0284830 | MtrunA17_Chr4g0025341 | 38.372 | 172 | 104 | 2 | 98 | 268 | 128 | 298 | 1.13e-30 | 118 |
| Msa0284830 | MtrunA17_Chr2g0329531 | 33.166 | 199 | 125 | 5 | 77 | 268 | 117 | 314 | 4.23e-29 | 114 |
| Msa0284830 | MtrunA17_Chr7g0256591 | 38.608 | 158 | 93 | 3 | 114 | 268 | 136 | 292 | 7.27e-29 | 113 |
| Msa0284830 | MtrunA17_Chr7g0256601 | 37.975 | 158 | 94 | 3 | 114 | 268 | 167 | 323 | 9.36e-28 | 110 |
| Msa0284830 | MtrunA17_Chr2g0322241 | 36.076 | 158 | 99 | 2 | 112 | 268 | 146 | 302 | 6.56e-26 | 105 |
| Msa0284830 | MtrunA17_Chr7g0256571 | 28.522 | 291 | 172 | 10 | 1 | 268 | 1 | 278 | 1.01e-25 | 104 |
| Msa0284830 | MtrunA17_Chr7g0256561 | 31.858 | 226 | 131 | 6 | 65 | 268 | 58 | 282 | 1.78e-24 | 100 |
| Msa0284830 | MtrunA17_Chr4g0062001 | 34.568 | 162 | 103 | 3 | 112 | 271 | 110 | 270 | 6.05e-24 | 99.0 |
| Msa0284830 | MtrunA17_Chr8g0376581 | 30.488 | 246 | 138 | 9 | 51 | 268 | 25 | 265 | 2.44e-23 | 97.1 |
| Msa0284830 | MtrunA17_Chr7g0256581 | 29.123 | 285 | 162 | 9 | 10 | 268 | 8 | 278 | 4.20e-22 | 94.4 |
| Msa0284830 | MtrunA17_Chr5g0443561 | 32.673 | 202 | 125 | 4 | 77 | 268 | 73 | 273 | 1.92e-21 | 91.7 |
| Msa0284830 | MtrunA17_Chr4g0062031 | 29.707 | 239 | 135 | 8 | 65 | 273 | 39 | 274 | 5.96e-21 | 90.5 |
| Msa0284830 | MtrunA17_Chr8g0370801 | 34.286 | 105 | 65 | 1 | 124 | 224 | 3 | 107 | 2.06e-20 | 84.0 |
| Msa0284830 | MtrunA17_Chr4g0020271 | 34.921 | 126 | 80 | 2 | 147 | 271 | 1 | 125 | 3.85e-20 | 85.9 |
| Msa0284830 | MtrunA17_Chr4g0062021 | 29.237 | 236 | 135 | 7 | 62 | 268 | 49 | 281 | 4.49e-20 | 88.2 |
| Msa0284830 | MtrunA17_Chr2g0307721 | 33.333 | 159 | 100 | 5 | 114 | 268 | 120 | 276 | 3.93e-19 | 87.0 |
| Msa0284830 | MtrunA17_Chr2g0307721 | 33.121 | 157 | 99 | 5 | 116 | 268 | 574 | 728 | 1.06e-15 | 77.0 |
| Msa0284830 | MtrunA17_Chr4g0061871 | 39.286 | 84 | 50 | 1 | 185 | 268 | 31 | 113 | 4.99e-14 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0284830 | AT3G51430.1 | 33.588 | 262 | 159 | 6 | 19 | 269 | 20 | 277 | 1.93e-45 | 157 |
| Msa0284830 | AT3G51430.2 | 33.835 | 266 | 161 | 6 | 19 | 273 | 20 | 281 | 2.03e-45 | 157 |
| Msa0284830 | AT3G51440.1 | 34.483 | 261 | 156 | 6 | 19 | 268 | 20 | 276 | 2.22e-44 | 154 |
| Msa0284830 | AT3G51420.1 | 32.353 | 272 | 167 | 7 | 10 | 270 | 13 | 278 | 2.40e-43 | 151 |
| Msa0284830 | AT3G51450.1 | 32.616 | 279 | 167 | 8 | 5 | 268 | 4 | 276 | 9.95e-42 | 147 |
| Msa0284830 | AT3G59530.3 | 31.208 | 298 | 164 | 11 | 11 | 268 | 20 | 316 | 1.50e-32 | 123 |
| Msa0284830 | AT3G59530.2 | 31.208 | 298 | 164 | 11 | 11 | 268 | 20 | 316 | 1.50e-32 | 123 |
| Msa0284830 | AT3G59530.1 | 31.208 | 298 | 164 | 11 | 11 | 268 | 20 | 316 | 1.50e-32 | 123 |
| Msa0284830 | AT3G57020.2 | 31.905 | 210 | 135 | 7 | 65 | 268 | 54 | 261 | 3.88e-27 | 108 |
| Msa0284830 | AT5G22020.3 | 30.303 | 264 | 154 | 6 | 29 | 268 | 45 | 302 | 6.13e-27 | 108 |
| Msa0284830 | AT5G22020.1 | 30.303 | 264 | 154 | 6 | 29 | 268 | 45 | 302 | 6.13e-27 | 108 |
| Msa0284830 | AT5G22020.2 | 30.303 | 264 | 154 | 6 | 29 | 268 | 45 | 302 | 6.13e-27 | 108 |
| Msa0284830 | AT1G08470.1 | 34.810 | 158 | 101 | 2 | 112 | 268 | 140 | 296 | 4.26e-26 | 105 |
| Msa0284830 | AT3G57030.1 | 37.107 | 159 | 97 | 3 | 112 | 268 | 124 | 281 | 6.90e-26 | 105 |
| Msa0284830 | AT3G57020.1 | 34.132 | 167 | 104 | 5 | 106 | 268 | 111 | 275 | 3.44e-25 | 103 |
| Msa0284830 | AT3G57010.1 | 34.375 | 160 | 100 | 4 | 112 | 268 | 119 | 276 | 1.58e-24 | 101 |
| Msa0284830 | AT2G41290.1 | 35.088 | 171 | 102 | 5 | 106 | 268 | 113 | 282 | 4.66e-22 | 94.7 |
| Msa0284830 | AT2G41300.1 | 32.530 | 166 | 108 | 4 | 106 | 268 | 136 | 300 | 2.37e-21 | 92.8 |
| Msa0284830 | AT1G74010.1 | 28.947 | 228 | 138 | 6 | 65 | 269 | 38 | 264 | 7.12e-20 | 87.8 |
| Msa0284830 | AT1G74000.1 | 25.764 | 229 | 145 | 7 | 65 | 269 | 41 | 268 | 1.98e-16 | 78.2 |
| Msa0284830 | AT1G74020.1 | 24.891 | 229 | 147 | 7 | 65 | 269 | 39 | 266 | 4.42e-14 | 71.6 |
Find 67 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTTTAATAGCACTTATTT+TGG | 0.128314 | 2_3:+23820460 | Msa0284830:three_prime_UTR |
| CCAATTGTGCATACCAAATT+TGG | 0.147851 | 2_3:-23819963 | None:intergenic |
| TTCCAGTGTAATTGGATCTA+TGG | 0.223832 | 2_3:-23817063 | None:intergenic |
| GAATGGTTAGGAATGGAAAT+TGG | 0.237351 | 2_3:+23817322 | Msa0284830:CDS |
| GAAGGAATTTCCAGTGTAAT+TGG | 0.239320 | 2_3:-23817071 | None:intergenic |
| CGTTATTGTCCTTGATGATT+TGG | 0.257134 | 2_3:+23820054 | Msa0284830:CDS |
| GTTATCCTTTCACAAGTAAA+TGG | 0.270520 | 2_3:+23817567 | Msa0284830:CDS |
| CACGATATAATCTTCATCTT+TGG | 0.286547 | 2_3:-23820101 | None:intergenic |
| GCCAAAATAAGTGCTATTAA+AGG | 0.287254 | 2_3:-23820461 | Msa0284840:intron |
| TTGCTCCTGATGGCTCATTC+TGG | 0.309987 | 2_3:+23820370 | Msa0284830:CDS |
| AGTGTTCCAAGTACCAAATT+TGG | 0.315709 | 2_3:+23819950 | Msa0284830:CDS |
| TGTCTGAAACATTGGCTAAA+AGG | 0.318273 | 2_3:+23820282 | Msa0284830:CDS |
| GGAATGGAAATTGGGAGAAT+TGG | 0.337340 | 2_3:+23817331 | Msa0284830:CDS |
| CCAAATTTGGTATGCACAAT+TGG | 0.339387 | 2_3:+23819963 | Msa0284830:CDS |
| CCAAAATAAGTGCTATTAAA+GGG | 0.348798 | 2_3:-23820460 | Msa0284840:intron |
| TGCATACCAAATTTGGTACT+TGG | 0.353785 | 2_3:-23819956 | None:intergenic |
| TTATCCACACAAACATCTTC+GGG | 0.371527 | 2_3:-23817255 | None:intergenic |
| ATTCTGGATCGCTTTAATTC+AGG | 0.374953 | 2_3:+23820386 | Msa0284830:CDS |
| GATTTAGGTGTCTGAAACAT+TGG | 0.389467 | 2_3:+23820274 | Msa0284830:intron |
| TGGTATGCACAATTGGTATC+TGG | 0.390581 | 2_3:+23819970 | Msa0284830:CDS |
| TTTATCCACACAAACATCTT+CGG | 0.393609 | 2_3:-23817256 | None:intergenic |
| CATCTCTTGTAGCTGTATAT+AGG | 0.394546 | 2_3:-23817287 | None:intergenic |
| ATAGATAGCTCTTCTTTGCT+TGG | 0.400675 | 2_3:+23817360 | Msa0284830:CDS |
| GGAGCAAGATTAATGTTATC+AGG | 0.407899 | 2_3:-23820354 | Msa0284840:intron |
| AATGGTTAGGAATGGAAATT+GGG | 0.437047 | 2_3:+23817323 | Msa0284830:CDS |
| TTTATTGAAAACCTTCCAGC+TGG | 0.472305 | 2_3:+23820330 | Msa0284830:CDS |
| CTAAAGGTTACAGAAGAAGA+TGG | 0.472505 | 2_3:+23817537 | Msa0284830:CDS |
| CATGCTTGCTCAGTTACTCT+TGG | 0.475959 | 2_3:-23816961 | None:intergenic |
| ATATCGTGGTTTGTGAAACT+TGG | 0.481259 | 2_3:+23820116 | Msa0284830:CDS |
| TCCAGTGTAATTGGATCTAT+GGG | 0.482722 | 2_3:-23817062 | None:intergenic |
| GATGGATTAAAAGAATGGTT+AGG | 0.485012 | 2_3:+23817310 | Msa0284830:CDS |
| CAAAATAAGTGCTATTAAAG+GGG | 0.486533 | 2_3:-23820459 | Msa0284840:intron |
| AACATTAATCTTGCTCCTGA+TGG | 0.489893 | 2_3:+23820360 | Msa0284830:CDS |
| GAGAACCATTTACTTGTGAA+AGG | 0.496653 | 2_3:-23817572 | None:intergenic |
| AGATGGATGGATTAAAAGAA+TGG | 0.501826 | 2_3:+23817305 | Msa0284830:CDS |
| GCGATCCAGAATGAGCCATC+AGG | 0.509038 | 2_3:-23820375 | Msa0284840:intron |
| GATGATTTGGCCTTTGCCAA+TGG | 0.513304 | 2_3:+23820067 | Msa0284830:CDS |
| TAACAGAAAGTGATTAAACT+TGG | 0.522162 | 2_3:+23817213 | Msa0284830:intron |
| TTTGATCAAAACCTCAAGCT+TGG | 0.522434 | 2_3:+23816992 | Msa0284830:CDS |
| TTTGGACAGTGCAACACCAT+TGG | 0.529499 | 2_3:-23820083 | None:intergenic |
| CAAATCATCAAGGACAATAA+CGG | 0.530113 | 2_3:-23820053 | None:intergenic |
| ATTAAAAGAATGGTTAGGAA+TGG | 0.537267 | 2_3:+23817315 | Msa0284830:CDS |
| CTATATACAGCTACAAGAGA+TGG | 0.549844 | 2_3:+23817288 | Msa0284830:CDS |
| CAAGAGTAACTGAGCAAGCA+TGG | 0.552934 | 2_3:+23816962 | Msa0284830:exon |
| AAAGTGATTAAACTTGGAGA+AGG | 0.557723 | 2_3:+23817219 | Msa0284830:CDS |
| GAAGTTGAAGATGCAGCAGA+AGG | 0.562477 | 2_3:-23817089 | None:intergenic |
| AGCTGCTAGCACCAAGCTTG+AGG | 0.565489 | 2_3:-23817003 | None:intergenic |
| TGTTATCAGGTCCAGCTGGA+AGG | 0.568452 | 2_3:-23820341 | Msa0284840:intron |
| GGAATCACTACATCTAAAGA+TGG | 0.570283 | 2_3:+23817381 | Msa0284830:CDS |
| TTAATGTTATCAGGTCCAGC+TGG | 0.572564 | 2_3:-23820345 | Msa0284840:intron |
| CATTGTCTGTGATGCTACCA+AGG | 0.585980 | 2_3:+23817410 | Msa0284830:CDS |
| ACCCATAGATCCAATTACAC+TGG | 0.587326 | 2_3:+23817061 | Msa0284830:CDS |
| GTGCTTGAGGCAAGACCACA+TGG | 0.588367 | 2_3:+23819995 | Msa0284830:CDS |
| TGGCAAAGGCCAAATCATCA+AGG | 0.590889 | 2_3:-23820063 | None:intergenic |
| GATGTAATAGAAGCATCAGA+TGG | 0.591553 | 2_3:+23819914 | Msa0284830:CDS |
| ATACAGCTACAAGAGATGGA+TGG | 0.599082 | 2_3:+23817292 | Msa0284830:CDS |
| ATAACGGTTTCATTTGACAT+GGG | 0.603716 | 2_3:-23820037 | None:intergenic |
| AATAACGGTTTCATTTGACA+TGG | 0.605627 | 2_3:-23820038 | None:intergenic |
| CAGTGCAACACCATTGGCAA+AGG | 0.613191 | 2_3:-23820077 | None:intergenic |
| TACCTTAAAAGTTGTCCATG+TGG | 0.628210 | 2_3:-23820010 | None:intergenic |
| AAAATAAGTGCTATTAAAGG+GGG | 0.630577 | 2_3:-23820458 | Msa0284840:intron |
| TGGCTAAAAGGTATTAACAA+AGG | 0.633072 | 2_3:+23820294 | Msa0284830:CDS |
| CTTAAATTATAAGCAAAATG+TGG | 0.638439 | 2_3:-23816899 | None:intergenic |
| ATCACTACATCTAAAGATGG+TGG | 0.642182 | 2_3:+23817384 | Msa0284830:CDS |
| CAAAGATGAAGATTATATCG+TGG | 0.647875 | 2_3:+23820102 | Msa0284830:CDS |
| TTGGTATCTGGATGTGCTTG+AGG | 0.671766 | 2_3:+23819982 | Msa0284830:CDS |
| ACAACCCGAAGATGTTTGTG+TGG | 0.703460 | 2_3:+23817251 | Msa0284830:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATATATTTTTTGAAAACT+CGG | - | chr2_3:23818406-23818425 | None:intergenic | 10.0% |
| !!! | TCTTTAAATATAATTTTAGA+TGG | + | chr2_3:23818569-23818588 | Msa0284830:intron | 10.0% |
| !!! | ATTAATTTTATTATCCTTAA+AGG | + | chr2_3:23819256-23819275 | Msa0284830:intron | 10.0% |
| !!! | TTCAAACAATATTATTTTAA+GGG | + | chr2_3:23819340-23819359 | Msa0284830:intron | 10.0% |
| !! | TCAATAAAAATTAATGTCTT+TGG | - | chr2_3:23816879-23816898 | None:intergenic | 15.0% |
| !!! | ATTTTGCTTATAATTTAAGA+CGG | + | chr2_3:23816903-23816922 | Msa0284830:five_prime_UTR | 15.0% |
| !! | AAAAAAATTATGAAAGTTAC+AGG | - | chr2_3:23817449-23817468 | None:intergenic | 15.0% |
| !!! | ATAATTTTTTTTTTACCAAC+AGG | + | chr2_3:23817458-23817477 | Msa0284830:intron | 15.0% |
| !!! | AAAAAACAAACTTACTTTTT+TGG | + | chr2_3:23818488-23818507 | Msa0284830:intron | 15.0% |
| !! | TATATTTAAAGAATGTTTCA+AGG | - | chr2_3:23818561-23818580 | None:intergenic | 15.0% |
| !!! | CGTTTTTTTTTTTTTTAAAG+TGG | + | chr2_3:23819108-23819127 | Msa0284830:intron | 15.0% |
| !! | TACAATGATCATTAATAAAA+GGG | + | chr2_3:23819303-23819322 | Msa0284830:intron | 15.0% |
| !!! | CTTCAAACAATATTATTTTA+AGG | + | chr2_3:23819339-23819358 | Msa0284830:intron | 15.0% |
| !! | ACATCAAATTACAAAATTTA+AGG | - | chr2_3:23819586-23819605 | None:intergenic | 15.0% |
| !!! | TAAACAATTTTTTTTACAGA+GGG | + | chr2_3:23819645-23819664 | Msa0284830:intron | 15.0% |
| !! | CTTAAATTATAAGCAAAATG+TGG | - | chr2_3:23816902-23816921 | None:intergenic | 20.0% |
| !!! | ATAAAATTTTCACCTGTAAT+TGG | - | chr2_3:23817130-23817149 | None:intergenic | 20.0% |
| !!! | ATACATATTATTTTGAACAC+TGG | - | chr2_3:23817165-23817184 | None:intergenic | 20.0% |
| !!! | AATCATGCAGTATTTTATAT+TGG | - | chr2_3:23817485-23817504 | None:intergenic | 20.0% |
| !! | TAGAGATGAATTATTTGTTT+GGG | - | chr2_3:23817611-23817630 | None:intergenic | 20.0% |
| !!! | TATTGTGTAATATTCTTTTG+AGG | - | chr2_3:23817791-23817810 | None:intergenic | 20.0% |
| !! | GAAGTTATCAATTTAATTCT+AGG | + | chr2_3:23817904-23817923 | Msa0284830:intron | 20.0% |
| !!! | GATCTACTAAACAAATTTTT+TGG | - | chr2_3:23818687-23818706 | None:intergenic | 20.0% |
| !!! | TAACTGATAAATTTTTATGC+AGG | + | chr2_3:23818770-23818789 | Msa0284830:intron | 20.0% |
| !! | CTCATTATAATTATCCTTTA+AGG | - | chr2_3:23819273-23819292 | None:intergenic | 20.0% |
| !! | GTACAATGATCATTAATAAA+AGG | + | chr2_3:23819302-23819321 | Msa0284830:intron | 20.0% |
| !! | ACAATGATCATTAATAAAAG+GGG | + | chr2_3:23819304-23819323 | Msa0284830:intron | 20.0% |
| !!! | TAAACAATTTTTTTACAGAG+AGG | - | chr2_3:23819410-23819429 | None:intergenic | 20.0% |
| !!! | AATTTGAAGATTTTTGGTTT+TGG | + | chr2_3:23819444-23819463 | Msa0284830:intron | 20.0% |
| !!! | CTAAACAATTTTTTTTACAG+AGG | + | chr2_3:23819644-23819663 | Msa0284830:intron | 20.0% |
| !!! | AAACAATTTTTTTTACAGAG+GGG | + | chr2_3:23819646-23819665 | Msa0284830:intron | 20.0% |
| !! | ACACAAAACAGTTAAAATAA+GGG | - | chr2_3:23819716-23819735 | None:intergenic | 20.0% |
| !! | AATCACTTTCTGTTATGTTT+TGG | - | chr2_3:23817208-23817227 | None:intergenic | 25.0% |
| ! | TAACAGAAAGTGATTAAACT+TGG | + | chr2_3:23817213-23817232 | Msa0284830:intron | 25.0% |
| ! | ATTAAAAGAATGGTTAGGAA+TGG | + | chr2_3:23817315-23817334 | Msa0284830:CDS | 25.0% |
| ! | GTAGAGATGAATTATTTGTT+TGG | - | chr2_3:23817612-23817631 | None:intergenic | 25.0% |
| ! | ATTACACAATATTGTTGATG+AGG | + | chr2_3:23817800-23817819 | Msa0284830:intron | 25.0% |
| !!! | ATTTATTCTGAGATTCATGT+TGG | - | chr2_3:23818129-23818148 | None:intergenic | 25.0% |
| ! | AATGTTTCAAGGATATTCAT+TGG | - | chr2_3:23818550-23818569 | None:intergenic | 25.0% |
| !!! | TGAGTGTTTTAAAGACATTA+AGG | + | chr2_3:23818732-23818751 | Msa0284830:intron | 25.0% |
| !!! | TATGCAGGAAAATTACTTTT+TGG | + | chr2_3:23818785-23818804 | Msa0284830:intron | 25.0% |
| ! | AAAAGACCAAATATCTTTCA+TGG | - | chr2_3:23818953-23818972 | None:intergenic | 25.0% |
| ! | ACGATAATTTAAATGAGAGA+GGG | - | chr2_3:23819091-23819110 | None:intergenic | 25.0% |
| ! | AACGATAATTTAAATGAGAG+AGG | - | chr2_3:23819092-23819111 | None:intergenic | 25.0% |
| ! | TTTCTAAACACTTATTGTAC+TGG | - | chr2_3:23819168-23819187 | None:intergenic | 25.0% |
| ! | ATCAAAGATCGAAAACAATT+AGG | + | chr2_3:23819191-23819210 | Msa0284830:intron | 25.0% |
| ! | CCAAAAATCTTCAAATTACA+GGG | - | chr2_3:23819441-23819460 | None:intergenic | 25.0% |
| ! | ACCAAAAATCTTCAAATTAC+AGG | - | chr2_3:23819442-23819461 | None:intergenic | 25.0% |
| ! | TTTGTAATTTGATGTCATGA+AGG | + | chr2_3:23819591-23819610 | Msa0284830:intron | 25.0% |
| ! | TCCAAAATCTTCAAATTACA+GGG | + | chr2_3:23819614-23819633 | Msa0284830:intron | 25.0% |
| ! | GACACAAAACAGTTAAAATA+AGG | - | chr2_3:23819717-23819736 | None:intergenic | 25.0% |
| !! | CTGTTTTGTGTCAATAAATT+TGG | + | chr2_3:23819725-23819744 | Msa0284830:intron | 25.0% |
| !!! | TTCTAATTTTTTAGTGAACC+AGG | + | chr2_3:23819882-23819901 | Msa0284830:intron | 25.0% |
| !! | GTTTTTCATGAATCAGATTT+AGG | + | chr2_3:23820259-23820278 | Msa0284830:intron | 25.0% |
| !! | AAAATAAGTGCTATTAAAGG+GGG | - | chr2_3:23820461-23820480 | Msa0284840:intron | 25.0% |
| !! | CAAAATAAGTGCTATTAAAG+GGG | - | chr2_3:23820462-23820481 | Msa0284840:intron | 25.0% |
| !! | CCAAAATAAGTGCTATTAAA+GGG | - | chr2_3:23820463-23820482 | Msa0284840:intron | 25.0% |
| ATCCAAAAACAACCAATTAC+AGG | + | chr2_3:23817115-23817134 | Msa0284830:CDS | 30.0% | |
| AAAGTGATTAAACTTGGAGA+AGG | + | chr2_3:23817219-23817238 | Msa0284830:CDS | 30.0% | |
| TTTATCCACACAAACATCTT+CGG | - | chr2_3:23817259-23817278 | None:intergenic | 30.0% | |
| GATGTTTGTGTGGATAAAAA+TGG | + | chr2_3:23817261-23817280 | Msa0284830:CDS | 30.0% | |
| !! | AGATGGATGGATTAAAAGAA+TGG | + | chr2_3:23817305-23817324 | Msa0284830:CDS | 30.0% |
| !! | GATGGATTAAAAGAATGGTT+AGG | + | chr2_3:23817310-23817329 | Msa0284830:CDS | 30.0% |
| AATGGTTAGGAATGGAAATT+GGG | + | chr2_3:23817323-23817342 | Msa0284830:CDS | 30.0% | |
| ! | GTATTTTATATTGGACCTGT+TGG | - | chr2_3:23817476-23817495 | None:intergenic | 30.0% |
| GTTATCCTTTCACAAGTAAA+TGG | + | chr2_3:23817567-23817586 | Msa0284830:CDS | 30.0% | |
| !!! | CATTTTAACTCCTTGGTAAA+AGG | - | chr2_3:23817686-23817705 | None:intergenic | 30.0% |
| ! | CTTTTACCAAGGAGTTAAAA+TGG | + | chr2_3:23817684-23817703 | Msa0284830:intron | 30.0% |
| TTTATTGTCACAACGTCATT+AGG | + | chr2_3:23817840-23817859 | Msa0284830:intron | 30.0% | |
| ACCAATCTCTAACACAAAAT+AGG | + | chr2_3:23817879-23817898 | Msa0284830:intron | 30.0% | |
| ! | TCCTATTTTGTGTTAGAGAT+TGG | - | chr2_3:23817883-23817902 | None:intergenic | 30.0% |
| AGAGAAAACAAAAACTCTGA+AGG | - | chr2_3:23819009-23819028 | None:intergenic | 30.0% | |
| CGATAATTTAAATGAGAGAG+GGG | - | chr2_3:23819090-23819109 | None:intergenic | 30.0% | |
| !!! | TTTTTTACAGAGAGGTAAAC+CGG | - | chr2_3:23819402-23819421 | None:intergenic | 30.0% |
| AAATCTTCAAATTACAGGGT+TGG | - | chr2_3:23819618-23819637 | None:intergenic | 30.0% | |
| ! | CCCTGTAATTTGAAGATTTT+TGG | + | chr2_3:23819438-23819457 | Msa0284830:intron | 30.0% |
| TGTACGGTAAAAATTCATGA+AGG | - | chr2_3:23819471-23819490 | None:intergenic | 30.0% | |
| CCTGTAATTTGAGAGAATTT+CGG | - | chr2_3:23819552-23819571 | None:intergenic | 30.0% | |
| CGAAATTCTCTCAAATTACA+GGG | + | chr2_3:23819550-23819569 | Msa0284830:intron | 30.0% | |
| GAAATTCTCTCAAATTACAG+GGG | + | chr2_3:23819551-23819570 | Msa0284830:intron | 30.0% | |
| AAATTCTCTCAAATTACAGG+GGG | + | chr2_3:23819552-23819571 | Msa0284830:intron | 30.0% | |
| GTCCAAAATCTTCAAATTAC+AGG | + | chr2_3:23819613-23819632 | Msa0284830:intron | 30.0% | |
| ! | ACCCTGTAATTTGAAGATTT+TGG | - | chr2_3:23819437-23819456 | None:intergenic | 30.0% |
| AAATCTTCAAATTACAGGGT+TGG | + | chr2_3:23819618-23819637 | Msa0284830:intron | 30.0% | |
| ! | AATTTGGTAGCCTTAAGAAA+AGG | + | chr2_3:23819741-23819760 | Msa0284830:intron | 30.0% |
| ATAACGGTTTCATTTGACAT+GGG | - | chr2_3:23820040-23820059 | None:intergenic | 30.0% | |
| AATAACGGTTTCATTTGACA+TGG | - | chr2_3:23820041-23820060 | None:intergenic | 30.0% | |
| CAAATCATCAAGGACAATAA+CGG | - | chr2_3:23820056-23820075 | None:intergenic | 30.0% | |
| CACGATATAATCTTCATCTT+TGG | - | chr2_3:23820104-23820123 | None:intergenic | 30.0% | |
| CAAAGATGAAGATTATATCG+TGG | + | chr2_3:23820102-23820121 | Msa0284830:CDS | 30.0% | |
| !! | TGGCTAAAAGGTATTAACAA+AGG | + | chr2_3:23820294-23820313 | Msa0284830:CDS | 30.0% |
| ! | CCCTTTAATAGCACTTATTT+TGG | + | chr2_3:23820460-23820479 | Msa0284830:three_prime_UTR | 30.0% |
| ! | GCCAAAATAAGTGCTATTAA+AGG | - | chr2_3:23820464-23820483 | Msa0284840:intron | 30.0% |
| !! | GCTTGAGGTTTTGATCAAAT+TGG | - | chr2_3:23816991-23817010 | None:intergenic | 35.0% |
| TTTGATCAAAACCTCAAGCT+TGG | + | chr2_3:23816992-23817011 | Msa0284830:CDS | 35.0% | |
| TCCAGTGTAATTGGATCTAT+GGG | - | chr2_3:23817065-23817084 | None:intergenic | 35.0% | |
| TTCCAGTGTAATTGGATCTA+TGG | - | chr2_3:23817066-23817085 | None:intergenic | 35.0% | |
| GAAGGAATTTCCAGTGTAAT+TGG | - | chr2_3:23817074-23817093 | None:intergenic | 35.0% | |
| !! | CACCTGTAATTGGTTGTTTT+TGG | - | chr2_3:23817120-23817139 | None:intergenic | 35.0% |
| TTATCCACACAAACATCTTC+GGG | - | chr2_3:23817258-23817277 | None:intergenic | 35.0% | |
| CATCTCTTGTAGCTGTATAT+AGG | - | chr2_3:23817290-23817309 | None:intergenic | 35.0% | |
| CTATATACAGCTACAAGAGA+TGG | + | chr2_3:23817288-23817307 | Msa0284830:CDS | 35.0% | |
| GAATGGTTAGGAATGGAAAT+TGG | + | chr2_3:23817322-23817341 | Msa0284830:CDS | 35.0% | |
| ATAGATAGCTCTTCTTTGCT+TGG | + | chr2_3:23817360-23817379 | Msa0284830:CDS | 35.0% | |
| GGAATCACTACATCTAAAGA+TGG | + | chr2_3:23817381-23817400 | Msa0284830:CDS | 35.0% | |
| ATCACTACATCTAAAGATGG+TGG | + | chr2_3:23817384-23817403 | Msa0284830:CDS | 35.0% | |
| CAGGCTTGATTTAATTACCT+TGG | - | chr2_3:23817430-23817449 | None:intergenic | 35.0% | |
| CTAAAGGTTACAGAAGAAGA+TGG | + | chr2_3:23817537-23817556 | Msa0284830:CDS | 35.0% | |
| GAGAACCATTTACTTGTGAA+AGG | - | chr2_3:23817575-23817594 | None:intergenic | 35.0% | |
| ! | TGCACATTTACCTTTTACCA+AGG | + | chr2_3:23817673-23817692 | Msa0284830:intron | 35.0% |
| !!! | CTTTCTCCATTTTAACTCCT+TGG | - | chr2_3:23817693-23817712 | None:intergenic | 35.0% |
| ATGACGTTGTGACAATAAAG+AGG | - | chr2_3:23817839-23817858 | None:intergenic | 35.0% | |
| ! | TTGTGTTAGAGATTGGTTCA+AGG | - | chr2_3:23817876-23817895 | None:intergenic | 35.0% |
| !! | TGCTTTTGACGTATTTCTGT+AGG | + | chr2_3:23817965-23817984 | Msa0284830:intron | 35.0% |
| !! | TTTCACAACTTGCTGAAAGT+TGG | + | chr2_3:23818084-23818103 | Msa0284830:intron | 35.0% |
| CAATAATCGACTAATCCGAA+GGG | - | chr2_3:23818374-23818393 | None:intergenic | 35.0% | |
| !! | GGATTAGTCGATTATTGGAT+CGG | + | chr2_3:23818377-23818396 | Msa0284830:intron | 35.0% |
| !!! | GCATAACCTTAGTTTTAACG+CGG | - | chr2_3:23818709-23818728 | None:intergenic | 35.0% |
| CACTGACCATGAAAGATATT+TGG | + | chr2_3:23818944-23818963 | Msa0284830:intron | 35.0% | |
| ! | AAGTTGCATGGTGCATTTTA+CGG | + | chr2_3:23819032-23819051 | Msa0284830:intron | 35.0% |
| !! | GTACTGGTTGACACTTATTA+TGG | - | chr2_3:23819152-23819171 | None:intergenic | 35.0% |
| GAAATCACTAACATTACAGG+GGG | - | chr2_3:23819380-23819399 | None:intergenic | 35.0% | |
| GGAAATCACTAACATTACAG+GGG | - | chr2_3:23819381-23819400 | None:intergenic | 35.0% | |
| CGGAAATCACTAACATTACA+GGG | - | chr2_3:23819382-23819401 | None:intergenic | 35.0% | |
| CCTGTAATGTTAGTGATTTC+CGG | + | chr2_3:23819380-23819399 | Msa0284830:intron | 35.0% | |
| ACCGTACAAAATCGATGATA+TGG | + | chr2_3:23819483-23819502 | Msa0284830:intron | 35.0% | |
| !!! | GCCATATCATCGATTTTGTA+CGG | - | chr2_3:23819487-23819506 | None:intergenic | 35.0% |
| TACAAAATCGATGATATGGC+AGG | + | chr2_3:23819487-23819506 | Msa0284830:intron | 35.0% | |
| ACAAAATCGATGATATGGCA+GGG | + | chr2_3:23819488-23819507 | Msa0284830:intron | 35.0% | |
| AAACCGAAATATCGACGATA+TGG | + | chr2_3:23819514-23819533 | Msa0284830:intron | 35.0% | |
| CTACCATATCGTCGATATTT+CGG | - | chr2_3:23819520-23819539 | None:intergenic | 35.0% | |
| GAAATATCGACGATATGGTA+GGG | + | chr2_3:23819519-23819538 | Msa0284830:intron | 35.0% | |
| AAATATCGACGATATGGTAG+GGG | + | chr2_3:23819520-23819539 | Msa0284830:intron | 35.0% | |
| CCGAAATTCTCTCAAATTAC+AGG | + | chr2_3:23819549-23819568 | Msa0284830:intron | 35.0% | |
| !!! | TTTTTTACAGAGGGGTAAAC+CGG | + | chr2_3:23819654-23819673 | Msa0284830:intron | 35.0% |
| CCTGTAATATTAGCGATTTC+CGG | - | chr2_3:23819676-23819695 | None:intergenic | 35.0% | |
| CGGAAATCGCTAATATTACA+GGG | + | chr2_3:23819674-23819693 | Msa0284830:intron | 35.0% | |
| GGAAATCGCTAATATTACAG+GGG | + | chr2_3:23819675-23819694 | Msa0284830:intron | 35.0% | |
| GAAATCGCTAATATTACAGG+GGG | + | chr2_3:23819676-23819695 | Msa0284830:intron | 35.0% | |
| TATTACATCATCTGCAAACC+TGG | - | chr2_3:23819903-23819922 | None:intergenic | 35.0% | |
| !! | GATGTAATAGAAGCATCAGA+TGG | + | chr2_3:23819914-23819933 | Msa0284830:CDS | 35.0% |
| AGTGTTCCAAGTACCAAATT+TGG | + | chr2_3:23819950-23819969 | Msa0284830:CDS | 35.0% | |
| TGCATACCAAATTTGGTACT+TGG | - | chr2_3:23819959-23819978 | None:intergenic | 35.0% | |
| CCAATTGTGCATACCAAATT+TGG | - | chr2_3:23819966-23819985 | None:intergenic | 35.0% | |
| CCAAATTTGGTATGCACAAT+TGG | + | chr2_3:23819963-23819982 | Msa0284830:CDS | 35.0% | |
| TACCTTAAAAGTTGTCCATG+TGG | - | chr2_3:23820013-23820032 | None:intergenic | 35.0% | |
| ! | CGTTATTGTCCTTGATGATT+TGG | + | chr2_3:23820054-23820073 | Msa0284830:CDS | 35.0% |
| ! | ATATCGTGGTTTGTGAAACT+TGG | + | chr2_3:23820116-23820135 | Msa0284830:CDS | 35.0% |
| ! | GATTTAGGTGTCTGAAACAT+TGG | + | chr2_3:23820274-23820293 | Msa0284830:intron | 35.0% |
| ! | TGTCTGAAACATTGGCTAAA+AGG | + | chr2_3:23820282-23820301 | Msa0284830:CDS | 35.0% |
| TTTATTGAAAACCTTCCAGC+TGG | + | chr2_3:23820330-23820349 | Msa0284830:CDS | 35.0% | |
| GGAGCAAGATTAATGTTATC+AGG | - | chr2_3:23820357-23820376 | Msa0284840:intron | 35.0% | |
| AACATTAATCTTGCTCCTGA+TGG | + | chr2_3:23820360-23820379 | Msa0284830:CDS | 35.0% | |
| ATTCTGGATCGCTTTAATTC+AGG | + | chr2_3:23820386-23820405 | Msa0284830:CDS | 35.0% | |
| ACCCATAGATCCAATTACAC+TGG | + | chr2_3:23817061-23817080 | Msa0284830:CDS | 40.0% | |
| ATACAGCTACAAGAGATGGA+TGG | + | chr2_3:23817292-23817311 | Msa0284830:CDS | 40.0% | |
| GGAATGGAAATTGGGAGAAT+TGG | + | chr2_3:23817331-23817350 | Msa0284830:CDS | 40.0% | |
| TGCAAAATGTAACGACGTGT+CGG | - | chr2_3:23817510-23817529 | None:intergenic | 40.0% | |
| ! | ACACGTCGTTACATTTTGCA+GGG | + | chr2_3:23817510-23817529 | Msa0284830:intron | 40.0% |
| !!! | CATTTTGCAGGGTTTGCTAA+AGG | + | chr2_3:23817521-23817540 | Msa0284830:intron | 40.0% |
| CAAGTAGTGTTCATATGTGG+TGG | - | chr2_3:23817720-23817739 | None:intergenic | 40.0% | |
| GCTCAAGTAGTGTTCATATG+TGG | - | chr2_3:23817723-23817742 | None:intergenic | 40.0% | |
| GCAAGTTGTGAAACGTTTGT+CGG | - | chr2_3:23818077-23818096 | None:intergenic | 40.0% | |
| TAACTCAAGCTCAACCCATT+TGG | + | chr2_3:23818241-23818260 | Msa0284830:intron | 40.0% | |
| AACTCAAGCTCAACCCATTT+GGG | + | chr2_3:23818242-23818261 | Msa0284830:intron | 40.0% | |
| ! | ATTCCATCTGGTGCCAATTT+CGG | + | chr2_3:23818338-23818357 | Msa0284830:intron | 40.0% |
| CCAATAATCGACTAATCCGA+AGG | - | chr2_3:23818375-23818394 | None:intergenic | 40.0% | |
| !! | CCTTCGGATTAGTCGATTAT+TGG | + | chr2_3:23818372-23818391 | Msa0284830:intron | 40.0% |
| GTAGATCCGCGTTAAAACTA+AGG | + | chr2_3:23818700-23818719 | Msa0284830:intron | 40.0% | |
| ! | CTTGTGAAGTGTCTTGCTTA+AGG | + | chr2_3:23818904-23818923 | Msa0284830:intron | 40.0% |
| ! | TGAAGTGTCTTGCTTAAGGT+GGG | + | chr2_3:23818908-23818927 | Msa0284830:intron | 40.0% |
| !!! | ATCGGTTTTTGGGTGCATTT+CGG | - | chr2_3:23818976-23818995 | None:intergenic | 40.0% |
| !!! | CAAAGCACTGATCGGTTTTT+GGG | - | chr2_3:23818986-23819005 | None:intergenic | 40.0% |
| ! | GTTTTCTCTTGCAAGTTGCA+TGG | + | chr2_3:23819020-23819039 | Msa0284830:intron | 40.0% |
| CCGGAAATCACTAACATTAC+AGG | - | chr2_3:23819383-23819402 | None:intergenic | 40.0% | |
| CAAAATCGATGATATGGCAG+GGG | + | chr2_3:23819489-23819508 | Msa0284830:intron | 40.0% | |
| AAAATCGATGATATGGCAGG+GGG | + | chr2_3:23819490-23819509 | Msa0284830:intron | 40.0% | |
| CGAAATATCGACGATATGGT+AGG | + | chr2_3:23819518-23819537 | Msa0284830:intron | 40.0% | |
| AATATCGACGATATGGTAGG+GGG | + | chr2_3:23819521-23819540 | Msa0284830:intron | 40.0% | |
| CCGGAAATCGCTAATATTAC+AGG | + | chr2_3:23819673-23819692 | Msa0284830:intron | 40.0% | |
| GTGTTTGCAACATTTGAGCA+GGG | - | chr2_3:23819769-23819788 | None:intergenic | 40.0% | |
| AGTGTTTGCAACATTTGAGC+AGG | - | chr2_3:23819770-23819789 | None:intergenic | 40.0% | |
| TGGTATGCACAATTGGTATC+TGG | + | chr2_3:23819970-23819989 | Msa0284830:CDS | 40.0% | |
| ! | GACCACATGGACAACTTTTA+AGG | + | chr2_3:23820008-23820027 | Msa0284830:CDS | 40.0% |
| TTAATGTTATCAGGTCCAGC+TGG | - | chr2_3:23820348-23820367 | Msa0284840:intron | 40.0% | |
| CATGCTTGCTCAGTTACTCT+TGG | - | chr2_3:23816964-23816983 | None:intergenic | 45.0% | |
| CAAGAGTAACTGAGCAAGCA+TGG | + | chr2_3:23816962-23816981 | Msa0284830:exon | 45.0% | |
| GAAGTTGAAGATGCAGCAGA+AGG | - | chr2_3:23817092-23817111 | None:intergenic | 45.0% | |
| ACAACCCGAAGATGTTTGTG+TGG | + | chr2_3:23817251-23817270 | Msa0284830:CDS | 45.0% | |
| CATTGTCTGTGATGCTACCA+AGG | + | chr2_3:23817410-23817429 | Msa0284830:CDS | 45.0% | |
| ! | GACACGTCGTTACATTTTGC+AGG | + | chr2_3:23817509-23817528 | Msa0284830:intron | 45.0% |
| ACTCAAGCTCAACCCATTTG+GGG | + | chr2_3:23818243-23818262 | Msa0284830:intron | 45.0% | |
| !! | GTTTCAGGTTCGATTCCATC+TGG | + | chr2_3:23818326-23818345 | Msa0284830:intron | 45.0% |
| ! | GTGAAGTGTCTTGCTTAAGG+TGG | + | chr2_3:23818907-23818926 | Msa0284830:intron | 45.0% |
| !!! | GCAAAGCACTGATCGGTTTT+TGG | - | chr2_3:23818987-23819006 | None:intergenic | 45.0% |
| !! | TCTGAAGGCAAAGCACTGAT+CGG | - | chr2_3:23818994-23819013 | None:intergenic | 45.0% |
| !! | GAGCAGGGTACCTTTTCTTA+AGG | - | chr2_3:23819754-23819773 | None:intergenic | 45.0% |
| TTGGTATCTGGATGTGCTTG+AGG | + | chr2_3:23819982-23820001 | Msa0284830:CDS | 45.0% | |
| TGGCAAAGGCCAAATCATCA+AGG | - | chr2_3:23820066-23820085 | None:intergenic | 45.0% | |
| ! | GATGATTTGGCCTTTGCCAA+TGG | + | chr2_3:23820067-23820086 | Msa0284830:CDS | 45.0% |
| TTTGGACAGTGCAACACCAT+TGG | - | chr2_3:23820086-23820105 | None:intergenic | 45.0% | |
| !!! | ATTATATATATATTTTTGTT+TGG | - | chr2_3:23817745-23817764 | None:intergenic | 5.0% |
| ! | AAGCTCAACCCATTTGGGGT+TGG | + | chr2_3:23818247-23818266 | Msa0284830:intron | 50.0% |
| AAGATCCCAAGCCAACCACT+AGG | - | chr2_3:23818273-23818292 | None:intergenic | 50.0% | |
| !! | TAGTGGTTGGCTTGGGATCT+TGG | + | chr2_3:23818272-23818291 | Msa0284830:intron | 50.0% |
| ATCGAACCTGAAACCTCTGG+AGG | - | chr2_3:23818320-23818339 | None:intergenic | 50.0% | |
| GGAATCGAACCTGAAACCTC+TGG | - | chr2_3:23818323-23818342 | None:intergenic | 50.0% | |
| GGTGCCAATTTCGGTGGAAT+TGG | + | chr2_3:23818347-23818366 | Msa0284830:intron | 50.0% | |
| GGGACCAATTCCACCGAAAT+TGG | - | chr2_3:23818354-23818373 | None:intergenic | 50.0% | |
| TTCGGTGGAATTGGTCCCTT+CGG | + | chr2_3:23818356-23818375 | Msa0284830:intron | 50.0% | |
| TTAAGGTGGGACCAGAGAGT+AGG | + | chr2_3:23818921-23818940 | Msa0284830:intron | 50.0% | |
| CAGTGCAACACCATTGGCAA+AGG | - | chr2_3:23820080-23820099 | None:intergenic | 50.0% | |
| TGTTATCAGGTCCAGCTGGA+AGG | - | chr2_3:23820344-23820363 | Msa0284840:intron | 50.0% | |
| TTGCTCCTGATGGCTCATTC+TGG | + | chr2_3:23820370-23820389 | Msa0284830:CDS | 50.0% | |
| AGCTGCTAGCACCAAGCTTG+AGG | - | chr2_3:23817006-23817025 | None:intergenic | 55.0% | |
| CCACTAGGCCAACCCCAAAT+GGG | - | chr2_3:23818258-23818277 | None:intergenic | 55.0% | |
| ACCACTAGGCCAACCCCAAA+TGG | - | chr2_3:23818259-23818278 | None:intergenic | 55.0% | |
| !! | TTTGGGGTTGGCCTAGTGGT+TGG | + | chr2_3:23818259-23818278 | Msa0284830:intron | 55.0% |
| !! | GTTGGCCTAGTGGTTGGCTT+GGG | + | chr2_3:23818265-23818284 | Msa0284830:intron | 55.0% |
| ! | CTTGGAGTTTGCTCCTCCAG+AGG | + | chr2_3:23818290-23818309 | Msa0284830:intron | 55.0% |
| CCACCGAAATTGGCACCAGA+TGG | - | chr2_3:23818344-23818363 | None:intergenic | 55.0% | |
| ! | CCATCTGGTGCCAATTTCGG+TGG | + | chr2_3:23818341-23818360 | Msa0284830:intron | 55.0% |
| CATGGTCAGTGCCTACTCTC+TGG | - | chr2_3:23818935-23818954 | None:intergenic | 55.0% | |
| GTGCTTGAGGCAAGACCACA+TGG | + | chr2_3:23819995-23820014 | Msa0284830:CDS | 55.0% | |
| GCGATCCAGAATGAGCCATC+AGG | - | chr2_3:23820378-23820397 | Msa0284840:intron | 55.0% | |
| !! | CCCATTTGGGGTTGGCCTAG+TGG | + | chr2_3:23818255-23818274 | Msa0284830:intron | 60.0% |
| !! | GGTTGGCCTAGTGGTTGGCT+TGG | + | chr2_3:23818264-23818283 | Msa0284830:intron | 60.0% |
| !! | AACCTCTGGAGGAGCACCTC+TGG | - | chr2_3:23818309-23818328 | None:intergenic | 60.0% |
| GGTGCTCCTCCAGAGGTTTC+AGG | + | chr2_3:23818311-23818330 | Msa0284830:intron | 60.0% | |
| !! | CTCTGGAGGAGCACCTCTGG+AGG | - | chr2_3:23818306-23818325 | None:intergenic | 65.0% |
| !! | CTCCAGAGGTGCTCCTCCAG+AGG | + | chr2_3:23818304-23818323 | Msa0284830:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 23816876 | 23820512 | 23816876 | ID=Msa0284830;Name=Msa0284830 |
| chr2_3 | mRNA | 23816876 | 23820512 | 23816876 | ID=Msa0284830-mRNA-1;Parent=Msa0284830;Name=Msa0284830-mRNA-1;_AED=0.08;_eAED=0.08;_QI=105|1|1|1|1|0.8|5|93|273 |
| chr2_3 | exon | 23816876 | 23817136 | 23816876 | ID=Msa0284830-mRNA-1:exon:9008;Parent=Msa0284830-mRNA-1 |
| chr2_3 | exon | 23817219 | 23817431 | 23817219 | ID=Msa0284830-mRNA-1:exon:9009;Parent=Msa0284830-mRNA-1 |
| chr2_3 | exon | 23817531 | 23817601 | 23817531 | ID=Msa0284830-mRNA-1:exon:9010;Parent=Msa0284830-mRNA-1 |
| chr2_3 | exon | 23819904 | 23820140 | 23819904 | ID=Msa0284830-mRNA-1:exon:9011;Parent=Msa0284830-mRNA-1 |
| chr2_3 | exon | 23820275 | 23820512 | 23820275 | ID=Msa0284830-mRNA-1:exon:9012;Parent=Msa0284830-mRNA-1 |
| chr2_3 | five_prime_UTR | 23816876 | 23816980 | 23816876 | ID=Msa0284830-mRNA-1:five_prime_utr;Parent=Msa0284830-mRNA-1 |
| chr2_3 | CDS | 23816981 | 23817136 | 23816981 | ID=Msa0284830-mRNA-1:cds;Parent=Msa0284830-mRNA-1 |
| chr2_3 | CDS | 23817219 | 23817431 | 23817219 | ID=Msa0284830-mRNA-1:cds;Parent=Msa0284830-mRNA-1 |
| chr2_3 | CDS | 23817531 | 23817601 | 23817531 | ID=Msa0284830-mRNA-1:cds;Parent=Msa0284830-mRNA-1 |
| chr2_3 | CDS | 23819904 | 23820140 | 23819904 | ID=Msa0284830-mRNA-1:cds;Parent=Msa0284830-mRNA-1 |
| chr2_3 | CDS | 23820275 | 23820419 | 23820275 | ID=Msa0284830-mRNA-1:cds;Parent=Msa0284830-mRNA-1 |
| chr2_3 | three_prime_UTR | 23820420 | 23820512 | 23820420 | ID=Msa0284830-mRNA-1:three_prime_utr;Parent=Msa0284830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
