Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160780 | XP_039683226.1 | 98.805 | 251 | 2 | 1 | 1 | 251 | 1 | 250 | 0.0 | 506 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160780 | sp|O80674|BH106_ARATH | 61.644 | 219 | 78 | 5 | 18 | 233 | 10 | 225 | 1.95e-79 | 242 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160780 | A0A396H4N2 | 98.805 | 251 | 2 | 1 | 1 | 251 | 1 | 250 | 0.0 | 506 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1160780 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005390 | Msa1160780 | 0.816497 | 5.363526e-52 | -8.615850e-47 |
| Msa0006840 | Msa1160780 | 0.815199 | 1.044783e-51 | -8.615850e-47 |
| Msa0043990 | Msa1160780 | 0.809055 | 2.286385e-50 | -8.615850e-47 |
| Msa0045620 | Msa1160780 | 0.808388 | 3.174348e-50 | -8.615850e-47 |
| Msa0053850 | Msa1160780 | 0.827152 | 1.831403e-54 | -8.615850e-47 |
| Msa0058230 | Msa1160780 | 0.805838 | 1.100251e-49 | -8.615850e-47 |
| Msa0058370 | Msa1160780 | 0.808512 | 2.986782e-50 | -8.615850e-47 |
| Msa0069350 | Msa1160780 | 0.838337 | 3.053798e-57 | -8.615850e-47 |
| Msa0084990 | Msa1160780 | 0.823052 | 1.704348e-53 | -8.615850e-47 |
| Msa0086250 | Msa1160780 | 0.804736 | 1.872108e-49 | -8.615850e-47 |
| Msa0109730 | Msa1160780 | 0.825472 | 4.602080e-54 | -8.615850e-47 |
| Msa0612520 | Msa1160780 | 0.848660 | 5.321743e-60 | -8.615850e-47 |
| Msa0614980 | Msa1160780 | -0.850139 | 2.059204e-60 | -8.615850e-47 |
| Msa0650640 | Msa1160780 | -0.808279 | 3.348916e-50 | -8.615850e-47 |
| Msa0653160 | Msa1160780 | 0.868247 | 7.526439e-66 | -8.615850e-47 |
| Msa0655710 | Msa1160780 | 0.805393 | 1.364112e-49 | -8.615850e-47 |
| Msa0660260 | Msa1160780 | 0.810585 | 1.071465e-50 | -8.615850e-47 |
| Msa0663290 | Msa1160780 | 0.819718 | 1.002718e-52 | -8.615850e-47 |
| Msa0664070 | Msa1160780 | 0.809753 | 1.619132e-50 | -8.615850e-47 |
| Msa0688620 | Msa1160780 | 0.844229 | 8.605956e-59 | -8.615850e-47 |
| Msa0690320 | Msa1160780 | 0.825006 | 5.931186e-54 | -8.615850e-47 |
| Msa0695560 | Msa1160780 | 0.843389 | 1.444322e-58 | -8.615850e-47 |
| Msa0701250 | Msa1160780 | 0.803307 | 3.710887e-49 | -8.615850e-47 |
| Msa0708020 | Msa1160780 | 0.802172 | 6.362714e-49 | -8.615850e-47 |
| Msa0715510 | Msa1160780 | 0.814553 | 1.453131e-51 | -8.615850e-47 |
| Msa0749190 | Msa1160780 | 0.845713 | 3.420626e-59 | -8.615850e-47 |
| Msa0750520 | Msa1160780 | 0.848726 | 5.101039e-60 | -8.615850e-47 |
| Msa0831820 | Msa1160780 | 0.801723 | 7.870947e-49 | -8.615850e-47 |
| Msa0134830 | Msa1160780 | 0.836569 | 8.666884e-57 | -8.615850e-47 |
| Msa0134930 | Msa1160780 | 0.866148 | 3.523327e-65 | -8.615850e-47 |
| Msa0150590 | Msa1160780 | 0.815762 | 7.827474e-52 | -8.615850e-47 |
| Msa0177830 | Msa1160780 | 0.823380 | 1.428775e-53 | -8.615850e-47 |
| Msa0177970 | Msa1160780 | 0.825807 | 3.831780e-54 | -8.615850e-47 |
| Msa0179670 | Msa1160780 | 0.829690 | 4.470892e-55 | -8.615850e-47 |
| Msa0184700 | Msa1160780 | 0.800893 | 1.163719e-48 | -8.615850e-47 |
| Msa0191570 | Msa1160780 | 0.809586 | 1.758562e-50 | -8.615850e-47 |
| Msa0214210 | Msa1160780 | 0.832260 | 1.046463e-55 | -8.615850e-47 |
| Msa0225800 | Msa1160780 | 0.809253 | 2.073474e-50 | -8.615850e-47 |
| Msa0233570 | Msa1160780 | 0.851279 | 9.841307e-61 | -8.615850e-47 |
| Msa0420430 | Msa1160780 | 0.836841 | 7.385187e-57 | -8.615850e-47 |
| Msa0432690 | Msa1160780 | 0.823332 | 1.466044e-53 | -8.615850e-47 |
| Msa0439920 | Msa1160780 | 0.808785 | 2.611073e-50 | -8.615850e-47 |
| Msa0461550 | Msa1160780 | 0.818460 | 1.937458e-52 | -8.615850e-47 |
| Msa0462980 | Msa1160780 | 0.801599 | 8.346585e-49 | -8.615850e-47 |
| Msa0464050 | Msa1160780 | 0.815631 | 8.374319e-52 | -8.615850e-47 |
| Msa0999950 | Msa1160780 | 0.804276 | 2.334356e-49 | -8.615850e-47 |
| Msa1008850 | Msa1160780 | 0.818425 | 1.973290e-52 | -8.615850e-47 |
| Msa1033420 | Msa1160780 | 0.899907 | 1.244497e-77 | -8.615850e-47 |
| Msa1034960 | Msa1160780 | 0.816771 | 4.657332e-52 | -8.615850e-47 |
| Msa1046120 | Msa1160780 | 0.857313 | 1.776960e-62 | -8.615850e-47 |
| Msa1071410 | Msa1160780 | 0.846896 | 1.627902e-59 | -8.615850e-47 |
| Msa1073060 | Msa1160780 | 0.914169 | 2.627179e-84 | -8.615850e-47 |
| Msa1091050 | Msa1160780 | 0.867189 | 1.643597e-65 | -8.615850e-47 |
| Msa0239760 | Msa1160780 | 0.800666 | 1.294940e-48 | -8.615850e-47 |
| Msa0254540 | Msa1160780 | 0.859268 | 4.650930e-63 | -8.615850e-47 |
| Msa0260630 | Msa1160780 | 0.820604 | 6.281303e-53 | -8.615850e-47 |
| Msa0271500 | Msa1160780 | 0.817935 | 2.547307e-52 | -8.615850e-47 |
| Msa0293840 | Msa1160780 | 0.851975 | 6.253093e-61 | -8.615850e-47 |
| Msa0309060 | Msa1160780 | -0.813985 | 1.939931e-51 | -8.615850e-47 |
| Msa0312250 | Msa1160780 | 0.862178 | 6.091385e-64 | -8.615850e-47 |
| Msa0316720 | Msa1160780 | -0.807519 | 4.859188e-50 | -8.615850e-47 |
| Msa0318620 | Msa1160780 | 0.803286 | 3.748689e-49 | -8.615850e-47 |
| Msa0332280 | Msa1160780 | 0.867235 | 1.589687e-65 | -8.615850e-47 |
| Msa0336430 | Msa1160780 | 0.833079 | 6.552701e-56 | -8.615850e-47 |
| Msa0336520 | Msa1160780 | 0.840528 | 8.235011e-58 | -8.615850e-47 |
| Msa1130780 | Msa1160780 | 0.843540 | 1.315995e-58 | -8.615850e-47 |
| Msa1133970 | Msa1160780 | 0.870162 | 1.797685e-66 | -8.615850e-47 |
| Msa1134040 | Msa1160780 | 0.870863 | 1.057840e-66 | -8.615850e-47 |
| Msa1144990 | Msa1160780 | 0.845041 | 5.200546e-59 | -8.615850e-47 |
| Msa1154630 | Msa1160780 | 0.800612 | 1.328097e-48 | -8.615850e-47 |
| Msa1160780 | Msa1189850 | 0.803223 | 3.862924e-49 | -8.615850e-47 |
| Msa1160780 | Msa1267930 | 0.803400 | 3.549340e-49 | -8.615850e-47 |
| Msa1160780 | Msa1278030 | 0.829639 | 4.599947e-55 | -8.615850e-47 |
| Msa1160780 | Msa1341750 | 0.844838 | 5.898929e-59 | -8.615850e-47 |
| Msa1160780 | Msa1342810 | 0.806862 | 6.693063e-50 | -8.615850e-47 |
| Msa1160780 | Msa1349850 | -0.878292 | 3.160341e-69 | -8.615850e-47 |
| Msa1160780 | Msa1362590 | 0.812796 | 3.540436e-51 | -8.615850e-47 |
| Msa1160780 | Msa1363690 | 0.841461 | 4.685694e-58 | -8.615850e-47 |
| Msa1160780 | Msa1371800 | 0.811168 | 8.012025e-51 | -8.615850e-47 |
| Msa1160780 | Msa1372030 | 0.832600 | 8.619415e-56 | -8.615850e-47 |
| Msa1160780 | Msa1376310 | 0.808123 | 3.615044e-50 | -8.615850e-47 |
| Msa1160780 | Msa1377140 | 0.811716 | 6.091074e-51 | -8.615850e-47 |
| Msa1160780 | Msa1381800 | 0.845996 | 2.866109e-59 | -8.615850e-47 |
| Msa1160780 | Msa1389310 | 0.818519 | 1.878571e-52 | -8.615850e-47 |
| Msa1160780 | Msa1396550 | 0.828088 | 1.092095e-54 | -8.615850e-47 |
| Msa1160780 | Msa1417930 | 0.855877 | 4.695580e-62 | -8.615850e-47 |
| Msa1160780 | Msa1427600 | -0.800956 | 1.130092e-48 | -8.615850e-47 |
| Msa1160780 | Msa1453030 | 0.810635 | 1.045095e-50 | -8.615850e-47 |
| Msa0507810 | Msa1160780 | 0.804564 | 2.033166e-49 | -8.615850e-47 |
| Msa0507820 | Msa1160780 | 0.810617 | 1.054581e-50 | -8.615850e-47 |
| Msa0519060 | Msa1160780 | -0.812949 | 3.276335e-51 | -8.615850e-47 |
| Msa0521320 | Msa1160780 | 0.800727 | 1.258310e-48 | -8.615850e-47 |
| Msa0521940 | Msa1160780 | 0.812005 | 5.270149e-51 | -8.615850e-47 |
| Msa0536410 | Msa1160780 | 0.801733 | 7.831831e-49 | -8.615850e-47 |
| Msa0541740 | Msa1160780 | 0.805597 | 1.236190e-49 | -8.615850e-47 |
| Msa0553210 | Msa1160780 | 0.805234 | 1.473164e-49 | -8.615850e-47 |
| Msa0557850 | Msa1160780 | 0.888529 | 5.446549e-73 | -8.615850e-47 |
| Msa0564980 | Msa1160780 | 0.825434 | 4.698527e-54 | -8.615850e-47 |
| Msa0568710 | Msa1160780 | 0.834443 | 2.988989e-56 | -8.615850e-47 |
| Msa0575710 | Msa1160780 | 0.845767 | 3.306522e-59 | -8.615850e-47 |
| Msa0579360 | Msa1160780 | -0.867912 | 9.642270e-66 | -8.615850e-47 |
| Msa0929900 | Msa1160780 | 0.842447 | 2.571894e-58 | -8.615850e-47 |
| Msa0930950 | Msa1160780 | -0.884562 | 1.725090e-71 | -8.615850e-47 |
| Msa0965470 | Msa1160780 | 0.815154 | 1.069319e-51 | -8.615850e-47 |
| Msa0978980 | Msa1160780 | 0.839377 | 1.643243e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160780 | MtrunA17_Chr7g0255961 | 98.805 | 251 | 2 | 1 | 1 | 251 | 1 | 250 | 0.0 | 506 |
| Msa1160780 | MtrunA17_Chr1g0198801 | 49.738 | 191 | 89 | 3 | 59 | 243 | 141 | 330 | 4.45e-48 | 162 |
| Msa1160780 | MtrunA17_Chr3g0113721 | 40.625 | 192 | 96 | 4 | 68 | 243 | 31 | 220 | 1.70e-41 | 141 |
| Msa1160780 | MtrunA17_Chr2g0325521 | 45.810 | 179 | 90 | 3 | 71 | 243 | 54 | 231 | 1.15e-33 | 122 |
| Msa1160780 | MtrunA17_Chr4g0041051 | 42.553 | 188 | 91 | 5 | 68 | 243 | 60 | 242 | 9.72e-29 | 109 |
| Msa1160780 | MtrunA17_Chr5g0412371 | 35.096 | 208 | 114 | 5 | 32 | 233 | 7 | 199 | 3.75e-28 | 106 |
| Msa1160780 | MtrunA17_Chr5g0427361 | 38.506 | 174 | 79 | 3 | 59 | 206 | 19 | 190 | 3.20e-23 | 94.7 |
| Msa1160780 | MtrunA17_Chr4g0045901 | 38.415 | 164 | 96 | 4 | 70 | 230 | 69 | 230 | 4.45e-22 | 92.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160780 | AT2G41130.1 | 61.644 | 219 | 78 | 5 | 18 | 233 | 10 | 225 | 1.98e-80 | 242 |
| Msa1160780 | AT3G56770.1 | 61.140 | 193 | 61 | 4 | 70 | 250 | 39 | 229 | 6.55e-73 | 222 |
| Msa1160780 | AT1G68810.1 | 46.231 | 199 | 95 | 3 | 57 | 243 | 151 | 349 | 1.01e-46 | 159 |
| Msa1160780 | AT3G25710.1 | 58.571 | 140 | 56 | 1 | 72 | 211 | 128 | 265 | 2.29e-44 | 152 |
| Msa1160780 | AT2G40200.1 | 41.579 | 190 | 94 | 4 | 71 | 245 | 58 | 245 | 7.61e-35 | 125 |
| Msa1160780 | AT4G38070.1 | 34.254 | 181 | 103 | 5 | 26 | 206 | 50 | 214 | 7.70e-22 | 91.7 |
Find 67 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACTGTTATTTCGTCGGTTT+CGG | 0.235930 | 7_4:+50865207 | None:intergenic |
| TTTCGATTAGGTCGGGAATT+AGG | 0.256589 | 7_4:+50865107 | None:intergenic |
| CAACAGATTCAGAATAATAT+TGG | 0.265015 | 7_4:-50866595 | Msa1160780:CDS |
| GAAAGAGATAAGGATGAAAA+AGG | 0.278481 | 7_4:+50866630 | None:intergenic |
| ATGGTGGAGTAGTAGTAATA+AGG | 0.320333 | 7_4:+50866705 | None:intergenic |
| GAATTCACTCAGGTCTTTGT+TGG | 0.378871 | 7_4:-50864957 | Msa1160780:CDS |
| GAGACTTGAGGATTTCGATT+AGG | 0.380801 | 7_4:+50865095 | None:intergenic |
| TGGTGGAGTAGTAGTAATAA+GGG | 0.382130 | 7_4:+50866706 | None:intergenic |
| AACTACTAGTACTAATGTAT+AGG | 0.383586 | 7_4:+50864809 | None:intergenic |
| AACAGATTCAGAATAATATT+GGG | 0.426141 | 7_4:-50866594 | Msa1160780:CDS |
| ACTACTAGTACTAATGTATA+GGG | 0.427247 | 7_4:+50864810 | None:intergenic |
| TAGAAAGCTAGTGTAGGTTA+TGG | 0.430337 | 7_4:+50866686 | None:intergenic |
| TGTTGCATCATAGTGCTACT+AGG | 0.431842 | 7_4:+50866502 | None:intergenic |
| GGGGAAGGAAAGGGAGAGAG+TGG | 0.453144 | 7_4:+50866726 | None:intergenic |
| GCTGAAATGGCCACACTTGG+TGG | 0.453567 | 7_4:-50865052 | Msa1160780:CDS |
| GTCGAAAAGGCGTCGAGGGT+TGG | 0.453710 | 7_4:-50864909 | Msa1160780:CDS |
| GTTGAGTATTCAAAGAATGA+AGG | 0.456323 | 7_4:+50866526 | None:intergenic |
| CATTGGGTTAAGATAAGTTA+AGG | 0.457884 | 7_4:+50864872 | None:intergenic |
| CACTCAGGTCTTTGTTGGAT+AGG | 0.462227 | 7_4:-50864952 | Msa1160780:CDS |
| CACTGCAAATCAATCTGCAT+TGG | 0.466060 | 7_4:+50864855 | None:intergenic |
| AGGAAGCTGAGAAGAGAAGA+AGG | 0.471315 | 7_4:-50866363 | Msa1160780:CDS |
| GTAGTAATAAGGGGAAGGAA+AGG | 0.472830 | 7_4:+50866716 | None:intergenic |
| GGCAATGACATCTCCGACGA+AGG | 0.483297 | 7_4:-50865175 | Msa1160780:CDS |
| GTTATTTCGTCGGTTTCGGA+TGG | 0.483862 | 7_4:+50865211 | None:intergenic |
| GTAATTTCAGAAACTTCAAA+GGG | 0.483898 | 7_4:+50866436 | None:intergenic |
| TTGAGGATTTCGATTAGGTC+GGG | 0.493776 | 7_4:+50865100 | None:intergenic |
| AGTAATTTCAGAAACTTCAA+AGG | 0.496460 | 7_4:+50866435 | None:intergenic |
| CTTGAGGATTTCGATTAGGT+CGG | 0.504746 | 7_4:+50865099 | None:intergenic |
| TAGTAATAAGGGGAAGGAAA+GGG | 0.506583 | 7_4:+50866717 | None:intergenic |
| AAAGCTAGTGTAGGTTATGG+TGG | 0.508254 | 7_4:+50866689 | None:intergenic |
| CCTTGGAGTTGCAAGGGAGA+AGG | 0.512266 | 7_4:+50866305 | None:intergenic |
| ACTGCAAATCAATCTGCATT+GGG | 0.520969 | 7_4:+50864856 | None:intergenic |
| CTTGGAGTTGCAAGGGAGAA+GGG | 0.521866 | 7_4:+50866306 | None:intergenic |
| TTCGTCGGAGATGTCATTGC+CGG | 0.522101 | 7_4:+50865177 | None:intergenic |
| TGATAACCTTGTTACTTCCA+AGG | 0.531796 | 7_4:+50864721 | None:intergenic |
| TTGAGTATTCAAAGAATGAA+GGG | 0.546799 | 7_4:+50866527 | None:intergenic |
| AAAGCTGAAATGGCCACACT+TGG | 0.548268 | 7_4:-50865055 | Msa1160780:CDS |
| CCTTCTCCCTTGCAACTCCA+AGG | 0.549041 | 7_4:-50866305 | Msa1160780:intron |
| ATAATAACCTTGGAGTTGCA+AGG | 0.549750 | 7_4:+50866298 | None:intergenic |
| TCTTTGTTGGATAGGTCTAG+TGG | 0.556474 | 7_4:-50864944 | Msa1160780:CDS |
| AGATATGACTGTTATTTCGT+CGG | 0.558305 | 7_4:+50865201 | None:intergenic |
| GGTCTAGTGGTTGTAACGAT+AGG | 0.565435 | 7_4:-50864931 | Msa1160780:CDS |
| GAGTAGTAGTAATAAGGGGA+AGG | 0.570776 | 7_4:+50866711 | None:intergenic |
| TAATAACCTTGGAGTTGCAA+GGG | 0.573577 | 7_4:+50866299 | None:intergenic |
| ATAGAATAGAAAGCTAGTGT+AGG | 0.573634 | 7_4:+50866680 | None:intergenic |
| AAGGGAGAAGGGTACGAAGA+TGG | 0.575464 | 7_4:+50866317 | None:intergenic |
| ACGTGTTCTTCCACCAAGTG+TGG | 0.575747 | 7_4:+50865042 | None:intergenic |
| GAATATGAGTCTGCCTTCGT+CGG | 0.576237 | 7_4:+50865162 | None:intergenic |
| ATAGGTCGAAAAGGCGTCGA+GGG | 0.576982 | 7_4:-50864913 | Msa1160780:CDS |
| AGAGCTCTATCTTGCTGAGA+GGG | 0.579252 | 7_4:+50866406 | None:intergenic |
| GTTGTAACGATAGGTCGAAA+AGG | 0.580273 | 7_4:-50864922 | Msa1160780:CDS |
| GGTGGAGTAGTAGTAATAAG+GGG | 0.585789 | 7_4:+50866707 | None:intergenic |
| TTTCAGAAACTTCAAAGGGG+TGG | 0.587837 | 7_4:+50866440 | None:intergenic |
| GAAGCATTGTGAAAGAGATA+AGG | 0.591583 | 7_4:+50866620 | None:intergenic |
| GAAATAACAGTCATATCTGC+CGG | 0.595239 | 7_4:-50865196 | Msa1160780:CDS |
| GATTCAGAATAATATTGGGA+TGG | 0.603750 | 7_4:-50866590 | Msa1160780:CDS |
| GGAAGCTGAGAAGAGAAGAA+GGG | 0.604105 | 7_4:-50866362 | Msa1160780:CDS |
| GATTAGGTCGGGAATTAGGT+CGG | 0.607145 | 7_4:+50865111 | None:intergenic |
| ATAGAGCCTTGGAAGTAACA+AGG | 0.623435 | 7_4:-50864727 | Msa1160780:three_prime_UTR |
| GAAGGGTACGAAGATGGTCA+AGG | 0.633890 | 7_4:+50866323 | None:intergenic |
| AGCTGCTTTGAAGAATCACA+AGG | 0.645458 | 7_4:-50866383 | Msa1160780:CDS |
| TAGAGCTCTATCTTGCTGAG+AGG | 0.647696 | 7_4:+50866405 | None:intergenic |
| ATGAAGGGTTGTTAGCAACA+AGG | 0.651347 | 7_4:+50866542 | None:intergenic |
| GATAGGTCGAAAAGGCGTCG+AGG | 0.658588 | 7_4:-50864914 | Msa1160780:CDS |
| TGATTGATTTCAGACAGACA+AGG | 0.674472 | 7_4:-50865314 | Msa1160780:intron |
| ATGTATAGGGAATGAAAACG+TGG | 0.712817 | 7_4:+50864823 | None:intergenic |
| TAATTTCAGAAACTTCAAAG+GGG | 0.757536 | 7_4:+50866437 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTTTCTTTAATTTTTATTT+AGG | + | chr7_4:50865377-50865396 | None:intergenic | 10.0% |
| !!! | AGTTTCTTTAATTTTTATTT+AGG | + | chr7_4:50865377-50865396 | None:intergenic | 10.0% |
| !! | AACAGATTCAGAATAATATT+GGG | - | chr7_4:50864758-50864777 | Msa1160780:three_prime_UTR | 20.0% |
| !! | AATGATGAAAATAATAACCT+TGG | + | chr7_4:50865067-50865086 | None:intergenic | 20.0% |
| !! | TCATTGTTAATTATTTGTCT+TGG | - | chr7_4:50865082-50865101 | Msa1160780:CDS | 20.0% |
| !!! | ATTTTCTTTTTTGTTCTCAA+AGG | - | chr7_4:50865134-50865153 | Msa1160780:CDS | 20.0% |
| !! | GTGAAAATGAAAAAGAAAAT+AGG | - | chr7_4:50865350-50865369 | Msa1160780:intron | 20.0% |
| !!! | CTAGATCCTTAATTATTTTT+TGG | - | chr7_4:50865397-50865416 | Msa1160780:intron | 20.0% |
| !! | GATGTTCCAAAAAATAATTA+AGG | + | chr7_4:50865406-50865425 | None:intergenic | 20.0% |
| !!! | TTGGATTACATATTTTTTGT+AGG | + | chr7_4:50865555-50865574 | None:intergenic | 20.0% |
| !!! | GCTTAATTTGCAAATAATTT+TGG | + | chr7_4:50865624-50865643 | None:intergenic | 20.0% |
| !! | AATTATTTGCAAATTAAGCT+AGG | - | chr7_4:50865625-50865644 | Msa1160780:intron | 20.0% |
| !! | ATTATTTGCAAATTAAGCTA+GGG | - | chr7_4:50865626-50865645 | Msa1160780:intron | 20.0% |
| !! | AACAGATTCAGAATAATATT+GGG | - | chr7_4:50864758-50864777 | Msa1160780:three_prime_UTR | 20.0% |
| !! | AATGATGAAAATAATAACCT+TGG | + | chr7_4:50865067-50865086 | None:intergenic | 20.0% |
| !! | TCATTGTTAATTATTTGTCT+TGG | - | chr7_4:50865082-50865101 | Msa1160780:CDS | 20.0% |
| !!! | ATTTTCTTTTTTGTTCTCAA+AGG | - | chr7_4:50865134-50865153 | Msa1160780:CDS | 20.0% |
| !! | GTGAAAATGAAAAAGAAAAT+AGG | - | chr7_4:50865350-50865369 | Msa1160780:intron | 20.0% |
| !!! | CTAGATCCTTAATTATTTTT+TGG | - | chr7_4:50865397-50865416 | Msa1160780:intron | 20.0% |
| !! | GATGTTCCAAAAAATAATTA+AGG | + | chr7_4:50865406-50865425 | None:intergenic | 20.0% |
| !!! | TTGGATTACATATTTTTTGT+AGG | + | chr7_4:50865555-50865574 | None:intergenic | 20.0% |
| !!! | GCTTAATTTGCAAATAATTT+TGG | + | chr7_4:50865624-50865643 | None:intergenic | 20.0% |
| !! | AATTATTTGCAAATTAAGCT+AGG | - | chr7_4:50865625-50865644 | Msa1160780:intron | 20.0% |
| !! | ATTATTTGCAAATTAAGCTA+GGG | - | chr7_4:50865626-50865645 | Msa1160780:intron | 20.0% |
| ! | AAAGAGATAAGGATGAAAAA+GGG | + | chr7_4:50864724-50864743 | None:intergenic | 25.0% |
| ! | CAACAGATTCAGAATAATAT+TGG | - | chr7_4:50864757-50864776 | Msa1160780:three_prime_UTR | 25.0% |
| ! | TTGAGTATTCAAAGAATGAA+GGG | + | chr7_4:50864828-50864847 | None:intergenic | 25.0% |
| ! | TAATTTCAGAAACTTCAAAG+GGG | + | chr7_4:50864918-50864937 | None:intergenic | 25.0% |
| ! | GTAATTTCAGAAACTTCAAA+GGG | + | chr7_4:50864919-50864938 | None:intergenic | 25.0% |
| ! | AGTAATTTCAGAAACTTCAA+AGG | + | chr7_4:50864920-50864939 | None:intergenic | 25.0% |
| !! | ACATGTTTTCACTCTTTTTT+TGG | + | chr7_4:50865236-50865255 | None:intergenic | 25.0% |
| ! | CTTAATTACTAAAGTGAGAA+AGG | + | chr7_4:50865291-50865310 | None:intergenic | 25.0% |
| ! | TAGTCATGTATAAAACTTGA+TGG | + | chr7_4:50865715-50865734 | None:intergenic | 25.0% |
| !!! | TTGTAGGTTTTGTAAAATTG+AGG | + | chr7_4:50865834-50865853 | None:intergenic | 25.0% |
| ! | ACTACTAGTACTAATGTATA+GGG | + | chr7_4:50866545-50866564 | None:intergenic | 25.0% |
| ! | AACTACTAGTACTAATGTAT+AGG | + | chr7_4:50866546-50866565 | None:intergenic | 25.0% |
| !!! | GTGTTCAGTTATTTTGTAAT+AGG | - | chr7_4:50866573-50866592 | Msa1160780:CDS | 25.0% |
| ! | AAAGAGATAAGGATGAAAAA+GGG | + | chr7_4:50864724-50864743 | None:intergenic | 25.0% |
| ! | CAACAGATTCAGAATAATAT+TGG | - | chr7_4:50864757-50864776 | Msa1160780:three_prime_UTR | 25.0% |
| ! | TTGAGTATTCAAAGAATGAA+GGG | + | chr7_4:50864828-50864847 | None:intergenic | 25.0% |
| ! | TAATTTCAGAAACTTCAAAG+GGG | + | chr7_4:50864918-50864937 | None:intergenic | 25.0% |
| ! | GTAATTTCAGAAACTTCAAA+GGG | + | chr7_4:50864919-50864938 | None:intergenic | 25.0% |
| ! | AGTAATTTCAGAAACTTCAA+AGG | + | chr7_4:50864920-50864939 | None:intergenic | 25.0% |
| !! | ACATGTTTTCACTCTTTTTT+TGG | + | chr7_4:50865236-50865255 | None:intergenic | 25.0% |
| ! | CTTAATTACTAAAGTGAGAA+AGG | + | chr7_4:50865291-50865310 | None:intergenic | 25.0% |
| ! | TAGTCATGTATAAAACTTGA+TGG | + | chr7_4:50865715-50865734 | None:intergenic | 25.0% |
| !!! | TTGTAGGTTTTGTAAAATTG+AGG | + | chr7_4:50865834-50865853 | None:intergenic | 25.0% |
| ! | ACTACTAGTACTAATGTATA+GGG | + | chr7_4:50866545-50866564 | None:intergenic | 25.0% |
| ! | AACTACTAGTACTAATGTAT+AGG | + | chr7_4:50866546-50866565 | None:intergenic | 25.0% |
| !!! | GTGTTCAGTTATTTTGTAAT+AGG | - | chr7_4:50866573-50866592 | Msa1160780:CDS | 25.0% |
| ATAGAATAGAAAGCTAGTGT+AGG | + | chr7_4:50864675-50864694 | None:intergenic | 30.0% | |
| AAGAGATAAGGATGAAAAAG+GGG | + | chr7_4:50864723-50864742 | None:intergenic | 30.0% | |
| GAAAGAGATAAGGATGAAAA+AGG | + | chr7_4:50864725-50864744 | None:intergenic | 30.0% | |
| GATTCAGAATAATATTGGGA+TGG | - | chr7_4:50864762-50864781 | Msa1160780:three_prime_UTR | 30.0% | |
| GTTGAGTATTCAAAGAATGA+AGG | + | chr7_4:50864829-50864848 | None:intergenic | 30.0% | |
| !!! | GTTTTCACTCTTTTTTTGGT+TGG | + | chr7_4:50865232-50865251 | None:intergenic | 30.0% |
| ! | CTTTAGTAATTAAGTTGCCA+TGG | - | chr7_4:50865297-50865316 | Msa1160780:CDS | 30.0% |
| TGATGAGTGATTAAGTTCAT+TGG | + | chr7_4:50865574-50865593 | None:intergenic | 30.0% | |
| AAACCATTGTGATTTAGAAG+AGG | + | chr7_4:50865861-50865880 | None:intergenic | 30.0% | |
| !! | TCATTTTTGTCTCAAAACCT+AGG | + | chr7_4:50865938-50865957 | None:intergenic | 30.0% |
| !! | AGATATGACTGTTATTTCGT+CGG | + | chr7_4:50866154-50866173 | None:intergenic | 30.0% |
| !!! | TTTCAGCTTTGAGAGTTTTT+AGG | + | chr7_4:50866287-50866306 | None:intergenic | 30.0% |
| AAAAACTCTCAAAGCTGAAA+TGG | - | chr7_4:50866287-50866306 | Msa1160780:intron | 30.0% | |
| ! | ATTTTCTTCAGAATTCACTC+AGG | - | chr7_4:50866385-50866404 | Msa1160780:CDS | 30.0% |
| CATTGGGTTAAGATAAGTTA+AGG | + | chr7_4:50866483-50866502 | None:intergenic | 30.0% | |
| !! | TAGGATTTGTTTGCTTTTGT+TGG | - | chr7_4:50866592-50866611 | Msa1160780:CDS | 30.0% |
| ATAGAATAGAAAGCTAGTGT+AGG | + | chr7_4:50864675-50864694 | None:intergenic | 30.0% | |
| AAGAGATAAGGATGAAAAAG+GGG | + | chr7_4:50864723-50864742 | None:intergenic | 30.0% | |
| GAAAGAGATAAGGATGAAAA+AGG | + | chr7_4:50864725-50864744 | None:intergenic | 30.0% | |
| GATTCAGAATAATATTGGGA+TGG | - | chr7_4:50864762-50864781 | Msa1160780:three_prime_UTR | 30.0% | |
| GTTGAGTATTCAAAGAATGA+AGG | + | chr7_4:50864829-50864848 | None:intergenic | 30.0% | |
| !!! | GTTTTCACTCTTTTTTTGGT+TGG | + | chr7_4:50865232-50865251 | None:intergenic | 30.0% |
| ! | CTTTAGTAATTAAGTTGCCA+TGG | - | chr7_4:50865297-50865316 | Msa1160780:CDS | 30.0% |
| TGATGAGTGATTAAGTTCAT+TGG | + | chr7_4:50865574-50865593 | None:intergenic | 30.0% | |
| AAACCATTGTGATTTAGAAG+AGG | + | chr7_4:50865861-50865880 | None:intergenic | 30.0% | |
| !! | TCATTTTTGTCTCAAAACCT+AGG | + | chr7_4:50865938-50865957 | None:intergenic | 30.0% |
| !! | AGATATGACTGTTATTTCGT+CGG | + | chr7_4:50866154-50866173 | None:intergenic | 30.0% |
| !!! | TTTCAGCTTTGAGAGTTTTT+AGG | + | chr7_4:50866287-50866306 | None:intergenic | 30.0% |
| AAAAACTCTCAAAGCTGAAA+TGG | - | chr7_4:50866287-50866306 | Msa1160780:intron | 30.0% | |
| ! | ATTTTCTTCAGAATTCACTC+AGG | - | chr7_4:50866385-50866404 | Msa1160780:CDS | 30.0% |
| CATTGGGTTAAGATAAGTTA+AGG | + | chr7_4:50866483-50866502 | None:intergenic | 30.0% | |
| !! | TAGGATTTGTTTGCTTTTGT+TGG | - | chr7_4:50866592-50866611 | Msa1160780:CDS | 30.0% |
| TAGTAATAAGGGGAAGGAAA+GGG | + | chr7_4:50864638-50864657 | None:intergenic | 35.0% | |
| TGGTGGAGTAGTAGTAATAA+GGG | + | chr7_4:50864649-50864668 | None:intergenic | 35.0% | |
| ! | ATGGTGGAGTAGTAGTAATA+AGG | + | chr7_4:50864650-50864669 | None:intergenic | 35.0% |
| TAGAAAGCTAGTGTAGGTTA+TGG | + | chr7_4:50864669-50864688 | None:intergenic | 35.0% | |
| AGAGATAAGGATGAAAAAGG+GGG | + | chr7_4:50864722-50864741 | None:intergenic | 35.0% | |
| !! | GAAGCATTGTGAAAGAGATA+AGG | + | chr7_4:50864735-50864754 | None:intergenic | 35.0% |
| TAATAACCTTGGAGTTGCAA+GGG | + | chr7_4:50865056-50865075 | None:intergenic | 35.0% | |
| ATAATAACCTTGGAGTTGCA+AGG | + | chr7_4:50865057-50865076 | None:intergenic | 35.0% | |
| ACACACACAATTATCTTTGC+TGG | + | chr7_4:50865175-50865194 | None:intergenic | 35.0% | |
| ! | AGGCATATTTTCACTCATTC+TGG | + | chr7_4:50865271-50865290 | None:intergenic | 35.0% |
| ! | GTAAAGTACTACATGTTCCA+TGG | + | chr7_4:50865317-50865336 | None:intergenic | 35.0% |
| TCTTATGAGTTTAGCACAAG+TGG | - | chr7_4:50865470-50865489 | Msa1160780:intron | 35.0% | |
| ! | AGTATCGAACTCAAAACATC+CGG | + | chr7_4:50865530-50865549 | None:intergenic | 35.0% |
| ATTTAGAAGAGGCTTCTTGT+AGG | + | chr7_4:50865850-50865869 | None:intergenic | 35.0% | |
| AAGCCTCTTCTAAATCACAA+TGG | - | chr7_4:50865855-50865874 | Msa1160780:intron | 35.0% | |
| CTAGTACATGTTTGCATATG+TGG | + | chr7_4:50865896-50865915 | None:intergenic | 35.0% | |
| TGATGAAGAAAGCAAAACCT+AGG | - | chr7_4:50865955-50865974 | Msa1160780:intron | 35.0% | |
| TCAATCTTGTCACAAAACCT+AGG | + | chr7_4:50865975-50865994 | None:intergenic | 35.0% | |
| ! | TGATTGATTTCAGACAGACA+AGG | - | chr7_4:50866038-50866057 | Msa1160780:intron | 35.0% |
| GAAATAACAGTCATATCTGC+CGG | - | chr7_4:50866156-50866175 | Msa1160780:intron | 35.0% | |
| !!! | TTTTTAGGTGAAGAGACTTG+AGG | + | chr7_4:50866272-50866291 | None:intergenic | 35.0% |
| ACTGCAAATCAATCTGCATT+GGG | + | chr7_4:50866499-50866518 | None:intergenic | 35.0% | |
| ATGTATAGGGAATGAAAACG+TGG | + | chr7_4:50866532-50866551 | None:intergenic | 35.0% | |
| ! | GTTTTTCGTTTATAGAGCCT+TGG | - | chr7_4:50866614-50866633 | Msa1160780:exon | 35.0% |
| ! | TGATAACCTTGTTACTTCCA+AGG | + | chr7_4:50866634-50866653 | None:intergenic | 35.0% |
| TAGTAATAAGGGGAAGGAAA+GGG | + | chr7_4:50864638-50864657 | None:intergenic | 35.0% | |
| TGGTGGAGTAGTAGTAATAA+GGG | + | chr7_4:50864649-50864668 | None:intergenic | 35.0% | |
| ! | ATGGTGGAGTAGTAGTAATA+AGG | + | chr7_4:50864650-50864669 | None:intergenic | 35.0% |
| TAGAAAGCTAGTGTAGGTTA+TGG | + | chr7_4:50864669-50864688 | None:intergenic | 35.0% | |
| AGAGATAAGGATGAAAAAGG+GGG | + | chr7_4:50864722-50864741 | None:intergenic | 35.0% | |
| !! | GAAGCATTGTGAAAGAGATA+AGG | + | chr7_4:50864735-50864754 | None:intergenic | 35.0% |
| TAATAACCTTGGAGTTGCAA+GGG | + | chr7_4:50865056-50865075 | None:intergenic | 35.0% | |
| ATAATAACCTTGGAGTTGCA+AGG | + | chr7_4:50865057-50865076 | None:intergenic | 35.0% | |
| ACACACACAATTATCTTTGC+TGG | + | chr7_4:50865175-50865194 | None:intergenic | 35.0% | |
| ! | AGGCATATTTTCACTCATTC+TGG | + | chr7_4:50865271-50865290 | None:intergenic | 35.0% |
| ! | GTAAAGTACTACATGTTCCA+TGG | + | chr7_4:50865317-50865336 | None:intergenic | 35.0% |
| TCTTATGAGTTTAGCACAAG+TGG | - | chr7_4:50865470-50865489 | Msa1160780:intron | 35.0% | |
| ! | AGTATCGAACTCAAAACATC+CGG | + | chr7_4:50865530-50865549 | None:intergenic | 35.0% |
| ATTTAGAAGAGGCTTCTTGT+AGG | + | chr7_4:50865850-50865869 | None:intergenic | 35.0% | |
| AAGCCTCTTCTAAATCACAA+TGG | - | chr7_4:50865855-50865874 | Msa1160780:intron | 35.0% | |
| CTAGTACATGTTTGCATATG+TGG | + | chr7_4:50865896-50865915 | None:intergenic | 35.0% | |
| TGATGAAGAAAGCAAAACCT+AGG | - | chr7_4:50865955-50865974 | Msa1160780:intron | 35.0% | |
| TCAATCTTGTCACAAAACCT+AGG | + | chr7_4:50865975-50865994 | None:intergenic | 35.0% | |
| ! | TGATTGATTTCAGACAGACA+AGG | - | chr7_4:50866038-50866057 | Msa1160780:intron | 35.0% |
| GAAATAACAGTCATATCTGC+CGG | - | chr7_4:50866156-50866175 | Msa1160780:intron | 35.0% | |
| !!! | TTTTTAGGTGAAGAGACTTG+AGG | + | chr7_4:50866272-50866291 | None:intergenic | 35.0% |
| ACTGCAAATCAATCTGCATT+GGG | + | chr7_4:50866499-50866518 | None:intergenic | 35.0% | |
| ATGTATAGGGAATGAAAACG+TGG | + | chr7_4:50866532-50866551 | None:intergenic | 35.0% | |
| ! | GTTTTTCGTTTATAGAGCCT+TGG | - | chr7_4:50866614-50866633 | Msa1160780:exon | 35.0% |
| ! | TGATAACCTTGTTACTTCCA+AGG | + | chr7_4:50866634-50866653 | None:intergenic | 35.0% |
| ! | AGAGAGTGGTAGAGTTTTTG+TGG | + | chr7_4:50864615-50864634 | None:intergenic | 40.0% |
| GTAGTAATAAGGGGAAGGAA+AGG | + | chr7_4:50864639-50864658 | None:intergenic | 40.0% | |
| GAGTAGTAGTAATAAGGGGA+AGG | + | chr7_4:50864644-50864663 | None:intergenic | 40.0% | |
| GGTGGAGTAGTAGTAATAAG+GGG | + | chr7_4:50864648-50864667 | None:intergenic | 40.0% | |
| AAAGCTAGTGTAGGTTATGG+TGG | + | chr7_4:50864666-50864685 | None:intergenic | 40.0% | |
| AGATAAGGATGAAAAAGGGG+GGG | + | chr7_4:50864720-50864739 | None:intergenic | 40.0% | |
| GAGATAAGGATGAAAAAGGG+GGG | + | chr7_4:50864721-50864740 | None:intergenic | 40.0% | |
| ATGAAGGGTTGTTAGCAACA+AGG | + | chr7_4:50864813-50864832 | None:intergenic | 40.0% | |
| ! | TGTTGCATCATAGTGCTACT+AGG | + | chr7_4:50864853-50864872 | None:intergenic | 40.0% |
| TTTCAGAAACTTCAAAGGGG+TGG | + | chr7_4:50864915-50864934 | None:intergenic | 40.0% | |
| !! | AGCTGCTTTGAAGAATCACA+AGG | - | chr7_4:50864969-50864988 | Msa1160780:CDS | 40.0% |
| ATGAGTTTAGCACAAGTGGT+CGG | - | chr7_4:50865474-50865493 | Msa1160780:intron | 40.0% | |
| TGTGTAATGTGTGTCTGAAG+TGG | - | chr7_4:50865497-50865516 | Msa1160780:intron | 40.0% | |
| ! | TGTCTGAAGTGGTGTATATC+CGG | - | chr7_4:50865508-50865527 | Msa1160780:intron | 40.0% |
| TTAAGCTAGGGAAGTCACTT+AGG | - | chr7_4:50865638-50865657 | Msa1160780:intron | 40.0% | |
| ! | AGGGAAGTCACTTAGGTTTT+AGG | - | chr7_4:50865645-50865664 | Msa1160780:intron | 40.0% |
| ! | TAGCTTTTGCAAAATCGTGG+TGG | + | chr7_4:50865806-50865825 | None:intergenic | 40.0% |
| ! | TCGTAGCTTTTGCAAAATCG+TGG | + | chr7_4:50865809-50865828 | None:intergenic | 40.0% |
| TGATGAAGAAAGCAAAGCCT+AGG | - | chr7_4:50865918-50865937 | Msa1160780:intron | 40.0% | |
| !! | GACTGTTATTTCGTCGGTTT+CGG | + | chr7_4:50866148-50866167 | None:intergenic | 40.0% |
| TTTCGATTAGGTCGGGAATT+AGG | + | chr7_4:50866248-50866267 | None:intergenic | 40.0% | |
| TTGAGGATTTCGATTAGGTC+GGG | + | chr7_4:50866255-50866274 | None:intergenic | 40.0% | |
| CTTGAGGATTTCGATTAGGT+CGG | + | chr7_4:50866256-50866275 | None:intergenic | 40.0% | |
| GAGACTTGAGGATTTCGATT+AGG | + | chr7_4:50866260-50866279 | None:intergenic | 40.0% | |
| GAATTCACTCAGGTCTTTGT+TGG | - | chr7_4:50866395-50866414 | Msa1160780:CDS | 40.0% | |
| TCTTTGTTGGATAGGTCTAG+TGG | - | chr7_4:50866408-50866427 | Msa1160780:CDS | 40.0% | |
| GTTGTAACGATAGGTCGAAA+AGG | - | chr7_4:50866430-50866449 | Msa1160780:CDS | 40.0% | |
| CACTGCAAATCAATCTGCAT+TGG | + | chr7_4:50866500-50866519 | None:intergenic | 40.0% | |
| ATAGAGCCTTGGAAGTAACA+AGG | - | chr7_4:50866625-50866644 | Msa1160780:exon | 40.0% | |
| ! | AGAGAGTGGTAGAGTTTTTG+TGG | + | chr7_4:50864615-50864634 | None:intergenic | 40.0% |
| GTAGTAATAAGGGGAAGGAA+AGG | + | chr7_4:50864639-50864658 | None:intergenic | 40.0% | |
| GAGTAGTAGTAATAAGGGGA+AGG | + | chr7_4:50864644-50864663 | None:intergenic | 40.0% | |
| GGTGGAGTAGTAGTAATAAG+GGG | + | chr7_4:50864648-50864667 | None:intergenic | 40.0% | |
| AAAGCTAGTGTAGGTTATGG+TGG | + | chr7_4:50864666-50864685 | None:intergenic | 40.0% | |
| AGATAAGGATGAAAAAGGGG+GGG | + | chr7_4:50864720-50864739 | None:intergenic | 40.0% | |
| GAGATAAGGATGAAAAAGGG+GGG | + | chr7_4:50864721-50864740 | None:intergenic | 40.0% | |
| ATGAAGGGTTGTTAGCAACA+AGG | + | chr7_4:50864813-50864832 | None:intergenic | 40.0% | |
| ! | TGTTGCATCATAGTGCTACT+AGG | + | chr7_4:50864853-50864872 | None:intergenic | 40.0% |
| TTTCAGAAACTTCAAAGGGG+TGG | + | chr7_4:50864915-50864934 | None:intergenic | 40.0% | |
| !! | AGCTGCTTTGAAGAATCACA+AGG | - | chr7_4:50864969-50864988 | Msa1160780:CDS | 40.0% |
| ATGAGTTTAGCACAAGTGGT+CGG | - | chr7_4:50865474-50865493 | Msa1160780:intron | 40.0% | |
| TGTGTAATGTGTGTCTGAAG+TGG | - | chr7_4:50865497-50865516 | Msa1160780:intron | 40.0% | |
| ! | TGTCTGAAGTGGTGTATATC+CGG | - | chr7_4:50865508-50865527 | Msa1160780:intron | 40.0% |
| TTAAGCTAGGGAAGTCACTT+AGG | - | chr7_4:50865638-50865657 | Msa1160780:intron | 40.0% | |
| ! | AGGGAAGTCACTTAGGTTTT+AGG | - | chr7_4:50865645-50865664 | Msa1160780:intron | 40.0% |
| ! | TAGCTTTTGCAAAATCGTGG+TGG | + | chr7_4:50865806-50865825 | None:intergenic | 40.0% |
| ! | TCGTAGCTTTTGCAAAATCG+TGG | + | chr7_4:50865809-50865828 | None:intergenic | 40.0% |
| TGATGAAGAAAGCAAAGCCT+AGG | - | chr7_4:50865918-50865937 | Msa1160780:intron | 40.0% | |
| !! | GACTGTTATTTCGTCGGTTT+CGG | + | chr7_4:50866148-50866167 | None:intergenic | 40.0% |
| TTTCGATTAGGTCGGGAATT+AGG | + | chr7_4:50866248-50866267 | None:intergenic | 40.0% | |
| TTGAGGATTTCGATTAGGTC+GGG | + | chr7_4:50866255-50866274 | None:intergenic | 40.0% | |
| CTTGAGGATTTCGATTAGGT+CGG | + | chr7_4:50866256-50866275 | None:intergenic | 40.0% | |
| GAGACTTGAGGATTTCGATT+AGG | + | chr7_4:50866260-50866279 | None:intergenic | 40.0% | |
| GAATTCACTCAGGTCTTTGT+TGG | - | chr7_4:50866395-50866414 | Msa1160780:CDS | 40.0% | |
| TCTTTGTTGGATAGGTCTAG+TGG | - | chr7_4:50866408-50866427 | Msa1160780:CDS | 40.0% | |
| GTTGTAACGATAGGTCGAAA+AGG | - | chr7_4:50866430-50866449 | Msa1160780:CDS | 40.0% | |
| CACTGCAAATCAATCTGCAT+TGG | + | chr7_4:50866500-50866519 | None:intergenic | 40.0% | |
| ATAGAGCCTTGGAAGTAACA+AGG | - | chr7_4:50866625-50866644 | Msa1160780:exon | 40.0% | |
| ! | GAGTGGTAGAGTTTTTGTGG+TGG | + | chr7_4:50864612-50864631 | None:intergenic | 45.0% |
| AGAGCTCTATCTTGCTGAGA+GGG | + | chr7_4:50864949-50864968 | None:intergenic | 45.0% | |
| TAGAGCTCTATCTTGCTGAG+AGG | + | chr7_4:50864950-50864969 | None:intergenic | 45.0% | |
| AGGAAGCTGAGAAGAGAAGA+AGG | - | chr7_4:50864989-50865008 | Msa1160780:CDS | 45.0% | |
| GGAAGCTGAGAAGAGAAGAA+GGG | - | chr7_4:50864990-50865009 | Msa1160780:CDS | 45.0% | |
| !! | GTTATTTCGTCGGTTTCGGA+TGG | + | chr7_4:50866144-50866163 | None:intergenic | 45.0% |
| GAATATGAGTCTGCCTTCGT+CGG | + | chr7_4:50866193-50866212 | None:intergenic | 45.0% | |
| GATTAGGTCGGGAATTAGGT+CGG | + | chr7_4:50866244-50866263 | None:intergenic | 45.0% | |
| AAAGCTGAAATGGCCACACT+TGG | - | chr7_4:50866297-50866316 | Msa1160780:intron | 45.0% | |
| CACTCAGGTCTTTGTTGGAT+AGG | - | chr7_4:50866400-50866419 | Msa1160780:CDS | 45.0% | |
| GGTCTAGTGGTTGTAACGAT+AGG | - | chr7_4:50866421-50866440 | Msa1160780:CDS | 45.0% | |
| ! | GAGTGGTAGAGTTTTTGTGG+TGG | + | chr7_4:50864612-50864631 | None:intergenic | 45.0% |
| AGAGCTCTATCTTGCTGAGA+GGG | + | chr7_4:50864949-50864968 | None:intergenic | 45.0% | |
| TAGAGCTCTATCTTGCTGAG+AGG | + | chr7_4:50864950-50864969 | None:intergenic | 45.0% | |
| AGGAAGCTGAGAAGAGAAGA+AGG | - | chr7_4:50864989-50865008 | Msa1160780:CDS | 45.0% | |
| GGAAGCTGAGAAGAGAAGAA+GGG | - | chr7_4:50864990-50865009 | Msa1160780:CDS | 45.0% | |
| !! | GTTATTTCGTCGGTTTCGGA+TGG | + | chr7_4:50866144-50866163 | None:intergenic | 45.0% |
| GAATATGAGTCTGCCTTCGT+CGG | + | chr7_4:50866193-50866212 | None:intergenic | 45.0% | |
| GATTAGGTCGGGAATTAGGT+CGG | + | chr7_4:50866244-50866263 | None:intergenic | 45.0% | |
| AAAGCTGAAATGGCCACACT+TGG | - | chr7_4:50866297-50866316 | Msa1160780:intron | 45.0% | |
| CACTCAGGTCTTTGTTGGAT+AGG | - | chr7_4:50866400-50866419 | Msa1160780:CDS | 45.0% | |
| GGTCTAGTGGTTGTAACGAT+AGG | - | chr7_4:50866421-50866440 | Msa1160780:CDS | 45.0% | |
| !!! | TTTTATTTTTTTACTATTTA+AGG | + | chr7_4:50865601-50865620 | None:intergenic | 5.0% |
| !!! | TTTTATTTTTTTACTATTTA+AGG | + | chr7_4:50865601-50865620 | None:intergenic | 5.0% |
| ! | GAAGGGTACGAAGATGGTCA+AGG | + | chr7_4:50865032-50865051 | None:intergenic | 50.0% |
| ! | AAGGGAGAAGGGTACGAAGA+TGG | + | chr7_4:50865038-50865057 | None:intergenic | 50.0% |
| CTTGGAGTTGCAAGGGAGAA+GGG | + | chr7_4:50865049-50865068 | None:intergenic | 50.0% | |
| TTCGTCGGAGATGTCATTGC+CGG | + | chr7_4:50866178-50866197 | None:intergenic | 50.0% | |
| ACGTGTTCTTCCACCAAGTG+TGG | + | chr7_4:50866313-50866332 | None:intergenic | 50.0% | |
| !! | ATAGGTCGAAAAGGCGTCGA+GGG | - | chr7_4:50866439-50866458 | Msa1160780:CDS | 50.0% |
| ! | GAAGGGTACGAAGATGGTCA+AGG | + | chr7_4:50865032-50865051 | None:intergenic | 50.0% |
| ! | AAGGGAGAAGGGTACGAAGA+TGG | + | chr7_4:50865038-50865057 | None:intergenic | 50.0% |
| CTTGGAGTTGCAAGGGAGAA+GGG | + | chr7_4:50865049-50865068 | None:intergenic | 50.0% | |
| TTCGTCGGAGATGTCATTGC+CGG | + | chr7_4:50866178-50866197 | None:intergenic | 50.0% | |
| ACGTGTTCTTCCACCAAGTG+TGG | + | chr7_4:50866313-50866332 | None:intergenic | 50.0% | |
| !! | ATAGGTCGAAAAGGCGTCGA+GGG | - | chr7_4:50866439-50866458 | Msa1160780:CDS | 50.0% |
| ! | GGATGAAAAAGGGGGGGTGT+AGG | + | chr7_4:50864714-50864733 | None:intergenic | 55.0% |
| CCTTGGAGTTGCAAGGGAGA+AGG | + | chr7_4:50865050-50865069 | None:intergenic | 55.0% | |
| CCTTCTCCCTTGCAACTCCA+AGG | - | chr7_4:50865047-50865066 | Msa1160780:CDS | 55.0% | |
| GGCAATGACATCTCCGACGA+AGG | - | chr7_4:50866177-50866196 | Msa1160780:intron | 55.0% | |
| GCTGAAATGGCCACACTTGG+TGG | - | chr7_4:50866300-50866319 | Msa1160780:intron | 55.0% | |
| !! | GATAGGTCGAAAAGGCGTCG+AGG | - | chr7_4:50866438-50866457 | Msa1160780:CDS | 55.0% |
| ! | GGATGAAAAAGGGGGGGTGT+AGG | + | chr7_4:50864714-50864733 | None:intergenic | 55.0% |
| CCTTGGAGTTGCAAGGGAGA+AGG | + | chr7_4:50865050-50865069 | None:intergenic | 55.0% | |
| CCTTCTCCCTTGCAACTCCA+AGG | - | chr7_4:50865047-50865066 | Msa1160780:CDS | 55.0% | |
| GGCAATGACATCTCCGACGA+AGG | - | chr7_4:50866177-50866196 | Msa1160780:intron | 55.0% | |
| GCTGAAATGGCCACACTTGG+TGG | - | chr7_4:50866300-50866319 | Msa1160780:intron | 55.0% | |
| !! | GATAGGTCGAAAAGGCGTCG+AGG | - | chr7_4:50866438-50866457 | Msa1160780:CDS | 55.0% |
| GGGGAAGGAAAGGGAGAGAG+TGG | + | chr7_4:50864629-50864648 | None:intergenic | 60.0% | |
| !! | GTCGAAAAGGCGTCGAGGGT+TGG | - | chr7_4:50866443-50866462 | Msa1160780:CDS | 60.0% |
| GGGGAAGGAAAGGGAGAGAG+TGG | + | chr7_4:50864629-50864648 | None:intergenic | 60.0% | |
| !! | GTCGAAAAGGCGTCGAGGGT+TGG | - | chr7_4:50866443-50866462 | Msa1160780:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 50864585 | 50866789 | 50864585 | ID=Msa1160780;Name=Msa1160780 |
| chr7_4 | mRNA | 50864585 | 50866789 | 50864585 | ID=Msa1160780-mRNA-1;Parent=Msa1160780;Name=Msa1160780-mRNA-1;_AED=0.00;_eAED=0.00;_QI=163|1|1|1|1|1|2|304|251 |
| chr7_4 | exon | 50864585 | 50865323 | 50864585 | ID=Msa1160780-mRNA-1:exon:14239;Parent=Msa1160780-mRNA-1 |
| chr7_4 | exon | 50866306 | 50866789 | 50866306 | ID=Msa1160780-mRNA-1:exon:14238;Parent=Msa1160780-mRNA-1 |
| chr7_4 | five_prime_UTR | 50866627 | 50866789 | 50866627 | ID=Msa1160780-mRNA-1:five_prime_utr;Parent=Msa1160780-mRNA-1 |
| chr7_4 | CDS | 50866306 | 50866626 | 50866306 | ID=Msa1160780-mRNA-1:cds;Parent=Msa1160780-mRNA-1 |
| chr7_4 | CDS | 50864889 | 50865323 | 50864889 | ID=Msa1160780-mRNA-1:cds;Parent=Msa1160780-mRNA-1 |
| chr7_4 | three_prime_UTR | 50864585 | 50864888 | 50864585 | ID=Msa1160780-mRNA-1:three_prime_utr;Parent=Msa1160780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
