Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0254540 | AES66525.2 | 97.758 | 223 | 5 | 0 | 1 | 223 | 80 | 302 | 8.73e-154 | 447 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0254540 | sp|Q9ZV88|BEH4_ARATH | 60.084 | 238 | 69 | 7 | 1 | 221 | 81 | 309 | 2.37e-73 | 228 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0254540 | G7IR04 | 97.758 | 223 | 5 | 0 | 1 | 223 | 80 | 302 | 4.17e-154 | 447 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0254540 | TF | BES1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0069350 | Msa0254540 | 0.805484 | 1.305312e-49 | -8.615850e-47 |
| Msa0134930 | Msa0254540 | 0.814600 | 1.418243e-51 | -8.615850e-47 |
| Msa0214210 | Msa0254540 | 0.858725 | 6.765559e-63 | -8.615850e-47 |
| Msa0233570 | Msa0254540 | 0.801753 | 7.760594e-49 | -8.615850e-47 |
| Msa0254540 | Msa0274650 | 0.800058 | 1.721717e-48 | -8.615850e-47 |
| Msa0254540 | Msa0293840 | 0.948320 | 1.192474e-106 | -8.615850e-47 |
| Msa0254540 | Msa0309060 | -0.808568 | 2.905517e-50 | -8.615850e-47 |
| Msa0254540 | Msa0312250 | 0.806617 | 7.540972e-50 | -8.615850e-47 |
| Msa0254540 | Msa0332280 | 0.974283 | 6.967310e-138 | -8.615850e-47 |
| Msa0254540 | Msa0557850 | 0.825367 | 4.871967e-54 | -8.615850e-47 |
| Msa0254540 | Msa0653160 | 0.834290 | 3.265765e-56 | -8.615850e-47 |
| Msa0254540 | Msa0749190 | 0.802816 | 4.688506e-49 | -8.615850e-47 |
| Msa0254540 | Msa0930950 | -0.827573 | 1.451835e-54 | -8.615850e-47 |
| Msa0254540 | Msa0978980 | 0.804507 | 2.090114e-49 | -8.615850e-47 |
| Msa0254540 | Msa1033420 | 0.828331 | 9.541817e-55 | -8.615850e-47 |
| Msa0254540 | Msa1073060 | 0.843068 | 1.758347e-58 | -8.615850e-47 |
| Msa0254540 | Msa1160780 | 0.859268 | 4.650930e-63 | -8.615850e-47 |
| Msa0254540 | Msa1349850 | -0.830594 | 2.689492e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0254540 | MtrunA17_Chr2g0315201 | 97.758 | 223 | 5 | 0 | 1 | 223 | 80 | 302 | 7.62e-157 | 437 |
| Msa0254540 | MtrunA17_Chr2g0315211 | 67.544 | 228 | 67 | 1 | 1 | 221 | 80 | 307 | 1.64e-102 | 299 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0254540 | AT1G78700.1 | 60.084 | 238 | 69 | 7 | 1 | 221 | 81 | 309 | 2.41e-74 | 228 |
| Msa0254540 | AT4G18890.2 | 50.000 | 228 | 68 | 10 | 1 | 221 | 4 | 192 | 9.68e-51 | 164 |
| Msa0254540 | AT4G18890.1 | 50.000 | 228 | 68 | 10 | 1 | 221 | 80 | 268 | 8.34e-50 | 164 |
Find 83 sgRNAs with CRISPR-Local
Find 390 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATCCCAGCAAACCATTC+AGG | 0.319016 | 2_2:+48084620 | None:intergenic |
| TACTCCTTCCTGCCTTCTTC+CGG | 0.325671 | 2_2:-48084674 | Msa0254540:CDS |
| AAGGAAGACGAGCCGGGGCT+TGG | 0.330367 | 2_2:+48084947 | None:intergenic |
| TCGAAGCCCATTTGCCTTCA+AGG | 0.331246 | 2_2:-48084552 | Msa0254540:CDS |
| CATTTGGAAGCAACACATTT+GGG | 0.336623 | 2_2:-48084397 | Msa0254540:CDS |
| CTCTCCACAGCTTCATCTTC+AGG | 0.340264 | 2_2:-48084848 | Msa0254540:CDS |
| ATGGAGCCACTATGAAAATA+AGG | 0.355143 | 2_2:+48084803 | None:intergenic |
| GCATTTGGAAGCAACACATT+TGG | 0.360050 | 2_2:-48084398 | Msa0254540:CDS |
| GCATCTTCCTTGAAGGCAAA+TGG | 0.365893 | 2_2:+48084545 | None:intergenic |
| ATGTGGACCCCTGGACAGTC+AGG | 0.369643 | 2_2:-48084500 | Msa0254540:CDS |
| ATCTCAGATGAATTTGCATT+TGG | 0.385434 | 2_2:-48084413 | Msa0254540:CDS |
| CTTGGGAAGGAAGACGAGCC+GGG | 0.389874 | 2_2:+48084941 | None:intergenic |
| TCTGCACGGCCCGGGTGGAC+TGG | 0.392696 | 2_2:-48084704 | Msa0254540:CDS |
| GTTGATCCTGAATGGTTTGC+TGG | 0.393927 | 2_2:-48084626 | Msa0254540:CDS |
| ACTATCTGACGGCCAGGGCT+TGG | 0.399313 | 2_2:+48084647 | None:intergenic |
| GAGCTCAGGGGAGGTGTGAC+AGG | 0.403615 | 2_2:+48084773 | None:intergenic |
| CATCTGCTACAAATTCTTCA+TGG | 0.405598 | 2_2:+48084345 | None:intergenic |
| AAATAAGGATGAGGAAGTTT+CGG | 0.409483 | 2_2:+48084818 | None:intergenic |
| CATTTGGGATTGTGAAGCCT+TGG | 0.410546 | 2_2:-48084382 | Msa0254540:CDS |
| GCCATTAGAGAACATGGATA+TGG | 0.425810 | 2_2:-48085011 | None:intergenic |
| ACGGCCAGGGCTTGGAGGAC+CGG | 0.427775 | 2_2:+48084655 | None:intergenic |
| TCAAAGCCTGCTGCAATAGC+TGG | 0.436153 | 2_2:+48084467 | None:intergenic |
| GAACATGCCCCTGACTGTCC+AGG | 0.438349 | 2_2:+48084491 | None:intergenic |
| TTCTAGCAGTCGGAGAGCTC+AGG | 0.440476 | 2_2:+48084759 | None:intergenic |
| CATCTTCCTTGAAGGCAAAT+GGG | 0.441986 | 2_2:+48084546 | None:intergenic |
| TCTGAGATGGCTTCAGACAT+TGG | 0.466820 | 2_2:+48084428 | None:intergenic |
| AGATTGAATGTCGGAGAAGT+TGG | 0.467632 | 2_2:+48084581 | None:intergenic |
| TGTTCTCCAGCTATTGCAGC+AGG | 0.468934 | 2_2:-48084473 | Msa0254540:CDS |
| GGGCTTGGAGGACCGGAAGA+AGG | 0.476639 | 2_2:+48084662 | None:intergenic |
| TGGATCCTTTCTCCTTCCCA+AGG | 0.477640 | 2_2:+48084365 | None:intergenic |
| CAGGCAGCGGTTCGCGCATG+TGG | 0.479649 | 2_2:-48084517 | Msa0254540:CDS |
| GCGTTACGATTTGCAGCGTA+AGG | 0.480138 | 2_2:+48084905 | None:intergenic |
| ATGATCAATCTGCACGGCCC+GGG | 0.481435 | 2_2:-48084712 | Msa0254540:CDS |
| ATCTGACGGCCAGGGCTTGG+AGG | 0.481702 | 2_2:+48084650 | None:intergenic |
| GTCAGATAGTTGATCCTGAA+TGG | 0.488622 | 2_2:-48084634 | Msa0254540:CDS |
| TAAGGGGATGATGATGGACT+TGG | 0.490391 | 2_2:+48084923 | None:intergenic |
| ATTTGGGATTGTGAAGCCTT+GGG | 0.491602 | 2_2:-48084381 | Msa0254540:CDS |
| ACTTGGGAAGGAAGACGAGC+CGG | 0.496049 | 2_2:+48084940 | None:intergenic |
| TCTTCCGGTCCTCCAAGCCC+TGG | 0.498896 | 2_2:-48084659 | Msa0254540:CDS |
| AAATGCAAATTCATCTGAGA+TGG | 0.501657 | 2_2:+48084415 | None:intergenic |
| GATGATCAATCTGCACGGCC+CGG | 0.503778 | 2_2:-48084713 | Msa0254540:CDS |
| TTGGAGGACCGGAAGAAGGC+AGG | 0.505728 | 2_2:+48084666 | None:intergenic |
| TGAAGCCTTGGGAAGGAGAA+AGG | 0.506728 | 2_2:-48084370 | Msa0254540:CDS |
| GGATCAACTATCTGACGGCC+AGG | 0.508622 | 2_2:+48084641 | None:intergenic |
| ATGGTAATTCTCTCATTCCA+TGG | 0.516736 | 2_2:-48084880 | Msa0254540:CDS |
| AGGTGTGACAGGAGCACTGA+TGG | 0.518748 | 2_2:+48084784 | None:intergenic |
| CGTTACGATTTGCAGCGTAA+GGG | 0.534170 | 2_2:+48084906 | None:intergenic |
| AAGACGAGCCGGGGCTTGGA+TGG | 0.534291 | 2_2:+48084951 | None:intergenic |
| GTTACGATTTGCAGCGTAAG+GGG | 0.536907 | 2_2:+48084907 | None:intergenic |
| GCTGCAAATCGTAACGCTGA+TGG | 0.540162 | 2_2:-48084899 | Msa0254540:CDS |
| TTGGGAAGGAAGACGAGCCG+GGG | 0.553399 | 2_2:+48084942 | None:intergenic |
| TCTAGCAGTCGGAGAGCTCA+GGG | 0.554727 | 2_2:+48084760 | None:intergenic |
| AACATGCCCCTGACTGTCCA+GGG | 0.556233 | 2_2:+48084492 | None:intergenic |
| CCACTATGAAAATAAGGATG+AGG | 0.557357 | 2_2:+48084809 | None:intergenic |
| GTAATGTTGTCCAGTCCACC+CGG | 0.557358 | 2_2:+48084694 | None:intergenic |
| GGTTCGCGCATGTGGACCCC+TGG | 0.559214 | 2_2:-48084509 | Msa0254540:CDS |
| GAGAACATGGATATGGTTGG+TGG | 0.561198 | 2_2:-48085004 | None:intergenic |
| GGATGATGATGGACTTGGGA+AGG | 0.561521 | 2_2:+48084928 | None:intergenic |
| TCATCTTACCATCCAAGCCC+CGG | 0.562153 | 2_2:-48084959 | Msa0254540:CDS |
| GCAGCGTAAGGGGATGATGA+TGG | 0.565277 | 2_2:+48084917 | None:intergenic |
| ATCAATCTGCACGGCCCGGG+TGG | 0.570226 | 2_2:-48084709 | Msa0254540:CDS |
| TTGATCCTGAATGGTTTGCT+GGG | 0.572973 | 2_2:-48084625 | Msa0254540:CDS |
| TGTGGACCCCTGGACAGTCA+GGG | 0.577345 | 2_2:-48084499 | Msa0254540:CDS |
| GGGATTGTGAAGCCTTGGGA+AGG | 0.580106 | 2_2:-48084377 | Msa0254540:CDS |
| AGGACCGGAAGAAGGCAGGA+AGG | 0.591677 | 2_2:+48084670 | None:intergenic |
| GTGGACCCCTGGACAGTCAG+GGG | 0.607774 | 2_2:-48084498 | Msa0254540:CDS |
| CGAGATACAAGATTGAATGT+CGG | 0.609297 | 2_2:+48084572 | None:intergenic |
| CTTGGATGGTAAGATGAACA+AGG | 0.613106 | 2_2:+48084965 | None:intergenic |
| GATCAACTATCTGACGGCCA+GGG | 0.614613 | 2_2:+48084642 | None:intergenic |
| TTAGAGAACATGGATATGGT+TGG | 0.620971 | 2_2:-48085007 | None:intergenic |
| AATCGCGGTGTTCTAGCAGT+CGG | 0.621032 | 2_2:+48084749 | None:intergenic |
| AAGGGGATGATGATGGACTT+GGG | 0.629431 | 2_2:+48084924 | None:intergenic |
| CTGAAGATGAAGCTGTGGAG+AGG | 0.631008 | 2_2:+48084849 | None:intergenic |
| GCAGTCGGAGAGCTCAGGGG+AGG | 0.643740 | 2_2:+48084764 | None:intergenic |
| TGATCCTGAAGATGAAGCTG+TGG | 0.648099 | 2_2:+48084844 | None:intergenic |
| GGAGAAGTTGGACTAGCATG+TGG | 0.648324 | 2_2:+48084593 | None:intergenic |
| TAATGTTGTCCAGTCCACCC+GGG | 0.661081 | 2_2:+48084695 | None:intergenic |
| ACATGCCCCTGACTGTCCAG+GGG | 0.666992 | 2_2:+48084493 | None:intergenic |
| CTAGCAGTCGGAGAGCTCAG+GGG | 0.684940 | 2_2:+48084761 | None:intergenic |
| ATTCAGGATCAACTATCTGA+CGG | 0.695991 | 2_2:+48084636 | None:intergenic |
| TTGGATGGTAAGATGAACAA+GGG | 0.701552 | 2_2:+48084966 | None:intergenic |
| ACTTCGATGATCAATCTGCA+CGG | 0.712290 | 2_2:-48084718 | Msa0254540:CDS |
| TCGAAGTCAGCATTCAATCG+CGG | 0.720698 | 2_2:+48084734 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGAATATTTAATTTGTAATA+GGG | - | chr2_2:48084505-48084524 | Msa0254540:CDS | 10.0% |
| !!! | TGAATATTTAATTTGTAATA+GGG | - | chr2_2:48084505-48084524 | Msa0254540:CDS | 10.0% |
| !!! | TTACGATATTTTGAAAATTT+TGG | + | chr2_2:48084091-48084110 | None:intergenic | 15.0% |
| !!! | GTGAATATTTAATTTGTAAT+AGG | - | chr2_2:48084504-48084523 | Msa0254540:CDS | 15.0% |
| !!! | TTACGATATTTTGAAAATTT+TGG | + | chr2_2:48084091-48084110 | None:intergenic | 15.0% |
| !!! | GTGAATATTTAATTTGTAAT+AGG | - | chr2_2:48084504-48084523 | Msa0254540:CDS | 15.0% |
| !! | ATTATCATTATCATCATTGT+AGG | - | chr2_2:48083432-48083451 | Msa0254540:intron | 20.0% |
| !! | ACATAAACATTAACTTATGT+TGG | - | chr2_2:48083787-48083806 | Msa0254540:intron | 20.0% |
| !! | TACTATATACATGTTTAGTT+AGG | - | chr2_2:48083907-48083926 | Msa0254540:intron | 20.0% |
| !! | TAGTACTATACTTTATCAAT+TGG | - | chr2_2:48083997-48084016 | Msa0254540:intron | 20.0% |
| !!! | TTAATTTGTAATAGGGTTTT+TGG | - | chr2_2:48084512-48084531 | Msa0254540:CDS | 20.0% |
| !!! | TGAAAAAGTATGAAGAAATA+TGG | + | chr2_2:48084748-48084767 | None:intergenic | 20.0% |
| !!! | TGTAAATTGTATTGGTTATT+TGG | - | chr2_2:48084959-48084978 | Msa0254540:CDS | 20.0% |
| !! | ATTATCATTATCATCATTGT+AGG | - | chr2_2:48083432-48083451 | Msa0254540:intron | 20.0% |
| !! | ACATAAACATTAACTTATGT+TGG | - | chr2_2:48083787-48083806 | Msa0254540:intron | 20.0% |
| !! | TACTATATACATGTTTAGTT+AGG | - | chr2_2:48083907-48083926 | Msa0254540:intron | 20.0% |
| !! | TAGTACTATACTTTATCAAT+TGG | - | chr2_2:48083997-48084016 | Msa0254540:intron | 20.0% |
| !!! | TTAATTTGTAATAGGGTTTT+TGG | - | chr2_2:48084512-48084531 | Msa0254540:CDS | 20.0% |
| !!! | TGAAAAAGTATGAAGAAATA+TGG | + | chr2_2:48084748-48084767 | None:intergenic | 20.0% |
| !!! | TGTAAATTGTATTGGTTATT+TGG | - | chr2_2:48084959-48084978 | Msa0254540:CDS | 20.0% |
| !! | TGATAATGATAATAAGTACC+TGG | + | chr2_2:48083425-48083444 | None:intergenic | 25.0% |
| ! | ATGTAAAGGAAAAATTGCAA+AGG | + | chr2_2:48083879-48083898 | None:intergenic | 25.0% |
| !! | TGCAATTTTTCCTTTACATT+TGG | - | chr2_2:48083880-48083899 | Msa0254540:intron | 25.0% |
| ! | ACAACAATGATGAAATGAAT+GGG | + | chr2_2:48083951-48083970 | None:intergenic | 25.0% |
| ! | TACAACAATGATGAAATGAA+TGG | + | chr2_2:48083952-48083971 | None:intergenic | 25.0% |
| ! | GTGAGAAATATTACAATAGA+AGG | + | chr2_2:48084149-48084168 | None:intergenic | 25.0% |
| ! | GGGTTAACAGTAAAAAAAAA+AGG | - | chr2_2:48084342-48084361 | Msa0254540:intron | 25.0% |
| !!! | TGATTTTTTAGAAAACACGA+GGG | + | chr2_2:48084440-48084459 | None:intergenic | 25.0% |
| !!! | TGTGTGTGTAAATTTTTAGA+AGG | + | chr2_2:48084594-48084613 | None:intergenic | 25.0% |
| ! | AAAGTATGAAGAAATATGGA+TGG | + | chr2_2:48084744-48084763 | None:intergenic | 25.0% |
| !! | TGATAATGATAATAAGTACC+TGG | + | chr2_2:48083425-48083444 | None:intergenic | 25.0% |
| ! | ATGTAAAGGAAAAATTGCAA+AGG | + | chr2_2:48083879-48083898 | None:intergenic | 25.0% |
| !! | TGCAATTTTTCCTTTACATT+TGG | - | chr2_2:48083880-48083899 | Msa0254540:intron | 25.0% |
| ! | ACAACAATGATGAAATGAAT+GGG | + | chr2_2:48083951-48083970 | None:intergenic | 25.0% |
| ! | TACAACAATGATGAAATGAA+TGG | + | chr2_2:48083952-48083971 | None:intergenic | 25.0% |
| ! | GTGAGAAATATTACAATAGA+AGG | + | chr2_2:48084149-48084168 | None:intergenic | 25.0% |
| ! | GGGTTAACAGTAAAAAAAAA+AGG | - | chr2_2:48084342-48084361 | Msa0254540:intron | 25.0% |
| !!! | TGATTTTTTAGAAAACACGA+GGG | + | chr2_2:48084440-48084459 | None:intergenic | 25.0% |
| !!! | TGTGTGTGTAAATTTTTAGA+AGG | + | chr2_2:48084594-48084613 | None:intergenic | 25.0% |
| ! | AAAGTATGAAGAAATATGGA+TGG | + | chr2_2:48084744-48084763 | None:intergenic | 25.0% |
| AAATAAGGATGAGGAAGTTT+CGG | + | chr2_2:48082899-48082918 | None:intergenic | 30.0% | |
| AAATGCAAATTCATCTGAGA+TGG | + | chr2_2:48083302-48083321 | None:intergenic | 30.0% | |
| ATCTCAGATGAATTTGCATT+TGG | - | chr2_2:48083301-48083320 | Msa0254540:intron | 30.0% | |
| TGTCAAAAGAACATTTCAGA+AGG | + | chr2_2:48083635-48083654 | None:intergenic | 30.0% | |
| !!! | TTCTGAAATGTTCTTTTGAC+AGG | - | chr2_2:48083634-48083653 | Msa0254540:intron | 30.0% |
| CAGGTGAATTCTTTGTAAAT+AGG | - | chr2_2:48083653-48083672 | Msa0254540:intron | 30.0% | |
| !!! | ACATTTTTTGTAATCGAGCT+CGG | + | chr2_2:48083763-48083782 | None:intergenic | 30.0% |
| TGTTGAGTAAGAAATGTTTG+AGG | - | chr2_2:48083813-48083832 | Msa0254540:intron | 30.0% | |
| ! | GTAAGAAATGTTTGAGGTAA+TGG | - | chr2_2:48083819-48083838 | Msa0254540:intron | 30.0% |
| ATAGTACTAGCCAAATGTAA+AGG | + | chr2_2:48083893-48083912 | None:intergenic | 30.0% | |
| ! | GTCTTGTTAAACCTTATCAT+TGG | - | chr2_2:48083973-48083992 | Msa0254540:intron | 30.0% |
| TATAGTACTAGCCAATGATA+AGG | + | chr2_2:48083987-48084006 | None:intergenic | 30.0% | |
| CTATACTTTATCAATTGGCT+TGG | - | chr2_2:48084002-48084021 | Msa0254540:intron | 30.0% | |
| !! | AACATTCTCTAAAGCTATTC+AGG | + | chr2_2:48084044-48084063 | None:intergenic | 30.0% |
| CAACCTATTAGCTAATTCAA+TGG | - | chr2_2:48084065-48084084 | Msa0254540:intron | 30.0% | |
| AAATATTACAATAGAAGGCC+GGG | + | chr2_2:48084144-48084163 | None:intergenic | 30.0% | |
| GAAATATTACAATAGAAGGC+CGG | + | chr2_2:48084145-48084164 | None:intergenic | 30.0% | |
| ! | TAAACTCCTTTTATGACGAA+TGG | - | chr2_2:48084200-48084219 | Msa0254540:intron | 30.0% |
| ! | CTCACGCAAATTAGTTTATT+TGG | + | chr2_2:48084404-48084423 | None:intergenic | 30.0% |
| !!! | GTGATTTTTTAGAAAACACG+AGG | + | chr2_2:48084441-48084460 | None:intergenic | 30.0% |
| !! | GTGTGTAAATTTTTAGAAGG+TGG | + | chr2_2:48084591-48084610 | None:intergenic | 30.0% |
| !!! | GTTTTTTCCATTTGAAAGCA+TGG | + | chr2_2:48084628-48084647 | None:intergenic | 30.0% |
| GAGAGTTAGAGAAAAAAAAC+AGG | + | chr2_2:48084693-48084712 | None:intergenic | 30.0% | |
| ! | GACAAAAACATGTTTTCTCT+TGG | + | chr2_2:48084823-48084842 | None:intergenic | 30.0% |
| ! | TTTTGTCCATAAACACACAT+CGG | - | chr2_2:48084836-48084855 | Msa0254540:CDS | 30.0% |
| GTGCATAGTGTAAATTGTAT+TGG | - | chr2_2:48084951-48084970 | Msa0254540:CDS | 30.0% | |
| AAATAAGGATGAGGAAGTTT+CGG | + | chr2_2:48082899-48082918 | None:intergenic | 30.0% | |
| AAATGCAAATTCATCTGAGA+TGG | + | chr2_2:48083302-48083321 | None:intergenic | 30.0% | |
| ATCTCAGATGAATTTGCATT+TGG | - | chr2_2:48083301-48083320 | Msa0254540:intron | 30.0% | |
| TGTCAAAAGAACATTTCAGA+AGG | + | chr2_2:48083635-48083654 | None:intergenic | 30.0% | |
| !!! | TTCTGAAATGTTCTTTTGAC+AGG | - | chr2_2:48083634-48083653 | Msa0254540:intron | 30.0% |
| CAGGTGAATTCTTTGTAAAT+AGG | - | chr2_2:48083653-48083672 | Msa0254540:intron | 30.0% | |
| !!! | ACATTTTTTGTAATCGAGCT+CGG | + | chr2_2:48083763-48083782 | None:intergenic | 30.0% |
| TGTTGAGTAAGAAATGTTTG+AGG | - | chr2_2:48083813-48083832 | Msa0254540:intron | 30.0% | |
| ! | GTAAGAAATGTTTGAGGTAA+TGG | - | chr2_2:48083819-48083838 | Msa0254540:intron | 30.0% |
| ATAGTACTAGCCAAATGTAA+AGG | + | chr2_2:48083893-48083912 | None:intergenic | 30.0% | |
| ! | GTCTTGTTAAACCTTATCAT+TGG | - | chr2_2:48083973-48083992 | Msa0254540:intron | 30.0% |
| TATAGTACTAGCCAATGATA+AGG | + | chr2_2:48083987-48084006 | None:intergenic | 30.0% | |
| CTATACTTTATCAATTGGCT+TGG | - | chr2_2:48084002-48084021 | Msa0254540:intron | 30.0% | |
| !! | AACATTCTCTAAAGCTATTC+AGG | + | chr2_2:48084044-48084063 | None:intergenic | 30.0% |
| CAACCTATTAGCTAATTCAA+TGG | - | chr2_2:48084065-48084084 | Msa0254540:intron | 30.0% | |
| AAATATTACAATAGAAGGCC+GGG | + | chr2_2:48084144-48084163 | None:intergenic | 30.0% | |
| GAAATATTACAATAGAAGGC+CGG | + | chr2_2:48084145-48084164 | None:intergenic | 30.0% | |
| ! | TAAACTCCTTTTATGACGAA+TGG | - | chr2_2:48084200-48084219 | Msa0254540:intron | 30.0% |
| ! | CTCACGCAAATTAGTTTATT+TGG | + | chr2_2:48084404-48084423 | None:intergenic | 30.0% |
| !!! | GTGATTTTTTAGAAAACACG+AGG | + | chr2_2:48084441-48084460 | None:intergenic | 30.0% |
| !! | GTGTGTAAATTTTTAGAAGG+TGG | + | chr2_2:48084591-48084610 | None:intergenic | 30.0% |
| !!! | GTTTTTTCCATTTGAAAGCA+TGG | + | chr2_2:48084628-48084647 | None:intergenic | 30.0% |
| GAGAGTTAGAGAAAAAAAAC+AGG | + | chr2_2:48084693-48084712 | None:intergenic | 30.0% | |
| ! | GACAAAAACATGTTTTCTCT+TGG | + | chr2_2:48084823-48084842 | None:intergenic | 30.0% |
| ! | TTTTGTCCATAAACACACAT+CGG | - | chr2_2:48084836-48084855 | Msa0254540:CDS | 30.0% |
| GTGCATAGTGTAAATTGTAT+TGG | - | chr2_2:48084951-48084970 | Msa0254540:CDS | 30.0% | |
| TTGGATGGTAAGATGAACAA+GGG | + | chr2_2:48082751-48082770 | None:intergenic | 35.0% | |
| ATGGTAATTCTCTCATTCCA+TGG | - | chr2_2:48082834-48082853 | Msa0254540:intron | 35.0% | |
| CCACTATGAAAATAAGGATG+AGG | + | chr2_2:48082908-48082927 | None:intergenic | 35.0% | |
| !!! | CCTCATCCTTATTTTCATAG+TGG | - | chr2_2:48082905-48082924 | Msa0254540:intron | 35.0% |
| ATGGAGCCACTATGAAAATA+AGG | + | chr2_2:48082914-48082933 | None:intergenic | 35.0% | |
| ATTCAGGATCAACTATCTGA+CGG | + | chr2_2:48083081-48083100 | None:intergenic | 35.0% | |
| CGAGATACAAGATTGAATGT+CGG | + | chr2_2:48083145-48083164 | None:intergenic | 35.0% | |
| !! | TGAAAAAGCATCTTCCTTGA+AGG | + | chr2_2:48083179-48083198 | None:intergenic | 35.0% |
| !!! | TTCAAGGAAGATGCTTTTTC+AGG | - | chr2_2:48083178-48083197 | Msa0254540:intron | 35.0% |
| CATTTGGAAGCAACACATTT+GGG | - | chr2_2:48083317-48083336 | Msa0254540:intron | 35.0% | |
| CATCTGCTACAAATTCTTCA+TGG | + | chr2_2:48083372-48083391 | None:intergenic | 35.0% | |
| ATTGACAAAGACATGAACAC+GGG | + | chr2_2:48083568-48083587 | None:intergenic | 35.0% | |
| CATTGACAAAGACATGAACA+CGG | + | chr2_2:48083569-48083588 | None:intergenic | 35.0% | |
| ! | AGAAATGTTTGAGGTAATGG+AGG | - | chr2_2:48083822-48083841 | Msa0254540:intron | 35.0% |
| TATACATGTTTAGTTAGGCG+TGG | - | chr2_2:48083912-48083931 | Msa0254540:intron | 35.0% | |
| !!! | AGCTATTCAGGTTTTTTCAG+TGG | + | chr2_2:48084032-48084051 | None:intergenic | 35.0% |
| TGGCCATTGAATTAGCTAAT+AGG | + | chr2_2:48084071-48084090 | None:intergenic | 35.0% | |
| ! | TCCTTTTATGACGAATGGTT+CGG | - | chr2_2:48084205-48084224 | Msa0254540:intron | 35.0% |
| ! | GAAGAACCAAGTTTGATTTC+TGG | - | chr2_2:48084227-48084246 | Msa0254540:intron | 35.0% |
| TAGTCACCAGAAATCAAACT+TGG | + | chr2_2:48084236-48084255 | None:intergenic | 35.0% | |
| ! | CTAGCAATTTGAAGTTCGAT+CGG | + | chr2_2:48084301-48084320 | None:intergenic | 35.0% |
| TTTAGAAAACACGAGGGATT+GGG | + | chr2_2:48084434-48084453 | None:intergenic | 35.0% | |
| !! | TTTTAGAAAACACGAGGGAT+TGG | + | chr2_2:48084435-48084454 | None:intergenic | 35.0% |
| !! | TTGGATGCATCTTTTAGCTA+TGG | - | chr2_2:48084531-48084550 | Msa0254540:CDS | 35.0% |
| TTCTGAACCATGCTTTCAAA+TGG | - | chr2_2:48084618-48084637 | Msa0254540:CDS | 35.0% | |
| CAAATGGAAAAAACAGCTTG+TGG | - | chr2_2:48084634-48084653 | Msa0254540:CDS | 35.0% | |
| GTAGGGATTGTTTACCTTTA+GGG | - | chr2_2:48084656-48084675 | Msa0254540:CDS | 35.0% | |
| ! | TGGTGATTTTAGGCAGAAAA+AGG | + | chr2_2:48084781-48084800 | None:intergenic | 35.0% |
| TTCTGCCTAAAATCACCAAA+AGG | - | chr2_2:48084783-48084802 | Msa0254540:CDS | 35.0% | |
| TTGGATGGTAAGATGAACAA+GGG | + | chr2_2:48082751-48082770 | None:intergenic | 35.0% | |
| ATGGTAATTCTCTCATTCCA+TGG | - | chr2_2:48082834-48082853 | Msa0254540:intron | 35.0% | |
| CCACTATGAAAATAAGGATG+AGG | + | chr2_2:48082908-48082927 | None:intergenic | 35.0% | |
| !!! | CCTCATCCTTATTTTCATAG+TGG | - | chr2_2:48082905-48082924 | Msa0254540:intron | 35.0% |
| ATGGAGCCACTATGAAAATA+AGG | + | chr2_2:48082914-48082933 | None:intergenic | 35.0% | |
| ATTCAGGATCAACTATCTGA+CGG | + | chr2_2:48083081-48083100 | None:intergenic | 35.0% | |
| CGAGATACAAGATTGAATGT+CGG | + | chr2_2:48083145-48083164 | None:intergenic | 35.0% | |
| !! | TGAAAAAGCATCTTCCTTGA+AGG | + | chr2_2:48083179-48083198 | None:intergenic | 35.0% |
| !!! | TTCAAGGAAGATGCTTTTTC+AGG | - | chr2_2:48083178-48083197 | Msa0254540:intron | 35.0% |
| CATTTGGAAGCAACACATTT+GGG | - | chr2_2:48083317-48083336 | Msa0254540:intron | 35.0% | |
| CATCTGCTACAAATTCTTCA+TGG | + | chr2_2:48083372-48083391 | None:intergenic | 35.0% | |
| ATTGACAAAGACATGAACAC+GGG | + | chr2_2:48083568-48083587 | None:intergenic | 35.0% | |
| CATTGACAAAGACATGAACA+CGG | + | chr2_2:48083569-48083588 | None:intergenic | 35.0% | |
| ! | AGAAATGTTTGAGGTAATGG+AGG | - | chr2_2:48083822-48083841 | Msa0254540:intron | 35.0% |
| TATACATGTTTAGTTAGGCG+TGG | - | chr2_2:48083912-48083931 | Msa0254540:intron | 35.0% | |
| !!! | AGCTATTCAGGTTTTTTCAG+TGG | + | chr2_2:48084032-48084051 | None:intergenic | 35.0% |
| TGGCCATTGAATTAGCTAAT+AGG | + | chr2_2:48084071-48084090 | None:intergenic | 35.0% | |
| ! | TCCTTTTATGACGAATGGTT+CGG | - | chr2_2:48084205-48084224 | Msa0254540:intron | 35.0% |
| ! | GAAGAACCAAGTTTGATTTC+TGG | - | chr2_2:48084227-48084246 | Msa0254540:intron | 35.0% |
| TAGTCACCAGAAATCAAACT+TGG | + | chr2_2:48084236-48084255 | None:intergenic | 35.0% | |
| ! | CTAGCAATTTGAAGTTCGAT+CGG | + | chr2_2:48084301-48084320 | None:intergenic | 35.0% |
| TTTAGAAAACACGAGGGATT+GGG | + | chr2_2:48084434-48084453 | None:intergenic | 35.0% | |
| !! | TTTTAGAAAACACGAGGGAT+TGG | + | chr2_2:48084435-48084454 | None:intergenic | 35.0% |
| !! | TTGGATGCATCTTTTAGCTA+TGG | - | chr2_2:48084531-48084550 | Msa0254540:CDS | 35.0% |
| TTCTGAACCATGCTTTCAAA+TGG | - | chr2_2:48084618-48084637 | Msa0254540:CDS | 35.0% | |
| CAAATGGAAAAAACAGCTTG+TGG | - | chr2_2:48084634-48084653 | Msa0254540:CDS | 35.0% | |
| GTAGGGATTGTTTACCTTTA+GGG | - | chr2_2:48084656-48084675 | Msa0254540:CDS | 35.0% | |
| ! | TGGTGATTTTAGGCAGAAAA+AGG | + | chr2_2:48084781-48084800 | None:intergenic | 35.0% |
| TTCTGCCTAAAATCACCAAA+AGG | - | chr2_2:48084783-48084802 | Msa0254540:CDS | 35.0% | |
| CTTGGATGGTAAGATGAACA+AGG | + | chr2_2:48082752-48082771 | None:intergenic | 40.0% | |
| ACTTCGATGATCAATCTGCA+CGG | - | chr2_2:48082996-48083015 | Msa0254540:intron | 40.0% | |
| GTCAGATAGTTGATCCTGAA+TGG | - | chr2_2:48083080-48083099 | Msa0254540:intron | 40.0% | |
| !! | TTGATCCTGAATGGTTTGCT+GGG | - | chr2_2:48083089-48083108 | Msa0254540:intron | 40.0% |
| AGATTGAATGTCGGAGAAGT+TGG | + | chr2_2:48083136-48083155 | None:intergenic | 40.0% | |
| CATCTTCCTTGAAGGCAAAT+GGG | + | chr2_2:48083171-48083190 | None:intergenic | 40.0% | |
| GCATTTGGAAGCAACACATT+TGG | - | chr2_2:48083316-48083335 | Msa0254540:intron | 40.0% | |
| ! | ATTTGGGATTGTGAAGCCTT+GGG | - | chr2_2:48083333-48083352 | Msa0254540:intron | 40.0% |
| GATGATCTTGAACTCACACT+TGG | - | chr2_2:48083388-48083407 | Msa0254540:intron | 40.0% | |
| TAAGAAGTTCACTCAAGACC+CGG | - | chr2_2:48084123-48084142 | Msa0254540:intron | 40.0% | |
| TCTCACTCAAACCAAGTGAT+TGG | - | chr2_2:48084163-48084182 | Msa0254540:intron | 40.0% | |
| CTCACTCAAACCAAGTGATT+GGG | - | chr2_2:48084164-48084183 | Msa0254540:intron | 40.0% | |
| TCCGAACCATTCGTCATAAA+AGG | + | chr2_2:48084209-48084228 | None:intergenic | 40.0% | |
| ! | CAATTTGAAGTTCGATCGGT+GGG | + | chr2_2:48084297-48084316 | None:intergenic | 40.0% |
| CGATCGAACTTCAAATTGCT+AGG | - | chr2_2:48084299-48084318 | Msa0254540:intron | 40.0% | |
| TACTGTTAACCCGATTCCTA+GGG | + | chr2_2:48084334-48084353 | None:intergenic | 40.0% | |
| TTACTGTTAACCCGATTCCT+AGG | + | chr2_2:48084335-48084354 | None:intergenic | 40.0% | |
| TGGAAAAAACAGCTTGTGGT+AGG | - | chr2_2:48084638-48084657 | Msa0254540:CDS | 40.0% | |
| GGAAAAAACAGCTTGTGGTA+GGG | - | chr2_2:48084639-48084658 | Msa0254540:CDS | 40.0% | |
| GGTAGGGATTGTTTACCTTT+AGG | - | chr2_2:48084655-48084674 | Msa0254540:CDS | 40.0% | |
| ! | GGATTGTTTACCTTTAGGGA+GGG | - | chr2_2:48084660-48084679 | Msa0254540:CDS | 40.0% |
| !! | CTCTGCCTTTTGGTGATTTT+AGG | + | chr2_2:48084791-48084810 | None:intergenic | 40.0% |
| ! | GATATAGACTCTCTGCCTTT+TGG | + | chr2_2:48084801-48084820 | None:intergenic | 40.0% |
| ! | GTTGTACCGATGTGTGTTTA+TGG | + | chr2_2:48084845-48084864 | None:intergenic | 40.0% |
| AACCGTTATTTGTACTGCCA+AGG | - | chr2_2:48084870-48084889 | Msa0254540:CDS | 40.0% | |
| CTCCTTGGCAGTACAAATAA+CGG | + | chr2_2:48084875-48084894 | None:intergenic | 40.0% | |
| CTTGGATGGTAAGATGAACA+AGG | + | chr2_2:48082752-48082771 | None:intergenic | 40.0% | |
| ACTTCGATGATCAATCTGCA+CGG | - | chr2_2:48082996-48083015 | Msa0254540:intron | 40.0% | |
| GTCAGATAGTTGATCCTGAA+TGG | - | chr2_2:48083080-48083099 | Msa0254540:intron | 40.0% | |
| !! | TTGATCCTGAATGGTTTGCT+GGG | - | chr2_2:48083089-48083108 | Msa0254540:intron | 40.0% |
| AGATTGAATGTCGGAGAAGT+TGG | + | chr2_2:48083136-48083155 | None:intergenic | 40.0% | |
| CATCTTCCTTGAAGGCAAAT+GGG | + | chr2_2:48083171-48083190 | None:intergenic | 40.0% | |
| GCATTTGGAAGCAACACATT+TGG | - | chr2_2:48083316-48083335 | Msa0254540:intron | 40.0% | |
| ! | ATTTGGGATTGTGAAGCCTT+GGG | - | chr2_2:48083333-48083352 | Msa0254540:intron | 40.0% |
| GATGATCTTGAACTCACACT+TGG | - | chr2_2:48083388-48083407 | Msa0254540:intron | 40.0% | |
| TAAGAAGTTCACTCAAGACC+CGG | - | chr2_2:48084123-48084142 | Msa0254540:intron | 40.0% | |
| TCTCACTCAAACCAAGTGAT+TGG | - | chr2_2:48084163-48084182 | Msa0254540:intron | 40.0% | |
| CTCACTCAAACCAAGTGATT+GGG | - | chr2_2:48084164-48084183 | Msa0254540:intron | 40.0% | |
| TCCGAACCATTCGTCATAAA+AGG | + | chr2_2:48084209-48084228 | None:intergenic | 40.0% | |
| ! | CAATTTGAAGTTCGATCGGT+GGG | + | chr2_2:48084297-48084316 | None:intergenic | 40.0% |
| CGATCGAACTTCAAATTGCT+AGG | - | chr2_2:48084299-48084318 | Msa0254540:intron | 40.0% | |
| TACTGTTAACCCGATTCCTA+GGG | + | chr2_2:48084334-48084353 | None:intergenic | 40.0% | |
| TTACTGTTAACCCGATTCCT+AGG | + | chr2_2:48084335-48084354 | None:intergenic | 40.0% | |
| TGGAAAAAACAGCTTGTGGT+AGG | - | chr2_2:48084638-48084657 | Msa0254540:CDS | 40.0% | |
| GGAAAAAACAGCTTGTGGTA+GGG | - | chr2_2:48084639-48084658 | Msa0254540:CDS | 40.0% | |
| GGTAGGGATTGTTTACCTTT+AGG | - | chr2_2:48084655-48084674 | Msa0254540:CDS | 40.0% | |
| ! | GGATTGTTTACCTTTAGGGA+GGG | - | chr2_2:48084660-48084679 | Msa0254540:CDS | 40.0% |
| !! | CTCTGCCTTTTGGTGATTTT+AGG | + | chr2_2:48084791-48084810 | None:intergenic | 40.0% |
| ! | GATATAGACTCTCTGCCTTT+TGG | + | chr2_2:48084801-48084820 | None:intergenic | 40.0% |
| ! | GTTGTACCGATGTGTGTTTA+TGG | + | chr2_2:48084845-48084864 | None:intergenic | 40.0% |
| AACCGTTATTTGTACTGCCA+AGG | - | chr2_2:48084870-48084889 | Msa0254540:CDS | 40.0% | |
| CTCCTTGGCAGTACAAATAA+CGG | + | chr2_2:48084875-48084894 | None:intergenic | 40.0% | |
| !! | AAGGGGATGATGATGGACTT+GGG | + | chr2_2:48082793-48082812 | None:intergenic | 45.0% |
| !! | TAAGGGGATGATGATGGACT+TGG | + | chr2_2:48082794-48082813 | None:intergenic | 45.0% |
| GTTACGATTTGCAGCGTAAG+GGG | + | chr2_2:48082810-48082829 | None:intergenic | 45.0% | |
| CGTTACGATTTGCAGCGTAA+GGG | + | chr2_2:48082811-48082830 | None:intergenic | 45.0% | |
| TGATCCTGAAGATGAAGCTG+TGG | + | chr2_2:48082873-48082892 | None:intergenic | 45.0% | |
| TCGAAGTCAGCATTCAATCG+CGG | + | chr2_2:48082983-48083002 | None:intergenic | 45.0% | |
| ! | GTTGATCCTGAATGGTTTGC+TGG | - | chr2_2:48083088-48083107 | Msa0254540:intron | 45.0% |
| TTGATCCCAGCAAACCATTC+AGG | + | chr2_2:48083097-48083116 | None:intergenic | 45.0% | |
| GCATCTTCCTTGAAGGCAAA+TGG | + | chr2_2:48083172-48083191 | None:intergenic | 45.0% | |
| !!! | GAAGATGCTTTTTCAGGCAG+CGG | - | chr2_2:48083184-48083203 | Msa0254540:intron | 45.0% |
| ! | TCTGAGATGGCTTCAGACAT+TGG | + | chr2_2:48083289-48083308 | None:intergenic | 45.0% |
| ! | CATTTGGGATTGTGAAGCCT+TGG | - | chr2_2:48083332-48083351 | Msa0254540:intron | 45.0% |
| ! | CACTTGGTAACTCAAAGACC+AGG | - | chr2_2:48083404-48083423 | Msa0254540:intron | 45.0% |
| GTGTCTGACATTCACTGACA+CGG | - | chr2_2:48083463-48083482 | Msa0254540:intron | 45.0% | |
| CGACACAAACATGTCGACAT+TGG | + | chr2_2:48083542-48083561 | None:intergenic | 45.0% | |
| ACTTGTGTTGCAAACCTCCT+AGG | - | chr2_2:48083689-48083708 | Msa0254540:intron | 45.0% | |
| TGTAATCGAGCTCGGTATCT+TGG | + | chr2_2:48083755-48083774 | None:intergenic | 45.0% | |
| !! | TTTGAGGTAATGGAGGTGAG+TGG | - | chr2_2:48083829-48083848 | Msa0254540:intron | 45.0% |
| ! | GCAATTTGAAGTTCGATCGG+TGG | + | chr2_2:48084298-48084317 | None:intergenic | 45.0% |
| ACTGTTAACCCGATTCCTAG+GGG | + | chr2_2:48084333-48084352 | None:intergenic | 45.0% | |
| ! | GGGATTGTTTACCTTTAGGG+AGG | - | chr2_2:48084659-48084678 | Msa0254540:CDS | 45.0% |
| CGTTATTTGTACTGCCAAGG+AGG | - | chr2_2:48084873-48084892 | Msa0254540:CDS | 45.0% | |
| !! | AAGGGGATGATGATGGACTT+GGG | + | chr2_2:48082793-48082812 | None:intergenic | 45.0% |
| !! | TAAGGGGATGATGATGGACT+TGG | + | chr2_2:48082794-48082813 | None:intergenic | 45.0% |
| GTTACGATTTGCAGCGTAAG+GGG | + | chr2_2:48082810-48082829 | None:intergenic | 45.0% | |
| CGTTACGATTTGCAGCGTAA+GGG | + | chr2_2:48082811-48082830 | None:intergenic | 45.0% | |
| TGATCCTGAAGATGAAGCTG+TGG | + | chr2_2:48082873-48082892 | None:intergenic | 45.0% | |
| TCGAAGTCAGCATTCAATCG+CGG | + | chr2_2:48082983-48083002 | None:intergenic | 45.0% | |
| ! | GTTGATCCTGAATGGTTTGC+TGG | - | chr2_2:48083088-48083107 | Msa0254540:intron | 45.0% |
| TTGATCCCAGCAAACCATTC+AGG | + | chr2_2:48083097-48083116 | None:intergenic | 45.0% | |
| GCATCTTCCTTGAAGGCAAA+TGG | + | chr2_2:48083172-48083191 | None:intergenic | 45.0% | |
| !!! | GAAGATGCTTTTTCAGGCAG+CGG | - | chr2_2:48083184-48083203 | Msa0254540:intron | 45.0% |
| ! | TCTGAGATGGCTTCAGACAT+TGG | + | chr2_2:48083289-48083308 | None:intergenic | 45.0% |
| ! | CATTTGGGATTGTGAAGCCT+TGG | - | chr2_2:48083332-48083351 | Msa0254540:intron | 45.0% |
| ! | CACTTGGTAACTCAAAGACC+AGG | - | chr2_2:48083404-48083423 | Msa0254540:intron | 45.0% |
| GTGTCTGACATTCACTGACA+CGG | - | chr2_2:48083463-48083482 | Msa0254540:intron | 45.0% | |
| CGACACAAACATGTCGACAT+TGG | + | chr2_2:48083542-48083561 | None:intergenic | 45.0% | |
| ACTTGTGTTGCAAACCTCCT+AGG | - | chr2_2:48083689-48083708 | Msa0254540:intron | 45.0% | |
| TGTAATCGAGCTCGGTATCT+TGG | + | chr2_2:48083755-48083774 | None:intergenic | 45.0% | |
| !! | TTTGAGGTAATGGAGGTGAG+TGG | - | chr2_2:48083829-48083848 | Msa0254540:intron | 45.0% |
| ! | GCAATTTGAAGTTCGATCGG+TGG | + | chr2_2:48084298-48084317 | None:intergenic | 45.0% |
| ACTGTTAACCCGATTCCTAG+GGG | + | chr2_2:48084333-48084352 | None:intergenic | 45.0% | |
| ! | GGGATTGTTTACCTTTAGGG+AGG | - | chr2_2:48084659-48084678 | Msa0254540:CDS | 45.0% |
| CGTTATTTGTACTGCCAAGG+AGG | - | chr2_2:48084873-48084892 | Msa0254540:CDS | 45.0% | |
| TCATCTTACCATCCAAGCCC+CGG | - | chr2_2:48082755-48082774 | Msa0254540:intron | 50.0% | |
| !! | GGATGATGATGGACTTGGGA+AGG | + | chr2_2:48082789-48082808 | None:intergenic | 50.0% |
| GCGTTACGATTTGCAGCGTA+AGG | + | chr2_2:48082812-48082831 | None:intergenic | 50.0% | |
| GCTGCAAATCGTAACGCTGA+TGG | - | chr2_2:48082815-48082834 | Msa0254540:intron | 50.0% | |
| !! | GTGGAGAGGTTTTTGAGCCA+TGG | + | chr2_2:48082854-48082873 | None:intergenic | 50.0% |
| CTGAAGATGAAGCTGTGGAG+AGG | + | chr2_2:48082868-48082887 | None:intergenic | 50.0% | |
| CTCTCCACAGCTTCATCTTC+AGG | - | chr2_2:48082866-48082885 | Msa0254540:intron | 50.0% | |
| AATCGCGGTGTTCTAGCAGT+CGG | + | chr2_2:48082968-48082987 | None:intergenic | 50.0% | |
| TAATGTTGTCCAGTCCACCC+GGG | + | chr2_2:48083022-48083041 | None:intergenic | 50.0% | |
| GTAATGTTGTCCAGTCCACC+CGG | + | chr2_2:48083023-48083042 | None:intergenic | 50.0% | |
| TACTCCTTCCTGCCTTCTTC+CGG | - | chr2_2:48083040-48083059 | Msa0254540:intron | 50.0% | |
| GATCAACTATCTGACGGCCA+GGG | + | chr2_2:48083075-48083094 | None:intergenic | 50.0% | |
| !! | GGAGAAGTTGGACTAGCATG+TGG | + | chr2_2:48083124-48083143 | None:intergenic | 50.0% |
| TCGAAGCCCATTTGCCTTCA+AGG | - | chr2_2:48083162-48083181 | Msa0254540:intron | 50.0% | |
| TGTTCTCCAGCTATTGCAGC+AGG | - | chr2_2:48083241-48083260 | Msa0254540:intron | 50.0% | |
| TCAAAGCCTGCTGCAATAGC+TGG | + | chr2_2:48083250-48083269 | None:intergenic | 50.0% | |
| TGAAGCCTTGGGAAGGAGAA+AGG | - | chr2_2:48083344-48083363 | Msa0254540:intron | 50.0% | |
| TGGATCCTTTCTCCTTCCCA+AGG | + | chr2_2:48083352-48083371 | None:intergenic | 50.0% | |
| ! | ATCACTTGCAGTGGACTCCT+AGG | + | chr2_2:48083709-48083728 | None:intergenic | 50.0% |
| AGGAGTCCACTGCAAGTGAT+CGG | - | chr2_2:48083709-48083728 | Msa0254540:intron | 50.0% | |
| ! | TACGTACCGATCACTTGCAG+TGG | + | chr2_2:48083718-48083737 | None:intergenic | 50.0% |
| ATGTTTAGTTAGGCGTGGCG+TGG | - | chr2_2:48083917-48083936 | Msa0254540:intron | 50.0% | |
| GACTCCTTTCCCCTAGGAAT+CGG | - | chr2_2:48084321-48084340 | Msa0254540:intron | 50.0% | |
| ACTCCTTTCCCCTAGGAATC+GGG | - | chr2_2:48084322-48084341 | Msa0254540:intron | 50.0% | |
| TAACCCGATTCCTAGGGGAA+AGG | + | chr2_2:48084328-48084347 | None:intergenic | 50.0% | |
| AGGTGCATTTCCCTCCCTAA+AGG | + | chr2_2:48084673-48084692 | None:intergenic | 50.0% | |
| ! | ACCCAACTTGTTTCGACCCA+GGG | + | chr2_2:48084899-48084918 | None:intergenic | 50.0% |
| TCATCTTACCATCCAAGCCC+CGG | - | chr2_2:48082755-48082774 | Msa0254540:intron | 50.0% | |
| !! | GGATGATGATGGACTTGGGA+AGG | + | chr2_2:48082789-48082808 | None:intergenic | 50.0% |
| GCGTTACGATTTGCAGCGTA+AGG | + | chr2_2:48082812-48082831 | None:intergenic | 50.0% | |
| GCTGCAAATCGTAACGCTGA+TGG | - | chr2_2:48082815-48082834 | Msa0254540:intron | 50.0% | |
| !! | GTGGAGAGGTTTTTGAGCCA+TGG | + | chr2_2:48082854-48082873 | None:intergenic | 50.0% |
| CTGAAGATGAAGCTGTGGAG+AGG | + | chr2_2:48082868-48082887 | None:intergenic | 50.0% | |
| CTCTCCACAGCTTCATCTTC+AGG | - | chr2_2:48082866-48082885 | Msa0254540:intron | 50.0% | |
| AATCGCGGTGTTCTAGCAGT+CGG | + | chr2_2:48082968-48082987 | None:intergenic | 50.0% | |
| TAATGTTGTCCAGTCCACCC+GGG | + | chr2_2:48083022-48083041 | None:intergenic | 50.0% | |
| GTAATGTTGTCCAGTCCACC+CGG | + | chr2_2:48083023-48083042 | None:intergenic | 50.0% | |
| TACTCCTTCCTGCCTTCTTC+CGG | - | chr2_2:48083040-48083059 | Msa0254540:intron | 50.0% | |
| GATCAACTATCTGACGGCCA+GGG | + | chr2_2:48083075-48083094 | None:intergenic | 50.0% | |
| !! | GGAGAAGTTGGACTAGCATG+TGG | + | chr2_2:48083124-48083143 | None:intergenic | 50.0% |
| TCGAAGCCCATTTGCCTTCA+AGG | - | chr2_2:48083162-48083181 | Msa0254540:intron | 50.0% | |
| TGTTCTCCAGCTATTGCAGC+AGG | - | chr2_2:48083241-48083260 | Msa0254540:intron | 50.0% | |
| TCAAAGCCTGCTGCAATAGC+TGG | + | chr2_2:48083250-48083269 | None:intergenic | 50.0% | |
| TGAAGCCTTGGGAAGGAGAA+AGG | - | chr2_2:48083344-48083363 | Msa0254540:intron | 50.0% | |
| TGGATCCTTTCTCCTTCCCA+AGG | + | chr2_2:48083352-48083371 | None:intergenic | 50.0% | |
| ! | ATCACTTGCAGTGGACTCCT+AGG | + | chr2_2:48083709-48083728 | None:intergenic | 50.0% |
| AGGAGTCCACTGCAAGTGAT+CGG | - | chr2_2:48083709-48083728 | Msa0254540:intron | 50.0% | |
| ! | TACGTACCGATCACTTGCAG+TGG | + | chr2_2:48083718-48083737 | None:intergenic | 50.0% |
| ATGTTTAGTTAGGCGTGGCG+TGG | - | chr2_2:48083917-48083936 | Msa0254540:intron | 50.0% | |
| GACTCCTTTCCCCTAGGAAT+CGG | - | chr2_2:48084321-48084340 | Msa0254540:intron | 50.0% | |
| ACTCCTTTCCCCTAGGAATC+GGG | - | chr2_2:48084322-48084341 | Msa0254540:intron | 50.0% | |
| TAACCCGATTCCTAGGGGAA+AGG | + | chr2_2:48084328-48084347 | None:intergenic | 50.0% | |
| AGGTGCATTTCCCTCCCTAA+AGG | + | chr2_2:48084673-48084692 | None:intergenic | 50.0% | |
| ! | ACCCAACTTGTTTCGACCCA+GGG | + | chr2_2:48084899-48084918 | None:intergenic | 50.0% |
| ACTTGGGAAGGAAGACGAGC+CGG | + | chr2_2:48082777-48082796 | None:intergenic | 55.0% | |
| GCAGCGTAAGGGGATGATGA+TGG | + | chr2_2:48082800-48082819 | None:intergenic | 55.0% | |
| !! | AGGTGTGACAGGAGCACTGA+TGG | + | chr2_2:48082933-48082952 | None:intergenic | 55.0% |
| TCTAGCAGTCGGAGAGCTCA+GGG | + | chr2_2:48082957-48082976 | None:intergenic | 55.0% | |
| TTCTAGCAGTCGGAGAGCTC+AGG | + | chr2_2:48082958-48082977 | None:intergenic | 55.0% | |
| GATGATCAATCTGCACGGCC+CGG | - | chr2_2:48083001-48083020 | Msa0254540:intron | 55.0% | |
| ATGATCAATCTGCACGGCCC+GGG | - | chr2_2:48083002-48083021 | Msa0254540:intron | 55.0% | |
| GGATCAACTATCTGACGGCC+AGG | + | chr2_2:48083076-48083095 | None:intergenic | 55.0% | |
| AACATGCCCCTGACTGTCCA+GGG | + | chr2_2:48083225-48083244 | None:intergenic | 55.0% | |
| GGGATTGTGAAGCCTTGGGA+AGG | - | chr2_2:48083337-48083356 | Msa0254540:intron | 55.0% | |
| ! | ACTTGCAGTGGACTCCTAGG+AGG | + | chr2_2:48083706-48083725 | None:intergenic | 55.0% |
| ACCAAGTGATTGGGCGCATG+AGG | - | chr2_2:48084173-48084192 | Msa0254540:intron | 55.0% | |
| ACCTCATGCGCCCAATCACT+TGG | + | chr2_2:48084177-48084196 | None:intergenic | 55.0% | |
| TGCTAGGACTCCTTTCCCCT+AGG | - | chr2_2:48084315-48084334 | Msa0254540:intron | 55.0% | |
| CACAGATGCGTCTGTTGCAG+CGG | - | chr2_2:48084458-48084477 | Msa0254540:CDS | 55.0% | |
| ACAGATGCGTCTGTTGCAGC+GGG | - | chr2_2:48084459-48084478 | Msa0254540:CDS | 55.0% | |
| GCCCTGGGTCGAAACAAGTT+GGG | - | chr2_2:48084895-48084914 | Msa0254540:CDS | 55.0% | |
| ! | GACCCAACTTGTTTCGACCC+AGG | + | chr2_2:48084900-48084919 | None:intergenic | 55.0% |
| ACTTGGGAAGGAAGACGAGC+CGG | + | chr2_2:48082777-48082796 | None:intergenic | 55.0% | |
| GCAGCGTAAGGGGATGATGA+TGG | + | chr2_2:48082800-48082819 | None:intergenic | 55.0% | |
| !! | AGGTGTGACAGGAGCACTGA+TGG | + | chr2_2:48082933-48082952 | None:intergenic | 55.0% |
| TCTAGCAGTCGGAGAGCTCA+GGG | + | chr2_2:48082957-48082976 | None:intergenic | 55.0% | |
| TTCTAGCAGTCGGAGAGCTC+AGG | + | chr2_2:48082958-48082977 | None:intergenic | 55.0% | |
| GATGATCAATCTGCACGGCC+CGG | - | chr2_2:48083001-48083020 | Msa0254540:intron | 55.0% | |
| ATGATCAATCTGCACGGCCC+GGG | - | chr2_2:48083002-48083021 | Msa0254540:intron | 55.0% | |
| GGATCAACTATCTGACGGCC+AGG | + | chr2_2:48083076-48083095 | None:intergenic | 55.0% | |
| AACATGCCCCTGACTGTCCA+GGG | + | chr2_2:48083225-48083244 | None:intergenic | 55.0% | |
| GGGATTGTGAAGCCTTGGGA+AGG | - | chr2_2:48083337-48083356 | Msa0254540:intron | 55.0% | |
| ! | ACTTGCAGTGGACTCCTAGG+AGG | + | chr2_2:48083706-48083725 | None:intergenic | 55.0% |
| ACCAAGTGATTGGGCGCATG+AGG | - | chr2_2:48084173-48084192 | Msa0254540:intron | 55.0% | |
| ACCTCATGCGCCCAATCACT+TGG | + | chr2_2:48084177-48084196 | None:intergenic | 55.0% | |
| TGCTAGGACTCCTTTCCCCT+AGG | - | chr2_2:48084315-48084334 | Msa0254540:intron | 55.0% | |
| CACAGATGCGTCTGTTGCAG+CGG | - | chr2_2:48084458-48084477 | Msa0254540:CDS | 55.0% | |
| ACAGATGCGTCTGTTGCAGC+GGG | - | chr2_2:48084459-48084478 | Msa0254540:CDS | 55.0% | |
| GCCCTGGGTCGAAACAAGTT+GGG | - | chr2_2:48084895-48084914 | Msa0254540:CDS | 55.0% | |
| ! | GACCCAACTTGTTTCGACCC+AGG | + | chr2_2:48084900-48084919 | None:intergenic | 55.0% |
| TTGGGAAGGAAGACGAGCCG+GGG | + | chr2_2:48082775-48082794 | None:intergenic | 60.0% | |
| CTTGGGAAGGAAGACGAGCC+GGG | + | chr2_2:48082776-48082795 | None:intergenic | 60.0% | |
| CTAGCAGTCGGAGAGCTCAG+GGG | + | chr2_2:48082956-48082975 | None:intergenic | 60.0% | |
| AGGACCGGAAGAAGGCAGGA+AGG | + | chr2_2:48083047-48083066 | None:intergenic | 60.0% | |
| TTGGAGGACCGGAAGAAGGC+AGG | + | chr2_2:48083051-48083070 | None:intergenic | 60.0% | |
| ACTATCTGACGGCCAGGGCT+TGG | + | chr2_2:48083070-48083089 | None:intergenic | 60.0% | |
| ATGTGGACCCCTGGACAGTC+AGG | - | chr2_2:48083214-48083233 | Msa0254540:intron | 60.0% | |
| TGTGGACCCCTGGACAGTCA+GGG | - | chr2_2:48083215-48083234 | Msa0254540:intron | 60.0% | |
| ACATGCCCCTGACTGTCCAG+GGG | + | chr2_2:48083224-48083243 | None:intergenic | 60.0% | |
| GAACATGCCCCTGACTGTCC+AGG | + | chr2_2:48083226-48083245 | None:intergenic | 60.0% | |
| TTGTACTGCCAAGGAGGCCC+TGG | - | chr2_2:48084879-48084898 | Msa0254540:CDS | 60.0% | |
| TGTACTGCCAAGGAGGCCCT+GGG | - | chr2_2:48084880-48084899 | Msa0254540:CDS | 60.0% | |
| GGCCCTGGGTCGAAACAAGT+TGG | - | chr2_2:48084894-48084913 | Msa0254540:CDS | 60.0% | |
| TTGGGAAGGAAGACGAGCCG+GGG | + | chr2_2:48082775-48082794 | None:intergenic | 60.0% | |
| CTTGGGAAGGAAGACGAGCC+GGG | + | chr2_2:48082776-48082795 | None:intergenic | 60.0% | |
| CTAGCAGTCGGAGAGCTCAG+GGG | + | chr2_2:48082956-48082975 | None:intergenic | 60.0% | |
| AGGACCGGAAGAAGGCAGGA+AGG | + | chr2_2:48083047-48083066 | None:intergenic | 60.0% | |
| TTGGAGGACCGGAAGAAGGC+AGG | + | chr2_2:48083051-48083070 | None:intergenic | 60.0% | |
| ACTATCTGACGGCCAGGGCT+TGG | + | chr2_2:48083070-48083089 | None:intergenic | 60.0% | |
| ATGTGGACCCCTGGACAGTC+AGG | - | chr2_2:48083214-48083233 | Msa0254540:intron | 60.0% | |
| TGTGGACCCCTGGACAGTCA+GGG | - | chr2_2:48083215-48083234 | Msa0254540:intron | 60.0% | |
| ACATGCCCCTGACTGTCCAG+GGG | + | chr2_2:48083224-48083243 | None:intergenic | 60.0% | |
| GAACATGCCCCTGACTGTCC+AGG | + | chr2_2:48083226-48083245 | None:intergenic | 60.0% | |
| TTGTACTGCCAAGGAGGCCC+TGG | - | chr2_2:48084879-48084898 | Msa0254540:CDS | 60.0% | |
| TGTACTGCCAAGGAGGCCCT+GGG | - | chr2_2:48084880-48084899 | Msa0254540:CDS | 60.0% | |
| GGCCCTGGGTCGAAACAAGT+TGG | - | chr2_2:48084894-48084913 | Msa0254540:CDS | 60.0% | |
| AAGACGAGCCGGGGCTTGGA+TGG | + | chr2_2:48082766-48082785 | None:intergenic | 65.0% | |
| AAGGAAGACGAGCCGGGGCT+TGG | + | chr2_2:48082770-48082789 | None:intergenic | 65.0% | |
| ! | GAGCTCAGGGGAGGTGTGAC+AGG | + | chr2_2:48082944-48082963 | None:intergenic | 65.0% |
| ATCAATCTGCACGGCCCGGG+TGG | - | chr2_2:48083005-48083024 | Msa0254540:intron | 65.0% | |
| GGGCTTGGAGGACCGGAAGA+AGG | + | chr2_2:48083055-48083074 | None:intergenic | 65.0% | |
| TCTTCCGGTCCTCCAAGCCC+TGG | - | chr2_2:48083055-48083074 | Msa0254540:intron | 65.0% | |
| ATCTGACGGCCAGGGCTTGG+AGG | + | chr2_2:48083067-48083086 | None:intergenic | 65.0% | |
| GTGGACCCCTGGACAGTCAG+GGG | - | chr2_2:48083216-48083235 | Msa0254540:intron | 65.0% | |
| GTTTCGACCCAGGGCCTCCT+TGG | + | chr2_2:48084890-48084909 | None:intergenic | 65.0% | |
| AAGACGAGCCGGGGCTTGGA+TGG | + | chr2_2:48082766-48082785 | None:intergenic | 65.0% | |
| AAGGAAGACGAGCCGGGGCT+TGG | + | chr2_2:48082770-48082789 | None:intergenic | 65.0% | |
| ! | GAGCTCAGGGGAGGTGTGAC+AGG | + | chr2_2:48082944-48082963 | None:intergenic | 65.0% |
| ATCAATCTGCACGGCCCGGG+TGG | - | chr2_2:48083005-48083024 | Msa0254540:intron | 65.0% | |
| GGGCTTGGAGGACCGGAAGA+AGG | + | chr2_2:48083055-48083074 | None:intergenic | 65.0% | |
| TCTTCCGGTCCTCCAAGCCC+TGG | - | chr2_2:48083055-48083074 | Msa0254540:intron | 65.0% | |
| ATCTGACGGCCAGGGCTTGG+AGG | + | chr2_2:48083067-48083086 | None:intergenic | 65.0% | |
| GTGGACCCCTGGACAGTCAG+GGG | - | chr2_2:48083216-48083235 | Msa0254540:intron | 65.0% | |
| GTTTCGACCCAGGGCCTCCT+TGG | + | chr2_2:48084890-48084909 | None:intergenic | 65.0% | |
| GCAGTCGGAGAGCTCAGGGG+AGG | + | chr2_2:48082953-48082972 | None:intergenic | 70.0% | |
| ACGGCCAGGGCTTGGAGGAC+CGG | + | chr2_2:48083062-48083081 | None:intergenic | 70.0% | |
| CAGGCAGCGGTTCGCGCATG+TGG | - | chr2_2:48083197-48083216 | Msa0254540:intron | 70.0% | |
| GGTTCGCGCATGTGGACCCC+TGG | - | chr2_2:48083205-48083224 | Msa0254540:intron | 70.0% | |
| GCAGTCGGAGAGCTCAGGGG+AGG | + | chr2_2:48082953-48082972 | None:intergenic | 70.0% | |
| ACGGCCAGGGCTTGGAGGAC+CGG | + | chr2_2:48083062-48083081 | None:intergenic | 70.0% | |
| CAGGCAGCGGTTCGCGCATG+TGG | - | chr2_2:48083197-48083216 | Msa0254540:intron | 70.0% | |
| GGTTCGCGCATGTGGACCCC+TGG | - | chr2_2:48083205-48083224 | Msa0254540:intron | 70.0% | |
| TCTGCACGGCCCGGGTGGAC+TGG | - | chr2_2:48083010-48083029 | Msa0254540:intron | 75.0% | |
| TCTGCACGGCCCGGGTGGAC+TGG | - | chr2_2:48083010-48083029 | Msa0254540:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 48082716 | 48085020 | 48082716 | ID=Msa0254540;Name=Msa0254540 |
| chr2_2 | mRNA | 48082716 | 48085020 | 48082716 | ID=Msa0254540-mRNA-1;Parent=Msa0254540;Name=Msa0254540-mRNA-1;_AED=0.43;_eAED=0.43;_QI=0|0|0|0.5|1|1|2|0|223 |
| chr2_2 | exon | 48084355 | 48085020 | 48084355 | ID=Msa0254540-mRNA-1:exon:14544;Parent=Msa0254540-mRNA-1 |
| chr2_2 | exon | 48082716 | 48082721 | 48082716 | ID=Msa0254540-mRNA-1:exon:14543;Parent=Msa0254540-mRNA-1 |
| chr2_2 | CDS | 48084355 | 48085020 | 48084355 | ID=Msa0254540-mRNA-1:cds;Parent=Msa0254540-mRNA-1 |
| chr2_2 | CDS | 48082716 | 48082721 | 48082716 | ID=Msa0254540-mRNA-1:cds;Parent=Msa0254540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
