AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1244960

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1244960 MtrunA17_Chr8g0359921 96.657 329 11 0 1 329 1 329 0.0 667
Msa1244960 MtrunA17_Chr2g0318081 63.584 346 101 8 1 326 3 343 3.46e-145 413
Msa1244960 MtrunA17_Chr3g0124761 70.552 163 46 2 10 171 3 164 7.30e-79 242
Msa1244960 MtrunA17_Chr2g0318101 64.740 173 50 3 11 172 12 184 2.66e-74 233
Msa1244960 MtrunA17_Chr7g0252971 46.233 292 112 10 1 266 1 273 2.66e-74 232
Msa1244960 MtrunA17_Chr4g0047841 63.934 183 43 4 14 173 15 197 5.79e-74 231
Msa1244960 MtrunA17_Chr8g0384721 68.944 161 47 2 12 170 5 164 1.10e-73 229
Msa1244960 MtrunA17_Chr3g0130731 67.683 164 45 3 11 170 4 163 2.64e-73 228
Msa1244960 MtrunA17_Chr5g0417791 62.500 160 58 1 12 169 1 160 1.52e-71 223
Msa1244960 MtrunA17_Chr4g0042561 63.399 153 54 1 14 164 9 161 5.58e-70 219
Msa1244960 MtrunA17_Chr7g0263931 57.436 195 73 4 5 195 2 190 2.77e-69 219
Msa1244960 MtrunA17_Chr2g0326361 59.770 174 61 3 10 174 10 183 3.42e-67 213
Msa1244960 MtrunA17_Chr2g0309891 53.179 173 74 3 9 179 1 168 2.72e-60 196
Msa1244960 MtrunA17_Chr6g0453451 54.375 160 73 0 11 170 17 176 3.21e-59 193
Msa1244960 MtrunA17_Chr6g0484441 56.329 158 65 2 13 170 4 157 5.68e-59 192
Msa1244960 MtrunA17_Chr4g0060931 55.625 160 71 0 11 170 14 173 6.56e-59 193
Msa1244960 MtrunA17_Chr5g0433781 56.875 160 65 2 9 166 1 158 1.18e-58 199
Msa1244960 MtrunA17_Chr3g0091921 53.631 179 83 0 11 189 13 191 1.66e-58 190
Msa1244960 MtrunA17_Chr7g0253011 55.828 163 68 1 12 170 15 177 2.21e-57 190
Msa1244960 MtrunA17_Chr3g0109821 57.500 160 65 2 9 166 1 159 4.86e-56 192
Msa1244960 MtrunA17_Chr6g0481091 52.830 159 71 2 9 165 1 157 6.01e-56 182
Msa1244960 MtrunA17_Chr3g0139331 54.375 160 67 2 13 170 10 165 3.39e-55 183
Msa1244960 MtrunA17_Chr4g0076731 58.000 150 58 2 16 164 56 201 4.34e-55 185
Msa1244960 MtrunA17_Chr2g0316971 55.769 156 67 1 14 167 23 178 2.91e-54 182
Msa1244960 MtrunA17_Chr5g0417001 56.024 166 64 6 16 172 16 181 3.78e-54 182
Msa1244960 MtrunA17_Chr6g0461661 52.695 167 77 1 12 176 16 182 2.45e-53 179
Msa1244960 MtrunA17_Chr1g0147421 52.174 161 70 3 13 170 26 182 5.41e-53 178
Msa1244960 MtrunA17_Chr4g0017921 53.896 154 63 2 14 164 8 156 7.41e-53 177
Msa1244960 MtrunA17_Chr2g0312321 40.807 223 121 5 9 228 6 220 1.25e-52 175
Msa1244960 MtrunA17_Chr2g0309331 50.296 169 73 4 11 172 7 171 1.67e-52 176
Msa1244960 MtrunA17_Chr6g0453131 53.086 162 68 3 14 167 15 176 2.32e-52 177
Msa1244960 MtrunA17_Chr8g0361731 51.497 167 71 5 16 172 16 182 3.22e-52 177
Msa1244960 MtrunA17_Chr1g0200561 39.744 234 117 5 3 231 6 220 1.17e-51 174
Msa1244960 MtrunA17_Chr7g0217721 46.821 173 79 1 11 170 16 188 3.50e-51 173
Msa1244960 MtrunA17_Chr5g0400461 52.121 165 65 3 13 168 5 164 7.52e-51 171
Msa1244960 MtrunA17_Chr8g0346001 48.780 164 74 3 11 164 12 175 3.30e-50 172
Msa1244960 MtrunA17_Chr7g0214071 54.321 162 65 4 11 170 12 166 3.36e-50 167
Msa1244960 MtrunA17_Chr2g0311661 45.933 209 91 7 16 207 23 226 5.96e-50 168
Msa1244960 MtrunA17_Chr8g0372121 48.428 159 75 2 14 169 6 160 2.50e-49 167
Msa1244960 MtrunA17_Chr4g0018391 47.468 158 76 2 14 168 7 160 2.85e-49 167
Msa1244960 MtrunA17_Chr7g0217711 55.396 139 61 1 11 148 16 154 3.71e-49 162
Msa1244960 MtrunA17_Chr4g0056541 45.029 171 87 2 14 181 7 173 7.15e-49 167
Msa1244960 MtrunA17_Chr5g0405211 46.875 160 78 2 14 170 8 163 1.27e-48 166
Msa1244960 MtrunA17_Chr2g0311651 51.744 172 67 6 16 172 24 194 9.90e-48 163
Msa1244960 MtrunA17_Chr5g0442771 45.596 193 95 2 16 198 20 212 1.17e-47 162
Msa1244960 MtrunA17_Chr4g0054791 51.829 164 70 4 13 170 5 165 1.26e-46 160
Msa1244960 MtrunA17_Chr5g0398971 48.387 155 73 3 14 164 7 158 1.34e-46 161
Msa1244960 MtrunA17_Chr1g0183741 43.956 182 92 3 13 192 9 182 2.71e-45 155
Msa1244960 MtrunA17_Chr4g0038751 49.375 160 70 3 11 167 13 164 1.04e-44 154
Msa1244960 MtrunA17_Chr1g0197351 50.000 160 74 2 13 166 41 200 1.66e-44 158
Msa1244960 MtrunA17_Chr7g0261411 48.684 152 70 2 13 162 9 154 2.45e-44 153
Msa1244960 MtrunA17_Chr5g0428991 39.676 247 129 6 9 244 20 257 2.50e-44 160
Msa1244960 MtrunA17_Chr3g0128151 50.920 163 74 3 9 168 17 176 7.29e-44 158
Msa1244960 MtrunA17_Chr3g0128111 40.000 210 103 5 17 223 45 234 1.40e-43 150
Msa1244960 MtrunA17_Chr1g0201021 47.097 155 78 3 12 164 17 169 6.70e-43 155
Msa1244960 MtrunA17_Chr3g0092671 47.273 165 75 4 12 170 3 161 8.51e-43 155
Msa1244960 MtrunA17_Chr3g0144271 56.589 129 53 2 14 139 23 151 1.28e-42 152
Msa1244960 MtrunA17_Chr3g0131911 48.466 163 74 3 14 168 14 174 2.49e-42 146
Msa1244960 MtrunA17_Chr3g0130101 45.695 151 78 2 16 164 9 157 5.24e-42 149
Msa1244960 MtrunA17_Chr8g0364791 46.405 153 78 2 14 164 6 156 7.11e-42 150
Msa1244960 MtrunA17_Chr8g0385991 46.405 153 75 3 14 161 14 164 3.75e-41 143
Msa1244960 MtrunA17_Chr8g0384201 44.444 153 81 2 14 164 6 156 1.20e-39 145
Msa1244960 MtrunA17_Chr1g0197361 46.203 158 79 3 16 170 10 164 1.29e-39 147
Msa1244960 MtrunA17_Chr2g0321631 46.795 156 75 5 15 162 5 160 1.72e-36 131
Msa1244960 MtrunA17_Chr4g0050701 41.975 162 80 3 14 169 11 164 2.40e-36 129
Msa1244960 MtrunA17_Chr4g0026141 43.671 158 78 5 14 162 5 160 4.36e-36 131
Msa1244960 MtrunA17_Chr2g0321741 41.615 161 73 5 34 193 12 152 6.35e-35 130
Msa1244960 MtrunA17_Chr3g0113001 46.763 139 71 3 63 198 14 152 7.14e-35 129
Msa1244960 MtrunA17_Chr8g0345671 47.097 155 65 7 14 161 11 155 2.35e-34 129
Msa1244960 MtrunA17_Chr7g0266701 38.650 163 90 6 13 165 3 165 3.48e-34 125
Msa1244960 MtrunA17_Chr8g0345691 36.364 220 118 8 14 224 12 218 1.54e-29 117
Msa1244960 MtrunA17_Chr8g0345711 38.509 161 84 6 13 159 11 170 7.63e-28 106
Msa1244960 MtrunA17_Chr3g0113031 42.857 126 68 3 77 198 3 128 5.47e-26 104
Msa1244960 MtrunA17_Chr8g0345731 38.000 150 83 5 14 153 24 173 2.45e-25 100
Msa1244960 MtrunA17_Chr8g0345721 37.079 178 70 7 1 137 15 191 2.50e-25 101
Msa1244960 MtrunA17_Chr8g0384351 34.951 206 104 7 10 211 6 185 3.28e-25 100
Msa1244960 MtrunA17_Chr8g0345701 39.189 148 68 6 10 138 3 147 1.34e-22 92.8
Msa1244960 MtrunA17_Chr3g0130321 32.075 212 124 7 12 211 5 208 3.40e-22 92.8
Msa1244960 MtrunA17_Chr7g0243371 58.667 75 29 2 67 139 17 91 3.74e-22 90.1
Msa1244960 MtrunA17_Chr8g0345741 37.063 143 73 6 25 162 2 132 1.52e-21 89.4
Msa1244960 MtrunA17_Chr7g0251661 31.250 144 90 5 10 147 6 146 6.78e-19 82.4
Msa1244960 MtrunA17_Chr7g0251651 33.077 130 79 5 12 137 16 141 6.96e-15 72.0
Msa1244960 MtrunA17_Chr8g0389661 32.895 152 76 5 12 139 45 194 4.30e-13 69.7
Msa1244960 MtrunA17_Chr3g0113011 50.000 54 27 0 11 64 16 69 4.51e-12 60.8
Msa1244960 MtrunA17_Chr1g0198751 33.333 141 78 6 14 139 58 197 1.57e-11 65.1
Msa1244960 MtrunA17_Chr4g0040541 31.469 143 80 4 14 139 48 189 2.33e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1244960 AT4G27410.2 68.030 269 65 6 1 265 1 252 8.80e-119 344
Msa1244960 AT4G27410.3 64.336 286 64 7 1 265 1 269 3.93e-115 336
Msa1244960 AT1G52890.1 64.621 277 81 7 1 263 1 274 1.32e-114 335
Msa1244960 AT3G15500.1 65.152 264 75 4 1 251 1 260 2.56e-112 329
Msa1244960 AT1G01720.1 70.122 164 46 2 12 173 5 167 1.38e-78 242
Msa1244960 AT5G08790.1 61.749 183 66 2 10 189 3 184 5.98e-75 232
Msa1244960 AT3G04070.2 65.318 173 48 4 6 168 4 174 5.72e-73 229
Msa1244960 AT5G63790.1 61.081 185 62 3 10 188 46 226 1.26e-72 227
Msa1244960 AT5G63790.2 61.081 185 62 3 10 188 56 236 1.29e-72 228
Msa1244960 AT1G61110.1 64.972 177 51 3 14 179 16 192 2.63e-72 227
Msa1244960 AT1G77450.1 52.018 223 100 3 10 231 6 222 6.35e-72 223
Msa1244960 AT3G04070.1 61.905 189 44 6 6 168 4 190 1.04e-70 224
Msa1244960 AT1G69490.1 65.644 163 52 2 10 169 5 166 1.57e-70 220
Msa1244960 AT3G15510.1 65.455 165 42 4 18 169 21 183 7.11e-69 219
Msa1244960 AT1G52880.1 65.217 161 46 3 18 168 21 181 1.71e-62 201
Msa1244960 AT3G18400.1 48.020 202 96 3 13 214 4 196 5.70e-61 197
Msa1244960 AT5G07680.1 55.294 170 76 0 1 170 4 173 2.03e-60 196
Msa1244960 AT5G61430.1 57.229 166 70 1 11 176 13 177 3.54e-60 196
Msa1244960 AT5G07680.2 57.233 159 68 0 12 170 1 159 4.13e-59 192
Msa1244960 AT5G39610.1 56.250 160 70 0 11 170 17 176 9.60e-58 188
Msa1244960 AT2G24430.2 54.938 162 68 2 13 172 15 173 3.88e-57 187
Msa1244960 AT2G24430.1 54.938 162 68 2 13 172 15 173 3.88e-57 187
Msa1244960 AT5G53950.1 50.802 187 84 2 14 192 17 203 7.19e-57 189
Msa1244960 AT3G04060.1 50.802 187 85 2 12 197 18 198 7.76e-57 187
Msa1244960 AT2G02450.1 53.409 176 75 4 16 188 53 224 8.75e-57 189
Msa1244960 AT2G02450.2 53.409 176 75 4 16 188 53 224 1.08e-56 189
Msa1244960 AT5G18270.2 50.267 187 91 2 12 197 19 204 1.38e-56 187
Msa1244960 AT5G18270.1 49.733 187 92 2 12 197 19 204 3.97e-56 186
Msa1244960 AT1G65910.1 54.268 164 71 2 9 170 1 162 5.81e-56 192
Msa1244960 AT3G03200.1 54.430 158 69 2 9 164 1 157 5.26e-55 186
Msa1244960 AT3G29035.1 54.658 161 73 0 11 171 21 181 1.17e-54 181
Msa1244960 AT3G15170.1 47.368 190 96 2 14 199 20 209 1.27e-54 181
Msa1244960 AT3G17730.1 49.153 177 84 3 9 181 1 175 1.38e-54 179
Msa1244960 AT5G17260.1 54.430 158 69 2 9 164 1 157 2.11e-54 185
Msa1244960 AT5G39820.1 50.829 181 66 4 16 173 22 202 8.03e-54 179
Msa1244960 AT2G43000.1 48.705 193 88 3 16 199 20 210 1.64e-53 177
Msa1244960 AT2G33480.1 56.688 157 63 2 12 168 13 164 1.68e-53 177
Msa1244960 AT1G26870.1 53.049 164 68 3 14 168 16 179 9.93e-53 179
Msa1244960 AT2G33480.2 55.975 159 59 3 12 168 13 162 1.24e-52 174
Msa1244960 AT5G13180.1 56.522 161 62 5 12 170 12 166 4.99e-52 172
Msa1244960 AT4G17980.1 50.279 179 85 2 14 188 6 184 1.04e-51 172
Msa1244960 AT3G12977.1 42.051 195 103 4 9 203 13 197 1.13e-51 172
Msa1244960 AT4G17980.2 50.279 179 85 2 14 188 6 184 1.50e-51 172
Msa1244960 AT1G54330.1 53.459 159 67 2 9 165 1 154 2.20e-51 172
Msa1244960 AT1G71930.2 45.562 169 85 2 7 172 2 166 2.40e-51 173
Msa1244960 AT1G71930.1 45.562 169 85 2 7 172 2 166 2.40e-51 173
Msa1244960 AT4G10350.1 51.948 154 69 2 14 164 9 160 2.87e-51 173
Msa1244960 AT1G33280.1 51.282 156 68 2 14 166 8 158 9.43e-51 171
Msa1244960 AT1G56010.2 48.447 161 79 3 9 166 14 173 1.88e-50 171
Msa1244960 AT2G46770.1 43.810 210 100 7 11 202 13 222 2.45e-50 171
Msa1244960 AT2G18060.3 42.051 195 105 3 7 197 2 192 3.44e-50 171
Msa1244960 AT2G18060.1 42.051 195 105 3 7 197 2 192 3.44e-50 171
Msa1244960 AT1G79580.3 51.899 158 67 3 11 164 14 166 5.81e-50 171
Msa1244960 AT1G79580.5 51.899 158 67 3 11 164 14 166 5.81e-50 171
Msa1244960 AT1G79580.4 51.899 158 67 3 11 164 14 166 5.81e-50 171
Msa1244960 AT1G79580.2 51.899 158 67 3 11 164 14 166 5.81e-50 171
Msa1244960 AT1G79580.1 51.899 158 67 3 11 164 14 166 5.81e-50 171
Msa1244960 AT1G76420.1 50.286 175 72 4 1 164 1 171 6.73e-50 169
Msa1244960 AT5G66300.1 47.879 165 76 3 13 174 11 168 2.07e-49 167
Msa1244960 AT5G46590.1 55.128 156 64 4 14 165 6 159 5.90e-49 166
Msa1244960 AT3G61910.1 40.654 214 99 5 11 206 8 211 6.28e-49 167
Msa1244960 AT5G62380.2 42.381 210 106 5 14 219 7 205 3.37e-48 165
Msa1244960 AT5G62380.1 42.381 210 106 5 14 219 7 205 3.37e-48 165
Msa1244960 AT3G10480.1 50.625 160 76 2 9 166 22 180 4.67e-48 167
Msa1244960 AT1G12260.2 45.509 167 84 2 14 177 7 169 5.51e-48 164
Msa1244960 AT1G32770.1 46.061 165 78 2 11 164 13 177 7.83e-48 164
Msa1244960 AT1G12260.1 45.509 167 84 2 14 177 7 169 8.14e-48 166
Msa1244960 AT1G32510.1 49.133 173 76 4 14 176 6 176 9.48e-48 162
Msa1244960 AT3G10480.2 51.250 160 74 3 9 166 22 179 1.19e-47 166
Msa1244960 AT2G17040.1 42.152 223 103 7 16 223 8 219 1.31e-47 162
Msa1244960 AT4G36160.1 49.032 155 72 2 13 164 9 159 2.52e-47 164
Msa1244960 AT4G36160.3 49.032 155 72 2 13 164 9 159 2.52e-47 164
Msa1244960 AT4G36160.2 49.032 155 72 2 13 164 13 163 2.97e-47 164
Msa1244960 AT1G62700.1 48.701 154 72 2 14 164 7 156 3.59e-47 164
Msa1244960 AT1G62700.2 48.701 154 72 2 14 164 7 156 3.59e-47 164
Msa1244960 AT3G10490.1 49.359 156 76 2 13 166 26 180 1.09e-46 158
Msa1244960 AT5G46590.2 58.779 131 51 2 14 141 6 136 1.35e-46 159
Msa1244960 AT1G33060.2 48.795 166 81 2 5 168 15 178 2.45e-46 166
Msa1244960 AT1G33060.1 48.795 166 81 2 5 168 15 178 2.73e-46 166
Msa1244960 AT5G24590.2 45.833 192 95 4 9 195 8 195 5.92e-46 162
Msa1244960 AT3G12910.1 48.634 183 76 5 16 183 23 202 6.37e-46 158
Msa1244960 AT3G10490.2 49.359 156 76 2 13 166 26 180 9.56e-46 161
Msa1244960 AT4G35580.3 50.617 162 68 3 9 164 4 159 1.26e-45 162
Msa1244960 AT4G35580.2 50.617 162 68 3 9 164 4 159 1.32e-45 162
Msa1244960 AT4G35580.1 50.633 158 74 2 9 164 4 159 1.86e-45 162
Msa1244960 AT5G04410.1 49.080 163 79 2 10 170 5 165 4.65e-45 162
Msa1244960 AT3G10500.1 49.091 165 76 3 10 170 5 165 4.96e-45 161
Msa1244960 AT1G34180.3 41.951 205 99 5 16 216 18 206 9.95e-45 159
Msa1244960 AT1G34180.1 41.951 205 99 5 16 216 18 206 7.40e-44 158
Msa1244960 AT1G34190.1 45.283 159 79 3 16 170 18 172 6.04e-43 156
Msa1244960 AT3G10480.3 43.005 193 74 3 9 166 22 213 8.27e-43 155
Msa1244960 AT1G34180.4 40.183 219 95 6 16 216 18 218 8.43e-43 154
Msa1244960 AT3G49530.2 49.375 160 74 4 9 164 8 164 1.21e-42 152
Msa1244960 AT3G49530.1 49.375 160 74 4 9 164 8 164 3.45e-42 152
Msa1244960 AT2G27300.1 45.399 163 75 3 13 170 13 166 4.34e-42 149
Msa1244960 AT1G34180.2 40.183 219 95 6 16 216 18 218 4.96e-42 154
Msa1244960 AT5G64060.1 44.025 159 85 2 9 165 1 157 7.46e-42 149
Msa1244960 AT4G28530.1 45.665 173 70 5 14 168 10 176 4.57e-41 147
Msa1244960 AT1G32870.2 50.943 159 74 2 14 170 10 166 1.19e-40 149
Msa1244960 AT1G32870.1 50.943 159 74 2 14 170 10 166 1.35e-40 149
Msa1244960 AT1G32870.3 50.943 159 74 2 14 170 46 202 3.11e-40 149
Msa1244960 AT3G44290.2 43.871 155 76 3 16 169 16 160 1.72e-39 139
Msa1244960 AT5G22290.1 39.796 196 98 6 16 200 23 209 6.86e-39 140
Msa1244960 AT3G44290.1 43.871 155 76 3 16 169 16 160 1.20e-38 140
Msa1244960 AT5G61430.2 57.895 114 47 1 63 176 2 114 2.34e-38 137
Msa1244960 AT5G09330.5 42.138 159 88 2 9 165 1 157 4.68e-38 141
Msa1244960 AT5G09330.2 42.138 159 88 2 9 165 1 157 4.68e-38 141
Msa1244960 AT5G09330.4 42.138 159 88 2 9 165 1 157 4.68e-38 141
Msa1244960 AT5G09330.3 42.138 159 88 2 9 165 1 157 4.68e-38 141
Msa1244960 AT5G09330.1 42.138 159 88 2 9 165 1 157 4.68e-38 141
Msa1244960 AT5G64530.1 40.678 177 73 5 12 171 1 162 1.34e-34 125
Msa1244960 AT3G12977.2 43.972 141 69 4 63 203 14 144 1.42e-34 126
Msa1244960 AT1G56010.1 53.774 106 46 2 63 166 2 106 2.16e-34 127
Msa1244960 AT2G33480.3 55.882 102 43 1 67 168 8 107 2.32e-32 120
Msa1244960 AT4G10350.2 55.102 98 42 1 67 164 18 113 4.49e-32 121
Msa1244960 AT3G44350.2 39.024 164 89 5 14 169 5 165 8.16e-32 119
Msa1244960 AT5G22380.1 34.975 203 108 7 17 209 8 196 2.07e-31 118
Msa1244960 AT5G64530.2 46.970 132 56 3 12 141 1 120 4.49e-31 115
Msa1244960 AT3G44350.1 41.304 138 71 4 14 143 5 140 1.57e-28 108
Msa1244960 AT5G04395.1 40.411 146 71 2 10 139 24 169 4.67e-28 108
Msa1244960 AT2G43000.2 43.609 133 64 3 76 199 2 132 7.75e-26 102
Msa1244960 AT3G04420.2 41.732 127 70 2 15 137 4 130 1.21e-25 104
Msa1244960 AT4G28530.2 35.673 171 53 4 14 168 10 139 2.25e-25 103
Msa1244960 AT3G04420.1 41.732 127 70 2 15 137 4 130 3.17e-25 104
Msa1244960 AT4G01550.1 30.453 243 137 8 17 241 7 235 9.49e-25 104
Msa1244960 AT4G01520.1 40.909 132 71 4 15 139 5 136 2.25e-23 98.6
Msa1244960 AT4G27410.1 61.798 89 28 3 134 218 1 87 3.11e-23 94.7
Msa1244960 AT4G01540.3 41.538 130 69 4 17 139 7 136 7.22e-23 98.6
Msa1244960 AT4G01540.4 36.196 163 84 6 17 169 7 159 9.51e-23 98.2
Msa1244960 AT4G01540.1 41.538 130 69 4 17 139 7 136 1.06e-22 98.6
Msa1244960 AT4G01540.2 41.538 130 69 4 17 139 7 136 1.09e-22 98.2
Msa1244960 AT1G02230.1 40.769 130 67 5 15 137 4 130 1.07e-21 94.7
Msa1244960 AT1G02220.1 37.692 130 74 3 12 137 1 127 8.39e-21 92.4
Msa1244960 AT5G50820.1 33.514 185 101 7 12 185 15 188 2.27e-20 87.8
Msa1244960 AT1G02250.1 33.721 172 98 5 12 176 1 163 5.58e-20 89.7
Msa1244960 AT3G10490.4 48.750 80 40 1 87 166 2 80 1.13e-19 89.0
Msa1244960 AT3G10490.3 48.750 80 40 1 87 166 2 80 1.13e-19 89.0
Msa1244960 AT3G56530.1 34.194 155 95 4 11 162 49 199 4.98e-19 86.7
Msa1244960 AT1G01010.1 33.125 160 86 6 17 164 6 156 4.66e-17 82.0
Msa1244960 AT5G14000.1 31.288 163 101 4 12 171 13 167 5.20e-17 79.0
Msa1244960 AT2G18060.2 37.383 107 62 2 92 197 2 104 7.34e-17 79.7
Msa1244960 AT5G14000.2 34.286 140 86 3 12 147 13 150 9.74e-17 76.6
Msa1244960 AT3G55210.1 31.707 164 90 5 14 162 11 167 9.94e-17 79.3
Msa1244960 AT5G22290.2 37.288 118 55 5 93 200 2 110 4.89e-14 71.2
Msa1244960 AT4G29230.2 30.921 152 80 4 12 139 45 195 1.27e-12 68.9
Msa1244960 AT3G04430.1 35.606 132 71 5 20 138 6 136 2.30e-12 65.5
Msa1244960 AT5G56620.3 33.974 156 73 8 12 139 41 194 4.52e-12 67.0
Msa1244960 AT5G56620.2 33.974 156 73 8 12 139 41 194 5.16e-12 66.6
Msa1244960 AT1G28470.1 31.944 144 79 6 13 139 76 217 8.68e-12 65.5
Msa1244960 AT4G28500.1 36.806 144 71 7 14 139 59 200 1.08e-11 65.1
Msa1244960 AT5G56620.1 33.974 156 73 8 12 139 41 194 1.10e-11 65.5

Find 126 sgRNAs with CRISPR-Local

Find 324 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCATTCGGGTTTGGGTATT+CGG 0.143694 8_2:-34547282 Msa1244960:CDS
CTCTTCGTCGGTGGGGTTCT+TGG 0.156808 8_2:+34547394 None:intergenic
CAACTTTGCATGACATTATT+TGG 0.163219 8_2:-34546778 Msa1244960:three_prime_UTR
GAGTTGCTGGTTCTGGTTAC+TGG 0.209450 8_2:-34548067 Msa1244960:CDS
GGTGCAGGCAAGGCGAATTT+TGG 0.246467 8_2:-34548155 Msa1244960:intron
TTGGGTGACCCATTCGGGTT+TGG 0.254210 8_2:-34547290 Msa1244960:CDS
CAGCCGCAATATTTGTGTTT+AGG 0.271045 8_2:+34546711 None:intergenic
TGACATTATTTGGCTGTATC+AGG 0.273619 8_2:-34546768 Msa1244960:three_prime_UTR
AGAACCATTGCTGCATTCTT+TGG 0.294749 8_2:+34547712 None:intergenic
TTTGTTGTGACTTAAGTTTA+AGG 0.298237 8_2:+34547108 None:intergenic
GCAAATAATTGGTGATTCTT+TGG 0.308472 8_2:-34546994 Msa1244960:three_prime_UTR
TTTGATCCTTGGGTTCTTCC+AGG 0.310994 8_2:-34548482 Msa1244960:intron
TGGGTGACCCATTCGGGTTT+GGG 0.316078 8_2:-34547289 Msa1244960:CDS
CTTGTACAAGTTTGATCCTT+GGG 0.318790 8_2:-34548492 Msa1244960:CDS
ATTGAATCCTCACCGGAGTT+TGG 0.319990 8_2:-34547515 Msa1244960:CDS
CCAAACAGAGTTGCTGGTTC+TGG 0.323652 8_2:-34548074 Msa1244960:CDS
CTCAATGACCGACCAGTATA+CGG 0.325756 8_2:+34546854 None:intergenic
AGCTCTGATCATCAATTTCT+AGG 0.327340 8_2:+34547645 None:intergenic
CATGCCTATGTGCAAATAAT+TGG 0.333595 8_2:-34547005 Msa1244960:three_prime_UTR
AAGTCAATTTCAGCAATAAT+TGG 0.338246 8_2:+34548512 None:intergenic
CTGTTTGGTCTAGAACCATT+TGG 0.354289 8_2:+34548089 None:intergenic
TCGGGCTTGGGTGACCCATT+CGG 0.355450 8_2:-34547296 Msa1244960:CDS
GTATTCGGGTCATTAATTAT+AGG 0.357795 8_2:-34547267 Msa1244960:exon
TTATGTTGATATAAACTAGA+AGG 0.363334 8_2:+34547335 None:intergenic
CCATTCGGGTTTGGGTATTC+GGG 0.363965 8_2:-34547281 Msa1244960:CDS
TTGAAGATTCTCGTTTAATT+CGG 0.364788 8_2:+34547178 None:intergenic
CTTTGAACCTCTTCGTCGGT+GGG 0.389977 8_2:+34547386 None:intergenic
AGAAAGGCAAAACATAGTTT+TGG 0.391206 8_2:-34546927 Msa1244960:three_prime_UTR
TGGCTGTATCAGGAACATTT+CGG 0.395631 8_2:-34546758 Msa1244960:three_prime_UTR
TATCTATGTCGTAAAGTTGC+AGG 0.400628 8_2:-34548551 Msa1244960:CDS
GTGAAGGATTGGTTTGGTTA+TGG 0.402318 8_2:-34546962 Msa1244960:three_prime_UTR
CATTCTTTGGTTGAAAATGT+TGG 0.404347 8_2:+34547725 None:intergenic
TTTGGATATTTCCTGTCCCT+TGG 0.404470 8_2:+34548107 None:intergenic
TCTCCTCTTGCTGTAGCATT+CGG 0.405277 8_2:+34547597 None:intergenic
AAAGCAGCATGAGGACTAAC+CGG 0.407018 8_2:-34547367 Msa1244960:CDS
TCCTCACCGGAGTTTGGATT+AGG 0.414541 8_2:-34547509 Msa1244960:CDS
CGTGCCACCGTTTGGTAACA+TGG 0.418390 8_2:-34547432 Msa1244960:CDS
TTTGGTCCTTGTGGATGTTA+CGG 0.420562 8_2:-34546909 Msa1244960:three_prime_UTR
CCAGAACCAGCAACTCTGTT+TGG 0.423168 8_2:+34548074 None:intergenic
TCTAGACCAAACAGAGTTGC+TGG 0.423965 8_2:-34548080 Msa1244960:CDS
ATTGATGCAGCTTGATGATT+GGG 0.428244 8_2:-34547795 Msa1244960:intron
GGTCATTGAGAAAGTAACTA+TGG 0.432977 8_2:-34546841 Msa1244960:three_prime_UTR
TATTGATGCAGCTTGATGAT+TGG 0.443903 8_2:-34547796 Msa1244960:intron
TATACAATGAATCCGTATAC+TGG 0.444121 8_2:-34546866 Msa1244960:three_prime_UTR
TGGATTAGGAAACCAGAGTC+AGG 0.444473 8_2:-34547495 Msa1244960:CDS
ACTTGTACAAGTTTGATCCT+TGG 0.451700 8_2:-34548493 Msa1244960:CDS
CTACAGCAAGAGGAGAAGTT+CGG 0.456841 8_2:-34547590 Msa1244960:CDS
AGAATCTTCAATGATGATGA+TGG 0.457135 8_2:-34547166 Msa1244960:three_prime_UTR
GGTTATTCAATGTGAAGGAT+TGG 0.457724 8_2:-34546973 Msa1244960:three_prime_UTR
TACAGCAAGAGGAGAAGTTC+GGG 0.459516 8_2:-34547589 Msa1244960:CDS
TTCGCCTTCATCATCGTCCC+AGG 0.460396 8_2:-34547690 Msa1244960:CDS
TTCAATGTGAAGGATTGGTT+TGG 0.462734 8_2:-34546968 Msa1244960:three_prime_UTR
CTACGATTGACACATATGAT+AGG 0.465988 8_2:+34547071 None:intergenic
GTTCCTTCCGTGCCACCGTT+TGG 0.466910 8_2:-34547440 Msa1244960:CDS
GTGACTTAAGTTTAAGGCTA+GGG 0.470713 8_2:+34547114 None:intergenic
GGGTTTCACAACATGGGTGC+TGG 0.473359 8_2:-34547569 Msa1244960:CDS
ACAACTGAAGGTAGAAAAGT+TGG 0.474990 8_2:-34548017 Msa1244960:CDS
AACAAGAAGCTCCTCATCAG+TGG 0.476509 8_2:+34548577 None:intergenic
GCTTTGAACCTCTTCGTCGG+TGG 0.485096 8_2:+34547385 None:intergenic
CCGAATACCCAAACCCGAAT+GGG 0.486952 8_2:+34547282 None:intergenic
TGTGAAAGAGGATCTCTCTC+TGG 0.490458 8_2:+34548632 None:intergenic
GTTTGGTAACATGGACTTGT+CGG 0.494850 8_2:-34547423 Msa1244960:CDS
AACTAGAAGGGTCGGTGACC+CGG 0.495029 8_2:+34547348 None:intergenic
AGTCAGGGGATGCTGAATTA+CGG 0.495349 8_2:-34547479 Msa1244960:CDS
GCTTCGCGAAAACACAATCT+TGG 0.501596 8_2:-34547906 Msa1244960:CDS
TGTGACTTAAGTTTAAGGCT+AGG 0.502356 8_2:+34547113 None:intergenic
GAAGTTCGGGTTTCACAACA+TGG 0.506769 8_2:-34547576 Msa1244960:CDS
TATATTGGCAAAGCACCAAA+AGG 0.512258 8_2:-34547972 Msa1244960:CDS
GGTAAACTCAACTGTGAAAG+AGG 0.512342 8_2:+34548620 None:intergenic
CTATCATATGTGTCAATCGT+AGG 0.514871 8_2:-34547070 Msa1244960:three_prime_UTR
ATTTCTTCAGTCCAAGGGAC+AGG 0.517559 8_2:-34548118 Msa1244960:CDS
AATTCAGCATCCCCTGACTC+TGG 0.524401 8_2:+34547483 None:intergenic
GACAAAATTATCACAACTGA+AGG 0.526909 8_2:-34548029 Msa1244960:CDS
AGTCCAACATTTCGTCCACC+TGG 0.531736 8_2:+34547672 None:intergenic
TCTTTGGTTATTCAATGTGA+AGG 0.535339 8_2:-34546978 Msa1244960:three_prime_UTR
TCAACCAAAGAATGCAGCAA+TGG 0.536044 8_2:-34547716 Msa1244960:CDS
CAGATTCTTCCCCACTGATG+AGG 0.543031 8_2:-34548588 Msa1244960:CDS
CCCGAATACCCAAACCCGAA+TGG 0.543082 8_2:+34547281 None:intergenic
GTCCCAGGTGGACGAAATGT+TGG 0.543835 8_2:-34547675 Msa1244960:CDS
GTGAGGATTCAATATCTGTC+GGG 0.549879 8_2:+34547525 None:intergenic
ATGGTAACCCAAAAGTAGAA+AGG 0.551380 8_2:-34546943 Msa1244960:three_prime_UTR
ATCAGAGCTTTGCATTGCCG+CGG 0.552759 8_2:-34547631 Msa1244960:CDS
AATGGTATTTCTTCAGTCCA+AGG 0.554883 8_2:-34548124 Msa1244960:CDS
ACAAGAAGCTCCTCATCAGT+GGG 0.557935 8_2:+34548578 None:intergenic
GCTGCTTTGAACCTCTTCGT+CGG 0.558434 8_2:+34547382 None:intergenic
TTGATATAAACTAGAAGGGT+CGG 0.560325 8_2:+34547340 None:intergenic
GGTGAGGATTCAATATCTGT+CGG 0.563156 8_2:+34547524 None:intergenic
TATGTTGATATAAACTAGAA+GGG 0.564471 8_2:+34547336 None:intergenic
ATATGTGTCAATCGTAGGGT+TGG 0.566804 8_2:-34547065 Msa1244960:three_prime_UTR
AAGCAGCATGAGGACTAACC+GGG 0.566841 8_2:-34547366 Msa1244960:CDS
ACTCCGAATGCTACAGCAAG+AGG 0.568493 8_2:-34547600 Msa1244960:CDS
TCAGAGCTTTGCATTGCCGC+GGG 0.574657 8_2:-34547630 Msa1244960:CDS
TATCATATGTGTCAATCGTA+GGG 0.575496 8_2:-34547069 Msa1244960:three_prime_UTR
GACAAGTCCATGTTACCAAA+CGG 0.575738 8_2:+34547425 None:intergenic
TTTGAACCTCTTCGTCGGTG+GGG 0.576389 8_2:+34547387 None:intergenic
TTACCAAACGGTGGCACGGA+AGG 0.576728 8_2:+34547437 None:intergenic
ATCACCAATTATTTGCACAT+AGG 0.581314 8_2:+34547001 None:intergenic
TCCACCTGGGACGATGATGA+AGG 0.583175 8_2:+34547686 None:intergenic
GGATTAGGAAACCAGAGTCA+GGG 0.583546 8_2:-34547494 Msa1244960:CDS
CAAGAACCCCACCGACGAAG+AGG 0.586414 8_2:-34547393 Msa1244960:CDS
TAGGTACAACGTGTTTAATG+TGG 0.587386 8_2:+34546730 None:intergenic
ATGGTATTTCTTCAGTCCAA+GGG 0.588129 8_2:-34548123 Msa1244960:CDS
TTGAGAAAGTAACTATGGAC+TGG 0.590760 8_2:-34546836 Msa1244960:three_prime_UTR
AGGGACAGGAAATATCCAAA+TGG 0.592563 8_2:-34548104 Msa1244960:CDS
TCTGGTTACTGGAAAGCCAC+AGG 0.607999 8_2:-34548056 Msa1244960:CDS
CATGTTACCAAACGGTGGCA+CGG 0.615690 8_2:+34547433 None:intergenic
GTCCAACATTTCGTCCACCT+GGG 0.623948 8_2:+34547673 None:intergenic
TAATTACCTGGAAGAACCCA+AGG 0.624355 8_2:+34548476 None:intergenic
GTATCAGGAACATTTCGGCT+CGG 0.624906 8_2:-34546753 Msa1244960:three_prime_UTR
GTACCTAAACACAAATATTG+CGG 0.624934 8_2:-34546714 Msa1244960:three_prime_UTR
GACAGATATTGAATCCTCAC+CGG 0.626126 8_2:-34547522 Msa1244960:CDS
TCCTTGTGGATGTTACGGAA+TGG 0.637652 8_2:-34546904 Msa1244960:three_prime_UTR
GATTAGGAAACCAGAGTCAG+GGG 0.641898 8_2:-34547493 Msa1244960:CDS
TGGTAACATGGACTTGTCGG+CGG 0.643282 8_2:-34547420 Msa1244960:CDS
AAGAGGTTCAAAGCAGCATG+AGG 0.648245 8_2:-34547376 Msa1244960:CDS
CAATGAATCCGTATACTGGT+CGG 0.649423 8_2:-34546862 Msa1244960:three_prime_UTR
GTGGGGAAGAATCTGAAACC+AGG 0.652605 8_2:+34548596 None:intergenic
TCACAGTTGAGTTTACCACC+TGG 0.654718 8_2:-34548614 Msa1244960:CDS
TGGTTTCCTAATCCAAACTC+CGG 0.659176 8_2:+34547503 None:intergenic
TCCTAATCCAAACTCCGGTG+AGG 0.662436 8_2:+34547508 None:intergenic
AAGTTCGGGTTTCACAACAT+GGG 0.678618 8_2:-34547575 Msa1244960:CDS
TCCATTCCGTAACATCCACA+AGG 0.689905 8_2:+34546903 None:intergenic
ATTCGGAGTGATGTTACCCG+CGG 0.710388 8_2:+34547614 None:intergenic
AAGTCCATGTTACCAAACGG+TGG 0.730264 8_2:+34547428 None:intergenic
GGGAAGAATCTGAAACCAGG+TGG 0.741808 8_2:+34548599 None:intergenic
CAAGAAGCTCCTCATCAGTG+GGG 0.747868 8_2:+34548579 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAATAATGTATTTTTATC+GGG - chr8_2:34548004-34548023 Msa1244960:CDS 10.0%
!!! TTTTTGTTTCTTTTTTTTTT+CGG + chr8_2:34546581-34546600 None:intergenic 10.0%
!!! AATAATAATGTATTTTTATC+GGG - chr8_2:34548004-34548023 Msa1244960:CDS 10.0%
!!! CAATTTTAATATTGTTGTTA+TGG - chr8_2:34547136-34547155 Msa1244960:three_prime_UTR 15.0%
!!! TTTTGTTTCTTTTTTTTTTC+GGG + chr8_2:34546580-34546599 None:intergenic 15.0%
!!! CAATTTTAATATTGTTGTTA+TGG - chr8_2:34547136-34547155 Msa1244960:three_prime_UTR 15.0%
!!! TAATATTGTTGTTATGGTTT+TGG - chr8_2:34547142-34547161 Msa1244960:three_prime_UTR 20.0%
!! TATGTTGATATAAACTAGAA+GGG + chr8_2:34547985-34548004 None:intergenic 20.0%
!! TTATGTTGATATAAACTAGA+AGG + chr8_2:34547986-34548005 None:intergenic 20.0%
!! TATGTGTAATATACAAAAAG+AGG - chr8_2:34548179-34548198 Msa1244960:intron 20.0%
!!! TAATATTGTTGTTATGGTTT+TGG - chr8_2:34547142-34547161 Msa1244960:three_prime_UTR 20.0%
!! TATGTTGATATAAACTAGAA+GGG + chr8_2:34547985-34548004 None:intergenic 20.0%
!! TTATGTTGATATAAACTAGA+AGG + chr8_2:34547986-34548005 None:intergenic 20.0%
!! TATGTGTAATATACAAAAAG+AGG - chr8_2:34548179-34548198 Msa1244960:intron 20.0%
!!! TTCTCTGTTTTTCATCATAA+TGG - chr8_2:34546658-34546677 Msa1244960:three_prime_UTR 25.0%
!!! TCTCTGTTTTTCATCATAAT+GGG - chr8_2:34546659-34546678 Msa1244960:three_prime_UTR 25.0%
! AAGTCAATTTCAGCAATAAT+TGG + chr8_2:34546809-34546828 None:intergenic 25.0%
! CTGAAATTCTGACAATAATA+CGG - chr8_2:34547023-34547042 Msa1244960:three_prime_UTR 25.0%
!!! AAAGCACTTGTTTTCTATAT+TGG - chr8_2:34547331-34547350 Msa1244960:CDS 25.0%
!!! CAATTAGTTTTTGTTCCTTT+TGG + chr8_2:34547364-34547383 None:intergenic 25.0%
! CAAAAGGAACAAAAACTAAT+TGG - chr8_2:34547362-34547381 Msa1244960:CDS 25.0%
! TTGAAGATTCTCGTTTAATT+CGG + chr8_2:34548143-34548162 None:intergenic 25.0%
!! TTTGTTGTGACTTAAGTTTA+AGG + chr8_2:34548213-34548232 None:intergenic 25.0%
!!! TTCTCTGTTTTTCATCATAA+TGG - chr8_2:34546658-34546677 Msa1244960:three_prime_UTR 25.0%
!!! TCTCTGTTTTTCATCATAAT+GGG - chr8_2:34546659-34546678 Msa1244960:three_prime_UTR 25.0%
! AAGTCAATTTCAGCAATAAT+TGG + chr8_2:34546809-34546828 None:intergenic 25.0%
! CTGAAATTCTGACAATAATA+CGG - chr8_2:34547023-34547042 Msa1244960:three_prime_UTR 25.0%
!!! AAAGCACTTGTTTTCTATAT+TGG - chr8_2:34547331-34547350 Msa1244960:CDS 25.0%
!!! CAATTAGTTTTTGTTCCTTT+TGG + chr8_2:34547364-34547383 None:intergenic 25.0%
! CAAAAGGAACAAAAACTAAT+TGG - chr8_2:34547362-34547381 Msa1244960:CDS 25.0%
! TTGAAGATTCTCGTTTAATT+CGG + chr8_2:34548143-34548162 None:intergenic 25.0%
!! TTTGTTGTGACTTAAGTTTA+AGG + chr8_2:34548213-34548232 None:intergenic 25.0%
! CTAAATTGGTGATAATTACC+TGG + chr8_2:34546857-34546876 None:intergenic 30.0%
CAGGTAATTATCACCAATTT+AGG - chr8_2:34546855-34546874 Msa1244960:three_prime_UTR 30.0%
TAACTATTGCAAAATCACAG+TGG + chr8_2:34546970-34546989 None:intergenic 30.0%
GACAAAATTATCACAACTGA+AGG - chr8_2:34547289-34547308 Msa1244960:CDS 30.0%
CTCATCAATAAAAATGAGCA+AGG + chr8_2:34547474-34547493 None:intergenic 30.0%
CATTCTTTGGTTGAAAATGT+TGG + chr8_2:34547596-34547615 None:intergenic 30.0%
TTGATATAAACTAGAAGGGT+CGG + chr8_2:34547981-34548000 None:intergenic 30.0%
!! TAATGTATTTTTATCGGGCT+TGG - chr8_2:34548009-34548028 Msa1244960:CDS 30.0%
!! AATGTATTTTTATCGGGCTT+GGG - chr8_2:34548010-34548029 Msa1244960:CDS 30.0%
GTATTCGGGTCATTAATTAT+AGG - chr8_2:34548051-34548070 Msa1244960:CDS 30.0%
! AGAATCTTCAATGATGATGA+TGG - chr8_2:34548152-34548171 Msa1244960:intron 30.0%
TATCATATGTGTCAATCGTA+GGG - chr8_2:34548249-34548268 Msa1244960:intron 30.0%
ATCACCAATTATTTGCACAT+AGG + chr8_2:34548320-34548339 None:intergenic 30.0%
! GCAAATAATTGGTGATTCTT+TGG - chr8_2:34548324-34548343 Msa1244960:intron 30.0%
TCTTTGGTTATTCAATGTGA+AGG - chr8_2:34548340-34548359 Msa1244960:intron 30.0%
!! TGTTTTGCCTTTCTACTTTT+GGG + chr8_2:34548385-34548404 None:intergenic 30.0%
! ATGTTTTGCCTTTCTACTTT+TGG + chr8_2:34548386-34548405 None:intergenic 30.0%
! AGAAAGGCAAAACATAGTTT+TGG - chr8_2:34548391-34548410 Msa1244960:intron 30.0%
TATACAATGAATCCGTATAC+TGG - chr8_2:34548452-34548471 Msa1244960:intron 30.0%
CAACTTTGCATGACATTATT+TGG - chr8_2:34548540-34548559 Msa1244960:CDS 30.0%
GTACCTAAACACAAATATTG+CGG - chr8_2:34548604-34548623 Msa1244960:CDS 30.0%
! CTAAATTGGTGATAATTACC+TGG + chr8_2:34546857-34546876 None:intergenic 30.0%
CAGGTAATTATCACCAATTT+AGG - chr8_2:34546855-34546874 Msa1244960:three_prime_UTR 30.0%
TAACTATTGCAAAATCACAG+TGG + chr8_2:34546970-34546989 None:intergenic 30.0%
GACAAAATTATCACAACTGA+AGG - chr8_2:34547289-34547308 Msa1244960:CDS 30.0%
CTCATCAATAAAAATGAGCA+AGG + chr8_2:34547474-34547493 None:intergenic 30.0%
CATTCTTTGGTTGAAAATGT+TGG + chr8_2:34547596-34547615 None:intergenic 30.0%
TTGATATAAACTAGAAGGGT+CGG + chr8_2:34547981-34548000 None:intergenic 30.0%
!! TAATGTATTTTTATCGGGCT+TGG - chr8_2:34548009-34548028 Msa1244960:CDS 30.0%
!! AATGTATTTTTATCGGGCTT+GGG - chr8_2:34548010-34548029 Msa1244960:CDS 30.0%
GTATTCGGGTCATTAATTAT+AGG - chr8_2:34548051-34548070 Msa1244960:CDS 30.0%
! AGAATCTTCAATGATGATGA+TGG - chr8_2:34548152-34548171 Msa1244960:intron 30.0%
TATCATATGTGTCAATCGTA+GGG - chr8_2:34548249-34548268 Msa1244960:intron 30.0%
ATCACCAATTATTTGCACAT+AGG + chr8_2:34548320-34548339 None:intergenic 30.0%
! GCAAATAATTGGTGATTCTT+TGG - chr8_2:34548324-34548343 Msa1244960:intron 30.0%
TCTTTGGTTATTCAATGTGA+AGG - chr8_2:34548340-34548359 Msa1244960:intron 30.0%
!! TGTTTTGCCTTTCTACTTTT+GGG + chr8_2:34548385-34548404 None:intergenic 30.0%
! ATGTTTTGCCTTTCTACTTT+TGG + chr8_2:34548386-34548405 None:intergenic 30.0%
! AGAAAGGCAAAACATAGTTT+TGG - chr8_2:34548391-34548410 Msa1244960:intron 30.0%
TATACAATGAATCCGTATAC+TGG - chr8_2:34548452-34548471 Msa1244960:intron 30.0%
CAACTTTGCATGACATTATT+TGG - chr8_2:34548540-34548559 Msa1244960:CDS 30.0%
GTACCTAAACACAAATATTG+CGG - chr8_2:34548604-34548623 Msa1244960:CDS 30.0%
TATCTATGTCGTAAAGTTGC+AGG - chr8_2:34546767-34546786 Msa1244960:three_prime_UTR 35.0%
ACTTGTACAAGTTTGATCCT+TGG - chr8_2:34546825-34546844 Msa1244960:three_prime_UTR 35.0%
CTTGTACAAGTTTGATCCTT+GGG - chr8_2:34546826-34546845 Msa1244960:three_prime_UTR 35.0%
TCTGCAATTGCAACCTAAAT+TGG + chr8_2:34546871-34546890 None:intergenic 35.0%
!! CGAATTTTGGTGAGAAAGAA+TGG - chr8_2:34547176-34547195 Msa1244960:three_prime_UTR 35.0%
AATGGTATTTCTTCAGTCCA+AGG - chr8_2:34547194-34547213 Msa1244960:three_prime_UTR 35.0%
ATGGTATTTCTTCAGTCCAA+GGG - chr8_2:34547195-34547214 Msa1244960:three_prime_UTR 35.0%
! GATAATTTTGTCTGTTCCTG+TGG + chr8_2:34547281-34547300 None:intergenic 35.0%
ACAACTGAAGGTAGAAAAGT+TGG - chr8_2:34547301-34547320 Msa1244960:CDS 35.0%
! TATATTGGCAAAGCACCAAA+AGG - chr8_2:34547346-34547365 Msa1244960:CDS 35.0%
! TATTGATGCAGCTTGATGAT+TGG - chr8_2:34547522-34547541 Msa1244960:CDS 35.0%
! ATTGATGCAGCTTGATGATT+GGG - chr8_2:34547523-34547542 Msa1244960:CDS 35.0%
! AGCTCTGATCATCAATTTCT+AGG + chr8_2:34547676-34547695 None:intergenic 35.0%
! GTGACTTAAGTTTAAGGCTA+GGG + chr8_2:34548207-34548226 None:intergenic 35.0%
! TGTGACTTAAGTTTAAGGCT+AGG + chr8_2:34548208-34548227 None:intergenic 35.0%
CTACGATTGACACATATGAT+AGG + chr8_2:34548250-34548269 None:intergenic 35.0%
CTATCATATGTGTCAATCGT+AGG - chr8_2:34548248-34548267 Msa1244960:intron 35.0%
CATGCCTATGTGCAAATAAT+TGG - chr8_2:34548313-34548332 Msa1244960:intron 35.0%
GGTTATTCAATGTGAAGGAT+TGG - chr8_2:34548345-34548364 Msa1244960:intron 35.0%
!! TTCAATGTGAAGGATTGGTT+TGG - chr8_2:34548350-34548369 Msa1244960:intron 35.0%
ATGGTAACCCAAAAGTAGAA+AGG - chr8_2:34548375-34548394 Msa1244960:intron 35.0%
!!! AAACATAGTTTTGGTCCTTG+TGG - chr8_2:34548400-34548419 Msa1244960:intron 35.0%
GGTCATTGAGAAAGTAACTA+TGG - chr8_2:34548477-34548496 Msa1244960:intron 35.0%
TTGAGAAAGTAACTATGGAC+TGG - chr8_2:34548482-34548501 Msa1244960:intron 35.0%
!! GAGAACTACTTTTCAGCAAT+GGG + chr8_2:34548516-34548535 None:intergenic 35.0%
!! AGAGAACTACTTTTCAGCAA+TGG + chr8_2:34548517-34548536 None:intergenic 35.0%
TGACATTATTTGGCTGTATC+AGG - chr8_2:34548550-34548569 Msa1244960:CDS 35.0%
TAGGTACAACGTGTTTAATG+TGG + chr8_2:34548591-34548610 None:intergenic 35.0%
TATCTATGTCGTAAAGTTGC+AGG - chr8_2:34546767-34546786 Msa1244960:three_prime_UTR 35.0%
ACTTGTACAAGTTTGATCCT+TGG - chr8_2:34546825-34546844 Msa1244960:three_prime_UTR 35.0%
CTTGTACAAGTTTGATCCTT+GGG - chr8_2:34546826-34546845 Msa1244960:three_prime_UTR 35.0%
TCTGCAATTGCAACCTAAAT+TGG + chr8_2:34546871-34546890 None:intergenic 35.0%
!! CGAATTTTGGTGAGAAAGAA+TGG - chr8_2:34547176-34547195 Msa1244960:three_prime_UTR 35.0%
AATGGTATTTCTTCAGTCCA+AGG - chr8_2:34547194-34547213 Msa1244960:three_prime_UTR 35.0%
ATGGTATTTCTTCAGTCCAA+GGG - chr8_2:34547195-34547214 Msa1244960:three_prime_UTR 35.0%
! GATAATTTTGTCTGTTCCTG+TGG + chr8_2:34547281-34547300 None:intergenic 35.0%
ACAACTGAAGGTAGAAAAGT+TGG - chr8_2:34547301-34547320 Msa1244960:CDS 35.0%
! TATATTGGCAAAGCACCAAA+AGG - chr8_2:34547346-34547365 Msa1244960:CDS 35.0%
! TATTGATGCAGCTTGATGAT+TGG - chr8_2:34547522-34547541 Msa1244960:CDS 35.0%
! ATTGATGCAGCTTGATGATT+GGG - chr8_2:34547523-34547542 Msa1244960:CDS 35.0%
! AGCTCTGATCATCAATTTCT+AGG + chr8_2:34547676-34547695 None:intergenic 35.0%
! GTGACTTAAGTTTAAGGCTA+GGG + chr8_2:34548207-34548226 None:intergenic 35.0%
! TGTGACTTAAGTTTAAGGCT+AGG + chr8_2:34548208-34548227 None:intergenic 35.0%
CTACGATTGACACATATGAT+AGG + chr8_2:34548250-34548269 None:intergenic 35.0%
CTATCATATGTGTCAATCGT+AGG - chr8_2:34548248-34548267 Msa1244960:intron 35.0%
CATGCCTATGTGCAAATAAT+TGG - chr8_2:34548313-34548332 Msa1244960:intron 35.0%
GGTTATTCAATGTGAAGGAT+TGG - chr8_2:34548345-34548364 Msa1244960:intron 35.0%
!! TTCAATGTGAAGGATTGGTT+TGG - chr8_2:34548350-34548369 Msa1244960:intron 35.0%
ATGGTAACCCAAAAGTAGAA+AGG - chr8_2:34548375-34548394 Msa1244960:intron 35.0%
!!! AAACATAGTTTTGGTCCTTG+TGG - chr8_2:34548400-34548419 Msa1244960:intron 35.0%
GGTCATTGAGAAAGTAACTA+TGG - chr8_2:34548477-34548496 Msa1244960:intron 35.0%
TTGAGAAAGTAACTATGGAC+TGG - chr8_2:34548482-34548501 Msa1244960:intron 35.0%
!! GAGAACTACTTTTCAGCAAT+GGG + chr8_2:34548516-34548535 None:intergenic 35.0%
!! AGAGAACTACTTTTCAGCAA+TGG + chr8_2:34548517-34548536 None:intergenic 35.0%
TGACATTATTTGGCTGTATC+AGG - chr8_2:34548550-34548569 Msa1244960:CDS 35.0%
TAGGTACAACGTGTTTAATG+TGG + chr8_2:34548591-34548610 None:intergenic 35.0%
GGTAAACTCAACTGTGAAAG+AGG + chr8_2:34546701-34546720 None:intergenic 40.0%
TAATTACCTGGAAGAACCCA+AGG + chr8_2:34546845-34546864 None:intergenic 40.0%
CCGTGATTCTGACAAACTTA+CGG + chr8_2:34546943-34546962 None:intergenic 40.0%
CCGTAAGTTTGTCAGAATCA+CGG - chr8_2:34546940-34546959 Msa1244960:three_prime_UTR 40.0%
!!! TGTTGTTATGGTTTTGGTGC+AGG - chr8_2:34547148-34547167 Msa1244960:three_prime_UTR 40.0%
TTTGGATATTTCCTGTCCCT+TGG + chr8_2:34547214-34547233 None:intergenic 40.0%
AGGGACAGGAAATATCCAAA+TGG - chr8_2:34547214-34547233 Msa1244960:three_prime_UTR 40.0%
! CTGTTTGGTCTAGAACCATT+TGG + chr8_2:34547232-34547251 None:intergenic 40.0%
GAAAAACTCAAGCTCGCAAA+AGG - chr8_2:34547565-34547584 Msa1244960:CDS 40.0%
TCAACCAAAGAATGCAGCAA+TGG - chr8_2:34547602-34547621 Msa1244960:CDS 40.0%
AGAACCATTGCTGCATTCTT+TGG + chr8_2:34547609-34547628 None:intergenic 40.0%
! AAGTTCGGGTTTCACAACAT+GGG - chr8_2:34547743-34547762 Msa1244960:CDS 40.0%
! TGCTGGACTTTTCTCTGATT+GGG - chr8_2:34547766-34547785 Msa1244960:CDS 40.0%
GTGAGGATTCAATATCTGTC+GGG + chr8_2:34547796-34547815 None:intergenic 40.0%
GGTGAGGATTCAATATCTGT+CGG + chr8_2:34547797-34547816 None:intergenic 40.0%
GACAGATATTGAATCCTCAC+CGG - chr8_2:34547796-34547815 Msa1244960:intron 40.0%
TGGTTTCCTAATCCAAACTC+CGG + chr8_2:34547818-34547837 None:intergenic 40.0%
GACAAGTCCATGTTACCAAA+CGG + chr8_2:34547896-34547915 None:intergenic 40.0%
! GTTTGGTAACATGGACTTGT+CGG - chr8_2:34547895-34547914 Msa1244960:intron 40.0%
ATATGTGTCAATCGTAGGGT+TGG - chr8_2:34548253-34548272 Msa1244960:intron 40.0%
!! GTGAAGGATTGGTTTGGTTA+TGG - chr8_2:34548356-34548375 Msa1244960:intron 40.0%
TTTGGTCCTTGTGGATGTTA+CGG - chr8_2:34548409-34548428 Msa1244960:intron 40.0%
CAATGAATCCGTATACTGGT+CGG - chr8_2:34548456-34548475 Msa1244960:intron 40.0%
TGGCTGTATCAGGAACATTT+CGG - chr8_2:34548560-34548579 Msa1244960:CDS 40.0%
CAGCCGCAATATTTGTGTTT+AGG + chr8_2:34548610-34548629 None:intergenic 40.0%
!!! GCGGCTGTTTTTCAAAAGTT+TGG - chr8_2:34548623-34548642 Msa1244960:CDS 40.0%
GGTAAACTCAACTGTGAAAG+AGG + chr8_2:34546701-34546720 None:intergenic 40.0%
TAATTACCTGGAAGAACCCA+AGG + chr8_2:34546845-34546864 None:intergenic 40.0%
CCGTGATTCTGACAAACTTA+CGG + chr8_2:34546943-34546962 None:intergenic 40.0%
CCGTAAGTTTGTCAGAATCA+CGG - chr8_2:34546940-34546959 Msa1244960:three_prime_UTR 40.0%
!!! TGTTGTTATGGTTTTGGTGC+AGG - chr8_2:34547148-34547167 Msa1244960:three_prime_UTR 40.0%
TTTGGATATTTCCTGTCCCT+TGG + chr8_2:34547214-34547233 None:intergenic 40.0%
AGGGACAGGAAATATCCAAA+TGG - chr8_2:34547214-34547233 Msa1244960:three_prime_UTR 40.0%
! CTGTTTGGTCTAGAACCATT+TGG + chr8_2:34547232-34547251 None:intergenic 40.0%
GAAAAACTCAAGCTCGCAAA+AGG - chr8_2:34547565-34547584 Msa1244960:CDS 40.0%
TCAACCAAAGAATGCAGCAA+TGG - chr8_2:34547602-34547621 Msa1244960:CDS 40.0%
AGAACCATTGCTGCATTCTT+TGG + chr8_2:34547609-34547628 None:intergenic 40.0%
! AAGTTCGGGTTTCACAACAT+GGG - chr8_2:34547743-34547762 Msa1244960:CDS 40.0%
! TGCTGGACTTTTCTCTGATT+GGG - chr8_2:34547766-34547785 Msa1244960:CDS 40.0%
GTGAGGATTCAATATCTGTC+GGG + chr8_2:34547796-34547815 None:intergenic 40.0%
GGTGAGGATTCAATATCTGT+CGG + chr8_2:34547797-34547816 None:intergenic 40.0%
GACAGATATTGAATCCTCAC+CGG - chr8_2:34547796-34547815 Msa1244960:intron 40.0%
TGGTTTCCTAATCCAAACTC+CGG + chr8_2:34547818-34547837 None:intergenic 40.0%
GACAAGTCCATGTTACCAAA+CGG + chr8_2:34547896-34547915 None:intergenic 40.0%
! GTTTGGTAACATGGACTTGT+CGG - chr8_2:34547895-34547914 Msa1244960:intron 40.0%
ATATGTGTCAATCGTAGGGT+TGG - chr8_2:34548253-34548272 Msa1244960:intron 40.0%
!! GTGAAGGATTGGTTTGGTTA+TGG - chr8_2:34548356-34548375 Msa1244960:intron 40.0%
TTTGGTCCTTGTGGATGTTA+CGG - chr8_2:34548409-34548428 Msa1244960:intron 40.0%
CAATGAATCCGTATACTGGT+CGG - chr8_2:34548456-34548475 Msa1244960:intron 40.0%
TGGCTGTATCAGGAACATTT+CGG - chr8_2:34548560-34548579 Msa1244960:CDS 40.0%
CAGCCGCAATATTTGTGTTT+AGG + chr8_2:34548610-34548629 None:intergenic 40.0%
!!! GCGGCTGTTTTTCAAAAGTT+TGG - chr8_2:34548623-34548642 Msa1244960:CDS 40.0%
TGTGAAAGAGGATCTCTCTC+TGG + chr8_2:34546689-34546708 None:intergenic 45.0%
TCACAGTTGAGTTTACCACC+TGG - chr8_2:34546704-34546723 Msa1244960:three_prime_UTR 45.0%
ACAAGAAGCTCCTCATCAGT+GGG + chr8_2:34546743-34546762 None:intergenic 45.0%
AACAAGAAGCTCCTCATCAG+TGG + chr8_2:34546744-34546763 None:intergenic 45.0%
TTTGATCCTTGGGTTCTTCC+AGG - chr8_2:34546836-34546855 Msa1244960:three_prime_UTR 45.0%
!!! TTATGGTTTTGGTGCAGGCA+AGG - chr8_2:34547153-34547172 Msa1244960:three_prime_UTR 45.0%
ATTTCTTCAGTCCAAGGGAC+AGG - chr8_2:34547200-34547219 Msa1244960:three_prime_UTR 45.0%
TCTAGACCAAACAGAGTTGC+TGG - chr8_2:34547238-34547257 Msa1244960:three_prime_UTR 45.0%
GCTTCGCGAAAACACAATCT+TGG - chr8_2:34547412-34547431 Msa1244960:CDS 45.0%
! TCTCCTCTTGCTGTAGCATT+CGG + chr8_2:34547724-34547743 None:intergenic 45.0%
CTACAGCAAGAGGAGAAGTT+CGG - chr8_2:34547728-34547747 Msa1244960:CDS 45.0%
TACAGCAAGAGGAGAAGTTC+GGG - chr8_2:34547729-34547748 Msa1244960:CDS 45.0%
! GAAGTTCGGGTTTCACAACA+TGG - chr8_2:34547742-34547761 Msa1244960:CDS 45.0%
! GTGCTGGACTTTTCTCTGAT+TGG - chr8_2:34547765-34547784 Msa1244960:CDS 45.0%
ATTGAATCCTCACCGGAGTT+TGG - chr8_2:34547803-34547822 Msa1244960:intron 45.0%
! TGGATTAGGAAACCAGAGTC+AGG - chr8_2:34547823-34547842 Msa1244960:intron 45.0%
GGATTAGGAAACCAGAGTCA+GGG - chr8_2:34547824-34547843 Msa1244960:intron 45.0%
GATTAGGAAACCAGAGTCAG+GGG - chr8_2:34547825-34547844 Msa1244960:intron 45.0%
AGTCAGGGGATGCTGAATTA+CGG - chr8_2:34547839-34547858 Msa1244960:intron 45.0%
AAGTCCATGTTACCAAACGG+TGG + chr8_2:34547893-34547912 None:intergenic 45.0%
AAGAGGTTCAAAGCAGCATG+AGG - chr8_2:34547942-34547961 Msa1244960:CDS 45.0%
AAAGCAGCATGAGGACTAAC+CGG - chr8_2:34547951-34547970 Msa1244960:CDS 45.0%
TCCTTGTGGATGTTACGGAA+TGG - chr8_2:34548414-34548433 Msa1244960:intron 45.0%
TCCATTCCGTAACATCCACA+AGG + chr8_2:34548418-34548437 None:intergenic 45.0%
CTCAATGACCGACCAGTATA+CGG + chr8_2:34548467-34548486 None:intergenic 45.0%
GTATCAGGAACATTTCGGCT+CGG - chr8_2:34548565-34548584 Msa1244960:CDS 45.0%
TGTGAAAGAGGATCTCTCTC+TGG + chr8_2:34546689-34546708 None:intergenic 45.0%
TCACAGTTGAGTTTACCACC+TGG - chr8_2:34546704-34546723 Msa1244960:three_prime_UTR 45.0%
ACAAGAAGCTCCTCATCAGT+GGG + chr8_2:34546743-34546762 None:intergenic 45.0%
AACAAGAAGCTCCTCATCAG+TGG + chr8_2:34546744-34546763 None:intergenic 45.0%
TTTGATCCTTGGGTTCTTCC+AGG - chr8_2:34546836-34546855 Msa1244960:three_prime_UTR 45.0%
!!! TTATGGTTTTGGTGCAGGCA+AGG - chr8_2:34547153-34547172 Msa1244960:three_prime_UTR 45.0%
ATTTCTTCAGTCCAAGGGAC+AGG - chr8_2:34547200-34547219 Msa1244960:three_prime_UTR 45.0%
TCTAGACCAAACAGAGTTGC+TGG - chr8_2:34547238-34547257 Msa1244960:three_prime_UTR 45.0%
GCTTCGCGAAAACACAATCT+TGG - chr8_2:34547412-34547431 Msa1244960:CDS 45.0%
! TCTCCTCTTGCTGTAGCATT+CGG + chr8_2:34547724-34547743 None:intergenic 45.0%
CTACAGCAAGAGGAGAAGTT+CGG - chr8_2:34547728-34547747 Msa1244960:CDS 45.0%
TACAGCAAGAGGAGAAGTTC+GGG - chr8_2:34547729-34547748 Msa1244960:CDS 45.0%
! GAAGTTCGGGTTTCACAACA+TGG - chr8_2:34547742-34547761 Msa1244960:CDS 45.0%
! GTGCTGGACTTTTCTCTGAT+TGG - chr8_2:34547765-34547784 Msa1244960:CDS 45.0%
ATTGAATCCTCACCGGAGTT+TGG - chr8_2:34547803-34547822 Msa1244960:intron 45.0%
! TGGATTAGGAAACCAGAGTC+AGG - chr8_2:34547823-34547842 Msa1244960:intron 45.0%
GGATTAGGAAACCAGAGTCA+GGG - chr8_2:34547824-34547843 Msa1244960:intron 45.0%
GATTAGGAAACCAGAGTCAG+GGG - chr8_2:34547825-34547844 Msa1244960:intron 45.0%
AGTCAGGGGATGCTGAATTA+CGG - chr8_2:34547839-34547858 Msa1244960:intron 45.0%
AAGTCCATGTTACCAAACGG+TGG + chr8_2:34547893-34547912 None:intergenic 45.0%
AAGAGGTTCAAAGCAGCATG+AGG - chr8_2:34547942-34547961 Msa1244960:CDS 45.0%
AAAGCAGCATGAGGACTAAC+CGG - chr8_2:34547951-34547970 Msa1244960:CDS 45.0%
TCCTTGTGGATGTTACGGAA+TGG - chr8_2:34548414-34548433 Msa1244960:intron 45.0%
TCCATTCCGTAACATCCACA+AGG + chr8_2:34548418-34548437 None:intergenic 45.0%
CTCAATGACCGACCAGTATA+CGG + chr8_2:34548467-34548486 None:intergenic 45.0%
GTATCAGGAACATTTCGGCT+CGG - chr8_2:34548565-34548584 Msa1244960:CDS 45.0%
!!! TAATAATAATGTATTTTTAT+CGG - chr8_2:34548003-34548022 Msa1244960:CDS 5.0%
!!! TAATAATAATGTATTTTTAT+CGG - chr8_2:34548003-34548022 Msa1244960:CDS 5.0%
! GGGAAGAATCTGAAACCAGG+TGG + chr8_2:34546722-34546741 None:intergenic 50.0%
! GTGGGGAAGAATCTGAAACC+AGG + chr8_2:34546725-34546744 None:intergenic 50.0%
CAGATTCTTCCCCACTGATG+AGG - chr8_2:34546730-34546749 Msa1244960:three_prime_UTR 50.0%
CAAGAAGCTCCTCATCAGTG+GGG + chr8_2:34546742-34546761 None:intergenic 50.0%
CCAGAACCAGCAACTCTGTT+TGG + chr8_2:34547247-34547266 None:intergenic 50.0%
!! CCAAACAGAGTTGCTGGTTC+TGG - chr8_2:34547244-34547263 Msa1244960:three_prime_UTR 50.0%
!! GAGTTGCTGGTTCTGGTTAC+TGG - chr8_2:34547251-34547270 Msa1244960:three_prime_UTR 50.0%
TCTGGTTACTGGAAAGCCAC+AGG - chr8_2:34547262-34547281 Msa1244960:exon 50.0%
GTCCAACATTTCGTCCACCT+GGG + chr8_2:34547648-34547667 None:intergenic 50.0%
AGTCCAACATTTCGTCCACC+TGG + chr8_2:34547649-34547668 None:intergenic 50.0%
ATCAGAGCTTTGCATTGCCG+CGG - chr8_2:34547687-34547706 Msa1244960:CDS 50.0%
ATTCGGAGTGATGTTACCCG+CGG + chr8_2:34547707-34547726 None:intergenic 50.0%
ACTCCGAATGCTACAGCAAG+AGG - chr8_2:34547718-34547737 Msa1244960:CDS 50.0%
TCCTCACCGGAGTTTGGATT+AGG - chr8_2:34547809-34547828 Msa1244960:intron 50.0%
TCCTAATCCAAACTCCGGTG+AGG + chr8_2:34547813-34547832 None:intergenic 50.0%
AATTCAGCATCCCCTGACTC+TGG + chr8_2:34547838-34547857 None:intergenic 50.0%
CATGTTACCAAACGGTGGCA+CGG + chr8_2:34547888-34547907 None:intergenic 50.0%
TGGTAACATGGACTTGTCGG+CGG - chr8_2:34547898-34547917 Msa1244960:CDS 50.0%
TTTGAACCTCTTCGTCGGTG+GGG + chr8_2:34547934-34547953 None:intergenic 50.0%
CTTTGAACCTCTTCGTCGGT+GGG + chr8_2:34547935-34547954 None:intergenic 50.0%
! GCTGCTTTGAACCTCTTCGT+CGG + chr8_2:34547939-34547958 None:intergenic 50.0%
AAGCAGCATGAGGACTAACC+GGG - chr8_2:34547952-34547971 Msa1244960:CDS 50.0%
CCGAATACCCAAACCCGAAT+GGG + chr8_2:34548039-34548058 None:intergenic 50.0%
! CCCATTCGGGTTTGGGTATT+CGG - chr8_2:34548036-34548055 Msa1244960:CDS 50.0%
! CCATTCGGGTTTGGGTATTC+GGG - chr8_2:34548037-34548056 Msa1244960:CDS 50.0%
! GGGAAGAATCTGAAACCAGG+TGG + chr8_2:34546722-34546741 None:intergenic 50.0%
! GTGGGGAAGAATCTGAAACC+AGG + chr8_2:34546725-34546744 None:intergenic 50.0%
CAGATTCTTCCCCACTGATG+AGG - chr8_2:34546730-34546749 Msa1244960:three_prime_UTR 50.0%
CAAGAAGCTCCTCATCAGTG+GGG + chr8_2:34546742-34546761 None:intergenic 50.0%
CCAGAACCAGCAACTCTGTT+TGG + chr8_2:34547247-34547266 None:intergenic 50.0%
!! CCAAACAGAGTTGCTGGTTC+TGG - chr8_2:34547244-34547263 Msa1244960:three_prime_UTR 50.0%
!! GAGTTGCTGGTTCTGGTTAC+TGG - chr8_2:34547251-34547270 Msa1244960:three_prime_UTR 50.0%
TCTGGTTACTGGAAAGCCAC+AGG - chr8_2:34547262-34547281 Msa1244960:exon 50.0%
GTCCAACATTTCGTCCACCT+GGG + chr8_2:34547648-34547667 None:intergenic 50.0%
AGTCCAACATTTCGTCCACC+TGG + chr8_2:34547649-34547668 None:intergenic 50.0%
ATCAGAGCTTTGCATTGCCG+CGG - chr8_2:34547687-34547706 Msa1244960:CDS 50.0%
ATTCGGAGTGATGTTACCCG+CGG + chr8_2:34547707-34547726 None:intergenic 50.0%
ACTCCGAATGCTACAGCAAG+AGG - chr8_2:34547718-34547737 Msa1244960:CDS 50.0%
TCCTCACCGGAGTTTGGATT+AGG - chr8_2:34547809-34547828 Msa1244960:intron 50.0%
TCCTAATCCAAACTCCGGTG+AGG + chr8_2:34547813-34547832 None:intergenic 50.0%
AATTCAGCATCCCCTGACTC+TGG + chr8_2:34547838-34547857 None:intergenic 50.0%
CATGTTACCAAACGGTGGCA+CGG + chr8_2:34547888-34547907 None:intergenic 50.0%
TGGTAACATGGACTTGTCGG+CGG - chr8_2:34547898-34547917 Msa1244960:CDS 50.0%
TTTGAACCTCTTCGTCGGTG+GGG + chr8_2:34547934-34547953 None:intergenic 50.0%
CTTTGAACCTCTTCGTCGGT+GGG + chr8_2:34547935-34547954 None:intergenic 50.0%
! GCTGCTTTGAACCTCTTCGT+CGG + chr8_2:34547939-34547958 None:intergenic 50.0%
AAGCAGCATGAGGACTAACC+GGG - chr8_2:34547952-34547971 Msa1244960:CDS 50.0%
CCGAATACCCAAACCCGAAT+GGG + chr8_2:34548039-34548058 None:intergenic 50.0%
! CCCATTCGGGTTTGGGTATT+CGG - chr8_2:34548036-34548055 Msa1244960:CDS 50.0%
! CCATTCGGGTTTGGGTATTC+GGG - chr8_2:34548037-34548056 Msa1244960:CDS 50.0%
! GGTGCAGGCAAGGCGAATTT+TGG - chr8_2:34547163-34547182 Msa1244960:three_prime_UTR 55.0%
TTCGCCTTCATCATCGTCCC+AGG - chr8_2:34547628-34547647 Msa1244960:CDS 55.0%
TCCACCTGGGACGATGATGA+AGG + chr8_2:34547635-34547654 None:intergenic 55.0%
GTCCCAGGTGGACGAAATGT+TGG - chr8_2:34547643-34547662 Msa1244960:CDS 55.0%
TCAGAGCTTTGCATTGCCGC+GGG - chr8_2:34547688-34547707 Msa1244960:CDS 55.0%
GGGTTTCACAACATGGGTGC+TGG - chr8_2:34547749-34547768 Msa1244960:CDS 55.0%
TTACCAAACGGTGGCACGGA+AGG + chr8_2:34547884-34547903 None:intergenic 55.0%
! CGTGCCACCGTTTGGTAACA+TGG - chr8_2:34547886-34547905 Msa1244960:intron 55.0%
! GCTTTGAACCTCTTCGTCGG+TGG + chr8_2:34547936-34547955 None:intergenic 55.0%
AACTAGAAGGGTCGGTGACC+CGG + chr8_2:34547973-34547992 None:intergenic 55.0%
! TTGGGTGACCCATTCGGGTT+TGG - chr8_2:34548028-34548047 Msa1244960:CDS 55.0%
! TGGGTGACCCATTCGGGTTT+GGG - chr8_2:34548029-34548048 Msa1244960:CDS 55.0%
CCCGAATACCCAAACCCGAA+TGG + chr8_2:34548040-34548059 None:intergenic 55.0%
! GGTGCAGGCAAGGCGAATTT+TGG - chr8_2:34547163-34547182 Msa1244960:three_prime_UTR 55.0%
TTCGCCTTCATCATCGTCCC+AGG - chr8_2:34547628-34547647 Msa1244960:CDS 55.0%
TCCACCTGGGACGATGATGA+AGG + chr8_2:34547635-34547654 None:intergenic 55.0%
GTCCCAGGTGGACGAAATGT+TGG - chr8_2:34547643-34547662 Msa1244960:CDS 55.0%
TCAGAGCTTTGCATTGCCGC+GGG - chr8_2:34547688-34547707 Msa1244960:CDS 55.0%
GGGTTTCACAACATGGGTGC+TGG - chr8_2:34547749-34547768 Msa1244960:CDS 55.0%
TTACCAAACGGTGGCACGGA+AGG + chr8_2:34547884-34547903 None:intergenic 55.0%
! CGTGCCACCGTTTGGTAACA+TGG - chr8_2:34547886-34547905 Msa1244960:intron 55.0%
! GCTTTGAACCTCTTCGTCGG+TGG + chr8_2:34547936-34547955 None:intergenic 55.0%
AACTAGAAGGGTCGGTGACC+CGG + chr8_2:34547973-34547992 None:intergenic 55.0%
! TTGGGTGACCCATTCGGGTT+TGG - chr8_2:34548028-34548047 Msa1244960:CDS 55.0%
! TGGGTGACCCATTCGGGTTT+GGG - chr8_2:34548029-34548048 Msa1244960:CDS 55.0%
CCCGAATACCCAAACCCGAA+TGG + chr8_2:34548040-34548059 None:intergenic 55.0%
GCCTTCATCATCGTCCCAGG+TGG - chr8_2:34547631-34547650 Msa1244960:CDS 60.0%
GTTCCTTCCGTGCCACCGTT+TGG - chr8_2:34547878-34547897 Msa1244960:intron 60.0%
CTCTTCGTCGGTGGGGTTCT+TGG + chr8_2:34547927-34547946 None:intergenic 60.0%
CAAGAACCCCACCGACGAAG+AGG - chr8_2:34547925-34547944 Msa1244960:CDS 60.0%
TCGGGCTTGGGTGACCCATT+CGG - chr8_2:34548022-34548041 Msa1244960:CDS 60.0%
GCCTTCATCATCGTCCCAGG+TGG - chr8_2:34547631-34547650 Msa1244960:CDS 60.0%
GTTCCTTCCGTGCCACCGTT+TGG - chr8_2:34547878-34547897 Msa1244960:intron 60.0%
CTCTTCGTCGGTGGGGTTCT+TGG + chr8_2:34547927-34547946 None:intergenic 60.0%
CAAGAACCCCACCGACGAAG+AGG - chr8_2:34547925-34547944 Msa1244960:CDS 60.0%
TCGGGCTTGGGTGACCCATT+CGG - chr8_2:34548022-34548041 Msa1244960:CDS 60.0%
CGGGCTTGGGTGACCCATTC+GGG - chr8_2:34548023-34548042 Msa1244960:CDS 65.0%
CGGGCTTGGGTGACCCATTC+GGG - chr8_2:34548023-34548042 Msa1244960:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 34546580 34548760 34546580 ID=Msa1244960;Name=Msa1244960
chr8_2 mRNA 34546580 34548760 34546580 ID=Msa1244960-mRNA-1;Parent=Msa1244960;Name=Msa1244960-mRNA-1;_AED=0.04;_eAED=0.04;_QI=97|1|1|1|1|1|3|694|329
chr8_2 exon 34546580 34547807 34546580 ID=Msa1244960-mRNA-1:exon:10980;Parent=Msa1244960-mRNA-1
chr8_2 exon 34547896 34548170 34547896 ID=Msa1244960-mRNA-1:exon:10979;Parent=Msa1244960-mRNA-1
chr8_2 exon 34548483 34548760 34548483 ID=Msa1244960-mRNA-1:exon:10978;Parent=Msa1244960-mRNA-1
chr8_2 five_prime_UTR 34548664 34548760 34548664 ID=Msa1244960-mRNA-1:five_prime_utr;Parent=Msa1244960-mRNA-1
chr8_2 CDS 34548483 34548663 34548483 ID=Msa1244960-mRNA-1:cds;Parent=Msa1244960-mRNA-1
chr8_2 CDS 34547896 34548170 34547896 ID=Msa1244960-mRNA-1:cds;Parent=Msa1244960-mRNA-1
chr8_2 CDS 34547274 34547807 34547274 ID=Msa1244960-mRNA-1:cds;Parent=Msa1244960-mRNA-1
chr8_2 three_prime_UTR 34546580 34547273 34546580 ID=Msa1244960-mRNA-1:three_prime_utr;Parent=Msa1244960-mRNA-1
Gene Sequence

>Msa1244960

ATGGGAGTTCCAGAGAGAGATCCTCTTTCACAGTTGAGTTTACCACCTGGTTTCAGATTCTTCCCCACTGATGAGGAGCTTCTTGTTCAGTATCTATGTCGTAAAGTTGCAGGACATCATTTTTCTTTGCCAATTATTGCTGAAATTGACTTGTACAAGTTTGATCCTTGGGTTCTTCCAGGCAAGGCGAATTTTGGTGAGAAAGAATGGTATTTCTTCAGTCCAAGGGACAGGAAATATCCAAATGGTTCTAGACCAAACAGAGTTGCTGGTTCTGGTTACTGGAAAGCCACAGGAACAGACAAAATTATCACAACTGAAGGTAGAAAAGTTGGCATAAAAAAAGCACTTGTTTTCTATATTGGCAAAGCACCAAAAGGAACAAAAACTAATTGGATTATGCATGAGTATCGTCTTCTTGATGCTTCGCGAAAACACAATCTTGGTAGCACAAAACTTGATGATTGGGTTTTGTGTCGAATATACAAGAAAAACTCAAGCTCGCAAAAGGAAATTCCAACATTTTCAACCAAAGAATGCAGCAATGGTTCTTCGCCTTCATCATCGTCCCAGGTGGACGAAATGTTGGACTCGTTCCTAGAAATTGATGATCAGAGCTTTGCATTGCCGCGGGTAACATCACTCCGAATGCTACAGCAAGAGGAGAAGTTCGGGTTTCACAACATGGGTGCTGGACTTTTCTCTGATTGGGTTAACCCGACAGATATTGAATCCTCACCGGAGTTTGGATTAGGAAACCAGAGTCAGGGGATGCTGAATTACGGTTGTAATGACTATTGTGTTCCTTCCGTGCCACCGTTTGGTAACATGGACTTGTCGGCGGAGTCCAAGAACCCCACCGACGAAGAGGTTCAAAGCAGCATGAGGACTAACCGGGTCACCGACCCTTCTAGTTTATATCAACATAATAATAATGTATTTTTATCGGGCTTGGGTGACCCATTCGGGTTTGGGTATTCGGGTCATTAA
Protein sequence

>Msa1244960

MGVPERDPLSQLSLPPGFRFFPTDEELLVQYLCRKVAGHHFSLPIIAEIDLYKFDPWVLPGKANFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYIGKAPKGTKTNWIMHEYRLLDASRKHNLGSTKLDDWVLCRIYKKNSSSQKEIPTFSTKECSNGSSPSSSSQVDEMLDSFLEIDDQSFALPRVTSLRMLQQEEKFGFHNMGAGLFSDWVNPTDIESSPEFGLGNQSQGMLNYGCNDYCVPSVPPFGNMDLSAESKNPTDEEVQSSMRTNRVTDPSSLYQHNNNVFLSGLGDPFGFGYSGH*