AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1190520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1190520 MtrunA17_Chr8g0359921 96.353 329 12 0 1 329 1 329 0.0 665
Msa1190520 MtrunA17_Chr2g0318081 63.584 346 101 8 1 326 3 343 9.45e-145 412
Msa1190520 MtrunA17_Chr3g0124761 70.552 163 46 2 10 171 3 164 6.48e-79 242
Msa1190520 MtrunA17_Chr2g0318101 64.740 173 50 3 11 172 12 184 2.84e-74 233
Msa1190520 MtrunA17_Chr7g0252971 46.233 292 112 10 1 266 1 273 3.03e-74 232
Msa1190520 MtrunA17_Chr4g0047841 63.934 183 43 4 14 173 15 197 4.98e-74 231
Msa1190520 MtrunA17_Chr8g0384721 68.944 161 47 2 12 170 5 164 1.11e-73 229
Msa1190520 MtrunA17_Chr3g0130731 67.683 164 45 3 11 170 4 163 2.59e-73 228
Msa1190520 MtrunA17_Chr5g0417791 62.500 160 58 1 12 169 1 160 1.47e-71 223
Msa1190520 MtrunA17_Chr4g0042561 63.399 153 54 1 14 164 9 161 6.08e-70 219
Msa1190520 MtrunA17_Chr7g0263931 57.436 195 73 4 5 195 2 190 2.69e-69 219
Msa1190520 MtrunA17_Chr2g0326361 59.770 174 61 3 10 174 10 183 3.73e-67 213
Msa1190520 MtrunA17_Chr2g0309891 53.179 173 74 3 9 179 1 168 2.75e-60 196
Msa1190520 MtrunA17_Chr6g0453451 54.375 160 73 0 11 170 17 176 3.14e-59 193
Msa1190520 MtrunA17_Chr4g0060931 55.625 160 71 0 11 170 14 173 6.08e-59 193
Msa1190520 MtrunA17_Chr6g0484441 56.329 158 65 2 13 170 4 157 6.97e-59 192
Msa1190520 MtrunA17_Chr5g0433781 56.875 160 65 2 9 166 1 158 1.07e-58 199
Msa1190520 MtrunA17_Chr3g0091921 53.631 179 83 0 11 189 13 191 1.68e-58 190
Msa1190520 MtrunA17_Chr7g0253011 55.828 163 68 1 12 170 15 177 2.12e-57 190
Msa1190520 MtrunA17_Chr3g0109821 57.500 160 65 2 9 166 1 159 4.38e-56 193
Msa1190520 MtrunA17_Chr6g0481091 52.830 159 71 2 9 165 1 157 6.27e-56 182
Msa1190520 MtrunA17_Chr3g0139331 54.375 160 67 2 13 170 10 165 3.70e-55 183
Msa1190520 MtrunA17_Chr4g0076731 58.000 150 58 2 16 164 56 201 4.53e-55 185
Msa1190520 MtrunA17_Chr2g0316971 55.769 156 67 1 14 167 23 178 2.76e-54 182
Msa1190520 MtrunA17_Chr5g0417001 56.024 166 64 6 16 172 16 181 3.78e-54 182
Msa1190520 MtrunA17_Chr6g0461661 52.695 167 77 1 12 176 16 182 2.72e-53 179
Msa1190520 MtrunA17_Chr1g0147421 52.174 161 70 3 13 170 26 182 5.52e-53 178
Msa1190520 MtrunA17_Chr4g0017921 53.896 154 63 2 14 164 8 156 8.16e-53 177
Msa1190520 MtrunA17_Chr2g0312321 40.807 223 121 5 9 228 6 220 1.32e-52 175
Msa1190520 MtrunA17_Chr2g0309331 50.296 169 73 4 11 172 7 171 1.84e-52 176
Msa1190520 MtrunA17_Chr6g0453131 53.086 162 68 3 14 167 15 176 2.11e-52 177
Msa1190520 MtrunA17_Chr8g0361731 51.497 167 71 5 16 172 16 182 3.02e-52 177
Msa1190520 MtrunA17_Chr1g0200561 39.744 234 117 5 3 231 6 220 1.18e-51 174
Msa1190520 MtrunA17_Chr7g0217721 46.821 173 79 1 11 170 16 188 3.35e-51 173
Msa1190520 MtrunA17_Chr5g0400461 52.121 165 65 3 13 168 5 164 7.77e-51 171
Msa1190520 MtrunA17_Chr8g0346001 48.780 164 74 3 11 164 12 175 3.78e-50 172
Msa1190520 MtrunA17_Chr7g0214071 54.321 162 65 4 11 170 12 166 3.82e-50 167
Msa1190520 MtrunA17_Chr2g0311661 45.933 209 91 7 16 207 23 226 5.96e-50 168
Msa1190520 MtrunA17_Chr4g0018391 33.232 328 176 10 14 314 7 318 1.28e-49 169
Msa1190520 MtrunA17_Chr8g0372121 48.428 159 75 2 14 169 6 160 2.67e-49 167
Msa1190520 MtrunA17_Chr7g0217711 55.396 139 61 1 11 148 16 154 3.59e-49 162
Msa1190520 MtrunA17_Chr4g0056541 45.029 171 87 2 14 181 7 173 7.70e-49 167
Msa1190520 MtrunA17_Chr5g0405211 46.875 160 78 2 14 170 8 163 1.15e-48 166
Msa1190520 MtrunA17_Chr2g0311651 51.744 172 67 6 16 172 24 194 8.53e-48 163
Msa1190520 MtrunA17_Chr5g0442771 45.596 193 95 2 16 198 20 212 1.22e-47 162
Msa1190520 MtrunA17_Chr4g0054791 51.829 164 70 4 13 170 5 165 1.28e-46 160
Msa1190520 MtrunA17_Chr5g0398971 48.387 155 73 3 14 164 7 158 1.38e-46 160
Msa1190520 MtrunA17_Chr1g0183741 43.956 182 92 3 13 192 9 182 2.74e-45 155
Msa1190520 MtrunA17_Chr4g0038751 49.375 160 70 3 11 167 13 164 1.03e-44 154
Msa1190520 MtrunA17_Chr1g0197351 50.000 160 74 2 13 166 41 200 1.71e-44 158
Msa1190520 MtrunA17_Chr5g0428991 39.676 247 129 6 9 244 20 257 2.50e-44 160
Msa1190520 MtrunA17_Chr7g0261411 48.684 152 70 2 13 162 9 154 2.61e-44 153
Msa1190520 MtrunA17_Chr3g0128151 50.920 163 74 3 9 168 17 176 8.07e-44 158
Msa1190520 MtrunA17_Chr3g0128111 40.000 210 103 5 17 223 45 234 1.58e-43 150
Msa1190520 MtrunA17_Chr1g0201021 46.795 156 79 3 12 165 17 170 7.05e-43 155
Msa1190520 MtrunA17_Chr3g0092671 47.273 165 75 4 12 170 3 161 9.52e-43 154
Msa1190520 MtrunA17_Chr3g0144271 56.589 129 53 2 14 139 23 151 1.18e-42 152
Msa1190520 MtrunA17_Chr3g0131911 48.466 163 74 3 14 168 14 174 2.31e-42 147
Msa1190520 MtrunA17_Chr3g0130101 45.695 151 78 2 16 164 9 157 5.41e-42 149
Msa1190520 MtrunA17_Chr8g0364791 46.405 153 78 2 14 164 6 156 8.05e-42 150
Msa1190520 MtrunA17_Chr8g0385991 46.405 153 75 3 14 161 14 164 3.59e-41 143
Msa1190520 MtrunA17_Chr1g0197361 46.203 158 79 3 16 170 10 164 1.24e-39 147
Msa1190520 MtrunA17_Chr8g0384201 44.444 153 81 2 14 164 6 156 1.48e-39 145
Msa1190520 MtrunA17_Chr2g0321631 46.795 156 75 5 15 162 5 160 1.81e-36 131
Msa1190520 MtrunA17_Chr4g0050701 41.975 162 80 3 14 169 11 164 2.43e-36 129
Msa1190520 MtrunA17_Chr4g0026141 43.671 158 78 5 14 162 5 160 4.70e-36 130
Msa1190520 MtrunA17_Chr2g0321741 41.615 161 73 5 34 193 12 152 6.09e-35 130
Msa1190520 MtrunA17_Chr3g0113001 46.763 139 71 3 63 198 14 152 7.06e-35 129
Msa1190520 MtrunA17_Chr8g0345671 47.097 155 65 7 14 161 11 155 2.40e-34 129
Msa1190520 MtrunA17_Chr7g0266701 38.650 163 90 6 13 165 3 165 3.91e-34 125
Msa1190520 MtrunA17_Chr8g0345691 36.364 220 118 8 14 224 12 218 1.69e-29 117
Msa1190520 MtrunA17_Chr8g0345711 38.509 161 84 6 13 159 11 170 8.12e-28 106
Msa1190520 MtrunA17_Chr3g0113031 42.857 126 68 3 77 198 3 128 5.64e-26 104
Msa1190520 MtrunA17_Chr8g0345721 37.079 178 70 7 1 137 15 191 2.56e-25 101
Msa1190520 MtrunA17_Chr8g0345731 38.000 150 83 5 14 153 24 173 2.69e-25 100
Msa1190520 MtrunA17_Chr8g0384351 34.951 206 104 7 10 211 6 185 3.15e-25 100
Msa1190520 MtrunA17_Chr8g0345701 39.189 148 68 6 10 138 3 147 1.30e-22 92.8
Msa1190520 MtrunA17_Chr3g0130321 32.075 212 124 7 12 211 5 208 3.77e-22 92.4
Msa1190520 MtrunA17_Chr7g0243371 58.667 75 29 2 67 139 17 91 3.90e-22 89.7
Msa1190520 MtrunA17_Chr8g0345741 37.063 143 73 6 25 162 2 132 1.70e-21 89.4
Msa1190520 MtrunA17_Chr7g0251661 31.250 144 90 5 10 147 6 146 6.58e-19 82.4
Msa1190520 MtrunA17_Chr7g0251651 33.077 130 79 5 12 137 16 141 6.89e-15 72.0
Msa1190520 MtrunA17_Chr8g0389661 32.895 152 76 5 12 139 45 194 4.11e-13 69.7
Msa1190520 MtrunA17_Chr3g0113011 50.000 54 27 0 11 64 16 69 4.51e-12 60.8
Msa1190520 MtrunA17_Chr1g0198751 33.333 141 78 6 14 139 58 197 1.64e-11 65.1
Msa1190520 MtrunA17_Chr4g0040541 31.469 143 80 4 14 139 48 189 2.35e-11 63.5
Msa1190520 MtrunA17_Chr7g0274971 32.317 164 90 8 20 171 11 165 9.66e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1190520 AT4G27410.2 68.030 269 65 6 1 265 1 252 1.11e-118 344
Msa1190520 AT4G27410.3 64.336 286 64 7 1 265 1 269 4.43e-115 336
Msa1190520 AT1G52890.1 64.621 277 81 7 1 263 1 274 1.22e-114 335
Msa1190520 AT3G15500.1 65.152 264 75 4 1 251 1 260 2.71e-112 328
Msa1190520 AT1G01720.1 70.122 164 46 2 12 173 5 167 1.45e-78 242
Msa1190520 AT5G08790.1 61.749 183 66 2 10 189 3 184 7.75e-75 232
Msa1190520 AT3G04070.2 65.318 173 48 4 6 168 4 174 5.48e-73 229
Msa1190520 AT5G63790.2 61.081 185 62 3 10 188 56 236 1.24e-72 228
Msa1190520 AT5G63790.1 61.081 185 62 3 10 188 46 226 1.41e-72 227
Msa1190520 AT1G61110.1 64.972 177 51 3 14 179 16 192 2.55e-72 227
Msa1190520 AT1G77450.1 52.018 223 100 3 10 231 6 222 6.93e-72 223
Msa1190520 AT3G04070.1 61.905 189 44 6 6 168 4 190 8.60e-71 224
Msa1190520 AT1G69490.1 65.644 163 52 2 10 169 5 166 1.61e-70 220
Msa1190520 AT3G15510.1 65.455 165 42 4 18 169 21 183 7.11e-69 219
Msa1190520 AT1G52880.1 65.217 161 46 3 18 168 21 181 1.69e-62 201
Msa1190520 AT3G18400.1 48.020 202 96 3 13 214 4 196 6.21e-61 197
Msa1190520 AT5G07680.1 55.294 170 76 0 1 170 4 173 2.03e-60 196
Msa1190520 AT5G61430.1 57.229 166 70 1 11 176 13 177 3.69e-60 196
Msa1190520 AT5G07680.2 57.233 159 68 0 12 170 1 159 4.17e-59 192
Msa1190520 AT5G39610.1 56.250 160 70 0 11 170 17 176 9.91e-58 188
Msa1190520 AT2G24430.2 54.938 162 68 2 13 172 15 173 3.72e-57 187
Msa1190520 AT2G24430.1 54.938 162 68 2 13 172 15 173 3.72e-57 187
Msa1190520 AT5G53950.1 50.802 187 84 2 14 192 17 203 7.26e-57 189
Msa1190520 AT3G04060.1 50.802 187 85 2 12 197 18 198 7.76e-57 187
Msa1190520 AT2G02450.1 53.409 176 75 4 16 188 53 224 9.63e-57 188
Msa1190520 AT2G02450.2 53.409 176 75 4 16 188 53 224 9.64e-57 189
Msa1190520 AT5G18270.2 50.267 187 91 2 12 197 19 204 1.41e-56 187
Msa1190520 AT5G18270.1 49.733 187 92 2 12 197 19 204 4.10e-56 186
Msa1190520 AT1G65910.1 54.268 164 71 2 9 170 1 162 5.46e-56 192
Msa1190520 AT3G03200.1 54.430 158 69 2 9 164 1 157 5.31e-55 186
Msa1190520 AT3G15170.1 47.368 190 96 2 14 199 20 209 1.17e-54 181
Msa1190520 AT3G17730.1 49.153 177 84 3 9 181 1 175 1.29e-54 179
Msa1190520 AT3G29035.1 54.658 161 73 0 11 171 21 181 1.35e-54 181
Msa1190520 AT5G17260.1 54.430 158 69 2 9 164 1 157 2.03e-54 185
Msa1190520 AT5G39820.1 50.829 181 66 4 16 173 22 202 8.11e-54 179
Msa1190520 AT2G33480.1 56.688 157 63 2 12 168 13 164 1.85e-53 177
Msa1190520 AT2G43000.1 48.705 193 88 3 16 199 20 210 1.88e-53 177
Msa1190520 AT1G26870.1 53.049 164 68 3 14 168 16 179 9.03e-53 179
Msa1190520 AT2G33480.2 55.975 159 59 3 12 168 13 162 1.31e-52 174
Msa1190520 AT5G13180.1 56.522 161 62 5 12 170 12 166 5.86e-52 172
Msa1190520 AT4G17980.1 50.279 179 85 2 14 188 6 184 9.27e-52 172
Msa1190520 AT3G12977.1 42.051 195 103 4 9 203 13 197 1.21e-51 172
Msa1190520 AT4G17980.2 50.279 179 85 2 14 188 6 184 1.52e-51 172
Msa1190520 AT1G54330.1 53.459 159 67 2 9 165 1 154 2.23e-51 172
Msa1190520 AT1G71930.2 45.562 169 85 2 7 172 2 166 2.50e-51 173
Msa1190520 AT1G71930.1 45.562 169 85 2 7 172 2 166 2.50e-51 173
Msa1190520 AT4G10350.1 51.948 154 69 2 14 164 9 160 3.06e-51 173
Msa1190520 AT1G33280.1 51.282 156 68 2 14 166 8 158 9.73e-51 171
Msa1190520 AT1G56010.2 48.447 161 79 3 9 166 14 173 1.94e-50 171
Msa1190520 AT2G46770.1 43.810 210 100 7 11 202 13 222 2.55e-50 171
Msa1190520 AT2G18060.3 42.051 195 105 3 7 197 2 192 3.59e-50 171
Msa1190520 AT2G18060.1 42.051 195 105 3 7 197 2 192 3.59e-50 171
Msa1190520 AT1G79580.3 51.899 158 67 3 11 164 14 166 6.12e-50 171
Msa1190520 AT1G79580.5 51.899 158 67 3 11 164 14 166 6.12e-50 171
Msa1190520 AT1G79580.4 51.899 158 67 3 11 164 14 166 6.12e-50 171
Msa1190520 AT1G79580.2 51.899 158 67 3 11 164 14 166 6.12e-50 171
Msa1190520 AT1G79580.1 51.899 158 67 3 11 164 14 166 6.12e-50 171
Msa1190520 AT1G76420.1 50.286 175 72 4 1 164 1 171 7.73e-50 169
Msa1190520 AT5G66300.1 47.879 165 76 3 13 174 11 168 2.41e-49 167
Msa1190520 AT3G61910.1 40.654 214 99 5 11 206 8 211 5.83e-49 167
Msa1190520 AT5G46590.1 55.128 156 64 4 14 165 6 159 6.35e-49 166
Msa1190520 AT5G62380.2 42.381 210 106 5 14 219 7 205 3.48e-48 165
Msa1190520 AT5G62380.1 42.381 210 106 5 14 219 7 205 3.48e-48 165
Msa1190520 AT3G10480.1 50.625 160 76 2 9 166 22 180 4.72e-48 167
Msa1190520 AT1G12260.2 45.509 167 84 2 14 177 7 169 5.93e-48 164
Msa1190520 AT1G12260.1 45.509 167 84 2 14 177 7 169 7.81e-48 166
Msa1190520 AT1G32770.1 46.061 165 78 2 11 164 13 177 8.98e-48 164
Msa1190520 AT1G32510.1 49.133 173 76 4 14 176 6 176 1.01e-47 162
Msa1190520 AT2G17040.1 42.152 223 103 7 16 223 8 219 1.19e-47 162
Msa1190520 AT3G10480.2 51.250 160 74 3 9 166 22 179 1.25e-47 166
Msa1190520 AT4G36160.1 49.032 155 72 2 13 164 9 159 2.31e-47 164
Msa1190520 AT4G36160.3 49.032 155 72 2 13 164 9 159 2.31e-47 164
Msa1190520 AT4G36160.2 49.032 155 72 2 13 164 13 163 2.81e-47 164
Msa1190520 AT1G62700.1 48.701 154 72 2 14 164 7 156 4.04e-47 164
Msa1190520 AT1G62700.2 48.701 154 72 2 14 164 7 156 4.04e-47 164
Msa1190520 AT3G10490.1 49.359 156 76 2 13 166 26 180 1.10e-46 158
Msa1190520 AT5G46590.2 58.779 131 51 2 14 141 6 136 1.62e-46 159
Msa1190520 AT1G33060.2 48.795 166 81 2 5 168 15 178 2.55e-46 166
Msa1190520 AT1G33060.1 48.795 166 81 2 5 168 15 178 2.90e-46 166
Msa1190520 AT5G24590.2 45.833 192 95 4 9 195 8 195 6.85e-46 162
Msa1190520 AT3G12910.1 48.634 183 76 5 16 183 23 202 6.93e-46 158
Msa1190520 AT3G10490.2 49.359 156 76 2 13 166 26 180 9.46e-46 161
Msa1190520 AT4G35580.2 50.617 162 68 3 9 164 4 159 1.37e-45 162
Msa1190520 AT4G35580.3 50.617 162 68 3 9 164 4 159 1.38e-45 162
Msa1190520 AT4G35580.1 50.617 162 68 3 9 164 4 159 1.90e-45 162
Msa1190520 AT5G04410.1 49.080 163 79 2 10 170 5 165 4.85e-45 162
Msa1190520 AT3G10500.1 49.091 165 76 3 10 170 5 165 5.78e-45 161
Msa1190520 AT1G34180.3 41.951 205 99 5 16 216 18 206 1.08e-44 159
Msa1190520 AT1G34180.1 41.951 205 99 5 16 216 18 206 7.10e-44 158
Msa1190520 AT1G34190.1 45.283 159 79 3 16 170 18 172 6.17e-43 155
Msa1190520 AT3G10480.3 43.005 193 74 3 9 166 22 213 7.85e-43 155
Msa1190520 AT1G34180.4 40.183 219 95 6 16 216 18 218 7.92e-43 154
Msa1190520 AT3G49530.2 49.375 160 74 4 9 164 8 164 1.13e-42 152
Msa1190520 AT3G49530.1 49.375 160 74 4 9 164 8 164 3.94e-42 152
Msa1190520 AT2G27300.1 45.399 163 75 3 13 170 13 166 4.48e-42 149
Msa1190520 AT1G34180.2 40.183 219 95 6 16 216 18 218 4.96e-42 154
Msa1190520 AT5G64060.1 44.025 159 85 2 9 165 1 157 8.11e-42 149
Msa1190520 AT4G28530.1 45.665 173 70 5 14 168 10 176 4.97e-41 147
Msa1190520 AT1G32870.2 50.943 159 74 2 14 170 10 166 1.12e-40 149
Msa1190520 AT1G32870.1 50.943 159 74 2 14 170 10 166 1.33e-40 149
Msa1190520 AT1G32870.3 50.943 159 74 2 14 170 46 202 2.87e-40 149
Msa1190520 AT3G44290.2 43.871 155 76 3 16 169 16 160 1.79e-39 139
Msa1190520 AT5G22290.1 39.796 196 98 6 16 200 23 209 6.86e-39 140
Msa1190520 AT3G44290.1 43.871 155 76 3 16 169 16 160 1.38e-38 140
Msa1190520 AT5G61430.2 57.895 114 47 1 63 176 2 114 2.26e-38 137
Msa1190520 AT5G09330.5 42.138 159 88 2 9 165 1 157 5.29e-38 141
Msa1190520 AT5G09330.2 42.138 159 88 2 9 165 1 157 5.29e-38 141
Msa1190520 AT5G09330.4 42.138 159 88 2 9 165 1 157 5.29e-38 141
Msa1190520 AT5G09330.3 42.138 159 88 2 9 165 1 157 5.29e-38 141
Msa1190520 AT5G09330.1 42.138 159 88 2 9 165 1 157 5.29e-38 141
Msa1190520 AT5G64530.1 40.678 177 73 5 12 171 1 162 1.37e-34 125
Msa1190520 AT3G12977.2 43.972 141 69 4 63 203 14 144 1.50e-34 126
Msa1190520 AT1G56010.1 53.774 106 46 2 63 166 2 106 1.91e-34 127
Msa1190520 AT2G33480.3 55.882 102 43 1 67 168 8 107 2.22e-32 120
Msa1190520 AT4G10350.2 55.102 98 42 1 67 164 18 113 4.01e-32 122
Msa1190520 AT3G44350.2 39.024 164 89 5 14 169 5 165 9.15e-32 119
Msa1190520 AT5G22380.1 34.975 203 108 7 17 209 8 196 2.03e-31 118
Msa1190520 AT5G64530.2 46.970 132 56 3 12 141 1 120 4.44e-31 115
Msa1190520 AT3G44350.1 41.304 138 71 4 14 143 5 140 1.68e-28 108
Msa1190520 AT5G04395.1 41.096 146 70 3 10 139 24 169 4.48e-28 108
Msa1190520 AT2G43000.2 43.609 133 64 3 76 199 2 132 7.75e-26 102
Msa1190520 AT3G04420.2 41.732 127 70 2 15 137 4 130 1.44e-25 104
Msa1190520 AT4G28530.2 35.673 171 53 4 14 168 10 139 2.40e-25 103
Msa1190520 AT3G04420.1 41.732 127 70 2 15 137 4 130 3.23e-25 104
Msa1190520 AT4G01550.1 30.453 243 137 8 17 241 7 235 1.05e-24 104
Msa1190520 AT4G01520.1 40.909 132 71 4 15 139 5 136 2.32e-23 98.2
Msa1190520 AT4G27410.1 61.798 89 28 3 134 218 1 87 3.27e-23 94.7
Msa1190520 AT4G01540.3 41.538 130 69 4 17 139 7 136 7.80e-23 98.6
Msa1190520 AT4G01540.4 36.196 163 84 6 17 169 7 159 1.01e-22 97.8
Msa1190520 AT4G01540.1 41.538 130 69 4 17 139 7 136 1.06e-22 98.6
Msa1190520 AT4G01540.2 41.538 130 69 4 17 139 7 136 1.15e-22 98.2
Msa1190520 AT1G02230.1 40.769 130 67 5 15 137 4 130 1.21e-21 94.4
Msa1190520 AT1G02220.1 37.692 130 74 3 12 137 1 127 9.60e-21 92.4
Msa1190520 AT5G50820.1 33.514 185 101 7 12 185 15 188 2.09e-20 87.8
Msa1190520 AT1G02250.1 33.721 172 98 5 12 176 1 163 5.91e-20 89.7
Msa1190520 AT3G10490.4 48.750 80 40 1 87 166 2 80 1.21e-19 88.6
Msa1190520 AT3G10490.3 48.750 80 40 1 87 166 2 80 1.21e-19 88.6
Msa1190520 AT3G56530.1 34.194 155 95 4 11 162 49 199 4.83e-19 86.7
Msa1190520 AT1G01010.1 33.125 160 86 6 17 164 6 156 4.70e-17 82.0
Msa1190520 AT5G14000.1 31.288 163 101 4 12 171 13 167 5.05e-17 79.0
Msa1190520 AT2G18060.2 37.383 107 62 2 92 197 2 104 6.99e-17 79.7
Msa1190520 AT5G14000.2 34.286 140 86 3 12 147 13 150 9.55e-17 76.6
Msa1190520 AT3G55210.1 31.707 164 90 5 14 162 11 167 1.02e-16 79.3
Msa1190520 AT5G22290.2 37.288 118 55 5 93 200 2 110 5.33e-14 70.9
Msa1190520 AT4G29230.2 30.921 152 80 4 12 139 45 195 1.31e-12 68.9
Msa1190520 AT3G04430.1 35.606 132 71 5 20 138 6 136 2.46e-12 65.5
Msa1190520 AT5G56620.3 33.974 156 73 8 12 139 41 194 4.44e-12 67.0
Msa1190520 AT5G56620.2 33.974 156 73 8 12 139 41 194 5.02e-12 66.6
Msa1190520 AT1G28470.1 31.944 144 79 6 13 139 76 217 9.44e-12 65.5
Msa1190520 AT5G56620.1 33.974 156 73 8 12 139 41 194 1.11e-11 65.5
Msa1190520 AT4G28500.1 36.806 144 71 7 14 139 59 200 1.12e-11 65.1

Find 129 sgRNAs with CRISPR-Local

Find 324 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCATTCGGGTTTGGGTATT+CGG 0.143694 8_1:-33560692 Msa1190520:CDS
CTCTTCGTCGGTGGGGTTCT+TGG 0.156808 8_1:+33560804 None:intergenic
CAACTTTGCATGACATTATT+TGG 0.163219 8_1:-33560188 Msa1190520:three_prime_UTR
GAGTTGCTGGTTCTGGTTAC+TGG 0.209450 8_1:-33561477 Msa1190520:CDS
GGTGCAGGCAAGGCGAATTT+TGG 0.246467 8_1:-33561565 Msa1190520:intron
TTGGGTGACCCATTCGGGTT+TGG 0.254210 8_1:-33560700 Msa1190520:CDS
CAGCCGCAATATTTGTGTTT+AGG 0.271045 8_1:+33560121 None:intergenic
TGACATTATTTGGCTGTATC+AGG 0.273619 8_1:-33560178 Msa1190520:three_prime_UTR
AGAACCATTGCTGCATTCTT+TGG 0.294749 8_1:+33561122 None:intergenic
TTTGTTGTGACTTAAGTTTA+AGG 0.298237 8_1:+33560518 None:intergenic
GCAAATAATTGGTGATTCTT+TGG 0.308472 8_1:-33560404 Msa1190520:three_prime_UTR
TTTGATCCTTGGGTTCTTCC+AGG 0.310994 8_1:-33561891 Msa1190520:intron
TGGGTGACCCATTCGGGTTT+GGG 0.316078 8_1:-33560699 Msa1190520:CDS
CTTGTACAAGTTTGATCCTT+GGG 0.318790 8_1:-33561901 Msa1190520:CDS
ATTGAATCCTCACCGGAGTT+TGG 0.319990 8_1:-33560925 Msa1190520:CDS
CCAAACAGAGTTGCTGGTTC+TGG 0.323652 8_1:-33561484 Msa1190520:CDS
CTCAATGACCGACCAGTATA+CGG 0.325756 8_1:+33560264 None:intergenic
CATGCCTATGTGCAAATAAT+TGG 0.333595 8_1:-33560415 Msa1190520:three_prime_UTR
AAGTCAATTTCAGCAATAAT+TGG 0.338246 8_1:+33561921 None:intergenic
TTGTTAAGTTTCATCATAAT+GGG 0.344250 8_1:-33562068 Msa1190520:exon
TTTGTTAAGTTTCATCATAA+TGG 0.350596 8_1:-33562069 Msa1190520:exon
CGAAATGTTGGACTCGTTCC+TGG 0.353931 8_1:-33561073 Msa1190520:CDS
CTGTTTGGTCTAGAACCATT+TGG 0.354289 8_1:+33561499 None:intergenic
TCGGGCTTGGGTGACCCATT+CGG 0.355450 8_1:-33560706 Msa1190520:CDS
GTATTCGGGTCATTAATTAT+AGG 0.357795 8_1:-33560677 Msa1190520:exon
TTATGTTGATATAAACTAGA+AGG 0.363334 8_1:+33560745 None:intergenic
CCATTCGGGTTTGGGTATTC+GGG 0.363965 8_1:-33560691 Msa1190520:CDS
TTGAAGATTCTCGTTTAATT+CGG 0.364788 8_1:+33560588 None:intergenic
AGCTCTGATCATCAATTTCC+AGG 0.378659 8_1:+33561055 None:intergenic
CTTTGAACCTCTTCGTCGGT+GGG 0.389977 8_1:+33560796 None:intergenic
AGAAAGGCAAAACATAGTTT+TGG 0.391206 8_1:-33560337 Msa1190520:three_prime_UTR
TGGCTGTATCAGGAACATTT+CGG 0.395631 8_1:-33560168 Msa1190520:three_prime_UTR
TATCTATGTCGTAAAGTTGC+AGG 0.400628 8_1:-33561960 Msa1190520:CDS
GTGAAGGATTGGTTTGGTTA+TGG 0.402318 8_1:-33560372 Msa1190520:three_prime_UTR
CATTCTTTGGTTGAAAATGT+TGG 0.404347 8_1:+33561135 None:intergenic
TTTGGATATTTCCTGTCCCT+TGG 0.404470 8_1:+33561517 None:intergenic
TCTCCTCTTGCTGTAGCATT+CGG 0.405277 8_1:+33561007 None:intergenic
AAAGCAGCATGAGGACTAAC+CGG 0.407018 8_1:-33560777 Msa1190520:CDS
TCCTCACCGGAGTTTGGATT+AGG 0.414541 8_1:-33560919 Msa1190520:CDS
CGTGCCACCGTTTGGTAACA+TGG 0.418390 8_1:-33560842 Msa1190520:CDS
TTTGGTCCTTGTGGATGTTA+CGG 0.420562 8_1:-33560319 Msa1190520:three_prime_UTR
CCAGAACCAGCAACTCTGTT+TGG 0.423168 8_1:+33561484 None:intergenic
TCTAGACCAAACAGAGTTGC+TGG 0.423965 8_1:-33561490 Msa1190520:CDS
ATTGATGCAGCTTGATGATT+GGG 0.428244 8_1:-33561205 Msa1190520:intron
GGTCATTGAGAAAGTAACTA+TGG 0.432977 8_1:-33560251 Msa1190520:three_prime_UTR
TATTGATGCAGCTTGATGAT+TGG 0.443903 8_1:-33561206 Msa1190520:intron
TATACAATGAATCCGTATAC+TGG 0.444121 8_1:-33560276 Msa1190520:three_prime_UTR
TGGATTAGGAAACCAGAGTC+AGG 0.444473 8_1:-33560905 Msa1190520:CDS
ACTTGTACAAGTTTGATCCT+TGG 0.451700 8_1:-33561902 Msa1190520:CDS
CTACAGCAAGAGGAGAAGTT+CGG 0.456841 8_1:-33561000 Msa1190520:CDS
AGAATCTTCAATGATGATGA+TGG 0.457135 8_1:-33560576 Msa1190520:three_prime_UTR
GGTTATTCAATGTGAAGGAT+TGG 0.457724 8_1:-33560383 Msa1190520:three_prime_UTR
TACAGCAAGAGGAGAAGTTC+GGG 0.459516 8_1:-33560999 Msa1190520:CDS
TTCAATGTGAAGGATTGGTT+TGG 0.462734 8_1:-33560378 Msa1190520:three_prime_UTR
CTACGATTGACACATATGAT+AGG 0.465988 8_1:+33560481 None:intergenic
GTTCCTTCCGTGCCACCGTT+TGG 0.466910 8_1:-33560850 Msa1190520:CDS
AACAAGAAGCTCTTCATCAG+TGG 0.469107 8_1:+33561986 None:intergenic
GTGACTTAAGTTTAAGGCTA+GGG 0.470713 8_1:+33560524 None:intergenic
GGGTTTCACAACATGGGTGC+TGG 0.473359 8_1:-33560979 Msa1190520:CDS
ACAACTGAAGGTAGAAAAGT+TGG 0.474990 8_1:-33561427 Msa1190520:CDS
TTCGCCTTCATCGTCGTCCC+AGG 0.477914 8_1:-33561100 Msa1190520:CDS
GCTTTGAACCTCTTCGTCGG+TGG 0.485096 8_1:+33560795 None:intergenic
CCGAATACCCAAACCCGAAT+GGG 0.486952 8_1:+33560692 None:intergenic
TGTGAAAGAGGATCTCTCTC+TGG 0.490458 8_1:+33562041 None:intergenic
GTTTGGTAACATGGACTTGT+CGG 0.491871 8_1:-33560833 Msa1190520:CDS
AACTAGAAGGGTCGGTGACC+CGG 0.495029 8_1:+33560758 None:intergenic
AGTCAGGGGATGCTGAATTA+CGG 0.495349 8_1:-33560889 Msa1190520:CDS
GCTTCGCGAAAACACAATCT+TGG 0.501596 8_1:-33561316 Msa1190520:CDS
TGTGACTTAAGTTTAAGGCT+AGG 0.502356 8_1:+33560523 None:intergenic
GAAGTTCGGGTTTCACAACA+TGG 0.506769 8_1:-33560986 Msa1190520:CDS
TATATTGGCAAAGCACCAAA+AGG 0.512258 8_1:-33561382 Msa1190520:CDS
GGTAAACTCAACTGTGAAAG+AGG 0.512342 8_1:+33562029 None:intergenic
CTATCATATGTGTCAATCGT+AGG 0.514871 8_1:-33560480 Msa1190520:three_prime_UTR
ATTTCTTCAGTCCAAGGGAC+AGG 0.517559 8_1:-33561528 Msa1190520:CDS
AATTCAGCATCCCCTGACTC+TGG 0.524401 8_1:+33560893 None:intergenic
GACAAAATTATCACAACTGA+AGG 0.526909 8_1:-33561439 Msa1190520:CDS
AGTCCAACATTTCGTCCACC+TGG 0.531736 8_1:+33561082 None:intergenic
TCTTTGGTTATTCAATGTGA+AGG 0.535339 8_1:-33560388 Msa1190520:three_prime_UTR
TCAACCAAAGAATGCAGCAA+TGG 0.536044 8_1:-33561126 Msa1190520:CDS
CCCGAATACCCAAACCCGAA+TGG 0.543082 8_1:+33560691 None:intergenic
GTGAGGATTCAATATCTGTC+GGG 0.549879 8_1:+33560935 None:intergenic
ATGGTAACCCAAAAGTAGAA+AGG 0.551380 8_1:-33560353 Msa1190520:three_prime_UTR
ACAAGAAGCTCTTCATCAGT+GGG 0.551403 8_1:+33561987 None:intergenic
ATCAGAGCTTTGCATTGCCG+CGG 0.552759 8_1:-33561041 Msa1190520:CDS
GTCCCAGGTGGACGAAATGT+TGG 0.553604 8_1:-33561085 Msa1190520:CDS
AATGGTATTTCTTCAGTCCA+AGG 0.554883 8_1:-33561534 Msa1190520:CDS
GCTGCTTTGAACCTCTTCGT+CGG 0.558434 8_1:+33560792 None:intergenic
TTGATATAAACTAGAAGGGT+CGG 0.560325 8_1:+33560750 None:intergenic
TCCACCTGGGACGACGATGA+AGG 0.560826 8_1:+33561096 None:intergenic
GGTGAGGATTCAATATCTGT+CGG 0.563156 8_1:+33560934 None:intergenic
TATGTTGATATAAACTAGAA+GGG 0.564471 8_1:+33560746 None:intergenic
ATATGTGTCAATCGTAGGGT+TGG 0.566804 8_1:-33560475 Msa1190520:three_prime_UTR
AAGCAGCATGAGGACTAACC+GGG 0.566841 8_1:-33560776 Msa1190520:CDS
GACAAGTCCATGTTACCAAA+CGG 0.568350 8_1:+33560835 None:intergenic
ACTCCGAATGCTACAGCAAG+AGG 0.568493 8_1:-33561010 Msa1190520:CDS
TCAGAGCTTTGCATTGCCGC+GGG 0.574657 8_1:-33561040 Msa1190520:CDS
TATCATATGTGTCAATCGTA+GGG 0.575496 8_1:-33560479 Msa1190520:three_prime_UTR
TTTGAACCTCTTCGTCGGTG+GGG 0.576389 8_1:+33560797 None:intergenic
TTACCAAACGGTGGCACGGA+AGG 0.576728 8_1:+33560847 None:intergenic
ATCACCAATTATTTGCACAT+AGG 0.581314 8_1:+33560411 None:intergenic
GGATTAGGAAACCAGAGTCA+GGG 0.583546 8_1:-33560904 Msa1190520:CDS
CAAGAACCCCACCGACGAAG+AGG 0.586414 8_1:-33560803 Msa1190520:CDS
TAGGTACAACGTGTTTAATG+TGG 0.587386 8_1:+33560140 None:intergenic
ATGGTATTTCTTCAGTCCAA+GGG 0.588129 8_1:-33561533 Msa1190520:CDS
TTGAGAAAGTAACTATGGAC+TGG 0.590760 8_1:-33560246 Msa1190520:three_prime_UTR
AGGGACAGGAAATATCCAAA+TGG 0.592563 8_1:-33561514 Msa1190520:CDS
TCTGGTTACTGGAAAGCCAC+AGG 0.607999 8_1:-33561466 Msa1190520:CDS
GCCTTCATCGTCGTCCCAGG+TGG 0.609301 8_1:-33561097 Msa1190520:CDS
TGGTAACATGGACTTGTCGG+TGG 0.609540 8_1:-33560830 Msa1190520:CDS
CATGTTACCAAACGGTGGCA+CGG 0.615690 8_1:+33560843 None:intergenic
GTCCAACATTTCGTCCACCT+GGG 0.623948 8_1:+33561083 None:intergenic
TAATTACCTGGAAGAACCCA+AGG 0.624355 8_1:+33561885 None:intergenic
GTATCAGGAACATTTCGGCT+CGG 0.624906 8_1:-33560163 Msa1190520:three_prime_UTR
GTACCTAAACACAAATATTG+CGG 0.624934 8_1:-33560124 Msa1190520:three_prime_UTR
GACAGATATTGAATCCTCAC+CGG 0.626126 8_1:-33560932 Msa1190520:CDS
TCCTTGTGGATGTTACGGAA+TGG 0.637652 8_1:-33560314 Msa1190520:three_prime_UTR
GATTAGGAAACCAGAGTCAG+GGG 0.641898 8_1:-33560903 Msa1190520:CDS
AAGAGGTTCAAAGCAGCATG+AGG 0.648245 8_1:-33560786 Msa1190520:CDS
CAATGAATCCGTATACTGGT+CGG 0.649423 8_1:-33560272 Msa1190520:three_prime_UTR
GTGGGGAAGAATCTGAAACC+AGG 0.652605 8_1:+33562005 None:intergenic
TCACAGTTGAGTTTACCACC+TGG 0.654718 8_1:-33562023 Msa1190520:CDS
TGGTTTCCTAATCCAAACTC+CGG 0.659176 8_1:+33560913 None:intergenic
TCCTAATCCAAACTCCGGTG+AGG 0.662436 8_1:+33560918 None:intergenic
AAGTTCGGGTTTCACAACAT+GGG 0.678618 8_1:-33560985 Msa1190520:CDS
TCCATTCCGTAACATCCACA+AGG 0.689905 8_1:+33560313 None:intergenic
ATTCGGAGTGATGTTACCCG+CGG 0.710388 8_1:+33561024 None:intergenic
AAGTCCATGTTACCAAACGG+TGG 0.730264 8_1:+33560838 None:intergenic
CAAGAAGCTCTTCATCAGTG+GGG 0.738513 8_1:+33561988 None:intergenic
GGGAAGAATCTGAAACCAGG+TGG 0.741808 8_1:+33562008 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAATAATGTATTTTTATC+GGG - chr8_1:33561407-33561426 Msa1190520:CDS 10.0%
!!! AATAATAATGTATTTTTATC+GGG - chr8_1:33561407-33561426 Msa1190520:CDS 10.0%
!!! CAATTTTAATATTGTTGTTA+TGG - chr8_1:33560539-33560558 Msa1190520:three_prime_UTR 15.0%
!!! TTGTTTTTGTTTCTTTTTTT+GGG + chr8_1:33559990-33560009 None:intergenic 15.0%
!!! TTTGTTTTTGTTTCTTTTTT+TGG + chr8_1:33559991-33560010 None:intergenic 15.0%
!!! CAATTTTAATATTGTTGTTA+TGG - chr8_1:33560539-33560558 Msa1190520:three_prime_UTR 15.0%
!! TTTGTTAAGTTTCATCATAA+TGG - chr8_1:33560062-33560081 Msa1190520:three_prime_UTR 20.0%
!! TTGTTAAGTTTCATCATAAT+GGG - chr8_1:33560063-33560082 Msa1190520:three_prime_UTR 20.0%
!!! TAATATTGTTGTTATGGTTT+TGG - chr8_1:33560545-33560564 Msa1190520:three_prime_UTR 20.0%
!! TATGTTGATATAAACTAGAA+GGG + chr8_1:33561388-33561407 None:intergenic 20.0%
!! TTATGTTGATATAAACTAGA+AGG + chr8_1:33561389-33561408 None:intergenic 20.0%
!! TATGTGTAATATACAAAAAG+AGG - chr8_1:33561582-33561601 Msa1190520:intron 20.0%
!! TTTGTTAAGTTTCATCATAA+TGG - chr8_1:33560062-33560081 Msa1190520:three_prime_UTR 20.0%
!! TTGTTAAGTTTCATCATAAT+GGG - chr8_1:33560063-33560082 Msa1190520:three_prime_UTR 20.0%
!!! TAATATTGTTGTTATGGTTT+TGG - chr8_1:33560545-33560564 Msa1190520:three_prime_UTR 20.0%
!! TATGTTGATATAAACTAGAA+GGG + chr8_1:33561388-33561407 None:intergenic 20.0%
!! TTATGTTGATATAAACTAGA+AGG + chr8_1:33561389-33561408 None:intergenic 20.0%
!! TATGTGTAATATACAAAAAG+AGG - chr8_1:33561582-33561601 Msa1190520:intron 20.0%
! AAGTCAATTTCAGCAATAAT+TGG + chr8_1:33560213-33560232 None:intergenic 25.0%
! CTGAAATTCTGACAATAATA+CGG - chr8_1:33560426-33560445 Msa1190520:three_prime_UTR 25.0%
!!! AAAGCACTTGTTTTCTATAT+TGG - chr8_1:33560734-33560753 Msa1190520:CDS 25.0%
!!! CAATTAGTTTTTGTTCCTTT+TGG + chr8_1:33560767-33560786 None:intergenic 25.0%
! CAAAAGGAACAAAAACTAAT+TGG - chr8_1:33560765-33560784 Msa1190520:CDS 25.0%
! TTGAAGATTCTCGTTTAATT+CGG + chr8_1:33561546-33561565 None:intergenic 25.0%
!! TTTGTTGTGACTTAAGTTTA+AGG + chr8_1:33561616-33561635 None:intergenic 25.0%
! AAGTCAATTTCAGCAATAAT+TGG + chr8_1:33560213-33560232 None:intergenic 25.0%
! CTGAAATTCTGACAATAATA+CGG - chr8_1:33560426-33560445 Msa1190520:three_prime_UTR 25.0%
!!! AAAGCACTTGTTTTCTATAT+TGG - chr8_1:33560734-33560753 Msa1190520:CDS 25.0%
!!! CAATTAGTTTTTGTTCCTTT+TGG + chr8_1:33560767-33560786 None:intergenic 25.0%
! CAAAAGGAACAAAAACTAAT+TGG - chr8_1:33560765-33560784 Msa1190520:CDS 25.0%
! TTGAAGATTCTCGTTTAATT+CGG + chr8_1:33561546-33561565 None:intergenic 25.0%
!! TTTGTTGTGACTTAAGTTTA+AGG + chr8_1:33561616-33561635 None:intergenic 25.0%
! CTAAATTGGTGATAATTACC+TGG + chr8_1:33560261-33560280 None:intergenic 30.0%
CAGGTAATTATCACCAATTT+AGG - chr8_1:33560259-33560278 Msa1190520:three_prime_UTR 30.0%
TAACTATTGCAAAATCACAG+TGG + chr8_1:33560373-33560392 None:intergenic 30.0%
GACAAAATTATCACAACTGA+AGG - chr8_1:33560692-33560711 Msa1190520:CDS 30.0%
CTCATCAATAAAAATGAGCA+AGG + chr8_1:33560877-33560896 None:intergenic 30.0%
CATTCTTTGGTTGAAAATGT+TGG + chr8_1:33560999-33561018 None:intergenic 30.0%
TTGATATAAACTAGAAGGGT+CGG + chr8_1:33561384-33561403 None:intergenic 30.0%
!! TAATGTATTTTTATCGGGCT+TGG - chr8_1:33561412-33561431 Msa1190520:CDS 30.0%
!! AATGTATTTTTATCGGGCTT+GGG - chr8_1:33561413-33561432 Msa1190520:CDS 30.0%
GTATTCGGGTCATTAATTAT+AGG - chr8_1:33561454-33561473 Msa1190520:CDS 30.0%
! AGAATCTTCAATGATGATGA+TGG - chr8_1:33561555-33561574 Msa1190520:CDS 30.0%
TATCATATGTGTCAATCGTA+GGG - chr8_1:33561652-33561671 Msa1190520:intron 30.0%
ATCACCAATTATTTGCACAT+AGG + chr8_1:33561723-33561742 None:intergenic 30.0%
! GCAAATAATTGGTGATTCTT+TGG - chr8_1:33561727-33561746 Msa1190520:intron 30.0%
TCTTTGGTTATTCAATGTGA+AGG - chr8_1:33561743-33561762 Msa1190520:intron 30.0%
!! TGTTTTGCCTTTCTACTTTT+GGG + chr8_1:33561788-33561807 None:intergenic 30.0%
! ATGTTTTGCCTTTCTACTTT+TGG + chr8_1:33561789-33561808 None:intergenic 30.0%
! AGAAAGGCAAAACATAGTTT+TGG - chr8_1:33561794-33561813 Msa1190520:intron 30.0%
TATACAATGAATCCGTATAC+TGG - chr8_1:33561855-33561874 Msa1190520:intron 30.0%
CAACTTTGCATGACATTATT+TGG - chr8_1:33561943-33561962 Msa1190520:CDS 30.0%
GTACCTAAACACAAATATTG+CGG - chr8_1:33562007-33562026 Msa1190520:CDS 30.0%
! CTAAATTGGTGATAATTACC+TGG + chr8_1:33560261-33560280 None:intergenic 30.0%
CAGGTAATTATCACCAATTT+AGG - chr8_1:33560259-33560278 Msa1190520:three_prime_UTR 30.0%
TAACTATTGCAAAATCACAG+TGG + chr8_1:33560373-33560392 None:intergenic 30.0%
GACAAAATTATCACAACTGA+AGG - chr8_1:33560692-33560711 Msa1190520:CDS 30.0%
CTCATCAATAAAAATGAGCA+AGG + chr8_1:33560877-33560896 None:intergenic 30.0%
CATTCTTTGGTTGAAAATGT+TGG + chr8_1:33560999-33561018 None:intergenic 30.0%
TTGATATAAACTAGAAGGGT+CGG + chr8_1:33561384-33561403 None:intergenic 30.0%
!! TAATGTATTTTTATCGGGCT+TGG - chr8_1:33561412-33561431 Msa1190520:CDS 30.0%
!! AATGTATTTTTATCGGGCTT+GGG - chr8_1:33561413-33561432 Msa1190520:CDS 30.0%
GTATTCGGGTCATTAATTAT+AGG - chr8_1:33561454-33561473 Msa1190520:CDS 30.0%
! AGAATCTTCAATGATGATGA+TGG - chr8_1:33561555-33561574 Msa1190520:CDS 30.0%
TATCATATGTGTCAATCGTA+GGG - chr8_1:33561652-33561671 Msa1190520:intron 30.0%
ATCACCAATTATTTGCACAT+AGG + chr8_1:33561723-33561742 None:intergenic 30.0%
! GCAAATAATTGGTGATTCTT+TGG - chr8_1:33561727-33561746 Msa1190520:intron 30.0%
TCTTTGGTTATTCAATGTGA+AGG - chr8_1:33561743-33561762 Msa1190520:intron 30.0%
!! TGTTTTGCCTTTCTACTTTT+GGG + chr8_1:33561788-33561807 None:intergenic 30.0%
! ATGTTTTGCCTTTCTACTTT+TGG + chr8_1:33561789-33561808 None:intergenic 30.0%
! AGAAAGGCAAAACATAGTTT+TGG - chr8_1:33561794-33561813 Msa1190520:intron 30.0%
TATACAATGAATCCGTATAC+TGG - chr8_1:33561855-33561874 Msa1190520:intron 30.0%
CAACTTTGCATGACATTATT+TGG - chr8_1:33561943-33561962 Msa1190520:CDS 30.0%
GTACCTAAACACAAATATTG+CGG - chr8_1:33562007-33562026 Msa1190520:CDS 30.0%
TATCTATGTCGTAAAGTTGC+AGG - chr8_1:33560171-33560190 Msa1190520:three_prime_UTR 35.0%
ACTTGTACAAGTTTGATCCT+TGG - chr8_1:33560229-33560248 Msa1190520:three_prime_UTR 35.0%
CTTGTACAAGTTTGATCCTT+GGG - chr8_1:33560230-33560249 Msa1190520:three_prime_UTR 35.0%
TCTGCAATTGCAACCTAAAT+TGG + chr8_1:33560275-33560294 None:intergenic 35.0%
!! CGAATTTTGGTGAGAAAGAA+TGG - chr8_1:33560579-33560598 Msa1190520:three_prime_UTR 35.0%
AATGGTATTTCTTCAGTCCA+AGG - chr8_1:33560597-33560616 Msa1190520:three_prime_UTR 35.0%
ATGGTATTTCTTCAGTCCAA+GGG - chr8_1:33560598-33560617 Msa1190520:three_prime_UTR 35.0%
! GATAATTTTGTCTGTTCCTG+TGG + chr8_1:33560684-33560703 None:intergenic 35.0%
ACAACTGAAGGTAGAAAAGT+TGG - chr8_1:33560704-33560723 Msa1190520:CDS 35.0%
! TATATTGGCAAAGCACCAAA+AGG - chr8_1:33560749-33560768 Msa1190520:CDS 35.0%
! TATTGATGCAGCTTGATGAT+TGG - chr8_1:33560925-33560944 Msa1190520:CDS 35.0%
! ATTGATGCAGCTTGATGATT+GGG - chr8_1:33560926-33560945 Msa1190520:CDS 35.0%
! GTGACTTAAGTTTAAGGCTA+GGG + chr8_1:33561610-33561629 None:intergenic 35.0%
! TGTGACTTAAGTTTAAGGCT+AGG + chr8_1:33561611-33561630 None:intergenic 35.0%
CTACGATTGACACATATGAT+AGG + chr8_1:33561653-33561672 None:intergenic 35.0%
CTATCATATGTGTCAATCGT+AGG - chr8_1:33561651-33561670 Msa1190520:intron 35.0%
CATGCCTATGTGCAAATAAT+TGG - chr8_1:33561716-33561735 Msa1190520:intron 35.0%
GGTTATTCAATGTGAAGGAT+TGG - chr8_1:33561748-33561767 Msa1190520:intron 35.0%
!! TTCAATGTGAAGGATTGGTT+TGG - chr8_1:33561753-33561772 Msa1190520:intron 35.0%
ATGGTAACCCAAAAGTAGAA+AGG - chr8_1:33561778-33561797 Msa1190520:intron 35.0%
!!! AAACATAGTTTTGGTCCTTG+TGG - chr8_1:33561803-33561822 Msa1190520:intron 35.0%
GGTCATTGAGAAAGTAACTA+TGG - chr8_1:33561880-33561899 Msa1190520:intron 35.0%
TTGAGAAAGTAACTATGGAC+TGG - chr8_1:33561885-33561904 Msa1190520:intron 35.0%
!! GAGAACTACTTTTCAGCAAT+GGG + chr8_1:33561919-33561938 None:intergenic 35.0%
!! AGAGAACTACTTTTCAGCAA+TGG + chr8_1:33561920-33561939 None:intergenic 35.0%
TGACATTATTTGGCTGTATC+AGG - chr8_1:33561953-33561972 Msa1190520:CDS 35.0%
TAGGTACAACGTGTTTAATG+TGG + chr8_1:33561994-33562013 None:intergenic 35.0%
TATCTATGTCGTAAAGTTGC+AGG - chr8_1:33560171-33560190 Msa1190520:three_prime_UTR 35.0%
ACTTGTACAAGTTTGATCCT+TGG - chr8_1:33560229-33560248 Msa1190520:three_prime_UTR 35.0%
CTTGTACAAGTTTGATCCTT+GGG - chr8_1:33560230-33560249 Msa1190520:three_prime_UTR 35.0%
TCTGCAATTGCAACCTAAAT+TGG + chr8_1:33560275-33560294 None:intergenic 35.0%
!! CGAATTTTGGTGAGAAAGAA+TGG - chr8_1:33560579-33560598 Msa1190520:three_prime_UTR 35.0%
AATGGTATTTCTTCAGTCCA+AGG - chr8_1:33560597-33560616 Msa1190520:three_prime_UTR 35.0%
ATGGTATTTCTTCAGTCCAA+GGG - chr8_1:33560598-33560617 Msa1190520:three_prime_UTR 35.0%
! GATAATTTTGTCTGTTCCTG+TGG + chr8_1:33560684-33560703 None:intergenic 35.0%
ACAACTGAAGGTAGAAAAGT+TGG - chr8_1:33560704-33560723 Msa1190520:CDS 35.0%
! TATATTGGCAAAGCACCAAA+AGG - chr8_1:33560749-33560768 Msa1190520:CDS 35.0%
! TATTGATGCAGCTTGATGAT+TGG - chr8_1:33560925-33560944 Msa1190520:CDS 35.0%
! ATTGATGCAGCTTGATGATT+GGG - chr8_1:33560926-33560945 Msa1190520:CDS 35.0%
! GTGACTTAAGTTTAAGGCTA+GGG + chr8_1:33561610-33561629 None:intergenic 35.0%
! TGTGACTTAAGTTTAAGGCT+AGG + chr8_1:33561611-33561630 None:intergenic 35.0%
CTACGATTGACACATATGAT+AGG + chr8_1:33561653-33561672 None:intergenic 35.0%
CTATCATATGTGTCAATCGT+AGG - chr8_1:33561651-33561670 Msa1190520:intron 35.0%
CATGCCTATGTGCAAATAAT+TGG - chr8_1:33561716-33561735 Msa1190520:intron 35.0%
GGTTATTCAATGTGAAGGAT+TGG - chr8_1:33561748-33561767 Msa1190520:intron 35.0%
!! TTCAATGTGAAGGATTGGTT+TGG - chr8_1:33561753-33561772 Msa1190520:intron 35.0%
ATGGTAACCCAAAAGTAGAA+AGG - chr8_1:33561778-33561797 Msa1190520:intron 35.0%
!!! AAACATAGTTTTGGTCCTTG+TGG - chr8_1:33561803-33561822 Msa1190520:intron 35.0%
GGTCATTGAGAAAGTAACTA+TGG - chr8_1:33561880-33561899 Msa1190520:intron 35.0%
TTGAGAAAGTAACTATGGAC+TGG - chr8_1:33561885-33561904 Msa1190520:intron 35.0%
!! GAGAACTACTTTTCAGCAAT+GGG + chr8_1:33561919-33561938 None:intergenic 35.0%
!! AGAGAACTACTTTTCAGCAA+TGG + chr8_1:33561920-33561939 None:intergenic 35.0%
TGACATTATTTGGCTGTATC+AGG - chr8_1:33561953-33561972 Msa1190520:CDS 35.0%
TAGGTACAACGTGTTTAATG+TGG + chr8_1:33561994-33562013 None:intergenic 35.0%
GGTAAACTCAACTGTGAAAG+AGG + chr8_1:33560105-33560124 None:intergenic 40.0%
ACAAGAAGCTCTTCATCAGT+GGG + chr8_1:33560147-33560166 None:intergenic 40.0%
AACAAGAAGCTCTTCATCAG+TGG + chr8_1:33560148-33560167 None:intergenic 40.0%
TAATTACCTGGAAGAACCCA+AGG + chr8_1:33560249-33560268 None:intergenic 40.0%
CCGTGATTCTGACAAACTTA+CGG + chr8_1:33560346-33560365 None:intergenic 40.0%
CCGTAAGTTTGTCAGAATCA+CGG - chr8_1:33560343-33560362 Msa1190520:three_prime_UTR 40.0%
!!! TGTTGTTATGGTTTTGGTGC+AGG - chr8_1:33560551-33560570 Msa1190520:three_prime_UTR 40.0%
TTTGGATATTTCCTGTCCCT+TGG + chr8_1:33560617-33560636 None:intergenic 40.0%
AGGGACAGGAAATATCCAAA+TGG - chr8_1:33560617-33560636 Msa1190520:three_prime_UTR 40.0%
! CTGTTTGGTCTAGAACCATT+TGG + chr8_1:33560635-33560654 None:intergenic 40.0%
GAAAAACTCAAGCTCGCAAA+AGG - chr8_1:33560968-33560987 Msa1190520:CDS 40.0%
TCAACCAAAGAATGCAGCAA+TGG - chr8_1:33561005-33561024 Msa1190520:CDS 40.0%
AGAACCATTGCTGCATTCTT+TGG + chr8_1:33561012-33561031 None:intergenic 40.0%
! AGCTCTGATCATCAATTTCC+AGG + chr8_1:33561079-33561098 None:intergenic 40.0%
! AAGTTCGGGTTTCACAACAT+GGG - chr8_1:33561146-33561165 Msa1190520:CDS 40.0%
! TGCTGGACTTTTCTCTGATT+GGG - chr8_1:33561169-33561188 Msa1190520:CDS 40.0%
GTGAGGATTCAATATCTGTC+GGG + chr8_1:33561199-33561218 None:intergenic 40.0%
GGTGAGGATTCAATATCTGT+CGG + chr8_1:33561200-33561219 None:intergenic 40.0%
GACAGATATTGAATCCTCAC+CGG - chr8_1:33561199-33561218 Msa1190520:intron 40.0%
TGGTTTCCTAATCCAAACTC+CGG + chr8_1:33561221-33561240 None:intergenic 40.0%
GACAAGTCCATGTTACCAAA+CGG + chr8_1:33561299-33561318 None:intergenic 40.0%
! GTTTGGTAACATGGACTTGT+CGG - chr8_1:33561298-33561317 Msa1190520:intron 40.0%
ATATGTGTCAATCGTAGGGT+TGG - chr8_1:33561656-33561675 Msa1190520:intron 40.0%
!! GTGAAGGATTGGTTTGGTTA+TGG - chr8_1:33561759-33561778 Msa1190520:intron 40.0%
TTTGGTCCTTGTGGATGTTA+CGG - chr8_1:33561812-33561831 Msa1190520:intron 40.0%
CAATGAATCCGTATACTGGT+CGG - chr8_1:33561859-33561878 Msa1190520:intron 40.0%
TGGCTGTATCAGGAACATTT+CGG - chr8_1:33561963-33561982 Msa1190520:CDS 40.0%
CAGCCGCAATATTTGTGTTT+AGG + chr8_1:33562013-33562032 None:intergenic 40.0%
!!! GCGGCTGTTTTTCAAAAGTT+TGG - chr8_1:33562026-33562045 Msa1190520:CDS 40.0%
GGTAAACTCAACTGTGAAAG+AGG + chr8_1:33560105-33560124 None:intergenic 40.0%
ACAAGAAGCTCTTCATCAGT+GGG + chr8_1:33560147-33560166 None:intergenic 40.0%
AACAAGAAGCTCTTCATCAG+TGG + chr8_1:33560148-33560167 None:intergenic 40.0%
TAATTACCTGGAAGAACCCA+AGG + chr8_1:33560249-33560268 None:intergenic 40.0%
CCGTGATTCTGACAAACTTA+CGG + chr8_1:33560346-33560365 None:intergenic 40.0%
CCGTAAGTTTGTCAGAATCA+CGG - chr8_1:33560343-33560362 Msa1190520:three_prime_UTR 40.0%
!!! TGTTGTTATGGTTTTGGTGC+AGG - chr8_1:33560551-33560570 Msa1190520:three_prime_UTR 40.0%
TTTGGATATTTCCTGTCCCT+TGG + chr8_1:33560617-33560636 None:intergenic 40.0%
AGGGACAGGAAATATCCAAA+TGG - chr8_1:33560617-33560636 Msa1190520:three_prime_UTR 40.0%
! CTGTTTGGTCTAGAACCATT+TGG + chr8_1:33560635-33560654 None:intergenic 40.0%
GAAAAACTCAAGCTCGCAAA+AGG - chr8_1:33560968-33560987 Msa1190520:CDS 40.0%
TCAACCAAAGAATGCAGCAA+TGG - chr8_1:33561005-33561024 Msa1190520:CDS 40.0%
AGAACCATTGCTGCATTCTT+TGG + chr8_1:33561012-33561031 None:intergenic 40.0%
! AGCTCTGATCATCAATTTCC+AGG + chr8_1:33561079-33561098 None:intergenic 40.0%
! AAGTTCGGGTTTCACAACAT+GGG - chr8_1:33561146-33561165 Msa1190520:CDS 40.0%
! TGCTGGACTTTTCTCTGATT+GGG - chr8_1:33561169-33561188 Msa1190520:CDS 40.0%
GTGAGGATTCAATATCTGTC+GGG + chr8_1:33561199-33561218 None:intergenic 40.0%
GGTGAGGATTCAATATCTGT+CGG + chr8_1:33561200-33561219 None:intergenic 40.0%
GACAGATATTGAATCCTCAC+CGG - chr8_1:33561199-33561218 Msa1190520:intron 40.0%
TGGTTTCCTAATCCAAACTC+CGG + chr8_1:33561221-33561240 None:intergenic 40.0%
GACAAGTCCATGTTACCAAA+CGG + chr8_1:33561299-33561318 None:intergenic 40.0%
! GTTTGGTAACATGGACTTGT+CGG - chr8_1:33561298-33561317 Msa1190520:intron 40.0%
ATATGTGTCAATCGTAGGGT+TGG - chr8_1:33561656-33561675 Msa1190520:intron 40.0%
!! GTGAAGGATTGGTTTGGTTA+TGG - chr8_1:33561759-33561778 Msa1190520:intron 40.0%
TTTGGTCCTTGTGGATGTTA+CGG - chr8_1:33561812-33561831 Msa1190520:intron 40.0%
CAATGAATCCGTATACTGGT+CGG - chr8_1:33561859-33561878 Msa1190520:intron 40.0%
TGGCTGTATCAGGAACATTT+CGG - chr8_1:33561963-33561982 Msa1190520:CDS 40.0%
CAGCCGCAATATTTGTGTTT+AGG + chr8_1:33562013-33562032 None:intergenic 40.0%
!!! GCGGCTGTTTTTCAAAAGTT+TGG - chr8_1:33562026-33562045 Msa1190520:CDS 40.0%
TGTGAAAGAGGATCTCTCTC+TGG + chr8_1:33560093-33560112 None:intergenic 45.0%
TCACAGTTGAGTTTACCACC+TGG - chr8_1:33560108-33560127 Msa1190520:three_prime_UTR 45.0%
CAAGAAGCTCTTCATCAGTG+GGG + chr8_1:33560146-33560165 None:intergenic 45.0%
TTTGATCCTTGGGTTCTTCC+AGG - chr8_1:33560240-33560259 Msa1190520:three_prime_UTR 45.0%
!!! TTATGGTTTTGGTGCAGGCA+AGG - chr8_1:33560556-33560575 Msa1190520:three_prime_UTR 45.0%
ATTTCTTCAGTCCAAGGGAC+AGG - chr8_1:33560603-33560622 Msa1190520:three_prime_UTR 45.0%
TCTAGACCAAACAGAGTTGC+TGG - chr8_1:33560641-33560660 Msa1190520:three_prime_UTR 45.0%
GCTTCGCGAAAACACAATCT+TGG - chr8_1:33560815-33560834 Msa1190520:CDS 45.0%
! TCTCCTCTTGCTGTAGCATT+CGG + chr8_1:33561127-33561146 None:intergenic 45.0%
CTACAGCAAGAGGAGAAGTT+CGG - chr8_1:33561131-33561150 Msa1190520:CDS 45.0%
TACAGCAAGAGGAGAAGTTC+GGG - chr8_1:33561132-33561151 Msa1190520:CDS 45.0%
! GAAGTTCGGGTTTCACAACA+TGG - chr8_1:33561145-33561164 Msa1190520:CDS 45.0%
! GTGCTGGACTTTTCTCTGAT+TGG - chr8_1:33561168-33561187 Msa1190520:CDS 45.0%
ATTGAATCCTCACCGGAGTT+TGG - chr8_1:33561206-33561225 Msa1190520:intron 45.0%
! TGGATTAGGAAACCAGAGTC+AGG - chr8_1:33561226-33561245 Msa1190520:intron 45.0%
GGATTAGGAAACCAGAGTCA+GGG - chr8_1:33561227-33561246 Msa1190520:intron 45.0%
GATTAGGAAACCAGAGTCAG+GGG - chr8_1:33561228-33561247 Msa1190520:intron 45.0%
AGTCAGGGGATGCTGAATTA+CGG - chr8_1:33561242-33561261 Msa1190520:intron 45.0%
AAGTCCATGTTACCAAACGG+TGG + chr8_1:33561296-33561315 None:intergenic 45.0%
AAGAGGTTCAAAGCAGCATG+AGG - chr8_1:33561345-33561364 Msa1190520:CDS 45.0%
AAAGCAGCATGAGGACTAAC+CGG - chr8_1:33561354-33561373 Msa1190520:CDS 45.0%
TCCTTGTGGATGTTACGGAA+TGG - chr8_1:33561817-33561836 Msa1190520:intron 45.0%
TCCATTCCGTAACATCCACA+AGG + chr8_1:33561821-33561840 None:intergenic 45.0%
CTCAATGACCGACCAGTATA+CGG + chr8_1:33561870-33561889 None:intergenic 45.0%
GTATCAGGAACATTTCGGCT+CGG - chr8_1:33561968-33561987 Msa1190520:CDS 45.0%
TGTGAAAGAGGATCTCTCTC+TGG + chr8_1:33560093-33560112 None:intergenic 45.0%
TCACAGTTGAGTTTACCACC+TGG - chr8_1:33560108-33560127 Msa1190520:three_prime_UTR 45.0%
CAAGAAGCTCTTCATCAGTG+GGG + chr8_1:33560146-33560165 None:intergenic 45.0%
TTTGATCCTTGGGTTCTTCC+AGG - chr8_1:33560240-33560259 Msa1190520:three_prime_UTR 45.0%
!!! TTATGGTTTTGGTGCAGGCA+AGG - chr8_1:33560556-33560575 Msa1190520:three_prime_UTR 45.0%
ATTTCTTCAGTCCAAGGGAC+AGG - chr8_1:33560603-33560622 Msa1190520:three_prime_UTR 45.0%
TCTAGACCAAACAGAGTTGC+TGG - chr8_1:33560641-33560660 Msa1190520:three_prime_UTR 45.0%
GCTTCGCGAAAACACAATCT+TGG - chr8_1:33560815-33560834 Msa1190520:CDS 45.0%
! TCTCCTCTTGCTGTAGCATT+CGG + chr8_1:33561127-33561146 None:intergenic 45.0%
CTACAGCAAGAGGAGAAGTT+CGG - chr8_1:33561131-33561150 Msa1190520:CDS 45.0%
TACAGCAAGAGGAGAAGTTC+GGG - chr8_1:33561132-33561151 Msa1190520:CDS 45.0%
! GAAGTTCGGGTTTCACAACA+TGG - chr8_1:33561145-33561164 Msa1190520:CDS 45.0%
! GTGCTGGACTTTTCTCTGAT+TGG - chr8_1:33561168-33561187 Msa1190520:CDS 45.0%
ATTGAATCCTCACCGGAGTT+TGG - chr8_1:33561206-33561225 Msa1190520:intron 45.0%
! TGGATTAGGAAACCAGAGTC+AGG - chr8_1:33561226-33561245 Msa1190520:intron 45.0%
GGATTAGGAAACCAGAGTCA+GGG - chr8_1:33561227-33561246 Msa1190520:intron 45.0%
GATTAGGAAACCAGAGTCAG+GGG - chr8_1:33561228-33561247 Msa1190520:intron 45.0%
AGTCAGGGGATGCTGAATTA+CGG - chr8_1:33561242-33561261 Msa1190520:intron 45.0%
AAGTCCATGTTACCAAACGG+TGG + chr8_1:33561296-33561315 None:intergenic 45.0%
AAGAGGTTCAAAGCAGCATG+AGG - chr8_1:33561345-33561364 Msa1190520:CDS 45.0%
AAAGCAGCATGAGGACTAAC+CGG - chr8_1:33561354-33561373 Msa1190520:CDS 45.0%
TCCTTGTGGATGTTACGGAA+TGG - chr8_1:33561817-33561836 Msa1190520:intron 45.0%
TCCATTCCGTAACATCCACA+AGG + chr8_1:33561821-33561840 None:intergenic 45.0%
CTCAATGACCGACCAGTATA+CGG + chr8_1:33561870-33561889 None:intergenic 45.0%
GTATCAGGAACATTTCGGCT+CGG - chr8_1:33561968-33561987 Msa1190520:CDS 45.0%
!!! TAATAATAATGTATTTTTAT+CGG - chr8_1:33561406-33561425 Msa1190520:CDS 5.0%
!!! TAATAATAATGTATTTTTAT+CGG - chr8_1:33561406-33561425 Msa1190520:CDS 5.0%
! GGGAAGAATCTGAAACCAGG+TGG + chr8_1:33560126-33560145 None:intergenic 50.0%
! GTGGGGAAGAATCTGAAACC+AGG + chr8_1:33560129-33560148 None:intergenic 50.0%
CCAGAACCAGCAACTCTGTT+TGG + chr8_1:33560650-33560669 None:intergenic 50.0%
!! CCAAACAGAGTTGCTGGTTC+TGG - chr8_1:33560647-33560666 Msa1190520:three_prime_UTR 50.0%
!! GAGTTGCTGGTTCTGGTTAC+TGG - chr8_1:33560654-33560673 Msa1190520:three_prime_UTR 50.0%
TCTGGTTACTGGAAAGCCAC+AGG - chr8_1:33560665-33560684 Msa1190520:exon 50.0%
GTCCAACATTTCGTCCACCT+GGG + chr8_1:33561051-33561070 None:intergenic 50.0%
AGTCCAACATTTCGTCCACC+TGG + chr8_1:33561052-33561071 None:intergenic 50.0%
CGAAATGTTGGACTCGTTCC+TGG - chr8_1:33561058-33561077 Msa1190520:CDS 50.0%
ATCAGAGCTTTGCATTGCCG+CGG - chr8_1:33561090-33561109 Msa1190520:CDS 50.0%
ATTCGGAGTGATGTTACCCG+CGG + chr8_1:33561110-33561129 None:intergenic 50.0%
ACTCCGAATGCTACAGCAAG+AGG - chr8_1:33561121-33561140 Msa1190520:CDS 50.0%
TCCTCACCGGAGTTTGGATT+AGG - chr8_1:33561212-33561231 Msa1190520:intron 50.0%
TCCTAATCCAAACTCCGGTG+AGG + chr8_1:33561216-33561235 None:intergenic 50.0%
AATTCAGCATCCCCTGACTC+TGG + chr8_1:33561241-33561260 None:intergenic 50.0%
CATGTTACCAAACGGTGGCA+CGG + chr8_1:33561291-33561310 None:intergenic 50.0%
TGGTAACATGGACTTGTCGG+TGG - chr8_1:33561301-33561320 Msa1190520:intron 50.0%
TTTGAACCTCTTCGTCGGTG+GGG + chr8_1:33561337-33561356 None:intergenic 50.0%
CTTTGAACCTCTTCGTCGGT+GGG + chr8_1:33561338-33561357 None:intergenic 50.0%
! GCTGCTTTGAACCTCTTCGT+CGG + chr8_1:33561342-33561361 None:intergenic 50.0%
AAGCAGCATGAGGACTAACC+GGG - chr8_1:33561355-33561374 Msa1190520:CDS 50.0%
CCGAATACCCAAACCCGAAT+GGG + chr8_1:33561442-33561461 None:intergenic 50.0%
! CCCATTCGGGTTTGGGTATT+CGG - chr8_1:33561439-33561458 Msa1190520:CDS 50.0%
! CCATTCGGGTTTGGGTATTC+GGG - chr8_1:33561440-33561459 Msa1190520:CDS 50.0%
! GGGAAGAATCTGAAACCAGG+TGG + chr8_1:33560126-33560145 None:intergenic 50.0%
! GTGGGGAAGAATCTGAAACC+AGG + chr8_1:33560129-33560148 None:intergenic 50.0%
CCAGAACCAGCAACTCTGTT+TGG + chr8_1:33560650-33560669 None:intergenic 50.0%
!! CCAAACAGAGTTGCTGGTTC+TGG - chr8_1:33560647-33560666 Msa1190520:three_prime_UTR 50.0%
!! GAGTTGCTGGTTCTGGTTAC+TGG - chr8_1:33560654-33560673 Msa1190520:three_prime_UTR 50.0%
TCTGGTTACTGGAAAGCCAC+AGG - chr8_1:33560665-33560684 Msa1190520:exon 50.0%
GTCCAACATTTCGTCCACCT+GGG + chr8_1:33561051-33561070 None:intergenic 50.0%
AGTCCAACATTTCGTCCACC+TGG + chr8_1:33561052-33561071 None:intergenic 50.0%
CGAAATGTTGGACTCGTTCC+TGG - chr8_1:33561058-33561077 Msa1190520:CDS 50.0%
ATCAGAGCTTTGCATTGCCG+CGG - chr8_1:33561090-33561109 Msa1190520:CDS 50.0%
ATTCGGAGTGATGTTACCCG+CGG + chr8_1:33561110-33561129 None:intergenic 50.0%
ACTCCGAATGCTACAGCAAG+AGG - chr8_1:33561121-33561140 Msa1190520:CDS 50.0%
TCCTCACCGGAGTTTGGATT+AGG - chr8_1:33561212-33561231 Msa1190520:intron 50.0%
TCCTAATCCAAACTCCGGTG+AGG + chr8_1:33561216-33561235 None:intergenic 50.0%
AATTCAGCATCCCCTGACTC+TGG + chr8_1:33561241-33561260 None:intergenic 50.0%
CATGTTACCAAACGGTGGCA+CGG + chr8_1:33561291-33561310 None:intergenic 50.0%
TGGTAACATGGACTTGTCGG+TGG - chr8_1:33561301-33561320 Msa1190520:intron 50.0%
TTTGAACCTCTTCGTCGGTG+GGG + chr8_1:33561337-33561356 None:intergenic 50.0%
CTTTGAACCTCTTCGTCGGT+GGG + chr8_1:33561338-33561357 None:intergenic 50.0%
! GCTGCTTTGAACCTCTTCGT+CGG + chr8_1:33561342-33561361 None:intergenic 50.0%
AAGCAGCATGAGGACTAACC+GGG - chr8_1:33561355-33561374 Msa1190520:CDS 50.0%
CCGAATACCCAAACCCGAAT+GGG + chr8_1:33561442-33561461 None:intergenic 50.0%
! CCCATTCGGGTTTGGGTATT+CGG - chr8_1:33561439-33561458 Msa1190520:CDS 50.0%
! CCATTCGGGTTTGGGTATTC+GGG - chr8_1:33561440-33561459 Msa1190520:CDS 50.0%
! GGTGCAGGCAAGGCGAATTT+TGG - chr8_1:33560566-33560585 Msa1190520:three_prime_UTR 55.0%
GTCCCAGGTGGACGAAATGT+TGG - chr8_1:33561046-33561065 Msa1190520:CDS 55.0%
TCAGAGCTTTGCATTGCCGC+GGG - chr8_1:33561091-33561110 Msa1190520:CDS 55.0%
GGGTTTCACAACATGGGTGC+TGG - chr8_1:33561152-33561171 Msa1190520:CDS 55.0%
TTACCAAACGGTGGCACGGA+AGG + chr8_1:33561287-33561306 None:intergenic 55.0%
! CGTGCCACCGTTTGGTAACA+TGG - chr8_1:33561289-33561308 Msa1190520:intron 55.0%
! GCTTTGAACCTCTTCGTCGG+TGG + chr8_1:33561339-33561358 None:intergenic 55.0%
AACTAGAAGGGTCGGTGACC+CGG + chr8_1:33561376-33561395 None:intergenic 55.0%
! TTGGGTGACCCATTCGGGTT+TGG - chr8_1:33561431-33561450 Msa1190520:CDS 55.0%
! TGGGTGACCCATTCGGGTTT+GGG - chr8_1:33561432-33561451 Msa1190520:CDS 55.0%
CCCGAATACCCAAACCCGAA+TGG + chr8_1:33561443-33561462 None:intergenic 55.0%
! GGTGCAGGCAAGGCGAATTT+TGG - chr8_1:33560566-33560585 Msa1190520:three_prime_UTR 55.0%
GTCCCAGGTGGACGAAATGT+TGG - chr8_1:33561046-33561065 Msa1190520:CDS 55.0%
TCAGAGCTTTGCATTGCCGC+GGG - chr8_1:33561091-33561110 Msa1190520:CDS 55.0%
GGGTTTCACAACATGGGTGC+TGG - chr8_1:33561152-33561171 Msa1190520:CDS 55.0%
TTACCAAACGGTGGCACGGA+AGG + chr8_1:33561287-33561306 None:intergenic 55.0%
! CGTGCCACCGTTTGGTAACA+TGG - chr8_1:33561289-33561308 Msa1190520:intron 55.0%
! GCTTTGAACCTCTTCGTCGG+TGG + chr8_1:33561339-33561358 None:intergenic 55.0%
AACTAGAAGGGTCGGTGACC+CGG + chr8_1:33561376-33561395 None:intergenic 55.0%
! TTGGGTGACCCATTCGGGTT+TGG - chr8_1:33561431-33561450 Msa1190520:CDS 55.0%
! TGGGTGACCCATTCGGGTTT+GGG - chr8_1:33561432-33561451 Msa1190520:CDS 55.0%
CCCGAATACCCAAACCCGAA+TGG + chr8_1:33561443-33561462 None:intergenic 55.0%
TTCGCCTTCATCGTCGTCCC+AGG - chr8_1:33561031-33561050 Msa1190520:CDS 60.0%
TCCACCTGGGACGACGATGA+AGG + chr8_1:33561038-33561057 None:intergenic 60.0%
GTTCCTTCCGTGCCACCGTT+TGG - chr8_1:33561281-33561300 Msa1190520:intron 60.0%
CTCTTCGTCGGTGGGGTTCT+TGG + chr8_1:33561330-33561349 None:intergenic 60.0%
CAAGAACCCCACCGACGAAG+AGG - chr8_1:33561328-33561347 Msa1190520:CDS 60.0%
TCGGGCTTGGGTGACCCATT+CGG - chr8_1:33561425-33561444 Msa1190520:CDS 60.0%
TTCGCCTTCATCGTCGTCCC+AGG - chr8_1:33561031-33561050 Msa1190520:CDS 60.0%
TCCACCTGGGACGACGATGA+AGG + chr8_1:33561038-33561057 None:intergenic 60.0%
GTTCCTTCCGTGCCACCGTT+TGG - chr8_1:33561281-33561300 Msa1190520:intron 60.0%
CTCTTCGTCGGTGGGGTTCT+TGG + chr8_1:33561330-33561349 None:intergenic 60.0%
CAAGAACCCCACCGACGAAG+AGG - chr8_1:33561328-33561347 Msa1190520:CDS 60.0%
TCGGGCTTGGGTGACCCATT+CGG - chr8_1:33561425-33561444 Msa1190520:CDS 60.0%
GCCTTCATCGTCGTCCCAGG+TGG - chr8_1:33561034-33561053 Msa1190520:CDS 65.0%
CGGGCTTGGGTGACCCATTC+GGG - chr8_1:33561426-33561445 Msa1190520:CDS 65.0%
GCCTTCATCGTCGTCCCAGG+TGG - chr8_1:33561034-33561053 Msa1190520:CDS 65.0%
CGGGCTTGGGTGACCCATTC+GGG - chr8_1:33561426-33561445 Msa1190520:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 33559990 33562163 33559990 ID=Msa1190520;Name=Msa1190520
chr8_1 mRNA 33559990 33562163 33559990 ID=Msa1190520-mRNA-1;Parent=Msa1190520;Name=Msa1190520-mRNA-1;_AED=0.04;_eAED=0.04;_QI=91|1|1|1|1|1|3|694|329
chr8_1 exon 33559990 33561217 33559990 ID=Msa1190520-mRNA-1:exon:11271;Parent=Msa1190520-mRNA-1
chr8_1 exon 33561306 33561580 33561306 ID=Msa1190520-mRNA-1:exon:11270;Parent=Msa1190520-mRNA-1
chr8_1 exon 33561892 33562163 33561892 ID=Msa1190520-mRNA-1:exon:11269;Parent=Msa1190520-mRNA-1
chr8_1 five_prime_UTR 33562073 33562163 33562073 ID=Msa1190520-mRNA-1:five_prime_utr;Parent=Msa1190520-mRNA-1
chr8_1 CDS 33561892 33562072 33561892 ID=Msa1190520-mRNA-1:cds;Parent=Msa1190520-mRNA-1
chr8_1 CDS 33561306 33561580 33561306 ID=Msa1190520-mRNA-1:cds;Parent=Msa1190520-mRNA-1
chr8_1 CDS 33560684 33561217 33560684 ID=Msa1190520-mRNA-1:cds;Parent=Msa1190520-mRNA-1
chr8_1 three_prime_UTR 33559990 33560683 33559990 ID=Msa1190520-mRNA-1:three_prime_utr;Parent=Msa1190520-mRNA-1
Gene Sequence

>Msa1190520

ATGGGAGTTCCAGAGAGAGATCCTCTTTCACAGTTGAGTTTACCACCTGGTTTCAGATTCTTCCCCACTGATGAAGAGCTTCTTGTTCAGTATCTATGTCGTAAAGTTGCAGGACATCATTTTTCTTTGCCAATTATTGCTGAAATTGACTTGTACAAGTTTGATCCTTGGGTTCTTCCAGGCAAGGCGAATTTTGGTGAGAAAGAATGGTATTTCTTCAGTCCAAGGGACAGGAAATATCCAAATGGTTCTAGACCAAACAGAGTTGCTGGTTCTGGTTACTGGAAAGCCACAGGAACAGACAAAATTATCACAACTGAAGGTAGAAAAGTTGGCATAAAAAAAGCACTTGTTTTCTATATTGGCAAAGCACCAAAAGGAACAAAAACTAATTGGATTATGCATGAGTATCGTCTTCTTGATGCTTCGCGAAAACACAATCTTGGTAGCACAAAACTTGATGATTGGGTTTTGTGTCGAATATACAAGAAAAACTCAAGCTCGCAAAAGGAAATTCCAACATTTTCAACCAAAGAATGCAGCAATGGTTCTTCGCCTTCATCGTCGTCCCAGGTGGACGAAATGTTGGACTCGTTCCTGGAAATTGATGATCAGAGCTTTGCATTGCCGCGGGTAACATCACTCCGAATGCTACAGCAAGAGGAGAAGTTCGGGTTTCACAACATGGGTGCTGGACTTTTCTCTGATTGGGTTAACCCGACAGATATTGAATCCTCACCGGAGTTTGGATTAGGAAACCAGAGTCAGGGGATGCTGAATTACGGTTGTAATGACTATTGTGTTCCTTCCGTGCCACCGTTTGGTAACATGGACTTGTCGGTGGAGTCCAAGAACCCCACCGACGAAGAGGTTCAAAGCAGCATGAGGACTAACCGGGTCACCGACCCTTCTAGTTTATATCAACATAATAATAATGTATTTTTATCGGGCTTGGGTGACCCATTCGGGTTTGGGTATTCGGGTCATTAA
Protein sequence

>Msa1190520

MGVPERDPLSQLSLPPGFRFFPTDEELLVQYLCRKVAGHHFSLPIIAEIDLYKFDPWVLPGKANFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYIGKAPKGTKTNWIMHEYRLLDASRKHNLGSTKLDDWVLCRIYKKNSSSQKEIPTFSTKECSNGSSPSSSSQVDEMLDSFLEIDDQSFALPRVTSLRMLQQEEKFGFHNMGAGLFSDWVNPTDIESSPEFGLGNQSQGMLNYGCNDYCVPSVPPFGNMDLSVESKNPTDEEVQSSMRTNRVTDPSSLYQHNNNVFLSGLGDPFGFGYSGH*