Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0293840 | AES66525.2 | 97.758 | 223 | 5 | 0 | 1 | 223 | 80 | 302 | 8.73e-154 | 447 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0293840 | sp|Q9ZV88|BEH4_ARATH | 60.084 | 238 | 69 | 7 | 1 | 221 | 81 | 309 | 2.37e-73 | 228 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0293840 | TF | BES1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0069350 | Msa0293840 | 0.805732 | 1.157836e-49 | -8.615850e-47 |
| Msa0134930 | Msa0293840 | 0.800524 | 1.384116e-48 | -8.615850e-47 |
| Msa0214210 | Msa0293840 | 0.859688 | 3.478538e-63 | -8.615850e-47 |
| Msa0254540 | Msa0293840 | 0.948320 | 1.192474e-106 | -8.615850e-47 |
| Msa0293840 | Msa0332280 | 0.937119 | 5.814823e-98 | -8.615850e-47 |
| Msa0293840 | Msa0557850 | 0.839369 | 1.650809e-57 | -8.615850e-47 |
| Msa0293840 | Msa0653160 | 0.823895 | 1.082749e-53 | -8.615850e-47 |
| Msa0293840 | Msa0749190 | 0.803467 | 3.438406e-49 | -8.615850e-47 |
| Msa0293840 | Msa0930950 | -0.810519 | 1.106896e-50 | -8.615850e-47 |
| Msa0293840 | Msa0978980 | 0.807892 | 4.048144e-50 | -8.615850e-47 |
| Msa0293840 | Msa1033420 | 0.814946 | 1.189169e-51 | -8.615850e-47 |
| Msa0293840 | Msa1073060 | 0.825377 | 4.844851e-54 | -8.615850e-47 |
| Msa0293840 | Msa1160780 | 0.851975 | 6.253093e-61 | -8.615850e-47 |
| Msa0293840 | Msa1349850 | -0.810036 | 1.406975e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0293840 | MtrunA17_Chr2g0315201 | 97.758 | 223 | 5 | 0 | 1 | 223 | 80 | 302 | 7.62e-157 | 437 |
| Msa0293840 | MtrunA17_Chr2g0315211 | 67.544 | 228 | 67 | 1 | 1 | 221 | 80 | 307 | 1.64e-102 | 299 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0293840 | AT1G78700.1 | 60.084 | 238 | 69 | 7 | 1 | 221 | 81 | 309 | 2.41e-74 | 228 |
| Msa0293840 | AT4G18890.2 | 50.000 | 228 | 68 | 10 | 1 | 221 | 4 | 192 | 9.68e-51 | 164 |
| Msa0293840 | AT4G18890.1 | 50.000 | 228 | 68 | 10 | 1 | 221 | 80 | 268 | 8.34e-50 | 164 |
Find 82 sgRNAs with CRISPR-Local
Find 388 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATCCCAGCAAACCATTC+AGG | 0.319016 | 2_3:+45351153 | None:intergenic |
| TACTCCTTCCTGCCTTCTTC+CGG | 0.325671 | 2_3:-45351207 | Msa0293840:CDS |
| TCGAAGCCCATTTGCCTTCA+AGG | 0.331246 | 2_3:-45351085 | Msa0293840:CDS |
| CATTTGGAAGCAACACATTT+GGG | 0.336623 | 2_3:-45350930 | Msa0293840:CDS |
| CTCTCCACAGCTTCATCTTC+AGG | 0.340264 | 2_3:-45351381 | Msa0293840:CDS |
| ATGGAGCCACTATGAAAATA+AGG | 0.355143 | 2_3:+45351336 | None:intergenic |
| GCATTTGGAAGCAACACATT+TGG | 0.360050 | 2_3:-45350931 | Msa0293840:CDS |
| GCATCTTCCTTGAAGGCAAA+TGG | 0.365893 | 2_3:+45351078 | None:intergenic |
| ATGTGGACCCCTGGACAGTC+AGG | 0.369643 | 2_3:-45351033 | Msa0293840:CDS |
| GCCTTTAGAGAACATGGATA+TGG | 0.373174 | 2_3:-45351544 | None:intergenic |
| ATCTCAGATGAATTTGCATT+TGG | 0.385434 | 2_3:-45350946 | Msa0293840:CDS |
| TCTGCACGGCCCGGGTGGAC+TGG | 0.392696 | 2_3:-45351237 | Msa0293840:CDS |
| GTTGATCCTGAATGGTTTGC+TGG | 0.393927 | 2_3:-45351159 | Msa0293840:CDS |
| AAGGAAGACGAGCCGGGGCT+TGG | 0.395166 | 2_3:+45351480 | None:intergenic |
| ACTATCTGACGGCCAGGGCT+TGG | 0.399313 | 2_3:+45351180 | None:intergenic |
| GAGCTCAGGGGAGGTGTGAC+AGG | 0.403615 | 2_3:+45351306 | None:intergenic |
| CATCTGCTACAAATTCTTCA+TGG | 0.405598 | 2_3:+45350878 | None:intergenic |
| AAATAAGGATGAGGAAGTTT+CGG | 0.409483 | 2_3:+45351351 | None:intergenic |
| CATTTGGGATTGTGAAGCCT+TGG | 0.410546 | 2_3:-45350915 | Msa0293840:CDS |
| CTTGGAAAGGAAGACGAGCC+GGG | 0.422488 | 2_3:+45351474 | None:intergenic |
| ACGGCCAGGGCTTGGAGGAC+CGG | 0.427775 | 2_3:+45351188 | None:intergenic |
| TCAAAGCCTGCTGCAATAGC+TGG | 0.436153 | 2_3:+45351000 | None:intergenic |
| GAACATGCCCCTGACTGTCC+AGG | 0.438349 | 2_3:+45351024 | None:intergenic |
| TTCTAGCAGTCGGAGAGCTC+AGG | 0.440476 | 2_3:+45351292 | None:intergenic |
| CATCTTCCTTGAAGGCAAAT+GGG | 0.441986 | 2_3:+45351079 | None:intergenic |
| TCTGAGATGGCTTCAGACAT+TGG | 0.466820 | 2_3:+45350961 | None:intergenic |
| AGATTGAATGTCGGAGAAGT+TGG | 0.467632 | 2_3:+45351114 | None:intergenic |
| TGTTCTCCAGCTATTGCAGC+AGG | 0.468934 | 2_3:-45351006 | Msa0293840:CDS |
| GGGCTTGGAGGACCGGAAGA+AGG | 0.476639 | 2_3:+45351195 | None:intergenic |
| TGGATCCTTTCTCCTTCCCA+AGG | 0.477640 | 2_3:+45350898 | None:intergenic |
| CAGGCAGCGGTTCGCGCATG+TGG | 0.479649 | 2_3:-45351050 | Msa0293840:CDS |
| GCGTTACGATTTGCAGCGTA+AGG | 0.480138 | 2_3:+45351438 | None:intergenic |
| ATGATCAATCTGCACGGCCC+GGG | 0.481435 | 2_3:-45351245 | Msa0293840:CDS |
| ATCTGACGGCCAGGGCTTGG+AGG | 0.481702 | 2_3:+45351183 | None:intergenic |
| GTCAGATAGTTGATCCTGAA+TGG | 0.488622 | 2_3:-45351167 | Msa0293840:CDS |
| ATTTGGGATTGTGAAGCCTT+GGG | 0.491602 | 2_3:-45350914 | Msa0293840:CDS |
| TCTTCCGGTCCTCCAAGCCC+TGG | 0.498896 | 2_3:-45351192 | Msa0293840:CDS |
| AAATGCAAATTCATCTGAGA+TGG | 0.501657 | 2_3:+45350948 | None:intergenic |
| GATGATCAATCTGCACGGCC+CGG | 0.503778 | 2_3:-45351246 | Msa0293840:CDS |
| TTGGAGGACCGGAAGAAGGC+AGG | 0.505728 | 2_3:+45351199 | None:intergenic |
| TGAAGCCTTGGGAAGGAGAA+AGG | 0.506728 | 2_3:-45350903 | Msa0293840:CDS |
| GGATCAACTATCTGACGGCC+AGG | 0.508622 | 2_3:+45351174 | None:intergenic |
| ATGGTAATTCTCTCATTCCA+TGG | 0.516736 | 2_3:-45351413 | Msa0293840:CDS |
| AGGTGTGACAGGAGCACTGA+TGG | 0.518748 | 2_3:+45351317 | None:intergenic |
| TAAGGGGATGATGATGGACT+TGG | 0.522354 | 2_3:+45351456 | None:intergenic |
| GAGAACATGGATATGGTTGG+TGG | 0.530636 | 2_3:-45351537 | None:intergenic |
| CGTTACGATTTGCAGCGTAA+GGG | 0.534170 | 2_3:+45351439 | None:intergenic |
| AAGACGAGCCGGGGCTTGGA+TGG | 0.534291 | 2_3:+45351484 | None:intergenic |
| GTTACGATTTGCAGCGTAAG+GGG | 0.536907 | 2_3:+45351440 | None:intergenic |
| GCTGCAAATCGTAACGCTGA+TGG | 0.540162 | 2_3:-45351432 | Msa0293840:CDS |
| TCTAGCAGTCGGAGAGCTCA+GGG | 0.554727 | 2_3:+45351293 | None:intergenic |
| ACTTGGAAAGGAAGACGAGC+CGG | 0.555927 | 2_3:+45351473 | None:intergenic |
| AACATGCCCCTGACTGTCCA+GGG | 0.556233 | 2_3:+45351025 | None:intergenic |
| CCACTATGAAAATAAGGATG+AGG | 0.557357 | 2_3:+45351342 | None:intergenic |
| GTAATGTTGTCCAGTCCACC+CGG | 0.557358 | 2_3:+45351227 | None:intergenic |
| GGTTCGCGCATGTGGACCCC+TGG | 0.559214 | 2_3:-45351042 | Msa0293840:CDS |
| GGATGATGATGGACTTGGAA+AGG | 0.559261 | 2_3:+45351461 | None:intergenic |
| TCATCTTACCATCCAAGCCC+CGG | 0.562153 | 2_3:-45351492 | Msa0293840:CDS |
| GCAGCGTAAGGGGATGATGA+TGG | 0.565277 | 2_3:+45351450 | None:intergenic |
| ATCAATCTGCACGGCCCGGG+TGG | 0.570226 | 2_3:-45351242 | Msa0293840:CDS |
| TTGATCCTGAATGGTTTGCT+GGG | 0.572973 | 2_3:-45351158 | Msa0293840:CDS |
| TGTGGACCCCTGGACAGTCA+GGG | 0.577345 | 2_3:-45351032 | Msa0293840:CDS |
| GGGATTGTGAAGCCTTGGGA+AGG | 0.580106 | 2_3:-45350910 | Msa0293840:CDS |
| TTAGAGAACATGGATATGGT+TGG | 0.590409 | 2_3:-45351540 | None:intergenic |
| AGGACCGGAAGAAGGCAGGA+AGG | 0.591677 | 2_3:+45351203 | None:intergenic |
| GTGGACCCCTGGACAGTCAG+GGG | 0.607774 | 2_3:-45351031 | Msa0293840:CDS |
| CGAGATACAAGATTGAATGT+CGG | 0.609297 | 2_3:+45351105 | None:intergenic |
| CTTGGATGGTAAGATGAACA+AGG | 0.613106 | 2_3:+45351498 | None:intergenic |
| GATCAACTATCTGACGGCCA+GGG | 0.614613 | 2_3:+45351175 | None:intergenic |
| AATCGCGGTGTTCTAGCAGT+CGG | 0.621032 | 2_3:+45351282 | None:intergenic |
| TTGGAAAGGAAGACGAGCCG+GGG | 0.625038 | 2_3:+45351475 | None:intergenic |
| CTGAAGATGAAGCTGTGGAG+AGG | 0.631008 | 2_3:+45351382 | None:intergenic |
| GCAGTCGGAGAGCTCAGGGG+AGG | 0.643740 | 2_3:+45351297 | None:intergenic |
| TGATCCTGAAGATGAAGCTG+TGG | 0.648099 | 2_3:+45351377 | None:intergenic |
| GGAGAAGTTGGACTAGCATG+TGG | 0.648324 | 2_3:+45351126 | None:intergenic |
| TAATGTTGTCCAGTCCACCC+GGG | 0.661081 | 2_3:+45351228 | None:intergenic |
| ACATGCCCCTGACTGTCCAG+GGG | 0.666992 | 2_3:+45351026 | None:intergenic |
| CTAGCAGTCGGAGAGCTCAG+GGG | 0.684940 | 2_3:+45351294 | None:intergenic |
| ATTCAGGATCAACTATCTGA+CGG | 0.695991 | 2_3:+45351169 | None:intergenic |
| TTGGATGGTAAGATGAACAA+GGG | 0.701552 | 2_3:+45351499 | None:intergenic |
| ACTTCGATGATCAATCTGCA+CGG | 0.712290 | 2_3:-45351251 | Msa0293840:CDS |
| TCGAAGTCAGCATTCAATCG+CGG | 0.720698 | 2_3:+45351267 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGAATATTTAATTTGTAATA+GGG | - | chr2_3:45351037-45351056 | Msa0293840:CDS | 10.0% |
| !!! | TGAATATTTAATTTGTAATA+GGG | - | chr2_3:45351037-45351056 | Msa0293840:CDS | 10.0% |
| !!! | TTACGATATTTTGAAAATTT+TGG | + | chr2_3:45350642-45350661 | None:intergenic | 15.0% |
| !!! | GTGAATATTTAATTTGTAAT+AGG | - | chr2_3:45351036-45351055 | Msa0293840:CDS | 15.0% |
| !!! | TTACGATATTTTGAAAATTT+TGG | + | chr2_3:45350642-45350661 | None:intergenic | 15.0% |
| !!! | GTGAATATTTAATTTGTAAT+AGG | - | chr2_3:45351036-45351055 | Msa0293840:CDS | 15.0% |
| !! | ATTATCATTATCATCATTGT+AGG | - | chr2_3:45349982-45350001 | Msa0293840:intron | 20.0% |
| !! | ACATAAACATTAACTTATGT+TGG | - | chr2_3:45350337-45350356 | Msa0293840:intron | 20.0% |
| !! | TACTATATACATGTTTAGTT+AGG | - | chr2_3:45350458-45350477 | Msa0293840:intron | 20.0% |
| !! | TAGTACTATACTTTATCAAT+TGG | - | chr2_3:45350548-45350567 | Msa0293840:intron | 20.0% |
| !!! | TTAATTTGTAATAGGGTTTT+TGG | - | chr2_3:45351044-45351063 | Msa0293840:CDS | 20.0% |
| !!! | TGAAAAAGTATGAAGAAATA+TGG | + | chr2_3:45351281-45351300 | None:intergenic | 20.0% |
| !!! | TGTAAATTGTATTGGTTATT+TGG | - | chr2_3:45351492-45351511 | Msa0293840:CDS | 20.0% |
| !! | ATTATCATTATCATCATTGT+AGG | - | chr2_3:45349982-45350001 | Msa0293840:intron | 20.0% |
| !! | ACATAAACATTAACTTATGT+TGG | - | chr2_3:45350337-45350356 | Msa0293840:intron | 20.0% |
| !! | TACTATATACATGTTTAGTT+AGG | - | chr2_3:45350458-45350477 | Msa0293840:intron | 20.0% |
| !! | TAGTACTATACTTTATCAAT+TGG | - | chr2_3:45350548-45350567 | Msa0293840:intron | 20.0% |
| !!! | TTAATTTGTAATAGGGTTTT+TGG | - | chr2_3:45351044-45351063 | Msa0293840:CDS | 20.0% |
| !!! | TGAAAAAGTATGAAGAAATA+TGG | + | chr2_3:45351281-45351300 | None:intergenic | 20.0% |
| !!! | TGTAAATTGTATTGGTTATT+TGG | - | chr2_3:45351492-45351511 | Msa0293840:CDS | 20.0% |
| !! | TGATAATGATAATAAGTACC+TGG | + | chr2_3:45349975-45349994 | None:intergenic | 25.0% |
| ! | ATGTAAAGGAAAAATTGCAA+AGG | + | chr2_3:45350430-45350449 | None:intergenic | 25.0% |
| !! | TGCAATTTTTCCTTTACATT+TGG | - | chr2_3:45350431-45350450 | Msa0293840:intron | 25.0% |
| ! | ACAACAATGATGAAATGAAT+GGG | + | chr2_3:45350502-45350521 | None:intergenic | 25.0% |
| ! | TACAACAATGATGAAATGAA+TGG | + | chr2_3:45350503-45350522 | None:intergenic | 25.0% |
| ! | GTGAGAAATATTACAATAGA+AGG | + | chr2_3:45350700-45350719 | None:intergenic | 25.0% |
| !!! | TGATTTTTTAGAAAACACGA+GGG | + | chr2_3:45350972-45350991 | None:intergenic | 25.0% |
| !!! | TGTGTGTGTAAATTTTTAGA+AGG | + | chr2_3:45351126-45351145 | None:intergenic | 25.0% |
| ! | AGAGTTAGAGAAAAAAAAAC+AGG | + | chr2_3:45351225-45351244 | None:intergenic | 25.0% |
| ! | AAAGTATGAAGAAATATGGA+TGG | + | chr2_3:45351277-45351296 | None:intergenic | 25.0% |
| !! | TGATAATGATAATAAGTACC+TGG | + | chr2_3:45349975-45349994 | None:intergenic | 25.0% |
| ! | ATGTAAAGGAAAAATTGCAA+AGG | + | chr2_3:45350430-45350449 | None:intergenic | 25.0% |
| !! | TGCAATTTTTCCTTTACATT+TGG | - | chr2_3:45350431-45350450 | Msa0293840:intron | 25.0% |
| ! | ACAACAATGATGAAATGAAT+GGG | + | chr2_3:45350502-45350521 | None:intergenic | 25.0% |
| ! | TACAACAATGATGAAATGAA+TGG | + | chr2_3:45350503-45350522 | None:intergenic | 25.0% |
| ! | GTGAGAAATATTACAATAGA+AGG | + | chr2_3:45350700-45350719 | None:intergenic | 25.0% |
| !!! | TGATTTTTTAGAAAACACGA+GGG | + | chr2_3:45350972-45350991 | None:intergenic | 25.0% |
| !!! | TGTGTGTGTAAATTTTTAGA+AGG | + | chr2_3:45351126-45351145 | None:intergenic | 25.0% |
| ! | AGAGTTAGAGAAAAAAAAAC+AGG | + | chr2_3:45351225-45351244 | None:intergenic | 25.0% |
| ! | AAAGTATGAAGAAATATGGA+TGG | + | chr2_3:45351277-45351296 | None:intergenic | 25.0% |
| AAATAAGGATGAGGAAGTTT+CGG | + | chr2_3:45349449-45349468 | None:intergenic | 30.0% | |
| AAATGCAAATTCATCTGAGA+TGG | + | chr2_3:45349852-45349871 | None:intergenic | 30.0% | |
| ATCTCAGATGAATTTGCATT+TGG | - | chr2_3:45349851-45349870 | Msa0293840:intron | 30.0% | |
| TGTCAAAAGAACATTTCAGA+AGG | + | chr2_3:45350185-45350204 | None:intergenic | 30.0% | |
| !!! | TTCTGAAATGTTCTTTTGAC+AGG | - | chr2_3:45350184-45350203 | Msa0293840:intron | 30.0% |
| CAGGTGAATTCTTTGTAAAT+AGG | - | chr2_3:45350203-45350222 | Msa0293840:intron | 30.0% | |
| !!! | ACATTTTTTGTAATCGAGCT+CGG | + | chr2_3:45350313-45350332 | None:intergenic | 30.0% |
| TGTTGAGTAAGAAATGTTTG+AGG | - | chr2_3:45350363-45350382 | Msa0293840:intron | 30.0% | |
| ! | GTAAGAAATGTTTGAGGTAA+TGG | - | chr2_3:45350369-45350388 | Msa0293840:intron | 30.0% |
| ATAGTACTAGCCAAATGTAA+AGG | + | chr2_3:45350444-45350463 | None:intergenic | 30.0% | |
| ! | GTCTTGTTAAACCTTATCAT+TGG | - | chr2_3:45350524-45350543 | Msa0293840:intron | 30.0% |
| TATAGTACTAGCCAATGATA+AGG | + | chr2_3:45350538-45350557 | None:intergenic | 30.0% | |
| CTATACTTTATCAATTGGCT+TGG | - | chr2_3:45350553-45350572 | Msa0293840:intron | 30.0% | |
| !! | AACATTCTCTAAAGCTATTC+AGG | + | chr2_3:45350595-45350614 | None:intergenic | 30.0% |
| CAACCTATTAGCTAATTCAA+TGG | - | chr2_3:45350616-45350635 | Msa0293840:intron | 30.0% | |
| AAATATTACAATAGAAGGCC+GGG | + | chr2_3:45350695-45350714 | None:intergenic | 30.0% | |
| GAAATATTACAATAGAAGGC+CGG | + | chr2_3:45350696-45350715 | None:intergenic | 30.0% | |
| ! | TAAACTCCTTTTATGACGAA+TGG | - | chr2_3:45350751-45350770 | Msa0293840:intron | 30.0% |
| CGGGTTAACAGTAAAAAAAA+AGG | - | chr2_3:45350874-45350893 | Msa0293840:intron | 30.0% | |
| !!! | GTGATTTTTTAGAAAACACG+AGG | + | chr2_3:45350973-45350992 | None:intergenic | 30.0% |
| !! | GTGTGTAAATTTTTAGAAGG+TGG | + | chr2_3:45351123-45351142 | None:intergenic | 30.0% |
| !!! | GTTTTTTCCATTTGAAAGCA+TGG | + | chr2_3:45351160-45351179 | None:intergenic | 30.0% |
| ! | GACAAAAACATGTTTTCTCT+TGG | + | chr2_3:45351356-45351375 | None:intergenic | 30.0% |
| ! | TTTTGTCCATAAACACACAT+CGG | - | chr2_3:45351369-45351388 | Msa0293840:CDS | 30.0% |
| GTGCATAGTGTAAATTGTAT+TGG | - | chr2_3:45351484-45351503 | Msa0293840:CDS | 30.0% | |
| AAATAAGGATGAGGAAGTTT+CGG | + | chr2_3:45349449-45349468 | None:intergenic | 30.0% | |
| AAATGCAAATTCATCTGAGA+TGG | + | chr2_3:45349852-45349871 | None:intergenic | 30.0% | |
| ATCTCAGATGAATTTGCATT+TGG | - | chr2_3:45349851-45349870 | Msa0293840:intron | 30.0% | |
| TGTCAAAAGAACATTTCAGA+AGG | + | chr2_3:45350185-45350204 | None:intergenic | 30.0% | |
| !!! | TTCTGAAATGTTCTTTTGAC+AGG | - | chr2_3:45350184-45350203 | Msa0293840:intron | 30.0% |
| CAGGTGAATTCTTTGTAAAT+AGG | - | chr2_3:45350203-45350222 | Msa0293840:intron | 30.0% | |
| !!! | ACATTTTTTGTAATCGAGCT+CGG | + | chr2_3:45350313-45350332 | None:intergenic | 30.0% |
| TGTTGAGTAAGAAATGTTTG+AGG | - | chr2_3:45350363-45350382 | Msa0293840:intron | 30.0% | |
| ! | GTAAGAAATGTTTGAGGTAA+TGG | - | chr2_3:45350369-45350388 | Msa0293840:intron | 30.0% |
| ATAGTACTAGCCAAATGTAA+AGG | + | chr2_3:45350444-45350463 | None:intergenic | 30.0% | |
| ! | GTCTTGTTAAACCTTATCAT+TGG | - | chr2_3:45350524-45350543 | Msa0293840:intron | 30.0% |
| TATAGTACTAGCCAATGATA+AGG | + | chr2_3:45350538-45350557 | None:intergenic | 30.0% | |
| CTATACTTTATCAATTGGCT+TGG | - | chr2_3:45350553-45350572 | Msa0293840:intron | 30.0% | |
| !! | AACATTCTCTAAAGCTATTC+AGG | + | chr2_3:45350595-45350614 | None:intergenic | 30.0% |
| CAACCTATTAGCTAATTCAA+TGG | - | chr2_3:45350616-45350635 | Msa0293840:intron | 30.0% | |
| AAATATTACAATAGAAGGCC+GGG | + | chr2_3:45350695-45350714 | None:intergenic | 30.0% | |
| GAAATATTACAATAGAAGGC+CGG | + | chr2_3:45350696-45350715 | None:intergenic | 30.0% | |
| ! | TAAACTCCTTTTATGACGAA+TGG | - | chr2_3:45350751-45350770 | Msa0293840:intron | 30.0% |
| CGGGTTAACAGTAAAAAAAA+AGG | - | chr2_3:45350874-45350893 | Msa0293840:intron | 30.0% | |
| !!! | GTGATTTTTTAGAAAACACG+AGG | + | chr2_3:45350973-45350992 | None:intergenic | 30.0% |
| !! | GTGTGTAAATTTTTAGAAGG+TGG | + | chr2_3:45351123-45351142 | None:intergenic | 30.0% |
| !!! | GTTTTTTCCATTTGAAAGCA+TGG | + | chr2_3:45351160-45351179 | None:intergenic | 30.0% |
| ! | GACAAAAACATGTTTTCTCT+TGG | + | chr2_3:45351356-45351375 | None:intergenic | 30.0% |
| ! | TTTTGTCCATAAACACACAT+CGG | - | chr2_3:45351369-45351388 | Msa0293840:CDS | 30.0% |
| GTGCATAGTGTAAATTGTAT+TGG | - | chr2_3:45351484-45351503 | Msa0293840:CDS | 30.0% | |
| TTGGATGGTAAGATGAACAA+GGG | + | chr2_3:45349301-45349320 | None:intergenic | 35.0% | |
| ATGGTAATTCTCTCATTCCA+TGG | - | chr2_3:45349384-45349403 | Msa0293840:intron | 35.0% | |
| CCACTATGAAAATAAGGATG+AGG | + | chr2_3:45349458-45349477 | None:intergenic | 35.0% | |
| !!! | CCTCATCCTTATTTTCATAG+TGG | - | chr2_3:45349455-45349474 | Msa0293840:intron | 35.0% |
| ATGGAGCCACTATGAAAATA+AGG | + | chr2_3:45349464-45349483 | None:intergenic | 35.0% | |
| ATTCAGGATCAACTATCTGA+CGG | + | chr2_3:45349631-45349650 | None:intergenic | 35.0% | |
| CGAGATACAAGATTGAATGT+CGG | + | chr2_3:45349695-45349714 | None:intergenic | 35.0% | |
| !! | TGAAAAAGCATCTTCCTTGA+AGG | + | chr2_3:45349729-45349748 | None:intergenic | 35.0% |
| !!! | TTCAAGGAAGATGCTTTTTC+AGG | - | chr2_3:45349728-45349747 | Msa0293840:intron | 35.0% |
| CATTTGGAAGCAACACATTT+GGG | - | chr2_3:45349867-45349886 | Msa0293840:intron | 35.0% | |
| CATCTGCTACAAATTCTTCA+TGG | + | chr2_3:45349922-45349941 | None:intergenic | 35.0% | |
| ATTGACAAAGACATGAACAC+GGG | + | chr2_3:45350118-45350137 | None:intergenic | 35.0% | |
| CATTGACAAAGACATGAACA+CGG | + | chr2_3:45350119-45350138 | None:intergenic | 35.0% | |
| ! | AGAAATGTTTGAGGTAATGG+AGG | - | chr2_3:45350372-45350391 | Msa0293840:intron | 35.0% |
| TATACATGTTTAGTTAGGCG+TGG | - | chr2_3:45350463-45350482 | Msa0293840:intron | 35.0% | |
| !!! | AGCTATTCAGGTTTTTTCAG+TGG | + | chr2_3:45350583-45350602 | None:intergenic | 35.0% |
| TGGCCATTGAATTAGCTAAT+AGG | + | chr2_3:45350622-45350641 | None:intergenic | 35.0% | |
| ! | TCCTTTTATGACGAATGGTT+CGG | - | chr2_3:45350756-45350775 | Msa0293840:intron | 35.0% |
| ! | GAAGAACCAAGTTTGATTTC+TGG | - | chr2_3:45350778-45350797 | Msa0293840:intron | 35.0% |
| TAGTCACCAGAAATCAAACT+TGG | + | chr2_3:45350787-45350806 | None:intergenic | 35.0% | |
| ! | CTAGCAATTTGAAGTTCGAT+CGG | + | chr2_3:45350834-45350853 | None:intergenic | 35.0% |
| ! | CTCGCGCAAATTAGTTTATT+TGG | + | chr2_3:45350936-45350955 | None:intergenic | 35.0% |
| TTTAGAAAACACGAGGGATT+GGG | + | chr2_3:45350966-45350985 | None:intergenic | 35.0% | |
| !! | TTTTAGAAAACACGAGGGAT+TGG | + | chr2_3:45350967-45350986 | None:intergenic | 35.0% |
| !! | TTGGATGCATCTTTTAGCTA+TGG | - | chr2_3:45351063-45351082 | Msa0293840:CDS | 35.0% |
| TTCTGAACCATGCTTTCAAA+TGG | - | chr2_3:45351150-45351169 | Msa0293840:CDS | 35.0% | |
| CAAATGGAAAAAACAGCTTG+TGG | - | chr2_3:45351166-45351185 | Msa0293840:CDS | 35.0% | |
| GTAGGGATTGTTTACCTTTA+GGG | - | chr2_3:45351188-45351207 | Msa0293840:CDS | 35.0% | |
| ! | TGGTGATTTTAGGCAGAAAA+AGG | + | chr2_3:45351314-45351333 | None:intergenic | 35.0% |
| TTCTGCCTAAAATCACCAAA+AGG | - | chr2_3:45351316-45351335 | Msa0293840:CDS | 35.0% | |
| TTGGATGGTAAGATGAACAA+GGG | + | chr2_3:45349301-45349320 | None:intergenic | 35.0% | |
| ATGGTAATTCTCTCATTCCA+TGG | - | chr2_3:45349384-45349403 | Msa0293840:intron | 35.0% | |
| CCACTATGAAAATAAGGATG+AGG | + | chr2_3:45349458-45349477 | None:intergenic | 35.0% | |
| !!! | CCTCATCCTTATTTTCATAG+TGG | - | chr2_3:45349455-45349474 | Msa0293840:intron | 35.0% |
| ATGGAGCCACTATGAAAATA+AGG | + | chr2_3:45349464-45349483 | None:intergenic | 35.0% | |
| ATTCAGGATCAACTATCTGA+CGG | + | chr2_3:45349631-45349650 | None:intergenic | 35.0% | |
| CGAGATACAAGATTGAATGT+CGG | + | chr2_3:45349695-45349714 | None:intergenic | 35.0% | |
| !! | TGAAAAAGCATCTTCCTTGA+AGG | + | chr2_3:45349729-45349748 | None:intergenic | 35.0% |
| !!! | TTCAAGGAAGATGCTTTTTC+AGG | - | chr2_3:45349728-45349747 | Msa0293840:intron | 35.0% |
| CATTTGGAAGCAACACATTT+GGG | - | chr2_3:45349867-45349886 | Msa0293840:intron | 35.0% | |
| CATCTGCTACAAATTCTTCA+TGG | + | chr2_3:45349922-45349941 | None:intergenic | 35.0% | |
| ATTGACAAAGACATGAACAC+GGG | + | chr2_3:45350118-45350137 | None:intergenic | 35.0% | |
| CATTGACAAAGACATGAACA+CGG | + | chr2_3:45350119-45350138 | None:intergenic | 35.0% | |
| ! | AGAAATGTTTGAGGTAATGG+AGG | - | chr2_3:45350372-45350391 | Msa0293840:intron | 35.0% |
| TATACATGTTTAGTTAGGCG+TGG | - | chr2_3:45350463-45350482 | Msa0293840:intron | 35.0% | |
| !!! | AGCTATTCAGGTTTTTTCAG+TGG | + | chr2_3:45350583-45350602 | None:intergenic | 35.0% |
| TGGCCATTGAATTAGCTAAT+AGG | + | chr2_3:45350622-45350641 | None:intergenic | 35.0% | |
| ! | TCCTTTTATGACGAATGGTT+CGG | - | chr2_3:45350756-45350775 | Msa0293840:intron | 35.0% |
| ! | GAAGAACCAAGTTTGATTTC+TGG | - | chr2_3:45350778-45350797 | Msa0293840:intron | 35.0% |
| TAGTCACCAGAAATCAAACT+TGG | + | chr2_3:45350787-45350806 | None:intergenic | 35.0% | |
| ! | CTAGCAATTTGAAGTTCGAT+CGG | + | chr2_3:45350834-45350853 | None:intergenic | 35.0% |
| ! | CTCGCGCAAATTAGTTTATT+TGG | + | chr2_3:45350936-45350955 | None:intergenic | 35.0% |
| TTTAGAAAACACGAGGGATT+GGG | + | chr2_3:45350966-45350985 | None:intergenic | 35.0% | |
| !! | TTTTAGAAAACACGAGGGAT+TGG | + | chr2_3:45350967-45350986 | None:intergenic | 35.0% |
| !! | TTGGATGCATCTTTTAGCTA+TGG | - | chr2_3:45351063-45351082 | Msa0293840:CDS | 35.0% |
| TTCTGAACCATGCTTTCAAA+TGG | - | chr2_3:45351150-45351169 | Msa0293840:CDS | 35.0% | |
| CAAATGGAAAAAACAGCTTG+TGG | - | chr2_3:45351166-45351185 | Msa0293840:CDS | 35.0% | |
| GTAGGGATTGTTTACCTTTA+GGG | - | chr2_3:45351188-45351207 | Msa0293840:CDS | 35.0% | |
| ! | TGGTGATTTTAGGCAGAAAA+AGG | + | chr2_3:45351314-45351333 | None:intergenic | 35.0% |
| TTCTGCCTAAAATCACCAAA+AGG | - | chr2_3:45351316-45351335 | Msa0293840:CDS | 35.0% | |
| CTTGGATGGTAAGATGAACA+AGG | + | chr2_3:45349302-45349321 | None:intergenic | 40.0% | |
| ACTTCGATGATCAATCTGCA+CGG | - | chr2_3:45349546-45349565 | Msa0293840:intron | 40.0% | |
| GTCAGATAGTTGATCCTGAA+TGG | - | chr2_3:45349630-45349649 | Msa0293840:intron | 40.0% | |
| !! | TTGATCCTGAATGGTTTGCT+GGG | - | chr2_3:45349639-45349658 | Msa0293840:intron | 40.0% |
| AGATTGAATGTCGGAGAAGT+TGG | + | chr2_3:45349686-45349705 | None:intergenic | 40.0% | |
| CATCTTCCTTGAAGGCAAAT+GGG | + | chr2_3:45349721-45349740 | None:intergenic | 40.0% | |
| GCATTTGGAAGCAACACATT+TGG | - | chr2_3:45349866-45349885 | Msa0293840:intron | 40.0% | |
| ! | ATTTGGGATTGTGAAGCCTT+GGG | - | chr2_3:45349883-45349902 | Msa0293840:intron | 40.0% |
| GATGATCTTGAACTCACACT+TGG | - | chr2_3:45349938-45349957 | Msa0293840:intron | 40.0% | |
| TAAGAAGTTCACTCAAGACC+CGG | - | chr2_3:45350674-45350693 | Msa0293840:intron | 40.0% | |
| TCTCACTCAAACCAAGTGAT+TGG | - | chr2_3:45350714-45350733 | Msa0293840:intron | 40.0% | |
| CTCACTCAAACCAAGTGATT+GGG | - | chr2_3:45350715-45350734 | Msa0293840:intron | 40.0% | |
| TCCGAACCATTCGTCATAAA+AGG | + | chr2_3:45350760-45350779 | None:intergenic | 40.0% | |
| ! | CAATTTGAAGTTCGATCGGT+GGG | + | chr2_3:45350830-45350849 | None:intergenic | 40.0% |
| CGATCGAACTTCAAATTGCT+AGG | - | chr2_3:45350832-45350851 | Msa0293840:intron | 40.0% | |
| TACTGTTAACCCGATTCCTA+GGG | + | chr2_3:45350867-45350886 | None:intergenic | 40.0% | |
| TTACTGTTAACCCGATTCCT+AGG | + | chr2_3:45350868-45350887 | None:intergenic | 40.0% | |
| TGGAAAAAACAGCTTGTGGT+AGG | - | chr2_3:45351170-45351189 | Msa0293840:CDS | 40.0% | |
| GGAAAAAACAGCTTGTGGTA+GGG | - | chr2_3:45351171-45351190 | Msa0293840:CDS | 40.0% | |
| GGTAGGGATTGTTTACCTTT+AGG | - | chr2_3:45351187-45351206 | Msa0293840:CDS | 40.0% | |
| ! | GGATTGTTTACCTTTAGGGA+GGG | - | chr2_3:45351192-45351211 | Msa0293840:CDS | 40.0% |
| !! | CTCTGCCTTTTGGTGATTTT+AGG | + | chr2_3:45351324-45351343 | None:intergenic | 40.0% |
| ! | GATATAGACTCTCTGCCTTT+TGG | + | chr2_3:45351334-45351353 | None:intergenic | 40.0% |
| ! | GTTGTACCGATGTGTGTTTA+TGG | + | chr2_3:45351378-45351397 | None:intergenic | 40.0% |
| AACCGTTATTTGTACTGCCA+AGG | - | chr2_3:45351403-45351422 | Msa0293840:CDS | 40.0% | |
| CTCCTTGGCAGTACAAATAA+CGG | + | chr2_3:45351408-45351427 | None:intergenic | 40.0% | |
| CTTGGATGGTAAGATGAACA+AGG | + | chr2_3:45349302-45349321 | None:intergenic | 40.0% | |
| ACTTCGATGATCAATCTGCA+CGG | - | chr2_3:45349546-45349565 | Msa0293840:intron | 40.0% | |
| GTCAGATAGTTGATCCTGAA+TGG | - | chr2_3:45349630-45349649 | Msa0293840:intron | 40.0% | |
| !! | TTGATCCTGAATGGTTTGCT+GGG | - | chr2_3:45349639-45349658 | Msa0293840:intron | 40.0% |
| AGATTGAATGTCGGAGAAGT+TGG | + | chr2_3:45349686-45349705 | None:intergenic | 40.0% | |
| CATCTTCCTTGAAGGCAAAT+GGG | + | chr2_3:45349721-45349740 | None:intergenic | 40.0% | |
| GCATTTGGAAGCAACACATT+TGG | - | chr2_3:45349866-45349885 | Msa0293840:intron | 40.0% | |
| ! | ATTTGGGATTGTGAAGCCTT+GGG | - | chr2_3:45349883-45349902 | Msa0293840:intron | 40.0% |
| GATGATCTTGAACTCACACT+TGG | - | chr2_3:45349938-45349957 | Msa0293840:intron | 40.0% | |
| TAAGAAGTTCACTCAAGACC+CGG | - | chr2_3:45350674-45350693 | Msa0293840:intron | 40.0% | |
| TCTCACTCAAACCAAGTGAT+TGG | - | chr2_3:45350714-45350733 | Msa0293840:intron | 40.0% | |
| CTCACTCAAACCAAGTGATT+GGG | - | chr2_3:45350715-45350734 | Msa0293840:intron | 40.0% | |
| TCCGAACCATTCGTCATAAA+AGG | + | chr2_3:45350760-45350779 | None:intergenic | 40.0% | |
| ! | CAATTTGAAGTTCGATCGGT+GGG | + | chr2_3:45350830-45350849 | None:intergenic | 40.0% |
| CGATCGAACTTCAAATTGCT+AGG | - | chr2_3:45350832-45350851 | Msa0293840:intron | 40.0% | |
| TACTGTTAACCCGATTCCTA+GGG | + | chr2_3:45350867-45350886 | None:intergenic | 40.0% | |
| TTACTGTTAACCCGATTCCT+AGG | + | chr2_3:45350868-45350887 | None:intergenic | 40.0% | |
| TGGAAAAAACAGCTTGTGGT+AGG | - | chr2_3:45351170-45351189 | Msa0293840:CDS | 40.0% | |
| GGAAAAAACAGCTTGTGGTA+GGG | - | chr2_3:45351171-45351190 | Msa0293840:CDS | 40.0% | |
| GGTAGGGATTGTTTACCTTT+AGG | - | chr2_3:45351187-45351206 | Msa0293840:CDS | 40.0% | |
| ! | GGATTGTTTACCTTTAGGGA+GGG | - | chr2_3:45351192-45351211 | Msa0293840:CDS | 40.0% |
| !! | CTCTGCCTTTTGGTGATTTT+AGG | + | chr2_3:45351324-45351343 | None:intergenic | 40.0% |
| ! | GATATAGACTCTCTGCCTTT+TGG | + | chr2_3:45351334-45351353 | None:intergenic | 40.0% |
| ! | GTTGTACCGATGTGTGTTTA+TGG | + | chr2_3:45351378-45351397 | None:intergenic | 40.0% |
| AACCGTTATTTGTACTGCCA+AGG | - | chr2_3:45351403-45351422 | Msa0293840:CDS | 40.0% | |
| CTCCTTGGCAGTACAAATAA+CGG | + | chr2_3:45351408-45351427 | None:intergenic | 40.0% | |
| !! | GGATGATGATGGACTTGGAA+AGG | + | chr2_3:45349339-45349358 | None:intergenic | 45.0% |
| !! | TAAGGGGATGATGATGGACT+TGG | + | chr2_3:45349344-45349363 | None:intergenic | 45.0% |
| GTTACGATTTGCAGCGTAAG+GGG | + | chr2_3:45349360-45349379 | None:intergenic | 45.0% | |
| CGTTACGATTTGCAGCGTAA+GGG | + | chr2_3:45349361-45349380 | None:intergenic | 45.0% | |
| TGATCCTGAAGATGAAGCTG+TGG | + | chr2_3:45349423-45349442 | None:intergenic | 45.0% | |
| TCGAAGTCAGCATTCAATCG+CGG | + | chr2_3:45349533-45349552 | None:intergenic | 45.0% | |
| ! | GTTGATCCTGAATGGTTTGC+TGG | - | chr2_3:45349638-45349657 | Msa0293840:intron | 45.0% |
| TTGATCCCAGCAAACCATTC+AGG | + | chr2_3:45349647-45349666 | None:intergenic | 45.0% | |
| GCATCTTCCTTGAAGGCAAA+TGG | + | chr2_3:45349722-45349741 | None:intergenic | 45.0% | |
| !!! | GAAGATGCTTTTTCAGGCAG+CGG | - | chr2_3:45349734-45349753 | Msa0293840:intron | 45.0% |
| ! | TCTGAGATGGCTTCAGACAT+TGG | + | chr2_3:45349839-45349858 | None:intergenic | 45.0% |
| ! | CATTTGGGATTGTGAAGCCT+TGG | - | chr2_3:45349882-45349901 | Msa0293840:intron | 45.0% |
| ! | CACTTGGTAACTCAAAGACC+AGG | - | chr2_3:45349954-45349973 | Msa0293840:intron | 45.0% |
| GTGTCTGACATTCACTGACA+CGG | - | chr2_3:45350013-45350032 | Msa0293840:intron | 45.0% | |
| CGACACAAACATGTCGACAT+TGG | + | chr2_3:45350092-45350111 | None:intergenic | 45.0% | |
| ACTTGTGTTGCAAACCTCCT+AGG | - | chr2_3:45350239-45350258 | Msa0293840:intron | 45.0% | |
| TGTAATCGAGCTCGGTATCT+TGG | + | chr2_3:45350305-45350324 | None:intergenic | 45.0% | |
| !! | TTTGAGGTAATGGAGGTGAG+TGG | - | chr2_3:45350379-45350398 | Msa0293840:intron | 45.0% |
| ! | GCAATTTGAAGTTCGATCGG+TGG | + | chr2_3:45350831-45350850 | None:intergenic | 45.0% |
| ACTGTTAACCCGATTCCTAG+GGG | + | chr2_3:45350866-45350885 | None:intergenic | 45.0% | |
| ! | GGGATTGTTTACCTTTAGGG+AGG | - | chr2_3:45351191-45351210 | Msa0293840:CDS | 45.0% |
| CGTTATTTGTACTGCCAAGG+AGG | - | chr2_3:45351406-45351425 | Msa0293840:CDS | 45.0% | |
| !! | GGATGATGATGGACTTGGAA+AGG | + | chr2_3:45349339-45349358 | None:intergenic | 45.0% |
| !! | TAAGGGGATGATGATGGACT+TGG | + | chr2_3:45349344-45349363 | None:intergenic | 45.0% |
| GTTACGATTTGCAGCGTAAG+GGG | + | chr2_3:45349360-45349379 | None:intergenic | 45.0% | |
| CGTTACGATTTGCAGCGTAA+GGG | + | chr2_3:45349361-45349380 | None:intergenic | 45.0% | |
| TGATCCTGAAGATGAAGCTG+TGG | + | chr2_3:45349423-45349442 | None:intergenic | 45.0% | |
| TCGAAGTCAGCATTCAATCG+CGG | + | chr2_3:45349533-45349552 | None:intergenic | 45.0% | |
| ! | GTTGATCCTGAATGGTTTGC+TGG | - | chr2_3:45349638-45349657 | Msa0293840:intron | 45.0% |
| TTGATCCCAGCAAACCATTC+AGG | + | chr2_3:45349647-45349666 | None:intergenic | 45.0% | |
| GCATCTTCCTTGAAGGCAAA+TGG | + | chr2_3:45349722-45349741 | None:intergenic | 45.0% | |
| !!! | GAAGATGCTTTTTCAGGCAG+CGG | - | chr2_3:45349734-45349753 | Msa0293840:intron | 45.0% |
| ! | TCTGAGATGGCTTCAGACAT+TGG | + | chr2_3:45349839-45349858 | None:intergenic | 45.0% |
| ! | CATTTGGGATTGTGAAGCCT+TGG | - | chr2_3:45349882-45349901 | Msa0293840:intron | 45.0% |
| ! | CACTTGGTAACTCAAAGACC+AGG | - | chr2_3:45349954-45349973 | Msa0293840:intron | 45.0% |
| GTGTCTGACATTCACTGACA+CGG | - | chr2_3:45350013-45350032 | Msa0293840:intron | 45.0% | |
| CGACACAAACATGTCGACAT+TGG | + | chr2_3:45350092-45350111 | None:intergenic | 45.0% | |
| ACTTGTGTTGCAAACCTCCT+AGG | - | chr2_3:45350239-45350258 | Msa0293840:intron | 45.0% | |
| TGTAATCGAGCTCGGTATCT+TGG | + | chr2_3:45350305-45350324 | None:intergenic | 45.0% | |
| !! | TTTGAGGTAATGGAGGTGAG+TGG | - | chr2_3:45350379-45350398 | Msa0293840:intron | 45.0% |
| ! | GCAATTTGAAGTTCGATCGG+TGG | + | chr2_3:45350831-45350850 | None:intergenic | 45.0% |
| ACTGTTAACCCGATTCCTAG+GGG | + | chr2_3:45350866-45350885 | None:intergenic | 45.0% | |
| ! | GGGATTGTTTACCTTTAGGG+AGG | - | chr2_3:45351191-45351210 | Msa0293840:CDS | 45.0% |
| CGTTATTTGTACTGCCAAGG+AGG | - | chr2_3:45351406-45351425 | Msa0293840:CDS | 45.0% | |
| TCATCTTACCATCCAAGCCC+CGG | - | chr2_3:45349305-45349324 | Msa0293840:intron | 50.0% | |
| ACTTGGAAAGGAAGACGAGC+CGG | + | chr2_3:45349327-45349346 | None:intergenic | 50.0% | |
| GCGTTACGATTTGCAGCGTA+AGG | + | chr2_3:45349362-45349381 | None:intergenic | 50.0% | |
| GCTGCAAATCGTAACGCTGA+TGG | - | chr2_3:45349365-45349384 | Msa0293840:intron | 50.0% | |
| !! | GTGGAGAGGTTTTTGAGCCA+TGG | + | chr2_3:45349404-45349423 | None:intergenic | 50.0% |
| CTGAAGATGAAGCTGTGGAG+AGG | + | chr2_3:45349418-45349437 | None:intergenic | 50.0% | |
| CTCTCCACAGCTTCATCTTC+AGG | - | chr2_3:45349416-45349435 | Msa0293840:intron | 50.0% | |
| AATCGCGGTGTTCTAGCAGT+CGG | + | chr2_3:45349518-45349537 | None:intergenic | 50.0% | |
| TAATGTTGTCCAGTCCACCC+GGG | + | chr2_3:45349572-45349591 | None:intergenic | 50.0% | |
| GTAATGTTGTCCAGTCCACC+CGG | + | chr2_3:45349573-45349592 | None:intergenic | 50.0% | |
| TACTCCTTCCTGCCTTCTTC+CGG | - | chr2_3:45349590-45349609 | Msa0293840:intron | 50.0% | |
| GATCAACTATCTGACGGCCA+GGG | + | chr2_3:45349625-45349644 | None:intergenic | 50.0% | |
| !! | GGAGAAGTTGGACTAGCATG+TGG | + | chr2_3:45349674-45349693 | None:intergenic | 50.0% |
| TCGAAGCCCATTTGCCTTCA+AGG | - | chr2_3:45349712-45349731 | Msa0293840:intron | 50.0% | |
| TGTTCTCCAGCTATTGCAGC+AGG | - | chr2_3:45349791-45349810 | Msa0293840:intron | 50.0% | |
| TCAAAGCCTGCTGCAATAGC+TGG | + | chr2_3:45349800-45349819 | None:intergenic | 50.0% | |
| TGAAGCCTTGGGAAGGAGAA+AGG | - | chr2_3:45349894-45349913 | Msa0293840:intron | 50.0% | |
| TGGATCCTTTCTCCTTCCCA+AGG | + | chr2_3:45349902-45349921 | None:intergenic | 50.0% | |
| ! | ATCACTTGCAGTGGACTCCT+AGG | + | chr2_3:45350259-45350278 | None:intergenic | 50.0% |
| AGGAGTCCACTGCAAGTGAT+CGG | - | chr2_3:45350259-45350278 | Msa0293840:intron | 50.0% | |
| ! | TACGTACCGATCACTTGCAG+TGG | + | chr2_3:45350268-45350287 | None:intergenic | 50.0% |
| ATGTTTAGTTAGGCGTGGCG+TGG | - | chr2_3:45350468-45350487 | Msa0293840:intron | 50.0% | |
| GACTCCTTTCCCCTAGGAAT+CGG | - | chr2_3:45350854-45350873 | Msa0293840:intron | 50.0% | |
| ACTCCTTTCCCCTAGGAATC+GGG | - | chr2_3:45350855-45350874 | Msa0293840:intron | 50.0% | |
| TAACCCGATTCCTAGGGGAA+AGG | + | chr2_3:45350861-45350880 | None:intergenic | 50.0% | |
| AGGTGCATTTCCCTCCCTAA+AGG | + | chr2_3:45351205-45351224 | None:intergenic | 50.0% | |
| ! | ACCCAACTTGTTTCGACCCA+GGG | + | chr2_3:45351432-45351451 | None:intergenic | 50.0% |
| TCATCTTACCATCCAAGCCC+CGG | - | chr2_3:45349305-45349324 | Msa0293840:intron | 50.0% | |
| ACTTGGAAAGGAAGACGAGC+CGG | + | chr2_3:45349327-45349346 | None:intergenic | 50.0% | |
| GCGTTACGATTTGCAGCGTA+AGG | + | chr2_3:45349362-45349381 | None:intergenic | 50.0% | |
| GCTGCAAATCGTAACGCTGA+TGG | - | chr2_3:45349365-45349384 | Msa0293840:intron | 50.0% | |
| !! | GTGGAGAGGTTTTTGAGCCA+TGG | + | chr2_3:45349404-45349423 | None:intergenic | 50.0% |
| CTGAAGATGAAGCTGTGGAG+AGG | + | chr2_3:45349418-45349437 | None:intergenic | 50.0% | |
| CTCTCCACAGCTTCATCTTC+AGG | - | chr2_3:45349416-45349435 | Msa0293840:intron | 50.0% | |
| AATCGCGGTGTTCTAGCAGT+CGG | + | chr2_3:45349518-45349537 | None:intergenic | 50.0% | |
| TAATGTTGTCCAGTCCACCC+GGG | + | chr2_3:45349572-45349591 | None:intergenic | 50.0% | |
| GTAATGTTGTCCAGTCCACC+CGG | + | chr2_3:45349573-45349592 | None:intergenic | 50.0% | |
| TACTCCTTCCTGCCTTCTTC+CGG | - | chr2_3:45349590-45349609 | Msa0293840:intron | 50.0% | |
| GATCAACTATCTGACGGCCA+GGG | + | chr2_3:45349625-45349644 | None:intergenic | 50.0% | |
| !! | GGAGAAGTTGGACTAGCATG+TGG | + | chr2_3:45349674-45349693 | None:intergenic | 50.0% |
| TCGAAGCCCATTTGCCTTCA+AGG | - | chr2_3:45349712-45349731 | Msa0293840:intron | 50.0% | |
| TGTTCTCCAGCTATTGCAGC+AGG | - | chr2_3:45349791-45349810 | Msa0293840:intron | 50.0% | |
| TCAAAGCCTGCTGCAATAGC+TGG | + | chr2_3:45349800-45349819 | None:intergenic | 50.0% | |
| TGAAGCCTTGGGAAGGAGAA+AGG | - | chr2_3:45349894-45349913 | Msa0293840:intron | 50.0% | |
| TGGATCCTTTCTCCTTCCCA+AGG | + | chr2_3:45349902-45349921 | None:intergenic | 50.0% | |
| ! | ATCACTTGCAGTGGACTCCT+AGG | + | chr2_3:45350259-45350278 | None:intergenic | 50.0% |
| AGGAGTCCACTGCAAGTGAT+CGG | - | chr2_3:45350259-45350278 | Msa0293840:intron | 50.0% | |
| ! | TACGTACCGATCACTTGCAG+TGG | + | chr2_3:45350268-45350287 | None:intergenic | 50.0% |
| ATGTTTAGTTAGGCGTGGCG+TGG | - | chr2_3:45350468-45350487 | Msa0293840:intron | 50.0% | |
| GACTCCTTTCCCCTAGGAAT+CGG | - | chr2_3:45350854-45350873 | Msa0293840:intron | 50.0% | |
| ACTCCTTTCCCCTAGGAATC+GGG | - | chr2_3:45350855-45350874 | Msa0293840:intron | 50.0% | |
| TAACCCGATTCCTAGGGGAA+AGG | + | chr2_3:45350861-45350880 | None:intergenic | 50.0% | |
| AGGTGCATTTCCCTCCCTAA+AGG | + | chr2_3:45351205-45351224 | None:intergenic | 50.0% | |
| ! | ACCCAACTTGTTTCGACCCA+GGG | + | chr2_3:45351432-45351451 | None:intergenic | 50.0% |
| TTGGAAAGGAAGACGAGCCG+GGG | + | chr2_3:45349325-45349344 | None:intergenic | 55.0% | |
| CTTGGAAAGGAAGACGAGCC+GGG | + | chr2_3:45349326-45349345 | None:intergenic | 55.0% | |
| GCAGCGTAAGGGGATGATGA+TGG | + | chr2_3:45349350-45349369 | None:intergenic | 55.0% | |
| !! | AGGTGTGACAGGAGCACTGA+TGG | + | chr2_3:45349483-45349502 | None:intergenic | 55.0% |
| TCTAGCAGTCGGAGAGCTCA+GGG | + | chr2_3:45349507-45349526 | None:intergenic | 55.0% | |
| TTCTAGCAGTCGGAGAGCTC+AGG | + | chr2_3:45349508-45349527 | None:intergenic | 55.0% | |
| GATGATCAATCTGCACGGCC+CGG | - | chr2_3:45349551-45349570 | Msa0293840:intron | 55.0% | |
| ATGATCAATCTGCACGGCCC+GGG | - | chr2_3:45349552-45349571 | Msa0293840:intron | 55.0% | |
| GGATCAACTATCTGACGGCC+AGG | + | chr2_3:45349626-45349645 | None:intergenic | 55.0% | |
| AACATGCCCCTGACTGTCCA+GGG | + | chr2_3:45349775-45349794 | None:intergenic | 55.0% | |
| GGGATTGTGAAGCCTTGGGA+AGG | - | chr2_3:45349887-45349906 | Msa0293840:intron | 55.0% | |
| ! | ACTTGCAGTGGACTCCTAGG+AGG | + | chr2_3:45350256-45350275 | None:intergenic | 55.0% |
| ACCAAGTGATTGGGCGCATG+AGG | - | chr2_3:45350724-45350743 | Msa0293840:intron | 55.0% | |
| ACCTCATGCGCCCAATCACT+TGG | + | chr2_3:45350728-45350747 | None:intergenic | 55.0% | |
| TGCTAGGACTCCTTTCCCCT+AGG | - | chr2_3:45350848-45350867 | Msa0293840:intron | 55.0% | |
| CACAGATGCGTCTGTTGCAG+CGG | - | chr2_3:45350990-45351009 | Msa0293840:CDS | 55.0% | |
| ACAGATGCGTCTGTTGCAGC+GGG | - | chr2_3:45350991-45351010 | Msa0293840:CDS | 55.0% | |
| GCCCTGGGTCGAAACAAGTT+GGG | - | chr2_3:45351428-45351447 | Msa0293840:CDS | 55.0% | |
| ! | GACCCAACTTGTTTCGACCC+AGG | + | chr2_3:45351433-45351452 | None:intergenic | 55.0% |
| TTGGAAAGGAAGACGAGCCG+GGG | + | chr2_3:45349325-45349344 | None:intergenic | 55.0% | |
| CTTGGAAAGGAAGACGAGCC+GGG | + | chr2_3:45349326-45349345 | None:intergenic | 55.0% | |
| GCAGCGTAAGGGGATGATGA+TGG | + | chr2_3:45349350-45349369 | None:intergenic | 55.0% | |
| !! | AGGTGTGACAGGAGCACTGA+TGG | + | chr2_3:45349483-45349502 | None:intergenic | 55.0% |
| TCTAGCAGTCGGAGAGCTCA+GGG | + | chr2_3:45349507-45349526 | None:intergenic | 55.0% | |
| TTCTAGCAGTCGGAGAGCTC+AGG | + | chr2_3:45349508-45349527 | None:intergenic | 55.0% | |
| GATGATCAATCTGCACGGCC+CGG | - | chr2_3:45349551-45349570 | Msa0293840:intron | 55.0% | |
| ATGATCAATCTGCACGGCCC+GGG | - | chr2_3:45349552-45349571 | Msa0293840:intron | 55.0% | |
| GGATCAACTATCTGACGGCC+AGG | + | chr2_3:45349626-45349645 | None:intergenic | 55.0% | |
| AACATGCCCCTGACTGTCCA+GGG | + | chr2_3:45349775-45349794 | None:intergenic | 55.0% | |
| GGGATTGTGAAGCCTTGGGA+AGG | - | chr2_3:45349887-45349906 | Msa0293840:intron | 55.0% | |
| ! | ACTTGCAGTGGACTCCTAGG+AGG | + | chr2_3:45350256-45350275 | None:intergenic | 55.0% |
| ACCAAGTGATTGGGCGCATG+AGG | - | chr2_3:45350724-45350743 | Msa0293840:intron | 55.0% | |
| ACCTCATGCGCCCAATCACT+TGG | + | chr2_3:45350728-45350747 | None:intergenic | 55.0% | |
| TGCTAGGACTCCTTTCCCCT+AGG | - | chr2_3:45350848-45350867 | Msa0293840:intron | 55.0% | |
| CACAGATGCGTCTGTTGCAG+CGG | - | chr2_3:45350990-45351009 | Msa0293840:CDS | 55.0% | |
| ACAGATGCGTCTGTTGCAGC+GGG | - | chr2_3:45350991-45351010 | Msa0293840:CDS | 55.0% | |
| GCCCTGGGTCGAAACAAGTT+GGG | - | chr2_3:45351428-45351447 | Msa0293840:CDS | 55.0% | |
| ! | GACCCAACTTGTTTCGACCC+AGG | + | chr2_3:45351433-45351452 | None:intergenic | 55.0% |
| CTAGCAGTCGGAGAGCTCAG+GGG | + | chr2_3:45349506-45349525 | None:intergenic | 60.0% | |
| AGGACCGGAAGAAGGCAGGA+AGG | + | chr2_3:45349597-45349616 | None:intergenic | 60.0% | |
| TTGGAGGACCGGAAGAAGGC+AGG | + | chr2_3:45349601-45349620 | None:intergenic | 60.0% | |
| ACTATCTGACGGCCAGGGCT+TGG | + | chr2_3:45349620-45349639 | None:intergenic | 60.0% | |
| ATGTGGACCCCTGGACAGTC+AGG | - | chr2_3:45349764-45349783 | Msa0293840:intron | 60.0% | |
| TGTGGACCCCTGGACAGTCA+GGG | - | chr2_3:45349765-45349784 | Msa0293840:intron | 60.0% | |
| ACATGCCCCTGACTGTCCAG+GGG | + | chr2_3:45349774-45349793 | None:intergenic | 60.0% | |
| GAACATGCCCCTGACTGTCC+AGG | + | chr2_3:45349776-45349795 | None:intergenic | 60.0% | |
| TTGTACTGCCAAGGAGGCCC+TGG | - | chr2_3:45351412-45351431 | Msa0293840:CDS | 60.0% | |
| TGTACTGCCAAGGAGGCCCT+GGG | - | chr2_3:45351413-45351432 | Msa0293840:CDS | 60.0% | |
| GGCCCTGGGTCGAAACAAGT+TGG | - | chr2_3:45351427-45351446 | Msa0293840:CDS | 60.0% | |
| CTAGCAGTCGGAGAGCTCAG+GGG | + | chr2_3:45349506-45349525 | None:intergenic | 60.0% | |
| AGGACCGGAAGAAGGCAGGA+AGG | + | chr2_3:45349597-45349616 | None:intergenic | 60.0% | |
| TTGGAGGACCGGAAGAAGGC+AGG | + | chr2_3:45349601-45349620 | None:intergenic | 60.0% | |
| ACTATCTGACGGCCAGGGCT+TGG | + | chr2_3:45349620-45349639 | None:intergenic | 60.0% | |
| ATGTGGACCCCTGGACAGTC+AGG | - | chr2_3:45349764-45349783 | Msa0293840:intron | 60.0% | |
| TGTGGACCCCTGGACAGTCA+GGG | - | chr2_3:45349765-45349784 | Msa0293840:intron | 60.0% | |
| ACATGCCCCTGACTGTCCAG+GGG | + | chr2_3:45349774-45349793 | None:intergenic | 60.0% | |
| GAACATGCCCCTGACTGTCC+AGG | + | chr2_3:45349776-45349795 | None:intergenic | 60.0% | |
| TTGTACTGCCAAGGAGGCCC+TGG | - | chr2_3:45351412-45351431 | Msa0293840:CDS | 60.0% | |
| TGTACTGCCAAGGAGGCCCT+GGG | - | chr2_3:45351413-45351432 | Msa0293840:CDS | 60.0% | |
| GGCCCTGGGTCGAAACAAGT+TGG | - | chr2_3:45351427-45351446 | Msa0293840:CDS | 60.0% | |
| AAGACGAGCCGGGGCTTGGA+TGG | + | chr2_3:45349316-45349335 | None:intergenic | 65.0% | |
| AAGGAAGACGAGCCGGGGCT+TGG | + | chr2_3:45349320-45349339 | None:intergenic | 65.0% | |
| ! | GAGCTCAGGGGAGGTGTGAC+AGG | + | chr2_3:45349494-45349513 | None:intergenic | 65.0% |
| ATCAATCTGCACGGCCCGGG+TGG | - | chr2_3:45349555-45349574 | Msa0293840:intron | 65.0% | |
| GGGCTTGGAGGACCGGAAGA+AGG | + | chr2_3:45349605-45349624 | None:intergenic | 65.0% | |
| TCTTCCGGTCCTCCAAGCCC+TGG | - | chr2_3:45349605-45349624 | Msa0293840:intron | 65.0% | |
| ATCTGACGGCCAGGGCTTGG+AGG | + | chr2_3:45349617-45349636 | None:intergenic | 65.0% | |
| GTGGACCCCTGGACAGTCAG+GGG | - | chr2_3:45349766-45349785 | Msa0293840:intron | 65.0% | |
| GTTTCGACCCAGGGCCTCCT+TGG | + | chr2_3:45351423-45351442 | None:intergenic | 65.0% | |
| AAGACGAGCCGGGGCTTGGA+TGG | + | chr2_3:45349316-45349335 | None:intergenic | 65.0% | |
| AAGGAAGACGAGCCGGGGCT+TGG | + | chr2_3:45349320-45349339 | None:intergenic | 65.0% | |
| ! | GAGCTCAGGGGAGGTGTGAC+AGG | + | chr2_3:45349494-45349513 | None:intergenic | 65.0% |
| ATCAATCTGCACGGCCCGGG+TGG | - | chr2_3:45349555-45349574 | Msa0293840:intron | 65.0% | |
| GGGCTTGGAGGACCGGAAGA+AGG | + | chr2_3:45349605-45349624 | None:intergenic | 65.0% | |
| TCTTCCGGTCCTCCAAGCCC+TGG | - | chr2_3:45349605-45349624 | Msa0293840:intron | 65.0% | |
| ATCTGACGGCCAGGGCTTGG+AGG | + | chr2_3:45349617-45349636 | None:intergenic | 65.0% | |
| GTGGACCCCTGGACAGTCAG+GGG | - | chr2_3:45349766-45349785 | Msa0293840:intron | 65.0% | |
| GTTTCGACCCAGGGCCTCCT+TGG | + | chr2_3:45351423-45351442 | None:intergenic | 65.0% | |
| GCAGTCGGAGAGCTCAGGGG+AGG | + | chr2_3:45349503-45349522 | None:intergenic | 70.0% | |
| ACGGCCAGGGCTTGGAGGAC+CGG | + | chr2_3:45349612-45349631 | None:intergenic | 70.0% | |
| CAGGCAGCGGTTCGCGCATG+TGG | - | chr2_3:45349747-45349766 | Msa0293840:intron | 70.0% | |
| GGTTCGCGCATGTGGACCCC+TGG | - | chr2_3:45349755-45349774 | Msa0293840:intron | 70.0% | |
| GCAGTCGGAGAGCTCAGGGG+AGG | + | chr2_3:45349503-45349522 | None:intergenic | 70.0% | |
| ACGGCCAGGGCTTGGAGGAC+CGG | + | chr2_3:45349612-45349631 | None:intergenic | 70.0% | |
| CAGGCAGCGGTTCGCGCATG+TGG | - | chr2_3:45349747-45349766 | Msa0293840:intron | 70.0% | |
| GGTTCGCGCATGTGGACCCC+TGG | - | chr2_3:45349755-45349774 | Msa0293840:intron | 70.0% | |
| TCTGCACGGCCCGGGTGGAC+TGG | - | chr2_3:45349560-45349579 | Msa0293840:intron | 75.0% | |
| TCTGCACGGCCCGGGTGGAC+TGG | - | chr2_3:45349560-45349579 | Msa0293840:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 45349266 | 45351553 | 45349266 | ID=Msa0293840;Name=Msa0293840 |
| chr2_3 | mRNA | 45349266 | 45351553 | 45349266 | ID=Msa0293840-mRNA-1;Parent=Msa0293840;Name=Msa0293840-mRNA-1;_AED=0.42;_eAED=0.42;_QI=0|0|0|0.5|1|1|2|0|223 |
| chr2_3 | exon | 45350888 | 45351553 | 45350888 | ID=Msa0293840-mRNA-1:exon:14175;Parent=Msa0293840-mRNA-1 |
| chr2_3 | exon | 45349266 | 45349271 | 45349266 | ID=Msa0293840-mRNA-1:exon:14174;Parent=Msa0293840-mRNA-1 |
| chr2_3 | CDS | 45350888 | 45351553 | 45350888 | ID=Msa0293840-mRNA-1:cds;Parent=Msa0293840-mRNA-1 |
| chr2_3 | CDS | 45349266 | 45349271 | 45349266 | ID=Msa0293840-mRNA-1:cds;Parent=Msa0293840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
