AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0873190


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0873190 MtrunA17_Chr6g0454341 92.116 482 37 1 1 481 1 482 0.0 931
Msa0873190 MtrunA17_Chr3g0078841 88.589 482 54 1 1 481 1 482 0.0 889
Msa0873190 MtrunA17_Chr8g0336331 85.270 482 69 2 1 481 1 481 0.0 865
Msa0873190 MtrunA17_Chr6g0454321 85.169 472 69 1 1 471 1 472 0.0 850
Msa0873190 MtrunA17_Chr6g0454321 68.852 122 34 2 5 122 499 620 2.89e-48 176
Msa0873190 MtrunA17_Chr6g0454301 82.292 480 84 1 1 479 254 733 0.0 836
Msa0873190 MtrunA17_Chr6g0454301 77.093 227 51 1 249 475 3 228 5.66e-122 373
Msa0873190 MtrunA17_Chr6g0454401 75.670 485 112 3 1 480 1 484 0.0 760
Msa0873190 MtrunA17_Chr6g0454191 74.486 486 118 4 1 481 1 485 0.0 757
Msa0873190 MtrunA17_Chr6g0454181 73.402 485 124 3 1 481 1 484 0.0 753
Msa0873190 MtrunA17_Chr6g0453951 73.196 485 124 4 1 480 47 530 0.0 740
Msa0873190 MtrunA17_Chr6g0454201 76.337 486 109 4 1 481 1 485 0.0 739
Msa0873190 MtrunA17_Chr6g0454361 74.227 485 119 4 1 480 1 484 0.0 731
Msa0873190 MtrunA17_Chr6g0454331 72.521 484 126 3 4 481 1 483 0.0 729
Msa0873190 MtrunA17_Chr8g0359821 72.727 484 127 3 1 481 1 482 0.0 729
Msa0873190 MtrunA17_Chr6g0453961 71.134 485 134 4 1 480 10 493 0.0 718
Msa0873190 MtrunA17_Chr6g0454291 73.542 480 122 3 4 479 1 479 0.0 715
Msa0873190 MtrunA17_Chr6g0454141 69.278 485 144 3 1 481 1 484 0.0 706
Msa0873190 MtrunA17_Chr6g0454211 71.933 481 130 3 5 481 292 771 0.0 706
Msa0873190 MtrunA17_Chr6g0454211 54.857 350 75 4 127 476 1 267 7.91e-112 348
Msa0873190 MtrunA17_Chr6g0454351 69.959 486 122 5 1 480 1 468 0.0 701
Msa0873190 MtrunA17_Chr6g0454261 69.485 485 143 3 1 481 1 484 0.0 698
Msa0873190 MtrunA17_Chr6g0452771 71.488 484 133 3 1 480 1 483 0.0 697
Msa0873190 MtrunA17_Chr6g0454121 69.008 484 146 2 1 481 1 483 0.0 680
Msa0873190 MtrunA17_Chr6g0454151 70.600 483 135 4 1 479 1 480 0.0 673
Msa0873190 MtrunA17_Chr6g0454131 67.081 483 155 2 1 480 1 482 0.0 662
Msa0873190 MtrunA17_Chr5g0423981 67.010 485 118 5 1 480 1 448 0.0 654
Msa0873190 MtrunA17_Chr7g0217881 67.975 484 132 4 1 480 1 465 0.0 652
Msa0873190 MtrunA17_Chr5g0426431 59.322 472 187 5 10 479 12 480 0.0 587
Msa0873190 MtrunA17_Chr6g0454251 69.367 395 116 3 5 395 2 395 0.0 572
Msa0873190 MtrunA17_Chr3g0092641 56.144 472 202 5 9 478 11 479 0.0 560
Msa0873190 MtrunA17_Chr2g0278711 53.669 477 214 3 5 478 6 478 0.0 541
Msa0873190 MtrunA17_Chr3g0118771 51.368 475 226 5 6 477 17 489 0.0 519
Msa0873190 MtrunA17_Chr3g0118711 50.314 477 234 3 3 477 6 481 0.0 518
Msa0873190 MtrunA17_Chr3g0118671 50.211 474 233 3 6 477 2 474 0.0 517
Msa0873190 MtrunA17_Chr3g0118691 49.578 474 236 3 6 477 11 483 5.31e-178 508
Msa0873190 MtrunA17_Chr3g0118701 48.945 474 239 3 6 477 11 483 5.78e-177 505
Msa0873190 MtrunA17_Chr4g0050341 51.483 472 222 4 8 473 17 487 1.47e-174 499
Msa0873190 MtrunA17_Chr3g0118751 48.734 474 211 7 6 477 2 445 4.54e-166 476
Msa0873190 MtrunA17_Chr3g0118661 48.093 472 243 2 6 476 9 479 8.60e-161 464
Msa0873190 MtrunA17_Chr8g0355011 61.892 370 98 2 112 481 40 366 2.76e-160 458
Msa0873190 MtrunA17_Chr6g0454271 71.918 292 81 1 190 481 1 291 3.52e-159 452
Msa0873190 MtrunA17_Chr6g0454221 87.665 227 28 0 249 475 3 229 2.00e-150 431
Msa0873190 MtrunA17_Chr8g0336271 83.265 245 39 2 1 244 1 244 6.37e-149 426
Msa0873190 MtrunA17_Chr6g0454171 60.335 358 93 4 127 480 1 313 1.10e-146 422
Msa0873190 MtrunA17_Chr6g0454231 79.325 237 48 1 1 236 241 477 1.83e-130 386
Msa0873190 MtrunA17_Chr6g0454231 63.424 257 54 4 222 477 2 219 7.76e-103 315
Msa0873190 MtrunA17_Chr5g0426401 58.842 311 123 4 171 478 4 312 1.55e-128 375
Msa0873190 MtrunA17_Chr6g0453981 71.121 232 66 1 127 358 1 231 2.00e-116 341
Msa0873190 MtrunA17_Chr3g0118721 52.759 290 135 2 190 477 1 290 7.54e-108 322
Msa0873190 MtrunA17_Chr6g0454371 81.034 174 33 0 307 480 1 174 9.37e-103 304
Msa0873190 MtrunA17_Chr6g0453941 66.063 221 73 2 130 349 56 275 1.49e-93 285
Msa0873190 MtrunA17_Chr6g0453941 37.500 184 72 7 6 161 7 175 4.54e-22 95.9
Msa0873190 MtrunA17_Chr6g0454281 68.205 195 58 2 1 191 1 195 8.69e-93 280
Msa0873190 MtrunA17_Chr3g0112771 35.518 473 264 14 12 477 14 452 3.04e-91 285
Msa0873190 MtrunA17_Chr5g0412111 33.613 476 290 13 9 476 4 461 1.76e-86 273
Msa0873190 MtrunA17_Chr5g0412131 34.310 478 285 12 9 476 11 469 5.14e-85 269
Msa0873190 MtrunA17_Chr8g0336261 86.765 136 18 0 307 442 1 136 7.59e-85 257
Msa0873190 MtrunA17_Chr3g0112761 33.966 474 272 13 12 477 10 450 3.56e-81 259
Msa0873190 MtrunA17_Chr5g0412101 33.473 478 290 11 9 476 11 470 3.84e-81 259
Msa0873190 MtrunA17_Chr7g0218811 33.689 469 271 11 9 473 14 446 4.16e-77 248
Msa0873190 MtrunA17_Chr4g0032331 32.479 468 271 12 12 468 10 443 1.95e-76 246
Msa0873190 MtrunA17_Chr7g0218831 32.278 474 270 12 9 473 5 436 2.41e-76 246
Msa0873190 MtrunA17_Chr1g0207981 31.148 488 291 12 10 478 13 474 2.65e-76 247
Msa0873190 MtrunA17_Chr6g0464881 31.612 484 290 15 6 480 7 458 1.65e-74 242
Msa0873190 MtrunA17_Chr7g0218821 32.558 473 274 12 9 469 4 443 1.14e-73 239
Msa0873190 MtrunA17_Chr7g0218841 32.623 469 276 9 9 473 5 437 2.21e-72 236
Msa0873190 MtrunA17_Chr7g0218791 31.753 485 275 14 1 473 1 441 3.37e-72 235
Msa0873190 MtrunA17_Chr5g0414331 31.656 477 282 12 6 473 9 450 2.71e-71 233
Msa0873190 MtrunA17_Chr4g0053501 30.722 485 293 15 12 481 13 469 8.47e-70 230
Msa0873190 MtrunA17_Chr3g0098111 29.979 487 295 11 10 476 9 469 2.41e-69 229
Msa0873190 MtrunA17_Chr7g0250001 29.916 478 294 12 8 477 4 448 2.35e-68 226
Msa0873190 MtrunA17_Chr7g0249981 31.277 470 282 15 8 469 23 459 3.41e-68 226
Msa0873190 MtrunA17_Chr4g0053321 31.098 492 298 15 5 481 19 484 4.16e-68 226
Msa0873190 MtrunA17_Chr8g0377921 30.928 485 297 14 9 477 2 464 1.14e-67 224
Msa0873190 MtrunA17_Chr6g0464921 31.524 479 288 15 9 478 10 457 3.69e-67 222
Msa0873190 MtrunA17_Chr5g0414321 30.561 481 290 13 6 477 7 452 5.01e-67 222
Msa0873190 MtrunA17_Chr6g0464871 30.233 473 297 13 6 473 19 463 1.59e-66 221
Msa0873190 MtrunA17_Chr8g0365811 31.098 492 281 16 12 476 497 957 4.68e-66 229
Msa0873190 MtrunA17_Chr8g0365811 30.022 463 276 14 12 450 11 449 7.82e-58 206
Msa0873190 MtrunA17_Chr1g0207971 30.103 485 282 16 10 476 8 453 4.94e-65 217
Msa0873190 MtrunA17_Chr6g0454111 62.346 162 59 2 167 327 23 183 1.29e-64 207
Msa0873190 MtrunA17_Chr1g0161351 30.642 483 297 12 10 476 37 497 1.40e-64 217
Msa0873190 MtrunA17_Chr1g0207861 31.633 490 299 13 1 476 1 468 2.37e-64 216
Msa0873190 MtrunA17_Chr8g0380531 30.591 474 296 14 10 476 10 457 1.38e-63 213
Msa0873190 MtrunA17_Chr5g0426411 54.913 173 74 3 1 170 1 172 2.43e-62 201
Msa0873190 MtrunA17_Chr6g0464841 29.536 474 299 15 6 473 7 451 2.54e-62 209
Msa0873190 MtrunA17_Chr5g0401721 31.200 500 297 18 4 481 1 475 2.65e-62 210
Msa0873190 MtrunA17_Chr6g0464861 30.126 478 290 16 6 473 7 450 1.81e-61 207
Msa0873190 MtrunA17_Chr1g0207951 30.675 489 292 14 5 476 650 1108 2.40e-61 216
Msa0873190 MtrunA17_Chr1g0207951 30.567 494 280 16 5 476 118 570 4.61e-61 216
Msa0873190 MtrunA17_Chr3g0121991 31.707 492 286 18 10 476 79 545 5.88e-61 208
Msa0873190 MtrunA17_Chr7g0243631 28.858 499 298 12 10 476 13 486 7.80e-61 207
Msa0873190 MtrunA17_Chr1g0207931 28.776 490 242 15 10 476 92 497 1.49e-59 204
Msa0873190 MtrunA17_Chr1g0207831 28.542 480 302 10 12 476 10 463 2.66e-59 202
Msa0873190 MtrunA17_Chr3g0122001 32.106 489 289 16 10 476 6 473 4.67e-59 209
Msa0873190 MtrunA17_Chr3g0122001 31.753 485 295 14 10 476 486 952 1.01e-58 208
Msa0873190 MtrunA17_Chr8g0377941 31.301 492 274 16 12 477 9 462 5.86e-59 201
Msa0873190 MtrunA17_Chr7g0243931 28.743 501 306 12 5 476 12 490 1.14e-58 201
Msa0873190 MtrunA17_Chr7g0243951 28.685 502 304 16 5 476 6 483 2.38e-58 200
Msa0873190 MtrunA17_Chr7g0243771 27.823 496 303 13 10 476 6 475 1.77e-57 197
Msa0873190 MtrunA17_Chr3g0106231 31.667 480 271 15 10 477 18 452 7.67e-57 196
Msa0873190 MtrunA17_Chr7g0249931 28.571 476 295 16 5 469 35 476 4.72e-56 194
Msa0873190 MtrunA17_Chr7g0243801 27.163 497 313 13 6 476 3 476 1.13e-55 193
Msa0873190 MtrunA17_Chr7g0243681 27.071 495 307 13 10 476 11 479 4.63e-55 191
Msa0873190 MtrunA17_Chr5g0431361 28.778 483 287 14 10 476 12 453 5.30e-55 190
Msa0873190 MtrunA17_Chr7g0265041 29.273 509 299 16 9 481 10 493 6.17e-55 191
Msa0873190 MtrunA17_Chr5g0393591 29.053 475 273 13 10 476 17 435 8.05e-55 190
Msa0873190 MtrunA17_Chr6g0454381 61.268 142 55 0 127 268 1 142 8.31e-55 180
Msa0873190 MtrunA17_Chr8g0347271 29.032 496 286 15 9 479 18 472 1.13e-54 190
Msa0873190 MtrunA17_Chr6g0462571 30.618 356 208 8 132 472 126 457 5.74e-54 188
Msa0873190 MtrunA17_Chr5g0448551 27.706 462 282 13 7 452 4 429 7.92e-54 187
Msa0873190 MtrunA17_Chr8g0347281 28.571 497 287 15 9 479 17 471 1.55e-53 187
Msa0873190 MtrunA17_Chr5g0431441 29.461 482 293 17 10 477 18 466 2.27e-53 186
Msa0873190 MtrunA17_Chr4g0044511 26.884 491 317 12 6 476 36 504 2.52e-53 187
Msa0873190 MtrunA17_Chr7g0232401 27.515 487 294 12 10 469 6 460 3.30e-53 186
Msa0873190 MtrunA17_Chr7g0232391 28.571 497 286 14 10 475 6 464 1.27e-52 184
Msa0873190 MtrunA17_Chr7g0243861 28.088 502 308 14 5 476 9 487 1.88e-52 184
Msa0873190 MtrunA17_Chr5g0419761 27.324 527 295 17 4 481 3 490 4.65e-52 183
Msa0873190 MtrunA17_Chr6g0462541 30.532 357 206 9 132 472 129 459 7.24e-52 182
Msa0873190 MtrunA17_Chr4g0060511 27.519 516 296 15 5 476 6 487 8.29e-52 182
Msa0873190 MtrunA17_Chr6g0462531 29.980 497 294 19 8 481 2 467 9.52e-52 182
Msa0873190 MtrunA17_Chr7g0275681 30.392 510 281 20 6 477 8 481 9.76e-52 182
Msa0873190 MtrunA17_Chr5g0431401 27.235 481 294 13 10 476 10 448 1.14e-51 181
Msa0873190 MtrunA17_Chr7g0275511 29.065 492 273 17 9 465 14 464 1.17e-51 182
Msa0873190 MtrunA17_Chr7g0265101 28.854 506 303 15 8 479 7 489 1.23e-51 182
Msa0873190 MtrunA17_Chr6g0462521 32.184 348 200 9 136 474 128 448 2.59e-51 180
Msa0873190 MtrunA17_Chr7g0232411 27.767 497 290 14 10 475 6 464 4.71e-51 180
Msa0873190 MtrunA17_Chr1g0173121 28.016 489 286 16 12 476 16 462 4.92e-51 180
Msa0873190 MtrunA17_Chr5g0431421 27.386 482 294 13 10 477 10 449 1.55e-50 178
Msa0873190 MtrunA17_Chr8g0335141 29.109 505 281 20 3 472 2 464 2.40e-50 178
Msa0873190 MtrunA17_Chr1g0153451 29.317 498 283 15 10 479 6 462 2.45e-50 178
Msa0873190 MtrunA17_Chr8g0336691 27.525 505 300 14 3 479 6 472 9.62e-50 183
Msa0873190 MtrunA17_Chr8g0336691 31.536 371 209 9 117 465 1021 1368 2.14e-49 182
Msa0873190 MtrunA17_Chr8g0336691 28.898 481 282 16 10 479 480 911 1.21e-43 165
Msa0873190 MtrunA17_Chr8g0336741 28.343 501 289 15 8 479 11 470 1.24e-49 176
Msa0873190 MtrunA17_Chr6g0449931 29.293 495 279 19 8 469 4 460 1.76e-49 176
Msa0873190 MtrunA17_Chr5g0431371 27.651 481 292 14 10 476 10 448 9.67e-49 173
Msa0873190 MtrunA17_Chr6g0459311 28.081 495 290 15 7 472 10 467 1.05e-48 174
Msa0873190 MtrunA17_Chr5g0427561 85.393 89 13 0 393 481 1 89 1.30e-48 162
Msa0873190 MtrunA17_Chr8g0336651 29.283 502 283 18 10 479 781 1242 1.59e-48 179
Msa0873190 MtrunA17_Chr8g0336651 28.106 491 289 16 10 472 6 460 2.36e-46 173
Msa0873190 MtrunA17_Chr8g0336651 33.700 273 139 7 215 479 535 773 3.88e-38 149
Msa0873190 MtrunA17_Chr7g0232341 27.708 480 278 15 7 455 3 444 4.58e-48 172
Msa0873190 MtrunA17_Chr7g0232331 27.743 483 274 15 7 455 3 444 8.04e-48 171
Msa0873190 MtrunA17_Chr7g0243871 27.984 511 285 20 6 476 5 472 1.28e-47 171
Msa0873190 MtrunA17_Chr8g0336731 29.787 376 223 9 117 473 134 487 1.41e-47 171
Msa0873190 MtrunA17_Chr8g0335161 27.621 496 295 18 6 472 2 462 2.03e-47 170
Msa0873190 MtrunA17_Chr7g0265151 28.169 497 307 17 10 477 9 484 2.06e-47 171
Msa0873190 MtrunA17_Chr4g0011051 28.046 517 298 14 8 481 7 492 2.35e-47 171
Msa0873190 MtrunA17_Chr6g0486251 26.572 493 290 16 12 472 8 460 2.53e-47 170
Msa0873190 MtrunA17_Chr6g0486201 26.572 493 290 16 12 472 8 460 2.53e-47 170
Msa0873190 MtrunA17_Chr5g0419771 27.379 515 290 16 10 477 36 513 6.99e-47 170
Msa0873190 MtrunA17_Chr7g0232311 31.593 364 205 10 130 473 121 460 9.66e-47 168
Msa0873190 MtrunA17_Chr7g0243781 26.653 499 294 17 14 476 13 475 1.37e-46 168
Msa0873190 MtrunA17_Chr5g0440421 26.641 518 315 20 1 477 1 494 2.67e-46 167
Msa0873190 MtrunA17_Chr6g0462551 26.176 489 299 14 12 472 6 460 3.03e-46 167
Msa0873190 MtrunA17_Chr7g0235051 26.494 502 273 14 10 475 11 452 1.28e-45 165
Msa0873190 MtrunA17_Chr7g0265051 28.487 509 299 19 8 479 7 487 1.29e-45 166
Msa0873190 MtrunA17_Chr1g0179901 26.408 515 296 18 10 477 16 494 1.62e-45 166
Msa0873190 MtrunA17_Chr7g0243851 26.946 501 273 15 5 476 6 442 2.13e-45 164
Msa0873190 MtrunA17_Chr8g0373301 29.750 400 232 11 75 452 70 442 2.72e-45 164
Msa0873190 MtrunA17_Chr7g0265141 27.680 513 308 15 1 477 1 486 2.76e-45 165
Msa0873190 MtrunA17_Chr8g0334851 27.479 484 276 16 8 455 4 448 4.19e-45 164
Msa0873190 MtrunA17_Chr5g0432731 31.392 309 183 8 181 477 6 297 5.80e-45 159
Msa0873190 MtrunA17_Chr1g0159551 26.598 485 289 18 15 476 19 459 7.10e-45 163
Msa0873190 MtrunA17_Chr4g0014061 26.613 496 291 14 13 473 12 469 7.36e-45 164
Msa0873190 MtrunA17_Chr5g0428081 27.439 492 301 15 14 476 15 479 1.51e-44 163
Msa0873190 MtrunA17_Chr8g0366391 26.680 491 314 13 10 476 9 477 2.19e-44 162
Msa0873190 MtrunA17_Chr8g0339461 32.329 365 198 10 117 455 109 450 2.79e-44 162
Msa0873190 MtrunA17_Chr7g0243761 25.988 481 305 14 10 476 11 454 9.16e-44 160
Msa0873190 MtrunA17_Chr8g0361371 27.756 508 282 17 7 473 4 467 3.95e-43 159
Msa0873190 MtrunA17_Chr2g0294931 27.163 497 298 18 14 476 15 481 4.20e-43 159
Msa0873190 MtrunA17_Chr3g0106251 32.803 314 179 8 174 477 3 294 4.31e-43 154
Msa0873190 MtrunA17_Chr7g0249961 37.021 235 137 6 240 469 24 252 6.33e-43 153
Msa0873190 MtrunA17_Chr5g0442581 26.459 514 305 15 7 481 2 481 7.62e-43 159
Msa0873190 MtrunA17_Chr8g0339451 30.905 398 216 12 83 455 79 442 8.26e-43 157
Msa0873190 MtrunA17_Chr8g0339631 28.641 412 234 12 83 470 87 462 1.14e-42 157
Msa0873190 MtrunA17_Chr5g0442561 25.249 503 313 16 7 477 2 473 1.18e-42 157
Msa0873190 MtrunA17_Chr8g0336321 29.011 455 287 15 10 450 7 439 2.00e-42 157
Msa0873190 MtrunA17_Chr4g0072771 25.567 485 305 12 7 476 22 465 3.31e-42 156
Msa0873190 MtrunA17_Chr8g0382021 26.653 484 299 13 15 476 39 488 3.51e-42 156
Msa0873190 MtrunA17_Chr8g0339601 32.515 326 171 10 156 455 7 309 5.66e-42 152
Msa0873190 MtrunA17_Chr5g0442541 26.400 500 304 14 7 477 2 466 5.86e-42 155
Msa0873190 MtrunA17_Chr5g0429711 26.749 486 310 14 6 476 7 461 7.79e-42 155
Msa0873190 MtrunA17_Chr5g0442601 26.523 509 303 16 7 477 401 876 1.81e-41 158
Msa0873190 MtrunA17_Chr5g0442601 27.778 342 190 9 89 417 36 333 2.11e-29 122
Msa0873190 MtrunA17_Chr8g0336251 28.791 455 288 15 10 450 7 439 2.47e-41 154
Msa0873190 MtrunA17_Chr4g0066131 26.721 494 289 14 14 473 17 471 3.79e-41 153
Msa0873190 MtrunA17_Chr4g0044501 25.956 497 307 17 10 476 10 475 5.77e-41 153
Msa0873190 MtrunA17_Chr4g0072761 27.406 478 296 14 10 476 15 452 7.14e-41 152
Msa0873190 MtrunA17_Chr8g0334861 26.453 499 298 16 7 475 3 462 1.01e-40 152
Msa0873190 MtrunA17_Chr5g0401851 25.494 506 310 17 8 476 8 483 1.10e-40 152
Msa0873190 MtrunA17_Chr8g0370941 25.641 507 307 16 10 474 8 486 1.23e-40 152
Msa0873190 MtrunA17_Chr5g0442521 24.016 508 308 14 7 473 2 472 1.68e-40 151
Msa0873190 MtrunA17_Chr5g0420801 27.642 492 295 24 5 473 2 455 2.07e-40 151
Msa0873190 MtrunA17_Chr4g0066151 26.434 488 304 11 14 476 22 479 5.61e-40 150
Msa0873190 MtrunA17_Chr3g0079731 25.743 505 299 14 12 474 8 478 8.45e-40 149
Msa0873190 MtrunA17_Chr8g0374931 26.613 496 302 17 14 476 15 481 1.51e-39 149
Msa0873190 MtrunA17_Chr2g0294921 26.869 495 302 17 14 476 164 630 3.69e-39 150
Msa0873190 MtrunA17_Chr5g0442491 24.213 508 314 14 7 477 2 475 4.16e-39 147
Msa0873190 MtrunA17_Chr4g0066221 26.139 505 302 18 14 481 15 485 4.59e-39 147
Msa0873190 MtrunA17_Chr5g0448521 25.247 507 303 14 7 477 2 468 6.80e-39 147
Msa0873190 MtrunA17_Chr6g0466831 28.884 457 279 18 10 453 18 441 1.21e-38 146
Msa0873190 MtrunA17_Chr8g0369341 25.984 508 307 17 4 480 1 470 1.53e-38 146
Msa0873190 MtrunA17_Chr5g0416741 25.203 492 318 16 12 476 15 483 1.90e-38 146
Msa0873190 MtrunA17_Chr2g0329111 25.979 485 302 17 7 462 3 459 2.74e-38 145
Msa0873190 MtrunA17_Chr8g0334831 28.231 503 252 19 7 452 3 453 3.61e-38 145
Msa0873190 MtrunA17_Chr7g0265111 26.877 506 304 20 10 477 39 516 5.21e-38 145
Msa0873190 MtrunA17_Chr7g0218311 27.856 499 289 21 14 476 20 483 6.00e-38 144
Msa0873190 MtrunA17_Chr5g0410941 27.016 496 296 17 14 476 27 489 7.05e-38 144
Msa0873190 MtrunA17_Chr4g0066281 26.789 489 294 16 14 476 16 466 1.03e-37 144
Msa0873190 MtrunA17_Chr1g0165701 25.971 489 318 16 11 476 16 483 1.15e-37 144
Msa0873190 MtrunA17_Chr6g0466841 28.228 457 282 17 10 453 18 441 1.28e-37 143
Msa0873190 MtrunA17_Chr4g0042891 27.778 378 229 13 119 475 110 464 1.36e-37 143
Msa0873190 MtrunA17_Chr8g0355221 25.407 492 320 15 11 476 16 486 3.24e-37 143
Msa0873190 MtrunA17_Chr4g0044521 26.441 503 296 22 6 474 2 464 3.32e-37 142
Msa0873190 MtrunA17_Chr4g0066201 27.381 504 276 21 13 476 21 474 3.65e-37 142
Msa0873190 MtrunA17_Chr5g0403641 31.379 290 159 10 215 475 223 501 3.81e-37 143
Msa0873190 MtrunA17_Chr8g0339441 39.062 192 97 4 284 455 217 408 4.21e-37 141
Msa0873190 MtrunA17_Chr4g0042931 28.163 490 294 17 10 475 7 462 5.24e-37 142
Msa0873190 MtrunA17_Chr5g0429681 28.601 486 298 18 7 473 41 496 6.95e-37 142
Msa0873190 MtrunA17_Chr7g0243611 30.100 299 179 7 129 423 5 277 7.99e-37 137
Msa0873190 MtrunA17_Chr6g0463891 24.850 499 315 17 11 476 13 484 1.95e-36 140
Msa0873190 MtrunA17_Chr5g0416821 24.131 489 316 13 12 476 16 473 2.56e-36 140
Msa0873190 MtrunA17_Chr1g0153461 36.715 207 114 4 283 472 2 208 4.20e-36 133
Msa0873190 MtrunA17_Chr7g0241801 27.826 460 260 17 7 453 6 406 5.28e-36 138
Msa0873190 MtrunA17_Chr8g0374901 25.253 495 308 18 13 476 15 478 3.12e-35 137
Msa0873190 MtrunA17_Chr2g0278721 27.579 475 296 18 1 454 508 955 6.70e-35 139
Msa0873190 MtrunA17_Chr2g0278721 25.319 470 294 16 5 453 10 443 3.80e-29 121
Msa0873190 MtrunA17_Chr6g0463851 24.104 502 310 14 13 476 14 482 7.66e-35 136
Msa0873190 MtrunA17_Chr2g0302991 27.225 382 226 9 118 476 110 462 9.08e-35 135
Msa0873190 MtrunA17_Chr7g0241781 28.200 461 257 18 7 453 6 406 1.01e-34 134
Msa0873190 MtrunA17_Chr5g0442511 23.518 506 293 16 7 476 46 493 1.60e-34 135
Msa0873190 MtrunA17_Chr6g0463861 25.202 496 301 17 14 476 15 473 2.89e-34 134
Msa0873190 MtrunA17_Chr4g0066261 25.100 502 302 17 14 476 15 481 3.41e-34 134
Msa0873190 MtrunA17_Chr2g0307961 25.506 494 315 16 6 478 9 470 3.65e-34 134
Msa0873190 MtrunA17_Chr4g0069611 26.981 467 286 20 5 453 9 438 5.27e-34 133
Msa0873190 MtrunA17_Chr7g0243711 32.780 241 142 7 254 476 78 316 6.10e-34 130
Msa0873190 MtrunA17_Chr2g0302961 24.597 496 314 12 8 476 3 465 7.54e-34 132
Msa0873190 MtrunA17_Chr8g0374941 26.400 500 298 23 13 476 952 1417 9.71e-34 135
Msa0873190 MtrunA17_Chr8g0374941 26.501 483 287 22 13 460 14 463 4.16e-32 130
Msa0873190 MtrunA17_Chr8g0374941 24.948 477 296 17 13 457 479 925 9.60e-31 126
Msa0873190 MtrunA17_Chr6g0482061 25.709 494 313 15 10 475 11 478 1.47e-33 132
Msa0873190 MtrunA17_Chr4g0044481 26.107 429 248 14 10 422 27 402 2.48e-32 128
Msa0873190 MtrunA17_Chr8g0374971 25.051 495 311 17 13 476 15 480 7.98e-32 127
Msa0873190 MtrunA17_Chr7g0243911 35.450 189 105 3 280 451 17 205 8.65e-32 121
Msa0873190 MtrunA17_Chr5g0431431 31.227 269 159 7 181 445 110 356 1.39e-31 124
Msa0873190 MtrunA17_Chr2g0294941 25.956 366 221 12 120 457 17 360 1.81e-31 124
Msa0873190 MtrunA17_Chr5g0427571 31.128 257 167 6 201 450 20 273 2.60e-31 122
Msa0873190 MtrunA17_Chr2g0302851 26.452 465 291 17 5 453 10 439 7.00e-31 124
Msa0873190 MtrunA17_Chr8g0361411 25.451 499 291 18 8 476 6 453 2.31e-30 122
Msa0873190 MtrunA17_Chr4g0066171 25.852 499 295 17 13 480 24 478 2.44e-30 123
Msa0873190 MtrunA17_Chr6g0464091 25.478 471 299 16 3 453 10 448 3.52e-30 122
Msa0873190 MtrunA17_Chr8g0350881 23.952 501 311 17 12 476 14 480 4.19e-30 122
Msa0873190 MtrunA17_Chr7g0243811 25.935 401 236 12 22 402 1 360 7.41e-30 120
Msa0873190 MtrunA17_Chr5g0409591 25.910 467 288 14 13 442 7 452 2.44e-29 120
Msa0873190 MtrunA17_Chr6g0454391 73.846 65 17 0 369 433 11 75 8.73e-29 110
Msa0873190 MtrunA17_Chr1g0207881 41.085 129 70 1 354 476 256 384 1.50e-28 116
Msa0873190 MtrunA17_Chr7g0232351 26.456 412 237 12 10 394 6 378 3.71e-28 115
Msa0873190 MtrunA17_Chr8g0367221 25.597 461 297 16 10 452 798 1230 6.23e-28 118
Msa0873190 MtrunA17_Chr8g0367221 23.644 461 305 15 10 452 12 443 4.29e-26 112
Msa0873190 MtrunA17_Chr8g0367221 25.478 471 285 18 10 452 1288 1720 7.87e-26 112
Msa0873190 MtrunA17_Chr3g0092031 34.286 175 102 5 287 453 6 175 8.35e-28 110
Msa0873190 MtrunA17_Chr7g0250021 27.964 329 210 10 5 331 7 310 1.84e-27 112
Msa0873190 MtrunA17_Chr2g0278741 26.115 471 301 18 1 453 84 525 3.35e-27 114
Msa0873190 MtrunA17_Chr3g0079711 32.432 185 103 5 311 474 3 186 1.04e-26 106
Msa0873190 MtrunA17_Chr8g0337381 41.085 129 66 3 355 479 2 124 1.87e-24 98.6
Msa0873190 MtrunA17_Chr7g0231631 30.603 232 147 6 252 476 35 259 5.14e-24 101
Msa0873190 MtrunA17_Chr3g0118731 41.441 111 64 1 62 172 28 137 2.51e-23 96.3
Msa0873190 MtrunA17_Chr4g0039881 25.169 445 291 17 20 453 2 415 3.58e-23 101
Msa0873190 MtrunA17_Chr1g0196851 23.333 480 288 17 6 453 45 476 1.23e-21 97.8
Msa0873190 MtrunA17_Chr3g0118741 62.069 58 22 0 6 63 2 59 3.76e-21 87.4
Msa0873190 MtrunA17_Chr4g0029131 23.493 481 294 18 6 456 8 444 1.39e-19 92.0
Msa0873190 MtrunA17_Chr4g0066141 33.088 136 77 2 355 476 216 351 6.41e-19 88.2
Msa0873190 MtrunA17_Chr8g0357361 34.752 141 83 3 283 419 116 251 1.26e-18 85.9
Msa0873190 MtrunA17_Chr4g0040691 27.350 234 152 8 259 481 236 462 2.73e-17 84.3
Msa0873190 MtrunA17_Chr6g0454241 75.610 41 10 0 436 476 1 41 1.65e-16 74.3
Msa0873190 MtrunA17_Chr6g0454241 77.500 40 9 0 170 209 39 78 7.09e-16 72.8
Msa0873190 MtrunA17_Chr4g0040711 24.411 467 291 22 10 453 8 435 2.24e-16 81.3
Msa0873190 MtrunA17_Chr4g0029151 27.778 180 117 5 287 453 265 444 1.72e-14 75.5
Msa0873190 MtrunA17_Chr7g0267931 72.973 37 9 1 15 50 25 61 4.48e-14 67.0
Msa0873190 MtrunA17_Chr2g0283041 26.163 172 114 5 287 447 258 427 1.91e-13 72.4
Msa0873190 MtrunA17_Chr7g0243731 38.462 65 40 0 355 419 9 73 4.75e-13 64.7
Msa0873190 MtrunA17_Chr8g0334841 31.875 160 92 5 200 354 11 158 1.00e-12 66.2
Msa0873190 MtrunA17_Chr1g0207911 24.506 253 165 7 12 256 10 244 1.11e-12 68.2
Msa0873190 MtrunA17_Chr2g0319791 28.646 192 123 6 285 464 257 446 1.35e-12 69.7
Msa0873190 MtrunA17_Chr2g0319761 27.869 183 122 5 281 453 253 435 1.39e-12 69.7
Msa0873190 MtrunA17_Chr7g0243721 35.780 109 56 4 229 330 34 135 6.96e-12 63.2
Msa0873190 MtrunA17_Chr5g0442501 24.405 336 209 12 7 331 2 303 7.40e-12 66.2
Msa0873190 MtrunA17_Chr6g0454311 58.824 51 21 0 172 222 6 56 1.48e-11 59.7
Msa0873190 MtrunA17_Chr2g0319751 28.889 180 114 6 285 452 734 911 1.51e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0873190 AT1G22360.1 57.261 482 203 3 1 480 1 481 0.0 590
Msa0873190 AT1G22340.1 55.672 476 207 4 7 479 10 484 0.0 575
Msa0873190 AT1G22360.2 56.017 482 197 4 1 480 1 469 0.0 569
Msa0873190 AT1G22400.1 53.862 479 217 4 6 481 9 486 0.0 560
Msa0873190 AT1G22380.1 54.412 476 214 3 7 480 10 484 0.0 560
Msa0873190 AT1G22370.2 56.067 478 202 4 5 480 8 479 0.0 553
Msa0873190 AT1G78270.1 52.610 479 222 5 2 477 5 481 0.0 528
Msa0873190 AT1G22370.1 55.446 303 133 2 180 480 7 309 2.27e-116 345
Msa0873190 AT5G59590.1 34.172 477 267 12 7 473 7 446 7.02e-87 274
Msa0873190 AT5G59580.1 34.172 477 264 14 8 473 7 444 5.44e-84 266
Msa0873190 AT3G46670.1 32.981 473 272 12 10 473 9 445 5.04e-82 261
Msa0873190 AT3G46660.1 33.898 472 267 15 12 473 16 452 6.63e-79 253
Msa0873190 AT5G38010.1 32.383 491 275 14 1 474 1 451 1.22e-78 253
Msa0873190 AT3G11340.1 31.013 474 288 11 8 477 7 445 5.13e-78 251
Msa0873190 AT2G36970.1 31.124 498 293 14 1 476 1 470 5.79e-78 252
Msa0873190 AT3G55700.1 33.403 476 273 15 12 477 10 451 1.98e-77 249
Msa0873190 AT3G21560.1 31.515 495 285 14 9 479 11 475 2.99e-76 248
Msa0873190 AT3G46690.1 32.770 473 282 13 7 474 6 447 1.14e-74 242
Msa0873190 AT5G05900.1 31.857 474 276 12 10 473 8 444 1.35e-74 242
Msa0873190 AT5G05870.1 31.513 476 288 9 10 476 8 454 1.70e-73 239
Msa0873190 AT5G38040.1 31.398 465 274 12 19 474 19 447 1.16e-72 237
Msa0873190 AT5G05860.1 31.368 475 286 11 10 478 9 449 1.18e-72 237
Msa0873190 AT3G46680.1 30.962 478 280 12 8 473 7 446 1.36e-72 237
Msa0873190 AT4G15490.1 30.909 495 294 14 6 480 4 470 1.99e-72 237
Msa0873190 AT3G46650.1 30.085 472 270 11 8 471 8 427 6.11e-72 234
Msa0873190 AT2G28080.1 32.427 478 286 13 14 479 22 474 9.17e-72 235
Msa0873190 AT4G15500.1 31.762 488 282 14 9 477 8 463 8.69e-71 233
Msa0873190 AT3G46720.1 32.075 477 267 14 8 473 7 437 1.23e-70 231
Msa0873190 AT5G05880.1 29.958 474 286 11 10 473 8 445 9.25e-70 229
Msa0873190 AT3G46700.1 30.689 479 281 14 8 476 7 444 1.48e-69 229
Msa0873190 AT5G05890.1 30.737 475 285 12 10 473 8 449 9.48e-68 224
Msa0873190 AT4G15480.1 30.785 484 294 13 10 476 19 478 1.41e-67 224
Msa0873190 AT1G05680.1 30.591 474 293 11 10 477 6 449 4.26e-67 223
Msa0873190 AT3G55710.1 33.125 480 273 18 12 477 10 455 5.43e-67 223
Msa0873190 AT3G02100.1 30.675 489 290 16 1 473 1 456 6.70e-67 222
Msa0873190 AT1G05675.1 30.462 476 287 11 10 473 6 449 1.07e-66 221
Msa0873190 AT2G31750.1 29.707 478 300 12 8 477 6 455 1.29e-66 221
Msa0873190 AT2G31750.2 29.707 478 300 12 8 477 6 455 2.63e-66 221
Msa0873190 AT2G43840.2 29.583 480 295 12 8 479 5 449 4.23e-65 217
Msa0873190 AT2G43840.1 29.375 480 296 12 8 479 5 449 4.93e-64 214
Msa0873190 AT2G26480.1 28.660 485 293 14 7 479 5 448 1.44e-63 213
Msa0873190 AT2G43820.1 29.461 482 297 14 6 479 3 449 3.05e-62 209
Msa0873190 AT2G23260.1 31.557 488 291 17 1 478 1 455 5.03e-61 206
Msa0873190 AT2G31790.1 30.165 484 286 13 7 473 5 453 8.18e-61 206
Msa0873190 AT4G01070.1 31.062 499 273 15 6 472 4 463 2.45e-60 205
Msa0873190 AT2G23250.1 32.135 473 274 17 13 476 1 435 2.79e-60 204
Msa0873190 AT1G05560.1 27.515 487 295 15 9 476 4 451 3.63e-57 197
Msa0873190 AT2G36790.1 31.881 505 278 17 10 477 13 488 4.03e-57 197
Msa0873190 AT1G05560.2 27.515 487 295 15 9 476 54 501 1.28e-56 196
Msa0873190 AT2G36800.1 30.297 505 287 17 10 477 12 488 1.82e-56 195
Msa0873190 AT2G15490.3 29.878 492 299 13 10 476 7 477 4.58e-55 191
Msa0873190 AT2G15480.1 29.341 501 308 13 1 476 1 480 5.64e-55 191
Msa0873190 AT4G15550.1 28.834 489 298 15 9 475 12 472 5.92e-55 191
Msa0873190 AT1G01420.1 31.440 493 272 16 9 472 7 462 1.64e-54 190
Msa0873190 AT2G15490.1 29.697 495 299 13 10 476 7 480 1.67e-54 190
Msa0873190 AT1G01420.2 31.440 493 272 16 9 472 10 465 1.76e-54 190
Msa0873190 AT1G05530.1 28.221 489 296 17 8 477 3 455 2.22e-54 189
Msa0873190 AT2G30140.1 29.253 482 291 15 6 476 9 451 5.22e-54 188
Msa0873190 AT2G30140.2 29.253 482 290 15 6 476 9 450 5.60e-54 188
Msa0873190 AT2G36770.1 27.381 504 302 16 10 477 14 489 8.22e-54 188
Msa0873190 AT4G14090.1 28.866 485 297 17 3 475 6 454 1.64e-53 186
Msa0873190 AT2G15480.2 29.354 511 305 14 1 476 1 490 1.77e-53 187
Msa0873190 AT1G24100.1 29.339 484 293 13 8 476 9 458 3.03e-53 186
Msa0873190 AT3G53150.1 26.901 513 312 14 7 477 19 510 9.76e-53 186
Msa0873190 AT2G36780.1 28.024 496 309 14 10 477 14 489 1.19e-52 185
Msa0873190 AT5G17050.1 27.197 478 314 12 6 477 8 457 1.57e-52 184
Msa0873190 AT4G34131.1 26.869 495 325 11 1 475 1 478 1.76e-52 184
Msa0873190 AT5G26310.1 27.129 505 288 15 8 475 5 466 6.55e-52 183
Msa0873190 AT2G36760.1 28.261 506 295 18 10 477 14 489 1.49e-51 182
Msa0873190 AT3G53160.1 29.592 490 309 13 10 477 8 483 2.78e-51 181
Msa0873190 AT1G30530.1 27.579 475 308 13 7 477 9 451 3.12e-51 180
Msa0873190 AT2G36750.1 28.094 509 291 21 10 477 10 484 1.65e-50 179
Msa0873190 AT5G66690.1 27.006 511 281 17 8 475 5 466 2.05e-50 179
Msa0873190 AT2G16890.2 29.980 507 267 22 10 476 9 467 4.92e-50 178
Msa0873190 AT2G30150.2 28.243 478 294 14 10 476 13 452 8.43e-50 177
Msa0873190 AT1G10400.1 29.485 485 297 16 8 475 5 461 9.40e-50 177
Msa0873190 AT5G17030.1 26.096 479 317 11 6 477 8 456 1.29e-49 176
Msa0873190 AT3G50740.1 26.482 506 296 17 8 475 5 472 1.17e-48 174
Msa0873190 AT1G01390.1 30.862 499 278 16 9 479 7 466 1.36e-48 174
Msa0873190 AT1G01390.2 30.862 499 278 16 9 479 24 483 1.73e-48 174
Msa0873190 AT5G14860.1 29.960 504 280 21 10 476 8 475 1.82e-48 174
Msa0873190 AT5G17040.1 26.582 474 304 11 10 477 5 440 3.01e-48 172
Msa0873190 AT2G30150.1 28.059 474 292 14 14 476 1 436 3.05e-48 172
Msa0873190 AT5G17040.2 28.947 304 203 3 175 477 47 338 3.31e-46 164
Msa0873190 AT4G34138.1 27.701 509 293 18 8 478 9 480 9.22e-46 166
Msa0873190 AT3G16520.3 28.997 369 226 12 118 474 113 457 2.30e-45 165
Msa0873190 AT3G16520.2 29.630 351 211 12 118 456 113 439 1.59e-44 162
Msa0873190 AT4G34135.1 27.181 493 317 12 6 475 7 480 2.05e-44 162
Msa0873190 AT3G16520.1 29.630 351 211 12 118 456 113 439 2.10e-44 162
Msa0873190 AT3G22250.1 27.426 474 276 14 7 449 5 441 2.28e-44 162
Msa0873190 AT5G03490.1 28.926 484 293 18 6 475 15 461 2.83e-44 162
Msa0873190 AT4G36770.1 27.859 481 274 15 10 457 4 444 5.35e-44 161
Msa0873190 AT1G73880.1 30.539 501 285 21 3 477 4 467 8.83e-44 160
Msa0873190 AT5G37950.1 29.787 376 225 13 25 394 1 343 1.15e-43 157
Msa0873190 AT5G37950.2 30.133 375 219 13 25 394 1 337 5.95e-42 153
Msa0873190 AT3G21790.1 27.308 509 290 13 12 476 6 478 2.24e-40 152
Msa0873190 AT5G65550.1 27.778 468 295 14 8 460 7 446 2.84e-40 151
Msa0873190 AT2G29710.1 26.613 496 305 19 7 477 2 463 9.16e-40 149
Msa0873190 AT1G51210.1 28.289 456 274 17 8 451 18 432 1.25e-39 149
Msa0873190 AT3G21800.1 26.411 496 307 13 12 476 7 475 1.70e-39 149
Msa0873190 AT1G07260.1 29.306 389 235 12 105 477 108 472 6.60e-39 147
Msa0873190 AT3G21780.1 30.749 387 224 10 114 476 102 468 6.77e-39 147
Msa0873190 AT2G18560.1 31.068 309 169 10 187 469 79 369 2.74e-38 144
Msa0873190 AT2G29740.1 27.218 496 305 16 6 473 4 471 4.90e-38 145
Msa0873190 AT1G07250.1 29.412 374 229 10 118 477 121 473 1.76e-37 143
Msa0873190 AT2G16890.3 28.017 464 247 21 10 434 9 424 2.70e-37 142
Msa0873190 AT3G21760.1 26.316 513 292 12 12 476 6 480 1.10e-36 141
Msa0873190 AT2G18570.1 24.848 495 301 18 8 469 3 459 1.94e-36 140
Msa0873190 AT5G49690.1 25.877 456 291 16 10 452 10 431 3.46e-36 139
Msa0873190 AT2G29730.1 25.149 505 301 18 7 477 2 463 3.65e-36 139
Msa0873190 AT4G15280.1 27.579 504 300 15 8 477 2 474 4.76e-36 139
Msa0873190 AT4G15280.2 27.579 504 300 15 8 477 34 506 9.13e-36 139
Msa0873190 AT3G21750.1 26.863 510 291 16 8 477 2 469 8.72e-34 133
Msa0873190 AT4G15260.1 31.379 290 162 7 212 477 79 355 1.39e-33 130
Msa0873190 AT2G29750.1 25.553 497 307 16 12 477 10 474 2.86e-33 132
Msa0873190 AT1G07240.1 29.286 280 170 7 215 477 208 476 1.41e-31 127
Msa0873190 AT2G22590.1 27.155 464 289 14 8 452 13 446 2.43e-30 123
Msa0873190 AT5G12890.1 25.388 516 318 19 1 480 1 485 5.25e-30 122
Msa0873190 AT4G01070.2 29.032 341 188 12 6 331 4 305 4.02e-26 109
Msa0873190 AT1G64910.1 26.681 461 273 19 10 453 6 418 1.90e-22 100
Msa0873190 AT4G34135.2 27.697 343 208 10 6 331 7 326 5.10e-22 97.4
Msa0873190 AT1G06000.1 27.599 279 183 7 213 478 163 435 1.51e-21 97.4
Msa0873190 AT4G27570.1 24.783 460 292 20 8 453 5 424 3.71e-21 96.3
Msa0873190 AT4G27560.1 24.733 469 296 21 8 462 5 430 6.89e-20 92.4
Msa0873190 AT2G22930.1 24.274 482 300 15 10 476 6 437 1.34e-18 88.6
Msa0873190 AT5G53990.1 29.944 177 112 5 287 453 244 418 1.54e-17 85.1
Msa0873190 AT4G09500.2 23.861 461 290 16 8 453 4 418 1.99e-17 85.1
Msa0873190 AT3G29630.1 24.893 466 282 19 8 453 4 421 2.74e-17 84.7
Msa0873190 AT4G09500.1 30.508 177 111 5 287 453 219 393 9.88e-17 82.8
Msa0873190 AT5G54010.1 23.593 462 295 18 8 458 4 418 2.77e-16 81.6
Msa0873190 AT3G29630.2 30.726 179 111 5 286 453 219 395 7.92e-16 79.7
Msa0873190 AT2G23210.1 25.839 298 190 11 1 296 1 269 2.27e-15 77.0
Msa0873190 AT5G54060.1 25.173 433 260 17 1 409 1 393 6.81e-15 77.4
Msa0873190 AT1G50580.1 28.814 177 114 5 287 453 245 419 1.56e-14 75.9
Msa0873190 AT1G64920.1 29.834 181 111 6 287 453 244 422 9.29e-14 73.6

Find 122 sgRNAs with CRISPR-Local

Find 165 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTGTTTCAATAATTAATT+TGG 0.097840 6_1:-8805220 Msa0873190:three_prime_UTR
ATTGATGAATTTGTGGATTT+TGG 0.148483 6_1:+8805920 None:intergenic
TGATTACTTGATTGACAATT+TGG 0.178842 6_1:+8805169 None:intergenic
TGGGGTTAATGATGGATTAT+TGG 0.226563 6_1:-8805200 Msa0873190:three_prime_UTR
TAAGTTCACAATAGGGTTTA+AGG 0.228983 6_1:+8807114 None:intergenic
AAGACATTGTTGACTTTATC+AGG 0.230929 6_1:-8806119 Msa0873190:CDS
AAAGGACAATGCTATAAAAT+TGG 0.246131 6_1:+8807519 None:intergenic
GCAAAGCTTCTTCACCTTAG+AGG 0.280905 6_1:-8807323 Msa0873190:CDS
ATGAGTGATTTCTTTAAATT+AGG 0.301745 6_1:+8805103 None:intergenic
CCTAGTAATAAGTTCACAAT+AGG 0.312390 6_1:+8807106 None:intergenic
GAACTTGGACAAAGTGATTA+AGG 0.318159 6_1:-8805305 Msa0873190:CDS
ACAAAAGTAGATTGGATTCC+AGG 0.332750 6_1:-8806162 Msa0873190:CDS
ATTGTTTCAATAATTAATTT+GGG 0.337776 6_1:-8805219 Msa0873190:three_prime_UTR
ATATGGCCTTGAACTGGATA+TGG 0.341554 6_1:+8807365 None:intergenic
AAATTCAACATAATATCATT+TGG 0.341744 6_1:+8806087 None:intergenic
AAAATCAGTCAAACCATCTA+AGG 0.342054 6_1:+8807232 None:intergenic
GTTTGAACAATGGATTGATA+TGG 0.353387 6_1:+8807348 None:intergenic
GTGGACACCAACTTGCTATT+AGG 0.356812 6_1:+8805644 None:intergenic
ATTTGTAATGAATGGGAGAT+TGG 0.359619 6_1:-8805481 Msa0873190:CDS
CCTCCCGGATATTATCTGTT+TGG 0.360708 6_1:-8807557 Msa0873190:five_prime_UTR
CCTATTGTGAACTTATTACT+AGG 0.362659 6_1:-8807106 Msa0873190:CDS
AATTAATTTGGGGTTAATGA+TGG 0.366102 6_1:-8805208 Msa0873190:three_prime_UTR
TTATCTTACAAATGGATGTT+TGG 0.366166 6_1:-8806187 Msa0873190:CDS
CCTAGTGGTGTTAGACCATC+TGG 0.366909 6_1:+8807194 None:intergenic
AGTGTTGCTTAAACAAAATT+AGG 0.367119 6_1:-8805281 Msa0873190:exon
GTTTGGAAACAAAAGTAGAT+TGG 0.372644 6_1:-8806170 Msa0873190:CDS
GCAAATGTTGGAATTTGCTT+GGG 0.375617 6_1:-8805776 Msa0873190:CDS
TCCGTTGTTTATGTTAATTT+CGG 0.379062 6_1:-8805823 Msa0873190:CDS
AGAGGTCCAAATGCCTTAGA+TGG 0.381340 6_1:-8807245 Msa0873190:CDS
GTAGATTTATTTGTAATGAA+TGG 0.382641 6_1:-8805489 Msa0873190:CDS
AGGTTATGTGAAAGCCTCTA+AGG 0.390826 6_1:+8807309 None:intergenic
AAATCCACAAATTCATCAAT+TGG 0.393774 6_1:-8805917 Msa0873190:CDS
ACTCTTTAGATTCCAACCTT+TGG 0.394855 6_1:-8805894 Msa0873190:CDS
GTCAAACCATCTAAGGCATT+TGG 0.401739 6_1:+8807239 None:intergenic
TCAGAAACTAAGCAAGTAAC+TGG 0.402772 6_1:+8807059 None:intergenic
GTTGGAATTTGCTTGGGGTT+TGG 0.405650 6_1:-8805770 Msa0873190:CDS
TAGATTTATTTGTAATGAAT+GGG 0.407079 6_1:-8805488 Msa0873190:CDS
GAGTCCAATTGATGAATTTG+TGG 0.412904 6_1:+8805913 None:intergenic
AGTATCTTCTTTCCAAAGGT+TGG 0.414296 6_1:+8805882 None:intergenic
TCAAGTAATCAACGATTAGA+TGG 0.418436 6_1:-8805157 Msa0873190:three_prime_UTR
AGCAAATGTTGGAATTTGCT+TGG 0.422319 6_1:-8805777 Msa0873190:CDS
GGTTTAATAATGAAGGTAAA+GGG 0.432184 6_1:+8805941 None:intergenic
AAATCCAAACAGATAATATC+CGG 0.433841 6_1:+8807553 None:intergenic
CTAGTAATAAGTTCACAATA+GGG 0.446275 6_1:+8807107 None:intergenic
ATTAGGCCGGACCTTGTCAT+TGG 0.452933 6_1:-8805718 Msa0873190:CDS
AGCAAATTCCAACATTTGCT+CGG 0.454558 6_1:+8805780 None:intergenic
GATGAGAGTTATCTTACAAA+TGG 0.462382 6_1:-8806195 Msa0873190:CDS
TGGTTTAATAATGAAGGTAA+AGG 0.468725 6_1:+8805940 None:intergenic
GAATTGATGGTGGGAGAGAA+AGG 0.475632 6_1:-8805406 Msa0873190:CDS
ACACCTCTTTCTACAAAAGA+TGG 0.477910 6_1:+8806933 None:intergenic
GGATTGATATGGCCTTGAAC+TGG 0.479128 6_1:+8807359 None:intergenic
AAGATACTGAGTGTCTTGAT+TGG 0.480832 6_1:-8805867 Msa0873190:CDS
CAAATAAATCTACAGTCTGT+TGG 0.481604 6_1:+8805499 None:intergenic
ATGATTCCATATCCAGTTCA+AGG 0.483373 6_1:-8807371 Msa0873190:CDS
AGGCCGGACCTTGTCATTGG+TGG 0.483422 6_1:-8805715 Msa0873190:CDS
ACGAATGAAATTGCAGATAG+AGG 0.484929 6_1:-8805667 Msa0873190:CDS
AACAACGGATCCCGGCTCCT+TGG 0.486045 6_1:+8805837 None:intergenic
TATTATGTTTGCAAGTTATG+AGG 0.488272 6_1:+8807452 None:intergenic
CAAGCTGATCAATGAATTGA+TGG 0.489788 6_1:-8805419 Msa0873190:CDS
GTGCAAATTCTTCAGCAGCT+TGG 0.489819 6_1:+8807015 None:intergenic
TCTTGATTGGCTTGAATCCA+AGG 0.492781 6_1:-8805854 Msa0873190:CDS
CATCAATTCATTGATCAGCT+TGG 0.495941 6_1:+8805420 None:intergenic
TGGTTCAACACTTTCTCTTG+TGG 0.496098 6_1:+8805625 None:intergenic
GAGCCACCAATGACAAGGTC+CGG 0.497625 6_1:+8805712 None:intergenic
GTAAACTTAGTACCTTTGAA+TGG 0.497967 6_1:+8806906 None:intergenic
TCCAGCGCATATGCTTTCAA+TGG 0.498870 6_1:+8805558 None:intergenic
GTCAAGAATCCGCCGATTGA+AGG 0.503038 6_1:+8805601 None:intergenic
TTGGCTTGAATCCAAGGAGC+CGG 0.504128 6_1:-8805848 Msa0873190:CDS
GCAAATTCCAACATTTGCTC+GGG 0.504999 6_1:+8805781 None:intergenic
CTTACTGATTGACAAAGAGT+TGG 0.519557 6_1:+8807146 None:intergenic
TTGTTACAATCTCAACCTCC+CGG 0.520819 6_1:-8807572 Msa0873190:five_prime_UTR
GCAAGTAACTGGTGGGACAT+TGG 0.523788 6_1:+8807070 None:intergenic
TAATGAATGGGAGATTGGTA+TGG 0.527344 6_1:-8805476 Msa0873190:CDS
AATGAAGGTAAAGGGCCGAT+AGG 0.530778 6_1:+8805949 None:intergenic
GTGTTGAACCACCCTTCAAT+CGG 0.531273 6_1:-8805613 Msa0873190:CDS
GATTCTTGACTCATTGTGGA+TGG 0.539523 6_1:-8805588 Msa0873190:CDS
GAATGTGAAGAGAGAGGAGT+TGG 0.539604 6_1:-8805443 Msa0873190:CDS
ATGAAGGTAAAGGGCCGATA+GGG 0.540303 6_1:+8805950 None:intergenic
ACCATTGAAAGCATATGCGC+TGG 0.543602 6_1:-8805559 Msa0873190:CDS
GAGGTTGAGATTGTAACAAA+AGG 0.545357 6_1:+8807576 None:intergenic
TCAAGAATCCGCCGATTGAA+GGG 0.546732 6_1:+8805602 None:intergenic
TATGACACCCGAGCAAATGT+TGG 0.552021 6_1:-8805788 Msa0873190:CDS
TGGCTTGAATCCAAGGAGCC+GGG 0.553822 6_1:-8805847 Msa0873190:CDS
TGCAATGGAGTTGAAGAAGA+AGG 0.554838 6_1:-8805365 Msa0873190:CDS
TTAACATAAACAACGGATCC+CGG 0.555991 6_1:+8805829 None:intergenic
GACGTTGAGGCAAAATGCAA+TGG 0.557209 6_1:-8805380 Msa0873190:CDS
CTGGAGTGCCGATGTTGTGT+TGG 0.557220 6_1:-8805540 Msa0873190:CDS
GGCGGATTCTTGACTCATTG+TGG 0.560659 6_1:-8805592 Msa0873190:CDS
ACTCAGTATCTTCTTTCCAA+AGG 0.563526 6_1:+8805878 None:intergenic
TGGTTGTTCATACATGAACT+TGG 0.565181 6_1:-8805320 Msa0873190:CDS
AGCTTTGAAACCATCCCAGA+TGG 0.571170 6_1:-8807209 Msa0873190:CDS
CAAATGTTGGAATTTGCTTG+GGG 0.573887 6_1:-8805775 Msa0873190:CDS
AGCTTTGCTAGTTTGAACAA+TGG 0.574139 6_1:+8807338 None:intergenic
GTGATTTCTTTAAATTAGGT+CGG 0.583432 6_1:+8805107 None:intergenic
TGGTGTTAGACCATCTGGGA+TGG 0.585226 6_1:+8807199 None:intergenic
CCAGATGGTCTAACACCACT+AGG 0.586590 6_1:-8807194 Msa0873190:CDS
ATTGTATTCAGTATTAACAA+AGG 0.597303 6_1:+8807289 None:intergenic
TGATACGAATGTGAAGAGAG+AGG 0.599013 6_1:-8805449 Msa0873190:CDS
AAACTAAGCAAGTAACTGGT+GGG 0.599605 6_1:+8807063 None:intergenic
AGTGCATCAAAGCATAGTAA+TGG 0.600263 6_1:+8805258 None:intergenic
AATCCAAACAGATAATATCC+GGG 0.600317 6_1:+8807554 None:intergenic
AGAGGTGTCATACCATTCAA+AGG 0.605847 6_1:-8806918 Msa0873190:intron
TTGTTTCAATAATTAATTTG+GGG 0.607384 6_1:-8805218 Msa0873190:three_prime_UTR
AAACGTTTGCTCAAATCAAG+AGG 0.613843 6_1:-8807263 Msa0873190:CDS
TTGAACCACCCTTCAATCGG+CGG 0.615937 6_1:-8805610 Msa0873190:CDS
GCCGAAATTAACATAAACAA+CGG 0.626922 6_1:+8805822 None:intergenic
GAAACTAAGCAAGTAACTGG+TGG 0.629351 6_1:+8807062 None:intergenic
CTAGTGGTGTTAGACCATCT+GGG 0.639019 6_1:+8807195 None:intergenic
CTGATCAATGAATTGATGGT+GGG 0.642727 6_1:-8805415 Msa0873190:CDS
TCACTGAGCCACCAATGACA+AGG 0.642748 6_1:+8805707 None:intergenic
GCACAAGAGAACACTAGACC+AGG 0.646679 6_1:-8805343 Msa0873190:CDS
ATAGAGGCCTAATAGCAAGT+TGG 0.652566 6_1:-8805651 Msa0873190:CDS
ACTTGCAAACATAATAACAA+AGG 0.653835 6_1:-8807445 Msa0873190:five_prime_UTR
GCTGATCAATGAATTGATGG+TGG 0.656580 6_1:-8805416 Msa0873190:CDS
GGTCTAACACCACTAGGTGA+TGG 0.656884 6_1:-8807188 Msa0873190:CDS
TATGGAATCATCACAGCATG+TGG 0.657258 6_1:+8807383 None:intergenic
TTCATGTATGAACAACCACC+TGG 0.668591 6_1:+8805325 None:intergenic
AGAATCCGCCGATTGAAGGG+TGG 0.673563 6_1:+8805605 None:intergenic
CTAACATCACCATCACCTAG+TGG 0.680677 6_1:+8807179 None:intergenic
GAGAGAAAGGAAAGACGTTG+AGG 0.691399 6_1:-8805393 Msa0873190:CDS
CAAGAGAACACTAGACCAGG+TGG 0.735241 6_1:-8805340 Msa0873190:CDS
CCAAACAGATAATATCCGGG+AGG 0.736190 6_1:+8807557 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATTATAATATTAAAA+GGG + chr6_1:8805978-8805997 None:intergenic 0.0%
!! AAAAATATTATAATATTAAA+AGG + chr6_1:8805979-8805998 None:intergenic 0.0%
!!! CTAAATTTTAAAAAATACAA+TGG + chr6_1:8806258-8806277 None:intergenic 10.0%
!!! CATTGTATTTTTTAAAATTT+AGG - chr6_1:8806256-8806275 Msa0873190:intron 10.0%
!!! TATTTTTTAAAATTTAGGAA+GGG - chr6_1:8806261-8806280 Msa0873190:intron 10.0%
!! TATTGTTTCAATAATTAATT+TGG - chr6_1:8807490-8807509 Msa0873190:five_prime_UTR 10.0%
!! ATTGTTTCAATAATTAATTT+GGG - chr6_1:8807491-8807510 Msa0873190:five_prime_UTR 10.0%
!! TTTAATAGAAGAAGAAAAAA+AGG + chr6_1:8805212-8805231 None:intergenic 15.0%
!!! GTATTTTTTAAAATTTAGGA+AGG - chr6_1:8806260-8806279 Msa0873190:intron 15.0%
!!! ATTTTTTAAAATTTAGGAAG+GGG - chr6_1:8806262-8806281 Msa0873190:intron 15.0%
!!! AATGAAAGTTTTTAATTTGA+CGG + chr6_1:8806422-8806441 None:intergenic 15.0%
!! AAATTCAACATAATATCATT+TGG + chr6_1:8806626-8806645 None:intergenic 15.0%
!! TAGATTTATTTGTAATGAAT+GGG - chr6_1:8807222-8807241 Msa0873190:CDS 15.0%
!!! TTGTTTCAATAATTAATTTG+GGG - chr6_1:8807492-8807511 Msa0873190:five_prime_UTR 15.0%
!! ATTGTATTCAGTATTAACAA+AGG + chr6_1:8805424-8805443 None:intergenic 20.0%
!! ATGAAAAATAGAGAACATTT+GGG + chr6_1:8805722-8805741 None:intergenic 20.0%
!! GTAGATTTATTTGTAATGAA+TGG - chr6_1:8807221-8807240 Msa0873190:CDS 20.0%
!! ATGAGTGATTTCTTTAAATT+AGG + chr6_1:8807610-8807629 None:intergenic 20.0%
! AAATCCAAACAGATAATATC+CGG + chr6_1:8805160-8805179 None:intergenic 25.0%
! AAAGGACAATGCTATAAAAT+TGG + chr6_1:8805194-8805213 None:intergenic 25.0%
! TATTATGTTTGCAAGTTATG+AGG + chr6_1:8805261-8805280 None:intergenic 25.0%
! ACTTGCAAACATAATAACAA+AGG - chr6_1:8805265-8805284 Msa0873190:exon 25.0%
! AAGGAGAGAATTATCAAAAA+TGG - chr6_1:8805284-8805303 Msa0873190:CDS 25.0%
! AGGAGAGAATTATCAAAAAT+GGG - chr6_1:8805285-8805304 Msa0873190:CDS 25.0%
! CTAGTAATAAGTTCACAATA+GGG + chr6_1:8805606-8805625 None:intergenic 25.0%
! GATGAAAAATAGAGAACATT+TGG + chr6_1:8805723-8805742 None:intergenic 25.0%
! TATATATATATCCATTGAGC+CGG - chr6_1:8805910-8805929 Msa0873190:CDS 25.0%
!!! AAAGTTTTTAATTTGACGGT+TGG + chr6_1:8806418-8806437 None:intergenic 25.0%
! TTCATACACACACATATATA+AGG + chr6_1:8806457-8806476 None:intergenic 25.0%
! TTATCTTACAAATGGATGTT+TGG - chr6_1:8806523-8806542 Msa0873190:intron 25.0%
! GGTTTAATAATGAAGGTAAA+GGG + chr6_1:8806772-8806791 None:intergenic 25.0%
! TGGTTTAATAATGAAGGTAA+AGG + chr6_1:8806773-8806792 None:intergenic 25.0%
!!! GGATTTTGGTTTAATAATGA+AGG + chr6_1:8806779-8806798 None:intergenic 25.0%
!! ATTGATGAATTTGTGGATTT+TGG + chr6_1:8806793-8806812 None:intergenic 25.0%
! AAATCCACAAATTCATCAAT+TGG - chr6_1:8806793-8806812 Msa0873190:intron 25.0%
! TCCGTTGTTTATGTTAATTT+CGG - chr6_1:8806887-8806906 Msa0873190:intron 25.0%
!!! AGTGTTGCTTAAACAAAATT+AGG - chr6_1:8807429-8807448 Msa0873190:exon 25.0%
!! AATTAATTTGGGGTTAATGA+TGG - chr6_1:8807502-8807521 Msa0873190:five_prime_UTR 25.0%
! TGATTACTTGATTGACAATT+TGG + chr6_1:8807544-8807563 None:intergenic 25.0%
! GTGATTTCTTTAAATTAGGT+CGG + chr6_1:8807606-8807625 None:intergenic 25.0%
AATCCAAACAGATAATATCC+GGG + chr6_1:8805159-8805178 None:intergenic 30.0%
!! GTTTGAACAATGGATTGATA+TGG + chr6_1:8805365-8805384 None:intergenic 30.0%
AAAATCAGTCAAACCATCTA+AGG + chr6_1:8805481-8805500 None:intergenic 30.0%
TAAGTTCACAATAGGGTTTA+AGG + chr6_1:8805599-8805618 None:intergenic 30.0%
CCTAGTAATAAGTTCACAAT+AGG + chr6_1:8805607-8805626 None:intergenic 30.0%
CCTATTGTGAACTTATTACT+AGG - chr6_1:8805604-8805623 Msa0873190:CDS 30.0%
! TTTCCATCTTTTGTAGAAAG+AGG - chr6_1:8805774-8805793 Msa0873190:CDS 30.0%
GTAAACTTAGTACCTTTGAA+TGG + chr6_1:8805807-8805826 None:intergenic 30.0%
GCAGATAGTTGAAATACTTT+CGG + chr6_1:8806322-8806341 None:intergenic 30.0%
ACTCTATGAGTTATAAACTC+CGG + chr6_1:8806373-8806392 None:intergenic 30.0%
AACGAAAGTTAATTGCTTGA+AGG + chr6_1:8806480-8806499 None:intergenic 30.0%
GATGAGAGTTATCTTACAAA+TGG - chr6_1:8806515-8806534 Msa0873190:intron 30.0%
GTTTGGAAACAAAAGTAGAT+TGG - chr6_1:8806540-8806559 Msa0873190:intron 30.0%
TTCCAGGTTTGAAAAACTTT+CGG - chr6_1:8806564-8806583 Msa0873190:intron 30.0%
!! AAGACATTGTTGACTTTATC+AGG - chr6_1:8806591-8806610 Msa0873190:intron 30.0%
GTAAAAAGAAGGAATTGTAG+AGG + chr6_1:8806741-8806760 None:intergenic 30.0%
! ATTCCTTCTTTTTACCCTAT+CGG - chr6_1:8806746-8806765 Msa0873190:intron 30.0%
GCCGAAATTAACATAAACAA+CGG + chr6_1:8806891-8806910 None:intergenic 30.0%
CAAAAATGGTTTCTTGCAAT+TGG + chr6_1:8806966-8806985 None:intergenic 30.0%
!! ATTGCAAGAAACCATTTTTG+TGG - chr6_1:8806966-8806985 Msa0873190:CDS 30.0%
!! AACCATTTTTGTGGATCATT+AGG - chr6_1:8806975-8806994 Msa0873190:CDS 30.0%
CAAATAAATCTACAGTCTGT+TGG + chr6_1:8807214-8807233 None:intergenic 30.0%
ATTTGTAATGAATGGGAGAT+TGG - chr6_1:8807229-8807248 Msa0873190:CDS 30.0%
TCAAGTAATCAACGATTAGA+TGG - chr6_1:8807553-8807572 Msa0873190:five_prime_UTR 30.0%
GAGGTTGAGATTGTAACAAA+AGG + chr6_1:8805137-8805156 None:intergenic 35.0%
ATGATTCCATATCCAGTTCA+AGG - chr6_1:8805339-8805358 Msa0873190:CDS 35.0%
! AGCTTTGCTAGTTTGAACAA+TGG + chr6_1:8805375-8805394 None:intergenic 35.0%
AAACGTTTGCTCAAATCAAG+AGG - chr6_1:8805447-8805466 Msa0873190:CDS 35.0%
! CTTACTGATTGACAAAGAGT+TGG + chr6_1:8805567-8805586 None:intergenic 35.0%
AAACTAAGCAAGTAACTGGT+GGG + chr6_1:8805650-8805669 None:intergenic 35.0%
TCAGAAACTAAGCAAGTAAC+TGG + chr6_1:8805654-8805673 None:intergenic 35.0%
ACACCTCTTTCTACAAAAGA+TGG + chr6_1:8805780-8805799 None:intergenic 35.0%
! AAATCTTAAAACCGGCTCAA+TGG + chr6_1:8805924-8805943 None:intergenic 35.0%
!!! TGAGCCGGTTTTAAGATTTT+TGG - chr6_1:8805925-8805944 Msa0873190:CDS 35.0%
GACGCCAAAAATCTTAAAAC+CGG + chr6_1:8805932-8805951 None:intergenic 35.0%
!!! TTTTAAGATTTTTGGCGTCC+TGG - chr6_1:8805933-8805952 Msa0873190:CDS 35.0%
!!! TTTAAGATTTTTGGCGTCCT+GGG - chr6_1:8805934-8805953 Msa0873190:CDS 35.0%
! ACAATTTTATTGTTTCGCCC+AGG + chr6_1:8805954-8805973 None:intergenic 35.0%
ACAAAAGTAGATTGGATTCC+AGG - chr6_1:8806548-8806567 Msa0873190:intron 35.0%
!! AACCGAAAGTTTTTCAAACC+TGG + chr6_1:8806569-8806588 None:intergenic 35.0%
GAGTCCAATTGATGAATTTG+TGG + chr6_1:8806800-8806819 None:intergenic 35.0%
ACTCTTTAGATTCCAACCTT+TGG - chr6_1:8806816-8806835 Msa0873190:intron 35.0%
AGTATCTTCTTTCCAAAGGT+TGG + chr6_1:8806831-8806850 None:intergenic 35.0%
ACTCAGTATCTTCTTTCCAA+AGG + chr6_1:8806835-8806854 None:intergenic 35.0%
AAGATACTGAGTGTCTTGAT+TGG - chr6_1:8806843-8806862 Msa0873190:intron 35.0%
TTAACATAAACAACGGATCC+CGG + chr6_1:8806884-8806903 None:intergenic 35.0%
AGCAAATTCCAACATTTGCT+CGG + chr6_1:8806933-8806952 None:intergenic 35.0%
! AGCAAATGTTGGAATTTGCT+TGG - chr6_1:8806933-8806952 Msa0873190:CDS 35.0%
! GCAAATGTTGGAATTTGCTT+GGG - chr6_1:8806934-8806953 Msa0873190:CDS 35.0%
! CAAATGTTGGAATTTGCTTG+GGG - chr6_1:8806935-8806954 Msa0873190:CDS 35.0%
! ATTTTTGTGGATCATTAGGC+CGG - chr6_1:8806979-8806998 Msa0873190:CDS 35.0%
ACGAATGAAATTGCAGATAG+AGG - chr6_1:8807043-8807062 Msa0873190:CDS 35.0%
AAAAATGGCCAACACAACAT+CGG + chr6_1:8807181-8807200 None:intergenic 35.0%
TAATGAATGGGAGATTGGTA+TGG - chr6_1:8807234-8807253 Msa0873190:CDS 35.0%
CATCAATTCATTGATCAGCT+TGG + chr6_1:8807293-8807312 None:intergenic 35.0%
CAAGCTGATCAATGAATTGA+TGG - chr6_1:8807291-8807310 Msa0873190:CDS 35.0%
! CTGATCAATGAATTGATGGT+GGG - chr6_1:8807295-8807314 Msa0873190:CDS 35.0%
TGGTTGTTCATACATGAACT+TGG - chr6_1:8807390-8807409 Msa0873190:CDS 35.0%
GAACTTGGACAAAGTGATTA+AGG - chr6_1:8807405-8807424 Msa0873190:CDS 35.0%
AGTGCATCAAAGCATAGTAA+TGG + chr6_1:8807455-8807474 None:intergenic 35.0%
!! TGGGGTTAATGATGGATTAT+TGG - chr6_1:8807510-8807529 Msa0873190:five_prime_UTR 35.0%
TTGTTACAATCTCAACCTCC+CGG - chr6_1:8805138-8805157 Msa0873190:three_prime_UTR 40.0%
TATGGAATCATCACAGCATG+TGG + chr6_1:8805330-8805349 None:intergenic 40.0%
! ATATGGCCTTGAACTGGATA+TGG + chr6_1:8805348-8805367 None:intergenic 40.0%
AGGTTATGTGAAAGCCTCTA+AGG + chr6_1:8805404-8805423 None:intergenic 40.0%
! GTCAAACCATCTAAGGCATT+TGG + chr6_1:8805474-8805493 None:intergenic 40.0%
GAAACTAAGCAAGTAACTGG+TGG + chr6_1:8805651-8805670 None:intergenic 40.0%
!! AGAGGTGTCATACCATTCAA+AGG - chr6_1:8805792-8805811 Msa0873190:CDS 40.0%
!! ATCTGCACTTTGAGACTACA+AGG - chr6_1:8806336-8806355 Msa0873190:intron 40.0%
CTACAAGGTCAAACTCTTAC+CGG - chr6_1:8806351-8806370 Msa0873190:intron 40.0%
!! TCTTGATTGGCTTGAATCCA+AGG - chr6_1:8806856-8806875 Msa0873190:intron 40.0%
GCAAATTCCAACATTTGCTC+GGG + chr6_1:8806932-8806951 None:intergenic 40.0%
GGCCTAATGATCCACAAAAA+TGG + chr6_1:8806980-8806999 None:intergenic 40.0%
ATAGAGGCCTAATAGCAAGT+TGG - chr6_1:8807059-8807078 Msa0873190:CDS 40.0%
TGGTTCAACACTTTCTCTTG+TGG + chr6_1:8807088-8807107 None:intergenic 40.0%
GATTCTTGACTCATTGTGGA+TGG - chr6_1:8807122-8807141 Msa0873190:CDS 40.0%
GTTGGCTGATCAGCAAAAAA+TGG + chr6_1:8807196-8807215 None:intergenic 40.0%
TGATACGAATGTGAAGAGAG+AGG - chr6_1:8807261-8807280 Msa0873190:CDS 40.0%
GCTGATCAATGAATTGATGG+TGG - chr6_1:8807294-8807313 Msa0873190:CDS 40.0%
TGCAATGGAGTTGAAGAAGA+AGG - chr6_1:8807345-8807364 Msa0873190:CDS 40.0%
TTCATGTATGAACAACCACC+TGG + chr6_1:8807388-8807407 None:intergenic 40.0%
CCAAACAGATAATATCCGGG+AGG + chr6_1:8805156-8805175 None:intergenic 45.0%
CCTCCCGGATATTATCTGTT+TGG - chr6_1:8805153-8805172 Msa0873190:three_prime_UTR 45.0%
! GGATTGATATGGCCTTGAAC+TGG + chr6_1:8805354-8805373 None:intergenic 45.0%
GCAAAGCTTCTTCACCTTAG+AGG - chr6_1:8805387-8805406 Msa0873190:CDS 45.0%
AGAGGTCCAAATGCCTTAGA+TGG - chr6_1:8805465-8805484 Msa0873190:CDS 45.0%
!! AGCTTTGAAACCATCCCAGA+TGG - chr6_1:8805501-8805520 Msa0873190:CDS 45.0%
! CTAGTGGTGTTAGACCATCT+GGG + chr6_1:8805518-8805537 None:intergenic 45.0%
CTAACATCACCATCACCTAG+TGG + chr6_1:8805534-8805553 None:intergenic 45.0%
GTGCAAATTCTTCAGCAGCT+TGG + chr6_1:8805698-8805717 None:intergenic 45.0%
ATGAAGGTAAAGGGCCGATA+GGG + chr6_1:8806763-8806782 None:intergenic 45.0%
AATGAAGGTAAAGGGCCGAT+AGG + chr6_1:8806764-8806783 None:intergenic 45.0%
TATGACACCCGAGCAAATGT+TGG - chr6_1:8806922-8806941 Msa0873190:CDS 45.0%
! GTTGGAATTTGCTTGGGGTT+TGG - chr6_1:8806940-8806959 Msa0873190:CDS 45.0%
!! GTGGACACCAACTTGCTATT+AGG + chr6_1:8807069-8807088 None:intergenic 45.0%
GTGTTGAACCACCCTTCAAT+CGG - chr6_1:8807097-8807116 Msa0873190:CDS 45.0%
! TCAAGAATCCGCCGATTGAA+GGG + chr6_1:8807111-8807130 None:intergenic 45.0%
! ACCATTGAAAGCATATGCGC+TGG - chr6_1:8807151-8807170 Msa0873190:CDS 45.0%
TCCAGCGCATATGCTTTCAA+TGG + chr6_1:8807155-8807174 None:intergenic 45.0%
GAATGTGAAGAGAGAGGAGT+TGG - chr6_1:8807267-8807286 Msa0873190:CDS 45.0%
!! GAATTGATGGTGGGAGAGAA+AGG - chr6_1:8807304-8807323 Msa0873190:CDS 45.0%
GAGAGAAAGGAAAGACGTTG+AGG - chr6_1:8807317-8807336 Msa0873190:CDS 45.0%
GACGTTGAGGCAAAATGCAA+TGG - chr6_1:8807330-8807349 Msa0873190:CDS 45.0%
!! ATATATATATATATTATAGA+GGG + chr6_1:8806084-8806103 None:intergenic 5.0%
!! TATATATATATATATTATAG+AGG + chr6_1:8806085-8806104 None:intergenic 5.0%
! TGGTGTTAGACCATCTGGGA+TGG + chr6_1:8805514-8805533 None:intergenic 50.0%
! CCTAGTGGTGTTAGACCATC+TGG + chr6_1:8805519-8805538 None:intergenic 50.0%
CCAGATGGTCTAACACCACT+AGG - chr6_1:8805516-8805535 Msa0873190:CDS 50.0%
GGTCTAACACCACTAGGTGA+TGG - chr6_1:8805522-8805541 Msa0873190:CDS 50.0%
GCAAGTAACTGGTGGGACAT+TGG + chr6_1:8805643-8805662 None:intergenic 50.0%
GGGCCGATAGGGTAAAAAGA+AGG + chr6_1:8806752-8806771 None:intergenic 50.0%
! TTGGCTTGAATCCAAGGAGC+CGG - chr6_1:8806862-8806881 Msa0873190:intron 50.0%
ATTAGGCCGGACCTTGTCAT+TGG - chr6_1:8806992-8807011 Msa0873190:CDS 50.0%
TCACTGAGCCACCAATGACA+AGG + chr6_1:8807006-8807025 None:intergenic 50.0%
TTGAACCACCCTTCAATCGG+CGG - chr6_1:8807100-8807119 Msa0873190:CDS 50.0%
! GTCAAGAATCCGCCGATTGA+AGG + chr6_1:8807112-8807131 None:intergenic 50.0%
! GGCGGATTCTTGACTCATTG+TGG - chr6_1:8807118-8807137 Msa0873190:CDS 50.0%
GCACAAGAGAACACTAGACC+AGG - chr6_1:8807367-8807386 Msa0873190:CDS 50.0%
CAAGAGAACACTAGACCAGG+TGG - chr6_1:8807370-8807389 Msa0873190:CDS 50.0%
TGGCTTGAATCCAAGGAGCC+GGG - chr6_1:8806863-8806882 Msa0873190:intron 55.0%
GAGCCACCAATGACAAGGTC+CGG + chr6_1:8807001-8807020 None:intergenic 55.0%
! AGAATCCGCCGATTGAAGGG+TGG + chr6_1:8807108-8807127 None:intergenic 55.0%
!! CTGGAGTGCCGATGTTGTGT+TGG - chr6_1:8807170-8807189 Msa0873190:CDS 55.0%
AACAACGGATCCCGGCTCCT+TGG + chr6_1:8806876-8806895 None:intergenic 60.0%
AGGCCGGACCTTGTCATTGG+TGG - chr6_1:8806995-8807014 Msa0873190:CDS 60.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 8805081 8807651 8805081 ID=Msa0873190;Name=Msa0873190
chr6_1 mRNA 8805081 8807651 8805081 ID=Msa0873190-mRNA-1;Parent=Msa0873190;Name=Msa0873190-mRNA-1;_AED=0.02;_eAED=0.02;_QI=222|1|1|1|1|1|2|201|481
chr6_1 exon 8805081 8806216 8805081 ID=Msa0873190-mRNA-1:exon:2694;Parent=Msa0873190-mRNA-1
chr6_1 exon 8806919 8807651 8806919 ID=Msa0873190-mRNA-1:exon:2693;Parent=Msa0873190-mRNA-1
chr6_1 five_prime_UTR 8807430 8807651 8807430 ID=Msa0873190-mRNA-1:five_prime_utr;Parent=Msa0873190-mRNA-1
chr6_1 CDS 8806919 8807429 8806919 ID=Msa0873190-mRNA-1:cds;Parent=Msa0873190-mRNA-1
chr6_1 CDS 8805282 8806216 8805282 ID=Msa0873190-mRNA-1:cds;Parent=Msa0873190-mRNA-1
chr6_1 three_prime_UTR 8805081 8805281 8805081 ID=Msa0873190-mRNA-1:three_prime_utr;Parent=Msa0873190-mRNA-1
Gene Sequence

>Msa0873190

ATGGGAAACTTTGCAAACAGAAAACCACATGCTGTGATGATTCCATATCCAGTTCAAGGCCATATCAATCCATTGTTCAAACTAGCAAAGCTTCTTCACCTTAGAGGCTTTCACATAACCTTTGTTAATACTGAATACAATCACAAACGTTTGCTCAAATCAAGAGGTCCAAATGCCTTAGATGGTTTGACTGATTTTAGCTTTGAAACCATCCCAGATGGTCTAACACCACTAGGTGATGGTGATGTTAGTCAAGATGTACCAACTCTTTGTCAATCAGTAAGAAAGAATTTCCTTAAACCCTATTGTGAACTTATTACTAGGCTTAATCACTCTGCCAATGTCCCACCAGTTACTTGCTTAGTTTCTGATTGTTGTATGAGCTTTACTATCCAAGCTGCTGAAGAATTTGCACTCCCAAATGTTCTCTATTTTTCATCTAGTGCATGTTCTTTATTGAATGTGATGTACTTTCCATCTTTTGTAGAAAGAGGTGTCATACCATTCAAAGATGAGAGTTATCTTACAAATGGATGTTTGGAAACAAAAGTAGATTGGATTCCAGGTTTGAAAAACTTTCGGTTGAAAGACATTGTTGACTTTATCAGGACAACAAATCCAAATGATATTATGTTGAATTTCTTTATTGAAATTGCAGATAGAGTTAATAGTGACTCTACTATTCTTTTGAATACTTTCAATGAACTTGAGAGTGATGTAATAAATGCTCTCTCCTCTACAATTCCTTCTTTTTACCCTATCGGCCCTTTACCTTCATTATTAAACCAAAATCCACAAATTCATCAATTGGACTCTTTAGATTCCAACCTTTGGAAAGAAGATACTGAGTGTCTTGATTGGCTTGAATCCAAGGAGCCGGGATCCGTTGTTTATGTTAATTTCGGCAGCATTACAGTTATGACACCCGAGCAAATGTTGGAATTTGCTTGGGGTTTGGCCAATTGCAAGAAACCATTTTTGTGGATCATTAGGCCGGACCTTGTCATTGGTGGCTCAGTGATTTTGTCAACTGAGTTTACGAATGAAATTGCAGATAGAGGCCTAATAGCAAGTTGGTGTCCACAAGAGAAAGTGTTGAACCACCCTTCAATCGGCGGATTCTTGACTCATTGTGGATGGAATTCAACCATTGAAAGCATATGCGCTGGAGTGCCGATGTTGTGTTGGCCATTTTTTGCTGATCAGCCAACAGACTGTAGATTTATTTGTAATGAATGGGAGATTGGTATGGAAATTGATACGAATGTGAAGAGAGAGGAGTTGGCCAAGCTGATCAATGAATTGATGGTGGGAGAGAAAGGAAAGACGTTGAGGCAAAATGCAATGGAGTTGAAGAAGAAGGCACAAGAGAACACTAGACCAGGTGGTTGTTCATACATGAACTTGGACAAAGTGATTAAGGAAGTGTTGCTTAAACAAAATTAG

Protein sequence

>Msa0873190

MGNFANRKPHAVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPNALDGLTDFSFETIPDGLTPLGDGDVSQDVPTLCQSVRKNFLKPYCELITRLNHSANVPPVTCLVSDCCMSFTIQAAEEFALPNVLYFSSSACSLLNVMYFPSFVERGVIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLNFFIEIADRVNSDSTILLNTFNELESDVINALSSTIPSFYPIGPLPSLLNQNPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSITVMTPEQMLEFAWGLANCKKPFLWIIRPDLVIGGSVILSTEFTNEIADRGLIASWCPQEKVLNHPSIGGFLTHCGWNSTIESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVKREELAKLINELMVGEKGKTLRQNAMELKKKAQENTRPGGCSYMNLDKVIKEVLLKQN*