AlfalfaGEDB | Msa0069350

M. sativa cultivar zhongmu-4 / Msa0069350

KEGG: K01057
GO: GO:0002229 GO:0002239 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005777 GO:0005829 GO:0006081 GO:0006082 GO:0006098 GO:0006139 GO:0006725 GO:0006732 GO:0006733 GO:0006739 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009051 GO:0009117 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0016020 GO:0016787 GO:0016788 GO:0017057 GO:0019362 GO:0019637 GO:0019682 GO:0019693 GO:0031090 GO:0034641 GO:0042126 GO:0042128 GO:0042579 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046496 GO:0050896 GO:0051156 GO:0051186 GO:0051704 GO:0051707 GO:0051775 GO:0052689 GO:0055086 GO:0071461 GO:0071704 GO:0071941 GO:0072524 GO:0098542 GO:0098588 GO:0098805 GO:1901135 GO:1901360 GO:1901564 GO:2001057
PFAM: PF01182.23

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0069350	XP_013466360.1	97.484	318	8	0	1	318	1	318	0.0	637

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0069350	sp\|Q69NG5\|6PGL4_ORYSJ	61.983	242	89	3	78	316	80	321	2.23e-100	301

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0069350	A0A072VFQ2	97.484	318	8	0	1	318	1	318	0.0	637

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0005390	Msa0069350	0.807662	4.530859e-50	-8.615850e-47
Msa0009780	Msa0069350	0.845506	3.892483e-59	-8.615850e-47
Msa0015150	Msa0069350	0.806418	8.307312e-50	-8.615850e-47
Msa0053850	Msa0069350	0.818723	1.689322e-52	-8.615850e-47
Msa0069350	Msa0104570	0.852470	4.521752e-61	-8.615850e-47
Msa0069350	Msa0150590	0.859812	3.191694e-63	-8.615850e-47
Msa0069350	Msa0155180	0.854746	1.002630e-61	-8.615850e-47
Msa0069350	Msa0179670	0.807506	4.889123e-50	-8.615850e-47
Msa0069350	Msa0214210	0.812512	4.084980e-51	-8.615850e-47
Msa0069350	Msa0254540	0.805484	1.305312e-49	-8.615850e-47
Msa0069350	Msa0274650	0.800578	1.349307e-48	-8.615850e-47
Msa0069350	Msa0293840	0.805732	1.157836e-49	-8.615850e-47
Msa0069350	Msa0332280	0.827472	1.535632e-54	-8.615850e-47
Msa0069350	Msa0420430	0.815576	8.613095e-52	-8.615850e-47
Msa0069350	Msa0420680	0.836699	8.030040e-57	-8.615850e-47
Msa0069350	Msa0427820	0.830616	2.656176e-55	-8.615850e-47
Msa0069350	Msa0474060	0.823198	1.576071e-53	-8.615850e-47
Msa0069350	Msa0498610	0.815266	1.009355e-51	-8.615850e-47
Msa0069350	Msa0512520	0.819334	1.226624e-52	-8.615850e-47
Msa0069350	Msa0518680	0.835817	1.345758e-56	-8.615850e-47
Msa0069350	Msa0541740	0.807338	5.307334e-50	-8.615850e-47
Msa0069350	Msa0557850	0.840274	9.595999e-58	-8.615850e-47
Msa0069350	Msa0564980	0.817906	2.586493e-52	-8.615850e-47
Msa0069350	Msa0575710	0.843994	9.945679e-59	-8.615850e-47
Msa0069350	Msa0612520	0.804236	2.379871e-49	-8.615850e-47
Msa0069350	Msa0653160	0.839056	1.990249e-57	-8.615850e-47
Msa0069350	Msa0655710	0.803182	3.938354e-49	-8.615850e-47
Msa0069350	Msa0688620	0.813930	1.994255e-51	-8.615850e-47
Msa0069350	Msa0695560	0.827944	1.182457e-54	-8.615850e-47
Msa0069350	Msa0701250	0.804206	2.414911e-49	-8.615850e-47
Msa0069350	Msa0741970	0.804215	2.404417e-49	-8.615850e-47
Msa0069350	Msa0749190	0.811694	6.157761e-51	-8.615850e-47
Msa0069350	Msa0750520	0.814948	1.187732e-51	-8.615850e-47
Msa0069350	Msa0862170	0.806963	6.372226e-50	-8.615850e-47
Msa0069350	Msa0965470	0.811318	7.434699e-51	-8.615850e-47
Msa0069350	Msa1033420	0.805799	1.121161e-49	-8.615850e-47
Msa0069350	Msa1034960	0.800154	1.646065e-48	-8.615850e-47
Msa0069350	Msa1060340	0.814068	1.859292e-51	-8.615850e-47
Msa0069350	Msa1071410	0.810896	9.176333e-51	-8.615850e-47
Msa0069350	Msa1073060	0.817710	2.863798e-52	-8.615850e-47
Msa0069350	Msa1130780	0.802141	6.458326e-49	-8.615850e-47
Msa0069350	Msa1131150	0.829202	5.873648e-55	-8.615850e-47
Msa0069350	Msa1144990	0.805856	1.090647e-49	-8.615850e-47
Msa0069350	Msa1160780	0.838337	3.053798e-57	-8.615850e-47
Msa0069350	Msa1209320	0.804120	2.516021e-49	-8.615850e-47
Msa0069350	Msa1209720	0.800199	1.612238e-48	-8.615850e-47
Msa0069350	Msa1267930	0.804312	2.295324e-49	-8.615850e-47
Msa0069350	Msa1322600	0.804484	2.112645e-49	-8.615850e-47
Msa0069350	Msa1341750	0.811433	7.018225e-51	-8.615850e-47
Msa0069350	Msa1356220	0.822078	2.871270e-53	-8.615850e-47
Msa0069350	Msa1381800	0.817118	3.891507e-52	-8.615850e-47
Msa0069350	Msa1417930	0.815277	1.003895e-51	-8.615850e-47
Msa0069350	Msa1465040	0.826500	2.622274e-54	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0069350	MtrunA17_Chr1g0158821	97.484	318	8	0	1	318	1	318	0.0	637
Msa0069350	MtrunA17_Chr1g0158811	63.467	323	109	6	1	318	1	319	1.15e-137	392
Msa0069350	MtrunA17_Chr3g0127471	59.406	303	116	4	19	316	9	309	4.04e-120	347
Msa0069350	MtrunA17_Chr5g0419391	48.347	242	122	3	78	316	18	259	7.76e-78	238

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0069350	AT5G24400.1	50.654	306	139	4	13	316	30	325	1.04e-100	299
Msa0069350	AT3G49360.1	51.867	241	108	3	81	316	14	251	9.01e-82	248
Msa0069350	AT1G13700.2	48.361	244	121	3	80	318	20	263	1.29e-79	243
Msa0069350	AT1G13700.3	48.361	244	121	3	80	318	20	263	1.29e-79	243
Msa0069350	AT1G13700.1	48.361	244	121	3	80	318	20	263	1.29e-79	243
Msa0069350	AT5G24420.1	48.819	254	123	3	68	316	1	252	1.26e-77	238
Msa0069350	AT5G24410.1	50.000	244	114	3	78	316	17	257	4.86e-76	234

Find 86 sgRNAs with CRISPR-Local

Find 272 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGATCTTATGCTATTAGATA+TGG	0.219132	1_2:-37643465	Msa0069350:CDS
AATAGCATAAGATCAAATTT+TGG	0.228100	1_2:+37643473	None:intergenic
TGCTTGTGACCAAACGTCTT+AGG	0.231392	1_2:+37643528	None:intergenic
CATGTAGCTTCTTTGTTTCC+AGG	0.258573	1_2:-37643431	Msa0069350:CDS
GGAGAGGTCAGCAACATATT+TGG	0.269169	1_2:+37644584	None:intergenic
TTTATTGAGCAAAATAAGTA+TGG	0.285866	1_2:-37642737	Msa0069350:three_prime_UTR
GGAGCATCTTGCTGTGTCTT+TGG	0.286314	1_2:-37644607	Msa0069350:CDS
CCACCAACATGAATTCTCTT+AGG	0.287083	1_2:+37644681	None:intergenic
AGCAGCAATTGAAATATATA+AGG	0.290973	1_2:+37642941	None:intergenic
TTGCTATCAACGTGAGTCTT+TGG	0.304718	1_2:+37643889	None:intergenic
ATCCTCTCCGGCGGCGGTTT+AGG	0.307239	1_2:+37643356	None:intergenic
CACTGAATGAGACTGATAAA+TGG	0.310242	1_2:-37643400	Msa0069350:CDS
TGGACAAGGGTGCTGCTTCA+AGG	0.364070	1_2:-37643172	Msa0069350:CDS
GAAGATACATTGTGTCTTAG+AGG	0.365315	1_2:+37644711	None:intergenic
GTCATTGGTGTCACCTCAAT+TGG	0.367130	1_2:-37644754	Msa0069350:CDS
CTGGACCCGTCAAGTATCTA+AGG	0.376988	1_2:-37644515	Msa0069350:intron
ATAGGAAGCTTATTATCATT+AGG	0.380697	1_2:+37643233	None:intergenic
AACCATTTGATATCTCCTTC+AGG	0.389182	1_2:+37643197	None:intergenic
AGGAGATATCAAATGGTTCT+TGG	0.390569	1_2:-37643192	Msa0069350:CDS
GATCTTATGCTATTAGATAT+GGG	0.400581	1_2:-37643464	Msa0069350:CDS
GTGCTGCTTCAAGGCTCTAT+AGG	0.417306	1_2:-37643163	Msa0069350:CDS
GCTTGTGACCAAACGTCTTA+GGG	0.422653	1_2:+37643529	None:intergenic
TGAGACAACCCTAAGACGTT+TGG	0.427530	1_2:-37643537	Msa0069350:CDS
TTGTGTTTGTGACTTATGTT+TGG	0.433948	1_2:+37644788	None:intergenic
AAGAAAATAAAGCAATATGA+TGG	0.435650	1_2:-37642917	Msa0069350:three_prime_UTR
AATTCACAATTTCAGGAAGC+TGG	0.444188	1_2:-37643983	Msa0069350:intron
GTTTACTCTGCACTTGAGAA+AGG	0.447789	1_2:-37643257	Msa0069350:CDS
CAATCGATAGTGTCACAATA+TGG	0.447946	1_2:+37643952	None:intergenic
CATTGTTTCTAACTAATCAA+TGG	0.455253	1_2:-37644862	Msa0069350:exon
CTTAGATACTTGACGGGTCC+AGG	0.470356	1_2:+37644516	None:intergenic
AATGTAATCCTCTCCGGCGG+CGG	0.473734	1_2:+37643350	None:intergenic
ACAATCCTCAACCATGTCAT+TGG	0.477837	1_2:-37644769	Msa0069350:CDS
TTGGAATGCAACATGCTTTG+TGG	0.479757	1_2:+37644807	None:intergenic
TGCTGCTCCATCAGCTGGTA+GGG	0.490513	1_2:+37643568	None:intergenic
TTATCAGTCTCATTCAGTGC+AGG	0.493377	1_2:+37643404	None:intergenic
ATGTAGCTTCTTTGTTTCCA+GGG	0.494234	1_2:-37643430	Msa0069350:CDS
AAAGAAGCTACATGTCCATC+AGG	0.494933	1_2:+37643440	None:intergenic
CCTAAGAGAATTCATGTTGG+TGG	0.500842	1_2:-37644681	Msa0069350:CDS
TGCTACTTCAAATATTGCAA+TGG	0.501756	1_2:-37643309	Msa0069350:CDS
GCAATGGTTGTGACTGGTGC+TGG	0.501892	1_2:-37643293	Msa0069350:CDS
TCATTCAGTGCAGGGTACCC+TGG	0.512835	1_2:+37643413	None:intergenic
ACATCTGCTGCTCCATCAGC+TGG	0.514811	1_2:+37643563	None:intergenic
ACTGAATGAGACTGATAAAT+GGG	0.516875	1_2:-37643399	Msa0069350:CDS
TCAATTGTGTTCACATTGAG+TGG	0.517319	1_2:+37643596	None:intergenic
AAGCAATATGATGGGACTGC+TGG	0.518393	1_2:-37642908	Msa0069350:three_prime_UTR
TAATAAGCTTCCTATTCAAA+AGG	0.521966	1_2:-37643225	Msa0069350:CDS
GAGAATTCATGTTGGTGGCT+TGG	0.523036	1_2:-37644676	Msa0069350:CDS
CTGCTGCTCCATCAGCTGGT+AGG	0.523186	1_2:+37643567	None:intergenic
TCATTGGTGTCACCTCAATT+GGG	0.523821	1_2:-37644753	Msa0069350:CDS
CGTTAGAATGAATGTTGCTC+GGG	0.526852	1_2:+37643116	None:intergenic
ACAATACCTTAGATACTTGA+CGG	0.530977	1_2:+37644509	None:intergenic
TTTGAAGTAGCATTAATCAC+TGG	0.530984	1_2:+37643320	None:intergenic
CTATTAGATATGGGACCTGA+TGG	0.532418	1_2:-37643455	Msa0069350:CDS
CAATTGTGTTCACATTGAGT+GGG	0.534779	1_2:+37643597	None:intergenic
ATCCTGAAGGAGATATCAAA+TGG	0.537202	1_2:-37643199	Msa0069350:CDS
TATCAAATGGTTCTTGGACA+AGG	0.539582	1_2:-37643186	Msa0069350:CDS
TGCTTTGTGGAGTGCATGAA+AGG	0.540553	1_2:+37644820	None:intergenic
AGAAAATAAAGCAATATGAT+GGG	0.544826	1_2:-37642916	Msa0069350:three_prime_UTR
GATGATTCCCTACCAGCTGA+TGG	0.545667	1_2:-37643575	Msa0069350:CDS
ATGGATCGTATATATAGTGT+TGG	0.550526	1_2:+37643046	None:intergenic
ACGTTAGAATGAATGTTGCT+CGG	0.555026	1_2:+37643115	None:intergenic
TCATGTTGGTGGCTTGGTGA+AGG	0.564204	1_2:-37644670	Msa0069350:CDS
AATGTAAATGTAATCCTCTC+CGG	0.571855	1_2:+37643344	None:intergenic
TATCAGTCTCATTCAGTGCA+GGG	0.572605	1_2:+37643405	None:intergenic
TAATGATAGCTTTATCTCCA+AGG	0.574013	1_2:-37643854	Msa0069350:intron
CAATACCTTAGATACTTGAC+GGG	0.575298	1_2:+37644510	None:intergenic
ATCAAATGGTTCTTGGACAA+GGG	0.578434	1_2:-37643185	Msa0069350:CDS
TGTGTCTTAGAGGGCTATAG+AGG	0.581993	1_2:+37644721	None:intergenic
ATTCAAAAGGTGAATCCTGA+AGG	0.582947	1_2:-37643212	Msa0069350:CDS
CACCTAAACCGCCGCCGGAG+AGG	0.588803	1_2:-37643358	Msa0069350:CDS
AAGATACATTGTGTCTTAGA+GGG	0.590300	1_2:+37644712	None:intergenic
TGACACCAATGACATGGTTG+AGG	0.595503	1_2:+37644764	None:intergenic
CATATTGTGACACTATCGAT+TGG	0.601292	1_2:-37643951	Msa0069350:CDS
AATATTGCAATGGTTGTGAC+TGG	0.601336	1_2:-37643299	Msa0069350:CDS
ACACTATCGATTGGTCTAAG+TGG	0.610653	1_2:-37643942	Msa0069350:CDS
AATTGTGTTCACATTGAGTG+GGG	0.620392	1_2:+37643598	None:intergenic
AAACCTAAGAGAATTCATGT+TGG	0.624267	1_2:-37644684	Msa0069350:CDS
GAATGCACCTAAACCGCCGC+CGG	0.626616	1_2:-37643363	Msa0069350:CDS
GGATGTGCATGTGCTAAGCA+AGG	0.627699	1_2:-37644628	Msa0069350:CDS
TTATCGAGTGAAATTCATGC+AGG	0.629948	1_2:+37643007	None:intergenic
GCTTTGTGGAGTGCATGAAA+GGG	0.631225	1_2:+37644821	None:intergenic
ATTGTGTTCACATTGAGTGG+GGG	0.652455	1_2:+37643599	None:intergenic
TCGATAGTGTCACAATATGG+TGG	0.659952	1_2:+37643955	None:intergenic
GTAAATGTAATCCTCTCCGG+CGG	0.716736	1_2:+37643347	None:intergenic
GGCATCAATGAATAACAACA+AGG	0.718422	1_2:-37644649	Msa0069350:CDS
TTGAGGTGACACCAATGACA+TGG	0.719081	1_2:+37644758	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTCTTAAATGAAAAATAAAA+TGG	-	chr1_2:37643493-37643512	Msa0069350:CDS	10.0%
!!	TTCTTAAATGAAAAATAAAA+TGG	-	chr1_2:37643493-37643512	Msa0069350:CDS	10.0%
!!	TTAAATGAAAAATAAAATGG+TGG	-	chr1_2:37643496-37643515	Msa0069350:CDS	15.0%
!!	ATGAAGATAAGTTAATTATT+TGG	-	chr1_2:37643549-37643568	Msa0069350:CDS	15.0%
!!	TGAAGATAAGTTAATTATTT+GGG	-	chr1_2:37643550-37643569	Msa0069350:CDS	15.0%
!!!	TTTTTCTTTTTGAATGTAAA+TGG	-	chr1_2:37644786-37644805	Msa0069350:CDS	15.0%
!!	TTAAATGAAAAATAAAATGG+TGG	-	chr1_2:37643496-37643515	Msa0069350:CDS	15.0%
!!	ATGAAGATAAGTTAATTATT+TGG	-	chr1_2:37643549-37643568	Msa0069350:CDS	15.0%
!!	TGAAGATAAGTTAATTATTT+GGG	-	chr1_2:37643550-37643569	Msa0069350:CDS	15.0%
!!!	TTTTTCTTTTTGAATGTAAA+TGG	-	chr1_2:37644786-37644805	Msa0069350:CDS	15.0%
!!!	TCATCTTACTCTTTAAAAAA+TGG	-	chr1_2:37643109-37643128	Msa0069350:three_prime_UTR	20.0%
!!	TTATATCGTCAAATAAATGA+TGG	+	chr1_2:37643863-37643882	None:intergenic	20.0%
!!!	ATAGCATAAGATCAAATTTT+GGG	+	chr1_2:37644107-37644126	None:intergenic	20.0%
!!!	AATAGCATAAGATCAAATTT+TGG	+	chr1_2:37644108-37644127	None:intergenic	20.0%
!!	AAGAAAATAAAGCAATATGA+TGG	-	chr1_2:37644661-37644680	Msa0069350:CDS	20.0%
!!	AGAAAATAAAGCAATATGAT+GGG	-	chr1_2:37644662-37644681	Msa0069350:CDS	20.0%
!!!	AATAAAAACACACACATTTT+AGG	+	chr1_2:37644827-37644846	None:intergenic	20.0%
!!	TTTATTGAGCAAAATAAGTA+TGG	-	chr1_2:37644841-37644860	Msa0069350:CDS	20.0%
!!!	TCATCTTACTCTTTAAAAAA+TGG	-	chr1_2:37643109-37643128	Msa0069350:three_prime_UTR	20.0%
!!	TTATATCGTCAAATAAATGA+TGG	+	chr1_2:37643863-37643882	None:intergenic	20.0%
!!!	ATAGCATAAGATCAAATTTT+GGG	+	chr1_2:37644107-37644126	None:intergenic	20.0%
!!!	AATAGCATAAGATCAAATTT+TGG	+	chr1_2:37644108-37644127	None:intergenic	20.0%
!!	AAGAAAATAAAGCAATATGA+TGG	-	chr1_2:37644661-37644680	Msa0069350:CDS	20.0%
!!	AGAAAATAAAGCAATATGAT+GGG	-	chr1_2:37644662-37644681	Msa0069350:CDS	20.0%
!!!	AATAAAAACACACACATTTT+AGG	+	chr1_2:37644827-37644846	None:intergenic	20.0%
!!	TTTATTGAGCAAAATAAGTA+TGG	-	chr1_2:37644841-37644860	Msa0069350:CDS	20.0%
!!!	CATTGTTTCTAACTAATCAA+TGG	-	chr1_2:37642716-37642735	Msa0069350:three_prime_UTR	25.0%
!!	CTTCTCTCTAATGTATTTTT+CGG	+	chr1_2:37643018-37643037	None:intergenic	25.0%
!	GAAAAATACATTAGAGAGAA+GGG	-	chr1_2:37643017-37643036	Msa0069350:three_prime_UTR	25.0%
!	AAAAATACATTAGAGAGAAG+GGG	-	chr1_2:37643018-37643037	Msa0069350:three_prime_UTR	25.0%
!	TGTCATTAATGACAAGTAAA+TGG	-	chr1_2:37643160-37643179	Msa0069350:CDS	25.0%
!	ATTCTTGAATTCACAATTTC+AGG	-	chr1_2:37643588-37643607	Msa0069350:CDS	25.0%
!!!	AAATTTTGGGAAGTTAGTTA+GGG	+	chr1_2:37644094-37644113	None:intergenic	25.0%
!	TGATCTTATGCTATTAGATA+TGG	-	chr1_2:37644113-37644132	Msa0069350:intron	25.0%
!	GATCTTATGCTATTAGATAT+GGG	-	chr1_2:37644114-37644133	Msa0069350:intron	25.0%
!	ATAGGAAGCTTATTATCATT+AGG	+	chr1_2:37644348-37644367	None:intergenic	25.0%
!	TAATAAGCTTCCTATTCAAA+AGG	-	chr1_2:37644353-37644372	Msa0069350:intron	25.0%
!!!	TATACGATCCATTTTTAAGA+TGG	-	chr1_2:37644543-37644562	Msa0069350:CDS	25.0%
!	AGCAGCAATTGAAATATATA+AGG	+	chr1_2:37644640-37644659	None:intergenic	25.0%
!!!	CATTGTTTCTAACTAATCAA+TGG	-	chr1_2:37642716-37642735	Msa0069350:three_prime_UTR	25.0%
!!	CTTCTCTCTAATGTATTTTT+CGG	+	chr1_2:37643018-37643037	None:intergenic	25.0%
!	GAAAAATACATTAGAGAGAA+GGG	-	chr1_2:37643017-37643036	Msa0069350:three_prime_UTR	25.0%
!	AAAAATACATTAGAGAGAAG+GGG	-	chr1_2:37643018-37643037	Msa0069350:three_prime_UTR	25.0%
!	TGTCATTAATGACAAGTAAA+TGG	-	chr1_2:37643160-37643179	Msa0069350:CDS	25.0%
!	ATTCTTGAATTCACAATTTC+AGG	-	chr1_2:37643588-37643607	Msa0069350:CDS	25.0%
!!!	AAATTTTGGGAAGTTAGTTA+GGG	+	chr1_2:37644094-37644113	None:intergenic	25.0%
!	TGATCTTATGCTATTAGATA+TGG	-	chr1_2:37644113-37644132	Msa0069350:intron	25.0%
!	GATCTTATGCTATTAGATAT+GGG	-	chr1_2:37644114-37644133	Msa0069350:intron	25.0%
!	ATAGGAAGCTTATTATCATT+AGG	+	chr1_2:37644348-37644367	None:intergenic	25.0%
!	TAATAAGCTTCCTATTCAAA+AGG	-	chr1_2:37644353-37644372	Msa0069350:intron	25.0%
!!!	TATACGATCCATTTTTAAGA+TGG	-	chr1_2:37644543-37644562	Msa0069350:CDS	25.0%
!	AGCAGCAATTGAAATATATA+AGG	+	chr1_2:37644640-37644659	None:intergenic	25.0%
	TTGTGTTTGTGACTTATGTT+TGG	+	chr1_2:37642793-37642812	None:intergenic	30.0%
	AAGATACATTGTGTCTTAGA+GGG	+	chr1_2:37642869-37642888	None:intergenic	30.0%
	AAACCTAAGAGAATTCATGT+TGG	-	chr1_2:37642894-37642913	Msa0069350:three_prime_UTR	30.0%
	CGAAAAATACATTAGAGAGA+AGG	-	chr1_2:37643016-37643035	Msa0069350:three_prime_UTR	30.0%
	ACAATACCTTAGATACTTGA+CGG	+	chr1_2:37643072-37643091	None:intergenic	30.0%
	AGTCAAAAATATACGTCTGA+AGG	+	chr1_2:37643355-37643374	None:intergenic	30.0%
!!!	AGTCGAGATTTTTAGCTATT+TGG	-	chr1_2:37643434-37643453	Msa0069350:CDS	30.0%
	ATTTATTGCCAATTTCGCTA+GGG	+	chr1_2:37643460-37643479	None:intergenic	30.0%
	TATTTATTGCCAATTTCGCT+AGG	+	chr1_2:37643461-37643480	None:intergenic	30.0%
!!	TAATGATAGCTTTATCTCCA+AGG	-	chr1_2:37643724-37643743	Msa0069350:intron	30.0%
!	TCATATTTTATCGTGTACCT+TGG	+	chr1_2:37643744-37643763	None:intergenic	30.0%
!	AATAAATGATGGTTTGTGAC+TGG	+	chr1_2:37643852-37643871	None:intergenic	30.0%
	CTAAGTCACATTGTTGTATT+TGG	-	chr1_2:37643944-37643963	Msa0069350:CDS	30.0%
!!	CAAATTTTGGGAAGTTAGTT+AGG	+	chr1_2:37644095-37644114	None:intergenic	30.0%
	ACTGAATGAGACTGATAAAT+GGG	-	chr1_2:37644179-37644198	Msa0069350:intron	30.0%
	AATGTAAATGTAATCCTCTC+CGG	+	chr1_2:37644237-37644256	None:intergenic	30.0%
!	TTTGAAGTAGCATTAATCAC+TGG	+	chr1_2:37644261-37644280	None:intergenic	30.0%
!	TGCTACTTCAAATATTGCAA+TGG	-	chr1_2:37644269-37644288	Msa0069350:intron	30.0%
	ATGGATCGTATATATAGTGT+TGG	+	chr1_2:37644535-37644554	None:intergenic	30.0%
!	CTATGCTTCTTTTATTGTCT+TGG	+	chr1_2:37644751-37644770	None:intergenic	30.0%
	TTGTGTTTGTGACTTATGTT+TGG	+	chr1_2:37642793-37642812	None:intergenic	30.0%
	AAGATACATTGTGTCTTAGA+GGG	+	chr1_2:37642869-37642888	None:intergenic	30.0%
	AAACCTAAGAGAATTCATGT+TGG	-	chr1_2:37642894-37642913	Msa0069350:three_prime_UTR	30.0%
	CGAAAAATACATTAGAGAGA+AGG	-	chr1_2:37643016-37643035	Msa0069350:three_prime_UTR	30.0%
	ACAATACCTTAGATACTTGA+CGG	+	chr1_2:37643072-37643091	None:intergenic	30.0%
	AGTCAAAAATATACGTCTGA+AGG	+	chr1_2:37643355-37643374	None:intergenic	30.0%
!!!	AGTCGAGATTTTTAGCTATT+TGG	-	chr1_2:37643434-37643453	Msa0069350:CDS	30.0%
	ATTTATTGCCAATTTCGCTA+GGG	+	chr1_2:37643460-37643479	None:intergenic	30.0%
	TATTTATTGCCAATTTCGCT+AGG	+	chr1_2:37643461-37643480	None:intergenic	30.0%
!!	TAATGATAGCTTTATCTCCA+AGG	-	chr1_2:37643724-37643743	Msa0069350:intron	30.0%
!	TCATATTTTATCGTGTACCT+TGG	+	chr1_2:37643744-37643763	None:intergenic	30.0%
!	AATAAATGATGGTTTGTGAC+TGG	+	chr1_2:37643852-37643871	None:intergenic	30.0%
	CTAAGTCACATTGTTGTATT+TGG	-	chr1_2:37643944-37643963	Msa0069350:CDS	30.0%
!!	CAAATTTTGGGAAGTTAGTT+AGG	+	chr1_2:37644095-37644114	None:intergenic	30.0%
	ACTGAATGAGACTGATAAAT+GGG	-	chr1_2:37644179-37644198	Msa0069350:intron	30.0%
	AATGTAAATGTAATCCTCTC+CGG	+	chr1_2:37644237-37644256	None:intergenic	30.0%
!	TTTGAAGTAGCATTAATCAC+TGG	+	chr1_2:37644261-37644280	None:intergenic	30.0%
!	TGCTACTTCAAATATTGCAA+TGG	-	chr1_2:37644269-37644288	Msa0069350:intron	30.0%
	ATGGATCGTATATATAGTGT+TGG	+	chr1_2:37644535-37644554	None:intergenic	30.0%
!	CTATGCTTCTTTTATTGTCT+TGG	+	chr1_2:37644751-37644770	None:intergenic	30.0%
	GAAGATACATTGTGTCTTAG+AGG	+	chr1_2:37642870-37642889	None:intergenic	35.0%
	GGCATCAATGAATAACAACA+AGG	-	chr1_2:37642929-37642948	Msa0069350:three_prime_UTR	35.0%
!!	CTCTAATGTATTTTTCGGAG+AGG	+	chr1_2:37643013-37643032	None:intergenic	35.0%
	CAATACCTTAGATACTTGAC+GGG	+	chr1_2:37643071-37643090	None:intergenic	35.0%
	TAGTAGAGTTGAAATCTCCT+CGG	+	chr1_2:37643192-37643211	None:intergenic	35.0%
!	AGTTCAAGAGTACGATGATA+GGG	+	chr1_2:37643261-37643280	None:intergenic	35.0%
!	TACTGTTTCTCATGATCACA+TGG	+	chr1_2:37643294-37643313	None:intergenic	35.0%
	TGTGATCATGAGAAACAGTA+AGG	-	chr1_2:37643294-37643313	Msa0069350:CDS	35.0%
	AACAGTAAGGACCTAGTTAA+TGG	-	chr1_2:37643307-37643326	Msa0069350:CDS	35.0%
	AATTCACAATTTCAGGAAGC+TGG	-	chr1_2:37643595-37643614	Msa0069350:CDS	35.0%
	CAATCGATAGTGTCACAATA+TGG	+	chr1_2:37643629-37643648	None:intergenic	35.0%
	CATATTGTGACACTATCGAT+TGG	-	chr1_2:37643627-37643646	Msa0069350:intron	35.0%
!	GTCTAAGTGGCACATATTTT+TGG	-	chr1_2:37643649-37643668	Msa0069350:intron	35.0%
!!!	TAAGTGGCACATATTTTTGG+TGG	-	chr1_2:37643652-37643671	Msa0069350:intron	35.0%
	GTCACATTGTTGTATTTGGA+AGG	-	chr1_2:37643948-37643967	Msa0069350:CDS	35.0%
	AATTGTGTTCACATTGAGTG+GGG	+	chr1_2:37643983-37644002	None:intergenic	35.0%
	CAATTGTGTTCACATTGAGT+GGG	+	chr1_2:37643984-37644003	None:intergenic	35.0%
	TCAATTGTGTTCACATTGAG+TGG	+	chr1_2:37643985-37644004	None:intergenic	35.0%
!	ATGTAGCTTCTTTGTTTCCA+GGG	-	chr1_2:37644148-37644167	Msa0069350:intron	35.0%
	CACTGAATGAGACTGATAAA+TGG	-	chr1_2:37644178-37644197	Msa0069350:intron	35.0%
	AATATTGCAATGGTTGTGAC+TGG	-	chr1_2:37644279-37644298	Msa0069350:intron	35.0%
!	TCAGGATTCACCTTTTGAAT+AGG	+	chr1_2:37644366-37644385	None:intergenic	35.0%
	ATTCAAAAGGTGAATCCTGA+AGG	-	chr1_2:37644366-37644385	Msa0069350:intron	35.0%
	ATCCTGAAGGAGATATCAAA+TGG	-	chr1_2:37644379-37644398	Msa0069350:intron	35.0%
	AACCATTTGATATCTCCTTC+AGG	+	chr1_2:37644384-37644403	None:intergenic	35.0%
	AGGAGATATCAAATGGTTCT+TGG	-	chr1_2:37644386-37644405	Msa0069350:intron	35.0%
	TATCAAATGGTTCTTGGACA+AGG	-	chr1_2:37644392-37644411	Msa0069350:intron	35.0%
	ATCAAATGGTTCTTGGACAA+GGG	-	chr1_2:37644393-37644412	Msa0069350:intron	35.0%
	ACGTTAGAATGAATGTTGCT+CGG	+	chr1_2:37644466-37644485	None:intergenic	35.0%
!!!	ACGATCCATTTTTAAGATGG+TGG	-	chr1_2:37644546-37644565	Msa0069350:CDS	35.0%
!!!	CGATCCATTTTTAAGATGGT+GGG	-	chr1_2:37644547-37644566	Msa0069350:CDS	35.0%
	TTATCGAGTGAAATTCATGC+AGG	+	chr1_2:37644574-37644593	None:intergenic	35.0%
	GAAGATACATTGTGTCTTAG+AGG	+	chr1_2:37642870-37642889	None:intergenic	35.0%
	GGCATCAATGAATAACAACA+AGG	-	chr1_2:37642929-37642948	Msa0069350:three_prime_UTR	35.0%
!!	CTCTAATGTATTTTTCGGAG+AGG	+	chr1_2:37643013-37643032	None:intergenic	35.0%
	CAATACCTTAGATACTTGAC+GGG	+	chr1_2:37643071-37643090	None:intergenic	35.0%
	TAGTAGAGTTGAAATCTCCT+CGG	+	chr1_2:37643192-37643211	None:intergenic	35.0%
!	AGTTCAAGAGTACGATGATA+GGG	+	chr1_2:37643261-37643280	None:intergenic	35.0%
!	TACTGTTTCTCATGATCACA+TGG	+	chr1_2:37643294-37643313	None:intergenic	35.0%
	TGTGATCATGAGAAACAGTA+AGG	-	chr1_2:37643294-37643313	Msa0069350:CDS	35.0%
	AACAGTAAGGACCTAGTTAA+TGG	-	chr1_2:37643307-37643326	Msa0069350:CDS	35.0%
	AATTCACAATTTCAGGAAGC+TGG	-	chr1_2:37643595-37643614	Msa0069350:CDS	35.0%
	CAATCGATAGTGTCACAATA+TGG	+	chr1_2:37643629-37643648	None:intergenic	35.0%
	CATATTGTGACACTATCGAT+TGG	-	chr1_2:37643627-37643646	Msa0069350:intron	35.0%
!	GTCTAAGTGGCACATATTTT+TGG	-	chr1_2:37643649-37643668	Msa0069350:intron	35.0%
!!!	TAAGTGGCACATATTTTTGG+TGG	-	chr1_2:37643652-37643671	Msa0069350:intron	35.0%
	GTCACATTGTTGTATTTGGA+AGG	-	chr1_2:37643948-37643967	Msa0069350:CDS	35.0%
	AATTGTGTTCACATTGAGTG+GGG	+	chr1_2:37643983-37644002	None:intergenic	35.0%
	CAATTGTGTTCACATTGAGT+GGG	+	chr1_2:37643984-37644003	None:intergenic	35.0%
	TCAATTGTGTTCACATTGAG+TGG	+	chr1_2:37643985-37644004	None:intergenic	35.0%
!	ATGTAGCTTCTTTGTTTCCA+GGG	-	chr1_2:37644148-37644167	Msa0069350:intron	35.0%
	CACTGAATGAGACTGATAAA+TGG	-	chr1_2:37644178-37644197	Msa0069350:intron	35.0%
	AATATTGCAATGGTTGTGAC+TGG	-	chr1_2:37644279-37644298	Msa0069350:intron	35.0%
!	TCAGGATTCACCTTTTGAAT+AGG	+	chr1_2:37644366-37644385	None:intergenic	35.0%
	ATTCAAAAGGTGAATCCTGA+AGG	-	chr1_2:37644366-37644385	Msa0069350:intron	35.0%
	ATCCTGAAGGAGATATCAAA+TGG	-	chr1_2:37644379-37644398	Msa0069350:intron	35.0%
	AACCATTTGATATCTCCTTC+AGG	+	chr1_2:37644384-37644403	None:intergenic	35.0%
	AGGAGATATCAAATGGTTCT+TGG	-	chr1_2:37644386-37644405	Msa0069350:intron	35.0%
	TATCAAATGGTTCTTGGACA+AGG	-	chr1_2:37644392-37644411	Msa0069350:intron	35.0%
	ATCAAATGGTTCTTGGACAA+GGG	-	chr1_2:37644393-37644412	Msa0069350:intron	35.0%
	ACGTTAGAATGAATGTTGCT+CGG	+	chr1_2:37644466-37644485	None:intergenic	35.0%
!!!	ACGATCCATTTTTAAGATGG+TGG	-	chr1_2:37644546-37644565	Msa0069350:CDS	35.0%
!!!	CGATCCATTTTTAAGATGGT+GGG	-	chr1_2:37644547-37644566	Msa0069350:CDS	35.0%
	TTATCGAGTGAAATTCATGC+AGG	+	chr1_2:37644574-37644593	None:intergenic	35.0%
	TTGGAATGCAACATGCTTTG+TGG	+	chr1_2:37642774-37642793	None:intergenic	40.0%
	ACAATCCTCAACCATGTCAT+TGG	-	chr1_2:37642809-37642828	Msa0069350:three_prime_UTR	40.0%
!!	TCATTGGTGTCACCTCAATT+GGG	-	chr1_2:37642825-37642844	Msa0069350:three_prime_UTR	40.0%
!!	AGGTGTTTTTGTCCCAATTG+AGG	+	chr1_2:37642840-37642859	None:intergenic	40.0%
	CCACCAACATGAATTCTCTT+AGG	+	chr1_2:37642900-37642919	None:intergenic	40.0%
	CCTAAGAGAATTCATGTTGG+TGG	-	chr1_2:37642897-37642916	Msa0069350:three_prime_UTR	40.0%
!	GAGTTCAAGAGTACGATGAT+AGG	+	chr1_2:37643262-37643281	None:intergenic	40.0%
	ACGATTGAGCTCCATTAACT+AGG	+	chr1_2:37643321-37643340	None:intergenic	40.0%
	AGTTAATGGAGCTCAATCGT+TGG	-	chr1_2:37643321-37643340	Msa0069350:CDS	40.0%
	TCGATAGTGTCACAATATGG+TGG	+	chr1_2:37643626-37643645	None:intergenic	40.0%
!!	ACACTATCGATTGGTCTAAG+TGG	-	chr1_2:37643636-37643655	Msa0069350:intron	40.0%
	TTGCTATCAACGTGAGTCTT+TGG	+	chr1_2:37643692-37643711	None:intergenic	40.0%
	ATTGTGTTCACATTGAGTGG+GGG	+	chr1_2:37643982-37644001	None:intergenic	40.0%
	CTATTAGATATGGGACCTGA+TGG	-	chr1_2:37644123-37644142	Msa0069350:intron	40.0%
	AAAGAAGCTACATGTCCATC+AGG	+	chr1_2:37644141-37644160	None:intergenic	40.0%
!	CATGTAGCTTCTTTGTTTCC+AGG	-	chr1_2:37644147-37644166	Msa0069350:intron	40.0%
	TATCAGTCTCATTCAGTGCA+GGG	+	chr1_2:37644176-37644195	None:intergenic	40.0%
	TTATCAGTCTCATTCAGTGC+AGG	+	chr1_2:37644177-37644196	None:intergenic	40.0%
	GTTTACTCTGCACTTGAGAA+AGG	-	chr1_2:37644321-37644340	Msa0069350:intron	40.0%
	CGTTAGAATGAATGTTGCTC+GGG	+	chr1_2:37644465-37644484	None:intergenic	40.0%
	AGGTCCCACCATCTTAAAAA+TGG	+	chr1_2:37644554-37644573	None:intergenic	40.0%
	TTGGAATGCAACATGCTTTG+TGG	+	chr1_2:37642774-37642793	None:intergenic	40.0%
	ACAATCCTCAACCATGTCAT+TGG	-	chr1_2:37642809-37642828	Msa0069350:three_prime_UTR	40.0%
!!	TCATTGGTGTCACCTCAATT+GGG	-	chr1_2:37642825-37642844	Msa0069350:three_prime_UTR	40.0%
!!	AGGTGTTTTTGTCCCAATTG+AGG	+	chr1_2:37642840-37642859	None:intergenic	40.0%
	CCACCAACATGAATTCTCTT+AGG	+	chr1_2:37642900-37642919	None:intergenic	40.0%
	CCTAAGAGAATTCATGTTGG+TGG	-	chr1_2:37642897-37642916	Msa0069350:three_prime_UTR	40.0%
!	GAGTTCAAGAGTACGATGAT+AGG	+	chr1_2:37643262-37643281	None:intergenic	40.0%
	ACGATTGAGCTCCATTAACT+AGG	+	chr1_2:37643321-37643340	None:intergenic	40.0%
	AGTTAATGGAGCTCAATCGT+TGG	-	chr1_2:37643321-37643340	Msa0069350:CDS	40.0%
	TCGATAGTGTCACAATATGG+TGG	+	chr1_2:37643626-37643645	None:intergenic	40.0%
!!	ACACTATCGATTGGTCTAAG+TGG	-	chr1_2:37643636-37643655	Msa0069350:intron	40.0%
	TTGCTATCAACGTGAGTCTT+TGG	+	chr1_2:37643692-37643711	None:intergenic	40.0%
	ATTGTGTTCACATTGAGTGG+GGG	+	chr1_2:37643982-37644001	None:intergenic	40.0%
	CTATTAGATATGGGACCTGA+TGG	-	chr1_2:37644123-37644142	Msa0069350:intron	40.0%
	AAAGAAGCTACATGTCCATC+AGG	+	chr1_2:37644141-37644160	None:intergenic	40.0%
!	CATGTAGCTTCTTTGTTTCC+AGG	-	chr1_2:37644147-37644166	Msa0069350:intron	40.0%
	TATCAGTCTCATTCAGTGCA+GGG	+	chr1_2:37644176-37644195	None:intergenic	40.0%
	TTATCAGTCTCATTCAGTGC+AGG	+	chr1_2:37644177-37644196	None:intergenic	40.0%
	GTTTACTCTGCACTTGAGAA+AGG	-	chr1_2:37644321-37644340	Msa0069350:intron	40.0%
	CGTTAGAATGAATGTTGCTC+GGG	+	chr1_2:37644465-37644484	None:intergenic	40.0%
	AGGTCCCACCATCTTAAAAA+TGG	+	chr1_2:37644554-37644573	None:intergenic	40.0%
	GCTTTGTGGAGTGCATGAAA+GGG	+	chr1_2:37642760-37642779	None:intergenic	45.0%
	TGCTTTGTGGAGTGCATGAA+AGG	+	chr1_2:37642761-37642780	None:intergenic	45.0%
	TGACACCAATGACATGGTTG+AGG	+	chr1_2:37642817-37642836	None:intergenic	45.0%
	TTGAGGTGACACCAATGACA+TGG	+	chr1_2:37642823-37642842	None:intergenic	45.0%
!!	GTCATTGGTGTCACCTCAAT+TGG	-	chr1_2:37642824-37642843	Msa0069350:three_prime_UTR	45.0%
	TGTGTCTTAGAGGGCTATAG+AGG	+	chr1_2:37642860-37642879	None:intergenic	45.0%
!!	GAGAATTCATGTTGGTGGCT+TGG	-	chr1_2:37642902-37642921	Msa0069350:three_prime_UTR	45.0%
	GGAGAGGTCAGCAACATATT+TGG	+	chr1_2:37642997-37643016	None:intergenic	45.0%
!!!	TTCACTGTCGTTTTGTCTCC+TGG	-	chr1_2:37643044-37643063	Msa0069350:three_prime_UTR	45.0%
	CAAGTAAATGGCTATCTCCG+AGG	-	chr1_2:37643172-37643191	Msa0069350:CDS	45.0%
	TTAGGTGTTAGCTCAGTGCT+CGG	+	chr1_2:37643236-37643255	None:intergenic	45.0%
	GAGTACGATGATAGGGTCTT+AGG	+	chr1_2:37643254-37643273	None:intergenic	45.0%
	AATGGAGCTCAATCGTTGGA+TGG	-	chr1_2:37643325-37643344	Msa0069350:CDS	45.0%
	CTATTTGGCCCTAGCGAAAT+TGG	-	chr1_2:37643449-37643468	Msa0069350:CDS	45.0%
	TTCACATTGAGTGGGGGAAT+TGG	+	chr1_2:37643976-37643995	None:intergenic	45.0%
	TGAGACAACCCTAAGACGTT+TGG	-	chr1_2:37644041-37644060	Msa0069350:intron	45.0%
	GCTTGTGACCAAACGTCTTA+GGG	+	chr1_2:37644052-37644071	None:intergenic	45.0%
	TGCTTGTGACCAAACGTCTT+AGG	+	chr1_2:37644053-37644072	None:intergenic	45.0%
	GTAAATGTAATCCTCTCCGG+CGG	+	chr1_2:37644234-37644253	None:intergenic	45.0%
!	AAGCAATATGATGGGACTGC+TGG	-	chr1_2:37644670-37644689	Msa0069350:CDS	45.0%
	GCTTTGTGGAGTGCATGAAA+GGG	+	chr1_2:37642760-37642779	None:intergenic	45.0%
	TGCTTTGTGGAGTGCATGAA+AGG	+	chr1_2:37642761-37642780	None:intergenic	45.0%
	TGACACCAATGACATGGTTG+AGG	+	chr1_2:37642817-37642836	None:intergenic	45.0%
	TTGAGGTGACACCAATGACA+TGG	+	chr1_2:37642823-37642842	None:intergenic	45.0%
!!	GTCATTGGTGTCACCTCAAT+TGG	-	chr1_2:37642824-37642843	Msa0069350:three_prime_UTR	45.0%
	TGTGTCTTAGAGGGCTATAG+AGG	+	chr1_2:37642860-37642879	None:intergenic	45.0%
!!	GAGAATTCATGTTGGTGGCT+TGG	-	chr1_2:37642902-37642921	Msa0069350:three_prime_UTR	45.0%
	GGAGAGGTCAGCAACATATT+TGG	+	chr1_2:37642997-37643016	None:intergenic	45.0%
!!!	TTCACTGTCGTTTTGTCTCC+TGG	-	chr1_2:37643044-37643063	Msa0069350:three_prime_UTR	45.0%
	CAAGTAAATGGCTATCTCCG+AGG	-	chr1_2:37643172-37643191	Msa0069350:CDS	45.0%
	TTAGGTGTTAGCTCAGTGCT+CGG	+	chr1_2:37643236-37643255	None:intergenic	45.0%
	GAGTACGATGATAGGGTCTT+AGG	+	chr1_2:37643254-37643273	None:intergenic	45.0%
	AATGGAGCTCAATCGTTGGA+TGG	-	chr1_2:37643325-37643344	Msa0069350:CDS	45.0%
	CTATTTGGCCCTAGCGAAAT+TGG	-	chr1_2:37643449-37643468	Msa0069350:CDS	45.0%
	TTCACATTGAGTGGGGGAAT+TGG	+	chr1_2:37643976-37643995	None:intergenic	45.0%
	TGAGACAACCCTAAGACGTT+TGG	-	chr1_2:37644041-37644060	Msa0069350:intron	45.0%
	GCTTGTGACCAAACGTCTTA+GGG	+	chr1_2:37644052-37644071	None:intergenic	45.0%
	TGCTTGTGACCAAACGTCTT+AGG	+	chr1_2:37644053-37644072	None:intergenic	45.0%
	GTAAATGTAATCCTCTCCGG+CGG	+	chr1_2:37644234-37644253	None:intergenic	45.0%
!	AAGCAATATGATGGGACTGC+TGG	-	chr1_2:37644670-37644689	Msa0069350:CDS	45.0%
!!	TCATGTTGGTGGCTTGGTGA+AGG	-	chr1_2:37642908-37642927	Msa0069350:three_prime_UTR	50.0%
	GGATGTGCATGTGCTAAGCA+AGG	-	chr1_2:37642950-37642969	Msa0069350:three_prime_UTR	50.0%
!	GGAGCATCTTGCTGTGTCTT+TGG	-	chr1_2:37642971-37642990	Msa0069350:three_prime_UTR	50.0%
!	CTTAGATACTTGACGGGTCC+AGG	+	chr1_2:37643065-37643084	None:intergenic	50.0%
	CTGGACCCGTCAAGTATCTA+AGG	-	chr1_2:37643063-37643082	Msa0069350:three_prime_UTR	50.0%
	GATGATTCCCTACCAGCTGA+TGG	-	chr1_2:37644003-37644022	Msa0069350:intron	50.0%
!!	GTGCTGCTTCAAGGCTCTAT+AGG	-	chr1_2:37644415-37644434	Msa0069350:intron	50.0%
!!	TCATGTTGGTGGCTTGGTGA+AGG	-	chr1_2:37642908-37642927	Msa0069350:three_prime_UTR	50.0%
	GGATGTGCATGTGCTAAGCA+AGG	-	chr1_2:37642950-37642969	Msa0069350:three_prime_UTR	50.0%
!	GGAGCATCTTGCTGTGTCTT+TGG	-	chr1_2:37642971-37642990	Msa0069350:three_prime_UTR	50.0%
!	CTTAGATACTTGACGGGTCC+AGG	+	chr1_2:37643065-37643084	None:intergenic	50.0%
	CTGGACCCGTCAAGTATCTA+AGG	-	chr1_2:37643063-37643082	Msa0069350:three_prime_UTR	50.0%
	GATGATTCCCTACCAGCTGA+TGG	-	chr1_2:37644003-37644022	Msa0069350:intron	50.0%
!!	GTGCTGCTTCAAGGCTCTAT+AGG	-	chr1_2:37644415-37644434	Msa0069350:intron	50.0%
	TGCTGCTCCATCAGCTGGTA+GGG	+	chr1_2:37644013-37644032	None:intergenic	55.0%
	ACATCTGCTGCTCCATCAGC+TGG	+	chr1_2:37644018-37644037	None:intergenic	55.0%
!	TCATTCAGTGCAGGGTACCC+TGG	+	chr1_2:37644168-37644187	None:intergenic	55.0%
	AATGTAATCCTCTCCGGCGG+CGG	+	chr1_2:37644231-37644250	None:intergenic	55.0%
	GCAATGGTTGTGACTGGTGC+TGG	-	chr1_2:37644285-37644304	Msa0069350:intron	55.0%
!!	TGGACAAGGGTGCTGCTTCA+AGG	-	chr1_2:37644406-37644425	Msa0069350:intron	55.0%
	TGCTGCTCCATCAGCTGGTA+GGG	+	chr1_2:37644013-37644032	None:intergenic	55.0%
	ACATCTGCTGCTCCATCAGC+TGG	+	chr1_2:37644018-37644037	None:intergenic	55.0%
!	TCATTCAGTGCAGGGTACCC+TGG	+	chr1_2:37644168-37644187	None:intergenic	55.0%
	AATGTAATCCTCTCCGGCGG+CGG	+	chr1_2:37644231-37644250	None:intergenic	55.0%
	GCAATGGTTGTGACTGGTGC+TGG	-	chr1_2:37644285-37644304	Msa0069350:intron	55.0%
!!	TGGACAAGGGTGCTGCTTCA+AGG	-	chr1_2:37644406-37644425	Msa0069350:intron	55.0%
	CTGCTGCTCCATCAGCTGGT+AGG	+	chr1_2:37644014-37644033	None:intergenic	60.0%
	GAATGCACCTAAACCGCCGC+CGG	-	chr1_2:37644215-37644234	Msa0069350:intron	60.0%
	CTGCTGCTCCATCAGCTGGT+AGG	+	chr1_2:37644014-37644033	None:intergenic	60.0%
	GAATGCACCTAAACCGCCGC+CGG	-	chr1_2:37644215-37644234	Msa0069350:intron	60.0%
	ATCCTCTCCGGCGGCGGTTT+AGG	+	chr1_2:37644225-37644244	None:intergenic	65.0%
	ATCCTCTCCGGCGGCGGTTT+AGG	+	chr1_2:37644225-37644244	None:intergenic	65.0%
	CACCTAAACCGCCGCCGGAG+AGG	-	chr1_2:37644220-37644239	Msa0069350:intron	70.0%
	CACCTAAACCGCCGCCGGAG+AGG	-	chr1_2:37644220-37644239	Msa0069350:intron	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_2	gene	37642682	37644918	37642682	ID=Msa0069350;Name=Msa0069350
chr1_2	mRNA	37642682	37644918	37642682	ID=Msa0069350-mRNA-1;Parent=Msa0069350;Name=Msa0069350-mRNA-1;_AED=0.20;_eAED=0.20;_QI=53\|1\|1\|1\|1\|1\|3\|478\|318
chr1_2	exon	37642682	37643630	37642682	ID=Msa0069350-mRNA-1:exon:11906;Parent=Msa0069350-mRNA-1
chr1_2	exon	37643855	37643990	37643855	ID=Msa0069350-mRNA-1:exon:11905;Parent=Msa0069350-mRNA-1
chr1_2	exon	37644516	37644918	37644516	ID=Msa0069350-mRNA-1:exon:11904;Parent=Msa0069350-mRNA-1
chr1_2	five_prime_UTR	37644866	37644918	37644866	ID=Msa0069350-mRNA-1:five_prime_utr;Parent=Msa0069350-mRNA-1
chr1_2	CDS	37644516	37644865	37644516	ID=Msa0069350-mRNA-1:cds;Parent=Msa0069350-mRNA-1
chr1_2	CDS	37643855	37643990	37643855	ID=Msa0069350-mRNA-1:cds;Parent=Msa0069350-mRNA-1
chr1_2	CDS	37643160	37643630	37643160	ID=Msa0069350-mRNA-1:cds;Parent=Msa0069350-mRNA-1
chr1_2	three_prime_UTR	37642682	37643159	37642682	ID=Msa0069350-mRNA-1:three_prime_utr;Parent=Msa0069350-mRNA-1

Gene Sequence

>Msa0069350

ATGGCTACTTCAACATTTCTGACCCTTTCATGCACTCCACAAAGCATGTTGCATTCCAAACATAAGTCACAAACACAATCCTCAACCATGTCATTGGTGTCACCTCAATTGGGACAAAAACACCTCTATAGCCCTCTAAGACACAATGTATCTTCTTTGAAACCTAAGAGAATTCATGTTGGTGGCTTGGTGAAGGCATCAATGAATAACAACAAGGATGTGCATGTGCTAAGCAAGGAGCATCTTGCTGTGTCTTTGGCCAAATATGTTGCTGACCTCTCCGAAAAATACATTAGAGAGAAGGGGCGTTTCACTGTCGTTTTGTCTCCTGGACCCGTCAAGTATCTAAGGAAGCTGGTCGAACCACCATATTGTGACACTATCGATTGGTCTAAGTGGCACATATTTTTGGTGGATGAGAGAGTAGTGCCAAAGACTCACGTTGATAGCAATTACAAACTTGCTAATGATAGCTTTATCTCCAAGGTACCAATTCCCCCACTCAATGTGAACACAATTGATGATTCCCTACCAGCTGATGGAGCAGCAGATGTTTATGAGACAACCCTAAGACGTTTGGTCACAAGCAATGTGATATCAAAATCATCCCTAACTAACTTCCCAAAATTTGATCTTATGCTATTAGATATGGGACCTGATGGACATGTAGCTTCTTTGTTTCCAGGGTACCCTGCACTGAATGAGACTGATAAATGGGTTACATATCTTAAGAATGCACCTAAACCGCCGCCGGAGAGGATTACATTTACATTGCCAGTGATTAATGCTACTTCAAATATTGCAATGGTTGTGACTGGTGCTGGTAAAGCTGATGCTGTTTACTCTGCACTTGAGAAAGGTCCTAATGATAATAAGCTTCCTATTCAAAAGGTGAATCCTGAAGGAGATATCAAATGGTTCTTGGACAAGGGTGCTGCTTCAAGGCTCTATAGGTAG

Protein sequence

>Msa0069350

MATSTFLTLSCTPQSMLHSKHKSQTQSSTMSLVSPQLGQKHLYSPLRHNVSSLKPKRIHVGGLVKASMNNNKDVHVLSKEHLAVSLAKYVADLSEKYIREKGRFTVVLSPGPVKYLRKLVEPPYCDTIDWSKWHIFLVDERVVPKTHVDSNYKLANDSFISKVPIPPLNVNTIDDSLPADGAADVYETTLRRLVTSNVISKSSLTNFPKFDLMLLDMGPDGHVASLFPGYPALNETDKWVTYLKNAPKPPPERITFTLPVINATSNIAMVVTGAGKADAVYSALEKGPNDNKLPIQKVNPEGDIKWFLDKGAASRLYR*