Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1404290 | XP_013458449.1 | 97.466 | 513 | 13 | 0 | 1 | 513 | 1 | 513 | 0.0 | 1038 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1404290 | sp|O04719|P2C77_ARATH | 59.659 | 352 | 125 | 8 | 169 | 513 | 80 | 421 | 4.18e-139 | 410 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1404290 | A0A072V2X5 | 97.466 | 513 | 13 | 0 | 1 | 513 | 1 | 513 | 0.0 | 1038 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0001830 | Msa1404290 | 0.802516 | 5.406505e-49 | -8.615850e-47 |
Msa0015090 | Msa1404290 | 0.828904 | 6.935911e-55 | -8.615850e-47 |
Msa0026630 | Msa1404290 | 0.807537 | 4.815775e-50 | -8.615850e-47 |
Msa0038870 | Msa1404290 | 0.815012 | 1.149454e-51 | -8.615850e-47 |
Msa0049750 | Msa1404290 | 0.818205 | 2.213400e-52 | -8.615850e-47 |
Msa0082420 | Msa1404290 | 0.843591 | 1.275664e-58 | -8.615850e-47 |
Msa0118540 | Msa1404290 | 0.818325 | 2.079581e-52 | -8.615850e-47 |
Msa1370810 | Msa1404290 | 0.833644 | 4.738562e-56 | -8.615850e-47 |
Msa1378410 | Msa1404290 | 0.803775 | 2.967188e-49 | -8.615850e-47 |
Msa1404290 | Msa1411410 | 0.804540 | 2.057088e-49 | -8.615850e-47 |
Msa1404290 | Msa1437330 | 0.811209 | 7.851097e-51 | -8.615850e-47 |
Msa1404290 | Msa1438840 | 0.838687 | 2.479301e-57 | -8.615850e-47 |
Msa0604290 | Msa1404290 | 0.835826 | 1.338397e-56 | -8.615850e-47 |
Msa0623990 | Msa1404290 | 0.803578 | 3.261218e-49 | -8.615850e-47 |
Msa0624060 | Msa1404290 | 0.801491 | 8.782858e-49 | -8.615850e-47 |
Msa0645530 | Msa1404290 | 0.814113 | 1.817612e-51 | -8.615850e-47 |
Msa0662540 | Msa1404290 | 0.962885 | 2.056628e-121 | -8.615850e-47 |
Msa0685090 | Msa1404290 | 0.815081 | 1.109473e-51 | -8.615850e-47 |
Msa0750850 | Msa1404290 | 0.802938 | 4.424205e-49 | -8.615850e-47 |
Msa0127640 | Msa1404290 | 0.805075 | 1.590167e-49 | -8.615850e-47 |
Msa0130130 | Msa1404290 | 0.807705 | 4.436492e-50 | -8.615850e-47 |
Msa0189030 | Msa1404290 | 0.814929 | 1.199314e-51 | -8.615850e-47 |
Msa0196670 | Msa1404290 | 0.816992 | 4.154180e-52 | -8.615850e-47 |
Msa0218370 | Msa1404290 | 0.842341 | 2.743252e-58 | -8.615850e-47 |
Msa0236420 | Msa1404290 | 0.804827 | 1.791898e-49 | -8.615850e-47 |
Msa1240970 | Msa1404290 | 0.835145 | 1.990082e-56 | -8.615850e-47 |
Msa1266150 | Msa1404290 | 0.987511 | 1.595181e-170 | -8.615850e-47 |
Msa1307180 | Msa1404290 | 0.801761 | 7.728570e-49 | -8.615850e-47 |
Msa1316360 | Msa1404290 | 0.807493 | 4.919973e-50 | -8.615850e-47 |
Msa1316460 | Msa1404290 | 0.801737 | 7.818835e-49 | -8.615850e-47 |
Msa0388730 | Msa1404290 | 0.831142 | 1.973736e-55 | -8.615850e-47 |
Msa0450480 | Msa1404290 | 0.800765 | 1.235948e-48 | -8.615850e-47 |
Msa0985180 | Msa1404290 | 0.809687 | 1.672734e-50 | -8.615850e-47 |
Msa1023310 | Msa1404290 | 0.830381 | 3.032505e-55 | -8.615850e-47 |
Msa1062040 | Msa1404290 | 0.826579 | 2.510072e-54 | -8.615850e-47 |
Msa1070520 | Msa1404290 | 0.809750 | 1.621708e-50 | -8.615850e-47 |
Msa1071320 | Msa1404290 | 0.830271 | 3.226925e-55 | -8.615850e-47 |
Msa1101220 | Msa1404290 | 0.822113 | 2.818661e-53 | -8.615850e-47 |
Msa0256390 | Msa1404290 | 0.807056 | 6.089584e-50 | -8.615850e-47 |
Msa0270960 | Msa1404290 | 0.806118 | 9.607492e-50 | -8.615850e-47 |
Msa0295820 | Msa1404290 | 0.802153 | 6.421070e-49 | -8.615850e-47 |
Msa0308440 | Msa1404290 | 0.801871 | 7.338405e-49 | -8.615850e-47 |
Msa0309270 | Msa1404290 | 0.805641 | 1.209917e-49 | -8.615850e-47 |
Msa1107200 | Msa1404290 | 0.840242 | 9.782772e-58 | -8.615850e-47 |
Msa1150780 | Msa1404290 | 0.830788 | 2.410991e-55 | -8.615850e-47 |
Msa1158370 | Msa1404290 | 0.810770 | 9.770730e-51 | -8.615850e-47 |
Msa1208370 | Msa1404290 | 0.822663 | 2.099529e-53 | -8.615850e-47 |
Msa1208380 | Msa1404290 | 0.822406 | 2.409057e-53 | -8.615850e-47 |
Msa1220930 | Msa1404290 | 0.999627 | 0.000000e+00 | -8.615850e-47 |
Msa0542560 | Msa1404290 | 0.827873 | 1.230275e-54 | -8.615850e-47 |
Msa0844110 | Msa1404290 | 0.806018 | 1.008199e-49 | -8.615850e-47 |
Msa0861470 | Msa1404290 | 0.819380 | 1.197287e-52 | -8.615850e-47 |
Msa0861570 | Msa1404290 | 0.829283 | 5.613180e-55 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1404290 | MtrunA17_Chr4g0070871 | 97.466 | 513 | 13 | 0 | 1 | 513 | 1 | 513 | 0.0 | 1038 |
Msa1404290 | MtrunA17_Chr2g0299981 | 57.570 | 568 | 163 | 12 | 1 | 513 | 1 | 545 | 0.0 | 597 |
Msa1404290 | MtrunA17_Chr3g0135961 | 46.195 | 565 | 236 | 13 | 1 | 513 | 1 | 549 | 2.71e-154 | 451 |
Msa1404290 | MtrunA17_Chr1g0150781 | 46.057 | 558 | 251 | 12 | 1 | 513 | 1 | 553 | 1.21e-145 | 429 |
Msa1404290 | MtrunA17_Chr8g0389921 | 46.984 | 315 | 136 | 5 | 204 | 508 | 146 | 439 | 6.05e-87 | 275 |
Msa1404290 | MtrunA17_Chr3g0112291 | 45.317 | 331 | 131 | 7 | 192 | 504 | 78 | 376 | 9.91e-86 | 270 |
Msa1404290 | MtrunA17_Chr1g0158781 | 46.224 | 331 | 136 | 8 | 182 | 508 | 92 | 384 | 6.87e-74 | 239 |
Msa1404290 | MtrunA17_Chr5g0435721 | 47.440 | 293 | 126 | 5 | 205 | 490 | 191 | 462 | 1.49e-73 | 241 |
Msa1404290 | MtrunA17_Chr5g0396731 | 44.444 | 306 | 131 | 5 | 208 | 503 | 74 | 350 | 4.51e-71 | 230 |
Msa1404290 | MtrunA17_Chr1g0150451 | 37.299 | 311 | 130 | 10 | 198 | 501 | 69 | 321 | 6.63e-45 | 160 |
Msa1404290 | MtrunA17_Chr5g0430481 | 39.370 | 254 | 120 | 6 | 253 | 504 | 154 | 375 | 6.91e-45 | 162 |
Msa1404290 | MtrunA17_Chr3g0136711 | 37.086 | 302 | 125 | 10 | 207 | 501 | 35 | 278 | 7.26e-45 | 159 |
Msa1404290 | MtrunA17_Chr3g0105371 | 35.216 | 301 | 143 | 8 | 208 | 504 | 87 | 339 | 3.72e-44 | 159 |
Msa1404290 | MtrunA17_Chr3g0126511 | 36.242 | 298 | 131 | 6 | 208 | 501 | 96 | 338 | 1.44e-43 | 158 |
Msa1404290 | MtrunA17_Chr1g0212961 | 36.149 | 296 | 132 | 8 | 207 | 501 | 96 | 335 | 1.53e-43 | 157 |
Msa1404290 | MtrunA17_Chr3g0105351 | 34.219 | 301 | 146 | 7 | 208 | 504 | 63 | 315 | 2.04e-43 | 156 |
Msa1404290 | MtrunA17_Chr4g0050381 | 35.599 | 309 | 129 | 11 | 207 | 505 | 30 | 278 | 1.58e-37 | 139 |
Msa1404290 | MtrunA17_Chr1g0171571 | 34.084 | 311 | 153 | 12 | 207 | 511 | 388 | 652 | 7.70e-33 | 132 |
Msa1404290 | MtrunA17_Chr2g0279151 | 36.923 | 260 | 119 | 7 | 250 | 504 | 62 | 281 | 1.24e-32 | 125 |
Msa1404290 | MtrunA17_Chr3g0136811 | 32.759 | 290 | 127 | 10 | 207 | 450 | 24 | 291 | 3.69e-31 | 124 |
Msa1404290 | MtrunA17_Chr3g0115851 | 33.115 | 305 | 140 | 11 | 207 | 504 | 35 | 282 | 4.40e-31 | 121 |
Msa1404290 | MtrunA17_Chr8g0360351 | 34.962 | 266 | 124 | 9 | 241 | 501 | 58 | 279 | 7.84e-31 | 121 |
Msa1404290 | MtrunA17_Chr4g0051661 | 37.945 | 253 | 113 | 8 | 253 | 501 | 183 | 395 | 8.60e-31 | 123 |
Msa1404290 | MtrunA17_Chr1g0150071 | 32.313 | 294 | 133 | 11 | 207 | 455 | 24 | 296 | 1.31e-30 | 122 |
Msa1404290 | MtrunA17_Chr5g0426141 | 36.015 | 261 | 120 | 8 | 250 | 504 | 63 | 282 | 1.57e-30 | 120 |
Msa1404290 | MtrunA17_Chr2g0317021 | 35.273 | 275 | 130 | 9 | 238 | 504 | 99 | 333 | 1.73e-30 | 121 |
Msa1404290 | MtrunA17_Chr4g0001761 | 32.517 | 286 | 123 | 10 | 207 | 445 | 24 | 286 | 2.91e-30 | 121 |
Msa1404290 | MtrunA17_Chr2g0293811 | 31.159 | 276 | 158 | 9 | 241 | 509 | 87 | 337 | 1.05e-29 | 120 |
Msa1404290 | MtrunA17_Chr1g0194191 | 30.508 | 295 | 164 | 10 | 225 | 506 | 86 | 352 | 2.66e-29 | 119 |
Msa1404290 | MtrunA17_Chr4g0065141 | 28.758 | 306 | 158 | 11 | 214 | 505 | 93 | 352 | 1.08e-28 | 117 |
Msa1404290 | MtrunA17_Chr5g0407161 | 30.916 | 262 | 135 | 9 | 248 | 501 | 120 | 343 | 6.92e-28 | 115 |
Msa1404290 | MtrunA17_Chr3g0144111 | 32.734 | 278 | 113 | 11 | 238 | 501 | 8 | 225 | 2.21e-27 | 110 |
Msa1404290 | MtrunA17_Chr3g0138281 | 31.734 | 271 | 136 | 10 | 242 | 501 | 111 | 343 | 3.36e-27 | 113 |
Msa1404290 | MtrunA17_Chr1g0185141 | 29.392 | 296 | 135 | 10 | 262 | 507 | 171 | 442 | 1.92e-23 | 104 |
Msa1404290 | MtrunA17_Chr7g0225501 | 34.634 | 205 | 117 | 9 | 249 | 440 | 80 | 280 | 4.29e-23 | 102 |
Msa1404290 | MtrunA17_Chr1g0209451 | 29.392 | 296 | 153 | 10 | 220 | 503 | 46 | 297 | 1.53e-22 | 100 |
Msa1404290 | MtrunA17_Chr4g0004971 | 33.761 | 234 | 120 | 8 | 253 | 451 | 78 | 311 | 3.16e-22 | 98.2 |
Msa1404290 | MtrunA17_Chr3g0127091 | 25.000 | 332 | 171 | 9 | 207 | 503 | 61 | 349 | 4.79e-22 | 98.2 |
Msa1404290 | MtrunA17_Chr6g0483411 | 30.942 | 223 | 121 | 8 | 248 | 448 | 71 | 282 | 9.27e-22 | 96.3 |
Msa1404290 | MtrunA17_Chr1g0151781 | 32.883 | 222 | 118 | 8 | 253 | 445 | 68 | 287 | 2.99e-21 | 95.1 |
Msa1404290 | MtrunA17_Chr1g0192421 | 34.389 | 221 | 117 | 9 | 253 | 445 | 89 | 309 | 7.86e-21 | 94.0 |
Msa1404290 | MtrunA17_Chr7g0263281 | 28.516 | 256 | 124 | 7 | 231 | 445 | 54 | 291 | 9.43e-21 | 94.0 |
Msa1404290 | MtrunA17_Chr1g0211251 | 28.667 | 300 | 166 | 10 | 185 | 447 | 15 | 303 | 2.05e-20 | 93.2 |
Msa1404290 | MtrunA17_Chr7g0243571 | 32.759 | 232 | 117 | 9 | 253 | 445 | 92 | 323 | 2.56e-20 | 93.6 |
Msa1404290 | MtrunA17_Chr1g0207571 | 30.453 | 243 | 113 | 8 | 249 | 448 | 57 | 286 | 3.99e-20 | 92.4 |
Msa1404290 | MtrunA17_Chr4g0067711 | 33.032 | 221 | 120 | 8 | 253 | 445 | 91 | 311 | 7.07e-20 | 91.3 |
Msa1404290 | MtrunA17_Chr7g0250061 | 30.472 | 233 | 122 | 7 | 249 | 447 | 72 | 298 | 1.76e-19 | 90.5 |
Msa1404290 | MtrunA17_Chr3g0133801 | 29.008 | 262 | 141 | 9 | 254 | 503 | 67 | 295 | 1.78e-19 | 90.9 |
Msa1404290 | MtrunA17_Chr7g0272061 | 32.174 | 230 | 119 | 9 | 253 | 445 | 91 | 320 | 2.07e-19 | 90.1 |
Msa1404290 | MtrunA17_Chr2g0286951 | 27.055 | 292 | 147 | 9 | 249 | 505 | 83 | 343 | 2.99e-19 | 90.1 |
Msa1404290 | MtrunA17_Chr1g0153671 | 28.244 | 262 | 143 | 8 | 254 | 503 | 66 | 294 | 1.69e-18 | 87.8 |
Msa1404290 | MtrunA17_Chr1g0213351 | 29.461 | 241 | 114 | 7 | 249 | 447 | 76 | 302 | 2.11e-18 | 87.0 |
Msa1404290 | MtrunA17_Chr7g0271971 | 28.625 | 269 | 145 | 8 | 249 | 503 | 62 | 297 | 3.13e-18 | 87.0 |
Msa1404290 | MtrunA17_Chr3g0089721 | 32.159 | 227 | 120 | 7 | 253 | 448 | 68 | 291 | 5.06e-18 | 85.9 |
Msa1404290 | MtrunA17_Chr1g0181901 | 28.571 | 245 | 121 | 6 | 242 | 445 | 65 | 296 | 5.54e-18 | 86.3 |
Msa1404290 | MtrunA17_Chr7g0256771 | 29.630 | 243 | 133 | 8 | 238 | 447 | 55 | 292 | 1.36e-17 | 83.6 |
Msa1404290 | MtrunA17_Chr2g0295401 | 31.963 | 219 | 121 | 8 | 255 | 445 | 94 | 312 | 1.67e-17 | 84.3 |
Msa1404290 | MtrunA17_Chr3g0089711 | 31.718 | 227 | 121 | 7 | 253 | 448 | 68 | 291 | 1.83e-17 | 84.0 |
Msa1404290 | MtrunA17_Chr7g0256751 | 28.041 | 296 | 147 | 11 | 253 | 501 | 69 | 345 | 2.07e-17 | 84.7 |
Msa1404290 | MtrunA17_Chr8g0371321 | 28.755 | 233 | 126 | 6 | 249 | 447 | 75 | 301 | 9.96e-17 | 82.0 |
Msa1404290 | MtrunA17_Chr1g0192471 | 26.351 | 296 | 162 | 9 | 220 | 503 | 46 | 297 | 1.37e-16 | 82.0 |
Msa1404290 | MtrunA17_Chr4g0022171 | 27.092 | 251 | 137 | 8 | 236 | 445 | 84 | 329 | 1.45e-16 | 82.4 |
Msa1404290 | MtrunA17_Chr7g0221691 | 31.250 | 240 | 118 | 8 | 253 | 445 | 129 | 368 | 1.59e-16 | 82.0 |
Msa1404290 | MtrunA17_Chr2g0324061 | 27.897 | 233 | 128 | 7 | 253 | 445 | 90 | 322 | 2.50e-16 | 81.6 |
Msa1404290 | MtrunA17_Chr7g0249421 | 29.470 | 302 | 137 | 12 | 253 | 478 | 96 | 397 | 3.26e-16 | 81.3 |
Msa1404290 | MtrunA17_Chr2g0294291 | 27.778 | 234 | 130 | 5 | 249 | 448 | 71 | 299 | 3.53e-16 | 80.1 |
Msa1404290 | MtrunA17_Chr1g0175381 | 29.150 | 247 | 135 | 8 | 232 | 445 | 59 | 298 | 3.05e-15 | 77.4 |
Msa1404290 | MtrunA17_Chr7g0238501 | 26.531 | 294 | 167 | 10 | 253 | 505 | 263 | 548 | 1.77e-13 | 72.8 |
Msa1404290 | MtrunA17_Chr4g0063111 | 29.018 | 224 | 120 | 9 | 253 | 445 | 74 | 289 | 3.30e-13 | 72.0 |
Msa1404290 | MtrunA17_Chr4g0068971 | 33.113 | 151 | 72 | 6 | 365 | 509 | 110 | 237 | 1.06e-11 | 65.5 |
Msa1404290 | MtrunA17_Chr4g0039061 | 28.452 | 239 | 126 | 8 | 241 | 442 | 191 | 421 | 1.24e-11 | 67.0 |
Msa1404290 | MtrunA17_Chr4g0063051 | 25.322 | 233 | 129 | 8 | 232 | 442 | 40 | 249 | 1.27e-11 | 66.2 |
Msa1404290 | MtrunA17_Chr3g0089691 | 34.194 | 155 | 71 | 5 | 325 | 448 | 51 | 205 | 1.72e-11 | 65.5 |
Msa1404290 | MtrunA17_Chr2g0295991 | 27.236 | 246 | 138 | 9 | 302 | 513 | 248 | 486 | 2.17e-11 | 66.2 |
Msa1404290 | MtrunA17_Chr4g0067301 | 26.230 | 244 | 125 | 8 | 302 | 503 | 257 | 487 | 7.33e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1404290 | AT5G57050.1 | 59.659 | 352 | 125 | 8 | 169 | 513 | 80 | 421 | 4.25e-140 | 410 |
Msa1404290 | AT5G57050.2 | 59.659 | 352 | 125 | 8 | 169 | 513 | 40 | 381 | 5.72e-140 | 409 |
Msa1404290 | AT4G26080.1 | 61.728 | 324 | 115 | 3 | 192 | 512 | 114 | 431 | 9.91e-140 | 410 |
Msa1404290 | AT1G17550.1 | 56.571 | 350 | 130 | 3 | 183 | 513 | 165 | 511 | 2.97e-135 | 401 |
Msa1404290 | AT1G17550.2 | 56.571 | 350 | 130 | 3 | 183 | 513 | 165 | 511 | 2.97e-135 | 401 |
Msa1404290 | AT1G72770.4 | 57.307 | 349 | 128 | 3 | 183 | 513 | 166 | 511 | 4.03e-135 | 401 |
Msa1404290 | AT1G72770.1 | 57.307 | 349 | 128 | 3 | 183 | 513 | 166 | 511 | 4.03e-135 | 401 |
Msa1404290 | AT1G72770.3 | 57.307 | 349 | 128 | 3 | 183 | 513 | 166 | 511 | 4.03e-135 | 401 |
Msa1404290 | AT2G29380.1 | 45.872 | 327 | 129 | 10 | 194 | 504 | 67 | 361 | 1.55e-84 | 266 |
Msa1404290 | AT5G57050.3 | 56.250 | 240 | 91 | 7 | 169 | 404 | 80 | 309 | 4.66e-82 | 258 |
Msa1404290 | AT1G72770.2 | 53.390 | 236 | 92 | 2 | 183 | 400 | 166 | 401 | 1.62e-77 | 249 |
Msa1404290 | AT1G72770.5 | 53.390 | 236 | 92 | 2 | 183 | 400 | 166 | 401 | 1.62e-77 | 249 |
Msa1404290 | AT1G07430.1 | 41.520 | 342 | 140 | 6 | 205 | 508 | 119 | 438 | 4.06e-76 | 246 |
Msa1404290 | AT5G51760.2 | 45.370 | 324 | 149 | 4 | 198 | 504 | 70 | 382 | 3.11e-75 | 243 |
Msa1404290 | AT5G51760.1 | 45.370 | 324 | 149 | 4 | 198 | 504 | 100 | 412 | 5.67e-75 | 243 |
Msa1404290 | AT3G11410.1 | 42.994 | 314 | 112 | 8 | 175 | 447 | 56 | 343 | 5.81e-73 | 237 |
Msa1404290 | AT5G59220.1 | 48.837 | 258 | 93 | 4 | 205 | 447 | 110 | 343 | 3.74e-71 | 233 |
Msa1404290 | AT5G59220.2 | 46.919 | 211 | 73 | 4 | 205 | 400 | 110 | 296 | 4.03e-49 | 171 |
Msa1404290 | AT5G53140.1 | 36.242 | 298 | 137 | 7 | 208 | 504 | 103 | 348 | 2.45e-45 | 164 |
Msa1404290 | AT5G53140.2 | 36.242 | 298 | 137 | 7 | 208 | 504 | 103 | 348 | 2.45e-45 | 164 |
Msa1404290 | AT1G43900.1 | 36.066 | 305 | 129 | 10 | 207 | 504 | 124 | 369 | 2.53e-45 | 163 |
Msa1404290 | AT4G31750.1 | 37.086 | 302 | 125 | 9 | 207 | 501 | 34 | 277 | 9.49e-45 | 160 |
Msa1404290 | AT4G31750.3 | 37.086 | 302 | 125 | 9 | 207 | 501 | 34 | 277 | 9.49e-45 | 160 |
Msa1404290 | AT4G31750.2 | 37.086 | 302 | 125 | 9 | 207 | 501 | 34 | 277 | 1.31e-44 | 159 |
Msa1404290 | AT1G07160.1 | 37.458 | 299 | 140 | 7 | 208 | 503 | 122 | 376 | 2.15e-44 | 161 |
Msa1404290 | AT2G30020.1 | 40.157 | 254 | 118 | 6 | 254 | 504 | 171 | 393 | 2.24e-44 | 161 |
Msa1404290 | AT5G10740.1 | 37.086 | 302 | 125 | 10 | 207 | 501 | 34 | 277 | 2.54e-44 | 160 |
Msa1404290 | AT5G10740.2 | 37.086 | 302 | 125 | 10 | 207 | 501 | 34 | 277 | 2.54e-44 | 160 |
Msa1404290 | AT5G24940.1 | 36.656 | 311 | 132 | 11 | 198 | 501 | 25 | 277 | 1.89e-43 | 160 |
Msa1404290 | AT1G67820.2 | 39.044 | 251 | 122 | 7 | 194 | 442 | 72 | 293 | 5.72e-42 | 155 |
Msa1404290 | AT1G67820.1 | 39.044 | 251 | 122 | 7 | 194 | 442 | 108 | 329 | 1.54e-41 | 155 |
Msa1404290 | AT2G40180.1 | 34.169 | 319 | 165 | 8 | 190 | 504 | 109 | 386 | 3.21e-41 | 152 |
Msa1404290 | AT1G22280.3 | 34.091 | 308 | 139 | 12 | 207 | 504 | 34 | 287 | 5.78e-35 | 133 |
Msa1404290 | AT1G22280.1 | 34.426 | 305 | 136 | 12 | 207 | 504 | 34 | 281 | 3.73e-33 | 127 |
Msa1404290 | AT1G34750.2 | 35.385 | 260 | 123 | 7 | 250 | 504 | 63 | 282 | 1.77e-32 | 125 |
Msa1404290 | AT1G34750.1 | 35.385 | 260 | 123 | 7 | 250 | 504 | 63 | 282 | 1.77e-32 | 125 |
Msa1404290 | AT1G34750.3 | 35.385 | 260 | 123 | 7 | 250 | 504 | 63 | 282 | 1.77e-32 | 125 |
Msa1404290 | AT1G78200.5 | 33.333 | 276 | 138 | 8 | 237 | 504 | 1 | 238 | 1.25e-31 | 122 |
Msa1404290 | AT1G78200.4 | 33.333 | 276 | 138 | 8 | 237 | 504 | 1 | 238 | 1.25e-31 | 122 |
Msa1404290 | AT2G33700.1 | 32.296 | 257 | 129 | 6 | 253 | 501 | 123 | 342 | 3.11e-31 | 124 |
Msa1404290 | AT1G78200.1 | 32.188 | 320 | 156 | 10 | 192 | 504 | 18 | 283 | 4.34e-31 | 122 |
Msa1404290 | AT1G78200.3 | 32.188 | 320 | 156 | 10 | 192 | 504 | 18 | 283 | 4.34e-31 | 122 |
Msa1404290 | AT1G78200.2 | 32.188 | 320 | 156 | 10 | 192 | 504 | 18 | 283 | 4.34e-31 | 122 |
Msa1404290 | AT3G17250.1 | 30.241 | 291 | 158 | 8 | 238 | 512 | 141 | 402 | 1.19e-30 | 124 |
Msa1404290 | AT2G25620.1 | 31.046 | 306 | 151 | 10 | 214 | 504 | 97 | 357 | 1.23e-30 | 123 |
Msa1404290 | AT2G25620.2 | 31.046 | 306 | 151 | 10 | 214 | 504 | 97 | 357 | 1.23e-30 | 123 |
Msa1404290 | AT4G31860.3 | 32.646 | 291 | 126 | 11 | 207 | 450 | 24 | 291 | 2.50e-30 | 120 |
Msa1404290 | AT3G51470.2 | 30.851 | 282 | 145 | 9 | 233 | 501 | 37 | 281 | 4.74e-30 | 120 |
Msa1404290 | AT2G40860.4 | 32.268 | 313 | 153 | 12 | 208 | 511 | 296 | 558 | 6.62e-30 | 123 |
Msa1404290 | AT2G40860.1 | 32.268 | 313 | 153 | 12 | 208 | 511 | 394 | 656 | 8.76e-30 | 124 |
Msa1404290 | AT4G31860.1 | 32.646 | 291 | 126 | 11 | 207 | 450 | 24 | 291 | 1.10e-29 | 120 |
Msa1404290 | AT3G51470.1 | 30.142 | 282 | 147 | 9 | 233 | 501 | 81 | 325 | 1.26e-29 | 120 |
Msa1404290 | AT1G48040.1 | 33.588 | 262 | 141 | 8 | 253 | 506 | 116 | 352 | 3.63e-29 | 119 |
Msa1404290 | AT2G25070.1 | 31.615 | 291 | 129 | 11 | 207 | 450 | 24 | 291 | 4.78e-29 | 118 |
Msa1404290 | AT2G25070.2 | 31.615 | 291 | 129 | 11 | 207 | 450 | 24 | 291 | 4.78e-29 | 118 |
Msa1404290 | AT2G34740.1 | 33.212 | 274 | 135 | 9 | 238 | 503 | 101 | 334 | 1.66e-28 | 116 |
Msa1404290 | AT3G15260.2 | 34.231 | 260 | 126 | 8 | 250 | 504 | 70 | 289 | 2.85e-28 | 114 |
Msa1404290 | AT3G15260.1 | 34.231 | 260 | 126 | 8 | 250 | 504 | 70 | 289 | 2.85e-28 | 114 |
Msa1404290 | AT3G62260.3 | 31.907 | 257 | 141 | 7 | 253 | 501 | 27 | 257 | 1.23e-27 | 112 |
Msa1404290 | AT3G62260.1 | 30.314 | 287 | 156 | 8 | 233 | 501 | 86 | 346 | 2.28e-27 | 114 |
Msa1404290 | AT3G62260.2 | 30.314 | 287 | 156 | 8 | 233 | 501 | 87 | 347 | 2.29e-27 | 114 |
Msa1404290 | AT4G28400.1 | 28.803 | 309 | 165 | 10 | 210 | 503 | 14 | 282 | 5.44e-27 | 110 |
Msa1404290 | AT4G28400.3 | 30.657 | 274 | 142 | 9 | 238 | 503 | 27 | 260 | 6.41e-27 | 110 |
Msa1404290 | AT1G34750.4 | 36.816 | 201 | 104 | 6 | 250 | 445 | 63 | 245 | 8.51e-27 | 109 |
Msa1404290 | AT4G31860.2 | 33.091 | 275 | 114 | 11 | 207 | 434 | 24 | 275 | 9.90e-27 | 109 |
Msa1404290 | AT4G08260.1 | 31.481 | 270 | 121 | 7 | 238 | 504 | 1 | 209 | 1.70e-25 | 104 |
Msa1404290 | AT3G16800.2 | 33.333 | 243 | 124 | 9 | 251 | 456 | 91 | 332 | 2.79e-25 | 107 |
Msa1404290 | AT3G16800.1 | 33.333 | 243 | 124 | 9 | 251 | 456 | 91 | 332 | 2.79e-25 | 107 |
Msa1404290 | AT3G16800.3 | 33.333 | 243 | 124 | 9 | 251 | 456 | 91 | 332 | 2.79e-25 | 107 |
Msa1404290 | AT2G20630.1 | 30.515 | 272 | 141 | 9 | 238 | 501 | 45 | 276 | 4.05e-25 | 105 |
Msa1404290 | AT2G40860.2 | 32.540 | 252 | 134 | 10 | 208 | 450 | 394 | 618 | 5.30e-25 | 109 |
Msa1404290 | AT2G20630.2 | 30.627 | 271 | 140 | 9 | 238 | 500 | 45 | 275 | 2.46e-24 | 103 |
Msa1404290 | AT3G16800.4 | 33.193 | 238 | 121 | 9 | 256 | 456 | 1 | 237 | 3.62e-24 | 102 |
Msa1404290 | AT3G16800.6 | 33.193 | 238 | 121 | 9 | 256 | 456 | 1 | 237 | 3.62e-24 | 102 |
Msa1404290 | AT2G34740.3 | 35.071 | 211 | 113 | 7 | 238 | 440 | 97 | 291 | 1.15e-23 | 101 |
Msa1404290 | AT2G34740.2 | 35.545 | 211 | 112 | 8 | 238 | 440 | 115 | 309 | 1.32e-23 | 102 |
Msa1404290 | AT1G68410.4 | 30.405 | 296 | 150 | 10 | 220 | 503 | 51 | 302 | 1.62e-23 | 103 |
Msa1404290 | AT1G68410.3 | 30.405 | 296 | 150 | 10 | 220 | 503 | 51 | 302 | 1.62e-23 | 103 |
Msa1404290 | AT1G68410.1 | 30.405 | 296 | 150 | 10 | 220 | 503 | 51 | 302 | 1.62e-23 | 103 |
Msa1404290 | AT1G68410.2 | 30.405 | 296 | 150 | 10 | 220 | 503 | 51 | 302 | 1.62e-23 | 103 |
Msa1404290 | AT5G26010.1 | 32.618 | 233 | 126 | 8 | 234 | 441 | 52 | 278 | 6.72e-23 | 100 |
Msa1404290 | AT3G27140.1 | 30.116 | 259 | 100 | 3 | 253 | 511 | 19 | 196 | 7.15e-23 | 98.2 |
Msa1404290 | AT4G28400.2 | 30.165 | 242 | 138 | 8 | 210 | 436 | 14 | 239 | 1.35e-22 | 97.4 |
Msa1404290 | AT5G01700.1 | 33.953 | 215 | 116 | 8 | 253 | 441 | 29 | 243 | 1.61e-21 | 96.3 |
Msa1404290 | AT1G09160.2 | 30.153 | 262 | 138 | 8 | 254 | 503 | 69 | 297 | 1.99e-21 | 97.1 |
Msa1404290 | AT1G09160.1 | 30.153 | 262 | 138 | 8 | 254 | 503 | 69 | 297 | 1.99e-21 | 97.1 |
Msa1404290 | AT5G01700.2 | 33.953 | 215 | 116 | 8 | 253 | 441 | 78 | 292 | 3.02e-21 | 95.9 |
Msa1404290 | AT3G63340.12 | 33.333 | 237 | 98 | 9 | 324 | 512 | 232 | 456 | 3.15e-21 | 97.4 |
Msa1404290 | AT1G47380.1 | 29.110 | 292 | 156 | 10 | 229 | 508 | 46 | 298 | 4.28e-21 | 96.3 |
Msa1404290 | AT3G63340.11 | 33.333 | 237 | 98 | 9 | 324 | 512 | 232 | 456 | 7.17e-21 | 97.1 |
Msa1404290 | AT3G63340.5 | 33.333 | 237 | 98 | 9 | 324 | 512 | 232 | 456 | 1.03e-20 | 96.7 |
Msa1404290 | AT3G63340.1 | 33.333 | 237 | 98 | 9 | 324 | 512 | 232 | 456 | 1.03e-20 | 96.7 |
Msa1404290 | AT3G63340.7 | 33.333 | 237 | 98 | 9 | 324 | 512 | 232 | 456 | 1.09e-20 | 96.7 |
Msa1404290 | AT3G63340.6 | 33.333 | 237 | 98 | 9 | 324 | 512 | 232 | 456 | 1.10e-20 | 96.7 |
Msa1404290 | AT3G63340.3 | 33.333 | 237 | 98 | 9 | 324 | 512 | 232 | 456 | 1.10e-20 | 96.7 |
Msa1404290 | AT3G63340.10 | 33.333 | 237 | 98 | 9 | 324 | 512 | 232 | 456 | 1.10e-20 | 96.7 |
Msa1404290 | AT3G63340.4 | 33.333 | 237 | 98 | 9 | 324 | 512 | 232 | 456 | 1.10e-20 | 96.7 |
Msa1404290 | AT3G63340.8 | 33.333 | 237 | 98 | 9 | 324 | 512 | 232 | 456 | 1.13e-20 | 96.7 |
Msa1404290 | AT3G63320.2 | 32.456 | 228 | 96 | 8 | 324 | 505 | 84 | 299 | 2.35e-20 | 93.2 |
Msa1404290 | AT1G79630.2 | 30.651 | 261 | 113 | 8 | 253 | 445 | 28 | 288 | 2.57e-20 | 94.0 |
Msa1404290 | AT1G79630.7 | 30.651 | 261 | 113 | 8 | 253 | 445 | 28 | 288 | 2.57e-20 | 94.0 |
Msa1404290 | AT4G38520.2 | 28.523 | 298 | 169 | 9 | 185 | 447 | 15 | 303 | 5.25e-20 | 92.4 |
Msa1404290 | AT4G38520.1 | 28.523 | 298 | 169 | 9 | 185 | 447 | 15 | 303 | 5.25e-20 | 92.4 |
Msa1404290 | AT3G63320.1 | 32.456 | 228 | 96 | 8 | 324 | 505 | 167 | 382 | 7.03e-20 | 92.4 |
Msa1404290 | AT1G79630.1 | 30.651 | 261 | 113 | 8 | 253 | 445 | 98 | 358 | 8.00e-20 | 92.8 |
Msa1404290 | AT1G79630.8 | 30.651 | 261 | 113 | 8 | 253 | 445 | 94 | 354 | 8.84e-20 | 92.8 |
Msa1404290 | AT5G02760.1 | 30.738 | 244 | 115 | 8 | 242 | 445 | 61 | 290 | 1.71e-19 | 90.5 |
Msa1404290 | AT4G32950.1 | 31.944 | 216 | 114 | 7 | 255 | 448 | 74 | 278 | 1.85e-19 | 89.7 |
Msa1404290 | AT4G27800.1 | 26.190 | 336 | 162 | 10 | 207 | 503 | 60 | 348 | 2.06e-19 | 90.5 |
Msa1404290 | AT5G27930.1 | 32.883 | 222 | 120 | 8 | 253 | 445 | 92 | 313 | 2.30e-19 | 90.5 |
Msa1404290 | AT5G27930.2 | 32.883 | 222 | 120 | 8 | 253 | 445 | 92 | 313 | 2.30e-19 | 90.5 |
Msa1404290 | AT3G63340.2 | 40.123 | 162 | 80 | 7 | 356 | 512 | 340 | 489 | 5.80e-19 | 91.3 |
Msa1404290 | AT3G12620.2 | 29.461 | 241 | 110 | 7 | 249 | 445 | 79 | 303 | 9.84e-19 | 88.6 |
Msa1404290 | AT3G12620.1 | 29.461 | 241 | 110 | 7 | 249 | 445 | 79 | 303 | 9.84e-19 | 88.6 |
Msa1404290 | AT3G55050.1 | 28.179 | 291 | 138 | 9 | 204 | 445 | 36 | 304 | 1.81e-18 | 87.8 |
Msa1404290 | AT3G55050.2 | 28.179 | 291 | 138 | 9 | 204 | 445 | 36 | 304 | 1.81e-18 | 87.8 |
Msa1404290 | AT3G17090.2 | 31.278 | 227 | 116 | 7 | 253 | 445 | 84 | 304 | 2.87e-18 | 86.3 |
Msa1404290 | AT3G17090.1 | 31.278 | 227 | 116 | 7 | 253 | 445 | 84 | 304 | 4.09e-18 | 86.7 |
Msa1404290 | AT2G05050.1 | 29.880 | 251 | 96 | 7 | 254 | 504 | 20 | 190 | 4.40e-18 | 82.8 |
Msa1404290 | AT1G16220.1 | 29.583 | 240 | 119 | 8 | 255 | 445 | 97 | 335 | 8.02e-18 | 86.7 |
Msa1404290 | AT3G05640.2 | 31.944 | 216 | 124 | 7 | 253 | 445 | 93 | 308 | 8.90e-18 | 85.5 |
Msa1404290 | AT3G05640.1 | 31.944 | 216 | 124 | 7 | 253 | 445 | 93 | 308 | 8.90e-18 | 85.5 |
Msa1404290 | AT3G05640.3 | 31.944 | 216 | 124 | 7 | 253 | 445 | 93 | 308 | 8.90e-18 | 85.5 |
Msa1404290 | AT1G79630.6 | 37.267 | 161 | 81 | 5 | 304 | 445 | 89 | 248 | 9.15e-18 | 85.9 |
Msa1404290 | AT1G79630.3 | 37.267 | 161 | 81 | 5 | 304 | 445 | 89 | 248 | 9.15e-18 | 85.9 |
Msa1404290 | AT1G79630.4 | 37.267 | 161 | 81 | 5 | 304 | 445 | 89 | 248 | 9.15e-18 | 85.9 |
Msa1404290 | AT1G79630.5 | 37.267 | 161 | 81 | 5 | 304 | 445 | 89 | 248 | 9.15e-18 | 85.9 |
Msa1404290 | AT4G03415.1 | 27.953 | 254 | 136 | 8 | 234 | 445 | 83 | 331 | 1.46e-17 | 85.9 |
Msa1404290 | AT4G03415.3 | 27.953 | 254 | 136 | 8 | 234 | 445 | 83 | 331 | 1.46e-17 | 85.9 |
Msa1404290 | AT4G03415.2 | 27.953 | 254 | 136 | 8 | 234 | 445 | 83 | 331 | 1.46e-17 | 85.9 |
Msa1404290 | AT5G06750.3 | 28.736 | 261 | 128 | 7 | 232 | 448 | 62 | 308 | 2.39e-17 | 84.3 |
Msa1404290 | AT5G06750.1 | 28.736 | 261 | 128 | 7 | 232 | 448 | 62 | 308 | 2.39e-17 | 84.3 |
Msa1404290 | AT3G51370.1 | 28.571 | 231 | 129 | 6 | 249 | 447 | 75 | 301 | 2.54e-17 | 84.3 |
Msa1404290 | AT3G51370.3 | 28.571 | 231 | 129 | 6 | 249 | 447 | 75 | 301 | 2.54e-17 | 84.3 |
Msa1404290 | AT5G66080.1 | 29.362 | 235 | 122 | 7 | 249 | 447 | 78 | 304 | 9.23e-17 | 82.8 |
Msa1404290 | AT2G40860.3 | 30.131 | 229 | 124 | 10 | 208 | 427 | 394 | 595 | 2.54e-16 | 82.4 |
Msa1404290 | AT1G03590.1 | 28.205 | 234 | 129 | 6 | 251 | 445 | 88 | 321 | 4.70e-16 | 80.9 |
Msa1404290 | AT4G27800.3 | 25.503 | 298 | 152 | 9 | 207 | 465 | 60 | 326 | 1.00e-15 | 79.0 |
Msa1404290 | AT1G17545.1 | 34.965 | 143 | 44 | 5 | 229 | 364 | 78 | 178 | 1.47e-15 | 75.1 |
Msa1404290 | AT5G36250.1 | 29.317 | 249 | 123 | 11 | 253 | 448 | 98 | 346 | 6.95e-15 | 77.4 |
Msa1404290 | AT4G27800.2 | 25.000 | 292 | 149 | 9 | 207 | 459 | 60 | 320 | 9.53e-15 | 75.9 |
Msa1404290 | AT3G02750.2 | 35.000 | 160 | 85 | 6 | 305 | 445 | 193 | 352 | 9.61e-15 | 77.0 |
Msa1404290 | AT3G02750.1 | 35.000 | 160 | 85 | 6 | 305 | 445 | 193 | 352 | 9.61e-15 | 77.0 |
Msa1404290 | AT5G27930.3 | 31.429 | 210 | 115 | 8 | 253 | 433 | 92 | 301 | 4.69e-14 | 73.6 |
Msa1404290 | AT1G22280.2 | 32.275 | 189 | 90 | 9 | 207 | 390 | 34 | 189 | 2.37e-13 | 69.3 |
Msa1404290 | AT3G51370.2 | 32.298 | 161 | 75 | 5 | 321 | 447 | 56 | 216 | 9.97e-13 | 69.3 |
Msa1404290 | AT5G66080.2 | 30.909 | 165 | 76 | 5 | 319 | 447 | 38 | 200 | 7.31e-12 | 66.6 |
Msa1404290 | AT5G06750.2 | 31.447 | 159 | 74 | 4 | 325 | 448 | 68 | 226 | 7.36e-12 | 67.0 |
Msa1404290 | AT5G36250.2 | 27.757 | 263 | 123 | 12 | 253 | 448 | 98 | 360 | 8.69e-12 | 67.8 |
Msa1404290 | AT3G16560.3 | 25.200 | 250 | 122 | 9 | 253 | 442 | 175 | 419 | 9.96e-12 | 67.4 |
Msa1404290 | AT3G16560.1 | 25.200 | 250 | 122 | 9 | 253 | 442 | 175 | 419 | 1.10e-11 | 67.4 |
Msa1404290 | AT3G16560.4 | 25.200 | 250 | 122 | 9 | 253 | 442 | 175 | 419 | 1.10e-11 | 67.4 |
Msa1404290 | AT3G16560.2 | 25.200 | 250 | 122 | 9 | 253 | 442 | 175 | 419 | 1.10e-11 | 67.4 |
Find 134 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTAATTGTGATAGATTTAA+AGG | 0.171059 | tig0023052:-83905 | Msa1404290:CDS |
TGATGGGCATGGAGGCTTTC+AGG | 0.182963 | tig0023052:-85471 | Msa1404290:intron |
AATAAAAGGCTTAAGGAAAA+AGG | 0.199354 | tig0023052:-86341 | Msa1404290:five_prime_UTR |
ATCAAATTTCCAAGTGTAAA+TGG | 0.209870 | tig0023052:+86211 | None:intergenic |
ACCATATATCATAGAATAAA+AGG | 0.234400 | tig0023052:-86355 | Msa1404290:five_prime_UTR |
AGACTTAGGTTATTGCTAAA+AGG | 0.251804 | tig0023052:-86276 | Msa1404290:five_prime_UTR |
GTTAAAGACTAGAAGCTTAT+AGG | 0.257111 | tig0023052:-86306 | Msa1404290:five_prime_UTR |
GAAACAATTGGCAGGAAAAT+TGG | 0.260091 | tig0023052:-85281 | Msa1404290:CDS |
CAAGGAAGCGAATCCTTCTT+TGG | 0.267654 | tig0023052:-84059 | Msa1404290:CDS |
TCATTTATGCTATTGGTCTA+TGG | 0.275482 | tig0023052:-83828 | Msa1404290:three_prime_UTR |
AACCATCACTTGCTAAAATA+AGG | 0.282020 | tig0023052:+84121 | None:intergenic |
TGATTGAATGTGGGAGTAAT+TGG | 0.283028 | tig0023052:-85994 | Msa1404290:CDS |
AAATATCTCATTTATGCTAT+TGG | 0.288858 | tig0023052:-83835 | Msa1404290:three_prime_UTR |
TATGTGGGTTTGATTTAAAA+TGG | 0.290272 | tig0023052:+85170 | None:intergenic |
TTTCAGTGCCTGCATAATTC+AGG | 0.301475 | tig0023052:-85911 | Msa1404290:CDS |
CTTTGCACAATATTGACTTC+TGG | 0.302547 | tig0023052:+84162 | None:intergenic |
TACTCAATTCCAAACCATTC+TGG | 0.307215 | tig0023052:+85657 | None:intergenic |
AATTGAGTAGTGGCCCTCTA+TGG | 0.315879 | tig0023052:-85643 | Msa1404290:CDS |
CGTCCTTTATAGCCTGGTTA+TGG | 0.318628 | tig0023052:+85957 | None:intergenic |
CTTCTTTGGCACAAGAAGTA+TGG | 0.323327 | tig0023052:-84045 | Msa1404290:CDS |
TGAAGCTCGGCAGTCAAGTT+TGG | 0.330887 | tig0023052:-85319 | Msa1404290:CDS |
AGAAGAATAGCAGATAGTTT+TGG | 0.339478 | tig0023052:+85722 | None:intergenic |
TTTAGCAAGTGATGGTTTAT+GGG | 0.343067 | tig0023052:-84115 | Msa1404290:CDS |
TGGAAAGGATACAGAGTTCT+TGG | 0.348321 | tig0023052:-84920 | Msa1404290:CDS |
GATAACCGGGTTGAAGCTTA+TGG | 0.383742 | tig0023052:-86155 | Msa1404290:CDS |
CACATAATTGTTGCAAATTG+TGG | 0.384733 | tig0023052:-85153 | Msa1404290:CDS |
CACGGTATCCGCGGAGGTAA+AGG | 0.384992 | tig0023052:-86053 | Msa1404290:CDS |
TAGCATAAACGAGGTACTTC+CGG | 0.395663 | tig0023052:-85825 | Msa1404290:CDS |
CACAATTTGCAACAATTATG+TGG | 0.398808 | tig0023052:+85154 | None:intergenic |
ACAACTCATATGGAGATAAC+CGG | 0.401599 | tig0023052:-86169 | Msa1404290:CDS |
ATTGAGTAGTGGCCCTCTAT+GGG | 0.404588 | tig0023052:-85642 | Msa1404290:CDS |
ATCATAGAATAAAAGGCTTA+AGG | 0.405599 | tig0023052:-86348 | Msa1404290:five_prime_UTR |
ACTTGGAAATTTGATTCAAA+AGG | 0.416275 | tig0023052:-86203 | Msa1404290:CDS |
ACATAATTGTTGCAAATTGT+GGG | 0.422260 | tig0023052:-85152 | Msa1404290:CDS |
AAGCCATAACCAGGCTATAA+AGG | 0.423467 | tig0023052:-85960 | Msa1404290:CDS |
TTGATATTAAATCCTGCAGT+TGG | 0.427928 | tig0023052:-86115 | Msa1404290:CDS |
GCAGTGGAGCCAGCAGTCTC+AGG | 0.434389 | tig0023052:+85201 | None:intergenic |
TCACCAACCGTGACGATGAT+TGG | 0.437340 | tig0023052:+85866 | None:intergenic |
CGAGGTACTTCCGGCACTAA+AGG | 0.437574 | tig0023052:-85816 | Msa1404290:CDS |
CATATCTAGTTTCTTTGTTG+AGG | 0.438035 | tig0023052:-86941 | Msa1404290:five_prime_UTR |
CTTGAAGATATTTCTTCCAT+TGG | 0.442941 | tig0023052:+86244 | None:intergenic |
TTAAAGACTAGAAGCTTATA+GGG | 0.445492 | tig0023052:-86305 | Msa1404290:five_prime_UTR |
TTCTGCTCGGCCTTTAGTGC+CGG | 0.446492 | tig0023052:+85806 | None:intergenic |
TTATAGGGTACTAGAGACTT+AGG | 0.449944 | tig0023052:-86290 | Msa1404290:five_prime_UTR |
TGCTGCTGTTACAACTCATA+TGG | 0.453647 | tig0023052:-86179 | Msa1404290:CDS |
ATACAGAGTTCTTGGTGTCT+TGG | 0.453913 | tig0023052:-84912 | Msa1404290:CDS |
AACAAGCAACCAGAATGGTT+TGG | 0.455011 | tig0023052:-85666 | Msa1404290:CDS |
ACAATATTGACTTCTGGTTC+TGG | 0.455106 | tig0023052:+84168 | None:intergenic |
AGTCCCTTCACAGATGCTAA+TGG | 0.459379 | tig0023052:-85549 | Msa1404290:CDS |
TCTGGTTCTGGAATTATCCA+TGG | 0.460881 | tig0023052:+84180 | None:intergenic |
CTCGCCCTCCACAGAGGAAG+CGG | 0.461339 | tig0023052:-83940 | Msa1404290:CDS |
CATACTTCTTGTGCCAAAGA+AGG | 0.465903 | tig0023052:+84046 | None:intergenic |
TCAAGTTTGGATGAAGCAAA+TGG | 0.471498 | tig0023052:-85306 | Msa1404290:CDS |
AAGCAAATGGGAGAAACAAT+TGG | 0.477000 | tig0023052:-85293 | Msa1404290:CDS |
ATTATTATTATTATCTTCAA+AGG | 0.477647 | tig0023052:+86868 | None:intergenic |
TCTCATCGTCCTTTATAGCC+TGG | 0.499525 | tig0023052:+85951 | None:intergenic |
TTGGTGTCTTGGCCATGTCA+AGG | 0.499546 | tig0023052:-84901 | Msa1404290:CDS |
GCCCTCTCATCCTCTCGATT+CGG | 0.503961 | tig0023052:+84977 | None:intergenic |
TTGCAAATTGTGGGGATTCG+AGG | 0.505415 | tig0023052:-85143 | Msa1404290:CDS |
ACTAAAGGCCGAGCAGAATA+CGG | 0.508870 | tig0023052:-85801 | Msa1404290:CDS |
CTGTGGAAATAGACCGGAGA+TGG | 0.511631 | tig0023052:-85606 | Msa1404290:CDS |
AGTTGGTGCGTCTGTTGTCT+CGG | 0.520037 | tig0023052:-86023 | Msa1404290:CDS |
AAATCGAAGCGTGTCAGAAG+AGG | 0.522032 | tig0023052:-85750 | Msa1404290:CDS |
CAAGTTTGGATGAAGCAAAT+GGG | 0.522079 | tig0023052:-85305 | Msa1404290:CDS |
ACGGTTGGTGATGAGATTCA+TGG | 0.523608 | tig0023052:-85854 | Msa1404290:CDS |
GCAACAGCATCTTCCATCTC+CGG | 0.529449 | tig0023052:+85593 | None:intergenic |
ATCAATCTGTGGAAATAGAC+CGG | 0.533852 | tig0023052:-85612 | Msa1404290:CDS |
ACTATTGCTCCTGAGACTGC+TGG | 0.535769 | tig0023052:-85210 | Msa1404290:CDS |
TTTGGTGTCTATGATGGGCA+TGG | 0.536239 | tig0023052:-85482 | Msa1404290:CDS |
TCGAGGGCTGTCTTGTATCG+TGG | 0.542408 | tig0023052:-85126 | Msa1404290:CDS |
CGAGGGCTGTCTTGTATCGT+GGG | 0.543022 | tig0023052:-85125 | Msa1404290:CDS |
TTGGCCATGTCAAGGTCCAT+AGG | 0.543817 | tig0023052:-84893 | Msa1404290:intron |
TGCAAATTGTGGGGATTCGA+GGG | 0.545554 | tig0023052:-85142 | Msa1404290:CDS |
TTGAGAACAAGCAACCAGAA+TGG | 0.553751 | tig0023052:-85671 | Msa1404290:CDS |
AGGGCAAGAATCGAAGCAGC+AGG | 0.556886 | tig0023052:-84959 | Msa1404290:CDS |
TATAAAATTCTAAGTGTACA+AGG | 0.557288 | tig0023052:-83733 | Msa1404290:three_prime_UTR |
ACAATTTGCAACAATTATGT+GGG | 0.558102 | tig0023052:+85155 | None:intergenic |
ATTGAGAGCCTGAATTATGC+AGG | 0.559602 | tig0023052:+85903 | None:intergenic |
TCTTCTTGATCAGTTGCCAA+AGG | 0.560115 | tig0023052:-85705 | Msa1404290:CDS |
AAATGGGAGAAACAATTGGC+AGG | 0.562122 | tig0023052:-85289 | Msa1404290:CDS |
CATAATTGTTGCAAATTGTG+GGG | 0.563435 | tig0023052:-85151 | Msa1404290:CDS |
AAGAAGCATGTGATATTGCA+AGG | 0.565187 | tig0023052:-84077 | Msa1404290:CDS |
GACTGCTGGCTCCACTGCAG+TGG | 0.569359 | tig0023052:-85196 | Msa1404290:CDS |
GAATACGGTTTCTGTTGCAA+TGG | 0.570314 | tig0023052:-85786 | Msa1404290:CDS |
GTTGCAGTGCCATTTACACT+TGG | 0.572388 | tig0023052:-86220 | Msa1404290:CDS |
GAGGTAAAGGAGAATCAAGT+TGG | 0.572537 | tig0023052:-86040 | Msa1404290:CDS |
AACAGAAACCGTATTCTGCT+CGG | 0.575565 | tig0023052:+85793 | None:intergenic |
TCTACACTCAGCGTTGATTG+AGG | 0.579519 | tig0023052:-85346 | Msa1404290:CDS |
TTGATGAGAAACCCCATAGA+GGG | 0.580491 | tig0023052:+85630 | None:intergenic |
GCCGAATCGAGAGGATGAGA+GGG | 0.580620 | tig0023052:-84978 | Msa1404290:CDS |
CAGGAGGAAGAGTCATACAT+TGG | 0.580820 | tig0023052:-84940 | Msa1404290:CDS |
CTTGAGTGAAAGCCATAACC+AGG | 0.583606 | tig0023052:-85969 | Msa1404290:CDS |
ATCGCCGCTTCCTCTGTGGA+GGG | 0.585497 | tig0023052:+83936 | None:intergenic |
GTGAATGAATGAATGAATGA+AGG | 0.590232 | tig0023052:+86907 | None:intergenic |
ATTGATGAGAAACCCCATAG+AGG | 0.590904 | tig0023052:+85629 | None:intergenic |
GTGATAGATACTTGAAACCA+TGG | 0.595760 | tig0023052:-84197 | Msa1404290:CDS |
TAAAATGGCAACCACTGCAG+TGG | 0.596316 | tig0023052:+85185 | None:intergenic |
CATACCTATGGACCTTGACA+TGG | 0.597500 | tig0023052:+84889 | None:intergenic |
TCGGAAATGTTGATTGAATG+TGG | 0.599725 | tig0023052:-86004 | Msa1404290:CDS |
TATCGCCGCTTCCTCTGTGG+AGG | 0.600276 | tig0023052:+83935 | None:intergenic |
CGATGAGATCATGTTAGCTG+TGG | 0.601298 | tig0023052:-85936 | Msa1404290:CDS |
AGCCGAATCGAGAGGATGAG+AGG | 0.601648 | tig0023052:-84979 | Msa1404290:CDS |
TGTTATCGCCGCTTCCTCTG+TGG | 0.606503 | tig0023052:+83932 | None:intergenic |
CAACTCATATGGAGATAACC+GGG | 0.606916 | tig0023052:-86168 | Msa1404290:CDS |
GTGGTCAGAAGACAACGCTA+TGG | 0.607535 | tig0023052:+85095 | None:intergenic |
ACAGTACTTGACAAAGGAGA+AGG | 0.608657 | tig0023052:-84009 | Msa1404290:CDS |
TTGAGTAGTGGCCCTCTATG+GGG | 0.609354 | tig0023052:-85641 | Msa1404290:CDS |
TCATCCATTAGCATCTGTGA+AGG | 0.613517 | tig0023052:+85545 | None:intergenic |
TAAAAGGCAAAGTTAACCAA+TGG | 0.614252 | tig0023052:-86260 | Msa1404290:exon |
ATAATAATAATAATCAACTC+AGG | 0.614565 | tig0023052:-86847 | Msa1404290:intron |
TCACCAATCATCGTCACGGT+TGG | 0.616215 | tig0023052:-85869 | Msa1404290:CDS |
GGAAGAGTCATACATTGGAA+AGG | 0.617081 | tig0023052:-84935 | Msa1404290:CDS |
TGGGGTTTCTCATCAATCTG+TGG | 0.622774 | tig0023052:-85623 | Msa1404290:CDS |
CATCCATTAGCATCTGTGAA+GGG | 0.623872 | tig0023052:+85546 | None:intergenic |
TAATTCAGGCTCTCAATCTG+TGG | 0.624297 | tig0023052:-85897 | Msa1404290:CDS |
AATGGTTTGGAATTGAGTAG+TGG | 0.634780 | tig0023052:-85653 | Msa1404290:CDS |
CGGAAATGTTGATTGAATGT+GGG | 0.636981 | tig0023052:-86003 | Msa1404290:CDS |
GTACTTGACAAAGGAGAAGG+AGG | 0.638743 | tig0023052:-84006 | Msa1404290:CDS |
AATGAATGAATGAATGAAGG+AGG | 0.639567 | tig0023052:+86910 | None:intergenic |
GCAAGAATCGAAGCAGCAGG+AGG | 0.645246 | tig0023052:-84956 | Msa1404290:CDS |
GTTGAAGACTAACATCAGCA+TGG | 0.646810 | tig0023052:+86083 | None:intergenic |
TCAGATCACGGTATCCGCGG+AGG | 0.649352 | tig0023052:-86059 | Msa1404290:CDS |
TGATTGAGGAGATTGAAGCT+CGG | 0.650060 | tig0023052:-85332 | Msa1404290:CDS |
ATTTGCCATAAGCTTCAACC+CGG | 0.654249 | tig0023052:+86150 | None:intergenic |
CACAAGAAGTATGGTGACAA+CGG | 0.654302 | tig0023052:-84036 | Msa1404290:CDS |
ACATCAGATCACGGTATCCG+CGG | 0.656186 | tig0023052:-86062 | Msa1404290:CDS |
AGATTCACCAATCATCGTCA+CGG | 0.661305 | tig0023052:-85873 | Msa1404290:CDS |
TAGTCTTCAACATCAGATCA+CGG | 0.669945 | tig0023052:-86071 | Msa1404290:CDS |
TTGATTCTCCTTTACCTCCG+CGG | 0.675182 | tig0023052:+86045 | None:intergenic |
GGTGTCTATGATGGGCATGG+AGG | 0.675725 | tig0023052:-85479 | Msa1404290:CDS |
GGAGCAACAGTACTTGACAA+AGG | 0.702207 | tig0023052:-84015 | Msa1404290:CDS |
TCTAAACTCGCCCTCCACAG+AGG | 0.709645 | tig0023052:-83946 | Msa1404290:CDS |
TGGTAAGTTTAGCATAAACG+AGG | 0.709809 | tig0023052:-85834 | Msa1404290:CDS |
GAGTTTAGATAGATACTCTG+CGG | 0.743383 | tig0023052:+83960 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTATTATTATTATCTTCAA+AGG | + | tig0023052:83837-83856 | None:intergenic | 10.0% |
!! | TCAATTAAAAAAAAAATTAG+AGG | - | tig0023052:87028-87047 | Msa1404290:five_prime_UTR | 10.0% |
!! | TAAAAATAAACAATTCTTGA+AGG | - | tig0023052:83706-83725 | Msa1404290:three_prime_UTR | 15.0% |
!! | ATAATAATAATAATCAACTC+AGG | - | tig0023052:83855-83874 | Msa1404290:three_prime_UTR | 15.0% |
!! | ATAATATTATTTGCCTTAAA+GGG | - | tig0023052:83924-83943 | Msa1404290:CDS | 15.0% |
!!! | TTTTAAGTTTTAAGAAAGAA+AGG | - | tig0023052:86017-86036 | Msa1404290:CDS | 15.0% |
!! | CATAATATTATTTGCCTTAA+AGG | - | tig0023052:83923-83942 | Msa1404290:CDS | 20.0% |
!!! | CTGTGAATTTTGTTTATAAT+TGG | - | tig0023052:84074-84093 | Msa1404290:CDS | 20.0% |
!! | ACCATATATCATAGAATAAA+AGG | - | tig0023052:84347-84366 | Msa1404290:intron | 20.0% |
!!! | ATTTTGTGTTTTCATTCAAA+TGG | + | tig0023052:85183-85202 | None:intergenic | 20.0% |
!! | CAAATTGTATGATTTGATTA+AGG | + | tig0023052:85263-85282 | None:intergenic | 20.0% |
!!! | ACAATTGTTAGTTTATTGAT+AGG | - | tig0023052:86055-86074 | Msa1404290:CDS | 20.0% |
!! | AAAAATATTATAGTGCATCA+TGG | - | tig0023052:86305-86324 | Msa1404290:five_prime_UTR | 20.0% |
!! | TTAATCTCAATTACTGATAT+GGG | + | tig0023052:86459-86478 | None:intergenic | 20.0% |
!! | ATTAATCTCAATTACTGATA+TGG | + | tig0023052:86460-86479 | None:intergenic | 20.0% |
!! | TGTAATTGTGATAGATTTAA+AGG | - | tig0023052:86797-86816 | Msa1404290:intron | 20.0% |
!! | AAATATCTCATTTATGCTAT+TGG | - | tig0023052:86867-86886 | Msa1404290:five_prime_UTR | 20.0% |
!! | TATAAAATTCTAAGTGTACA+AGG | - | tig0023052:86969-86988 | Msa1404290:five_prime_UTR | 20.0% |
! | TGAAAGGAAACAAAATCAAT+AGG | + | tig0023052:83886-83905 | None:intergenic | 25.0% |
! | TTTCAACTATAAAGAGTGAA+AGG | + | tig0023052:83902-83921 | None:intergenic | 25.0% |
! | ATTCATCATGTTGATATGAA+AGG | - | tig0023052:83949-83968 | Msa1404290:CDS | 25.0% |
! | TTGATATGAAAGGAACAATT+TGG | - | tig0023052:83959-83978 | Msa1404290:CDS | 25.0% |
! | ATCAAGGATAAGAAATTTCA+TGG | - | tig0023052:83986-84005 | Msa1404290:CDS | 25.0% |
! | GATACAAAAAAAGAGAAGAA+CGG | + | tig0023052:84041-84060 | None:intergenic | 25.0% |
! | AACAAAATTCACAGAAAACA+AGG | + | tig0023052:84068-84087 | None:intergenic | 25.0% |
! | GTCTTTATGATGATTTCTAA+AGG | - | tig0023052:84162-84181 | Msa1404290:CDS | 25.0% |
!!! | TTTGATTTTGATGTACAAAG+AGG | - | tig0023052:84211-84230 | Msa1404290:intron | 25.0% |
!!! | ACACTTATTTGACTTTTAAG+AGG | - | tig0023052:84259-84278 | Msa1404290:intron | 25.0% |
!! | GCCTTTTATTCTATGATATA+TGG | + | tig0023052:84351-84370 | None:intergenic | 25.0% |
! | ATCATAGAATAAAAGGCTTA+AGG | - | tig0023052:84354-84373 | Msa1404290:intron | 25.0% |
! | AATAAAAGGCTTAAGGAAAA+AGG | - | tig0023052:84361-84380 | Msa1404290:intron | 25.0% |
! | ATAAAAGGCTTAAGGAAAAA+GGG | - | tig0023052:84362-84381 | Msa1404290:intron | 25.0% |
! | TTAAAGACTAGAAGCTTATA+GGG | - | tig0023052:84397-84416 | Msa1404290:intron | 25.0% |
! | ATCAAATTTCCAAGTGTAAA+TGG | + | tig0023052:84494-84513 | None:intergenic | 25.0% |
! | ACTTGGAAATTTGATTCAAA+AGG | - | tig0023052:84499-84518 | Msa1404290:intron | 25.0% |
!!! | ATTTTTTTGGTGTCTATGAT+GGG | - | tig0023052:85215-85234 | Msa1404290:CDS | 25.0% |
!! | TATGTGGGTTTGATTTAAAA+TGG | + | tig0023052:85535-85554 | None:intergenic | 25.0% |
! | ACAATTTGCAACAATTATGT+GGG | + | tig0023052:85550-85569 | None:intergenic | 25.0% |
! | ACATAATTGTTGCAAATTGT+GGG | - | tig0023052:85550-85569 | Msa1404290:CDS | 25.0% |
! | TCTATTCAGTTTGGTATTAA+GGG | - | tig0023052:85892-85911 | Msa1404290:CDS | 25.0% |
!! | TTCTTTTAATCAGTATCTCA+AGG | - | tig0023052:86092-86111 | Msa1404290:CDS | 25.0% |
!! | TTTTTCTGTTCCAAAGTTAT+GGG | + | tig0023052:86119-86138 | None:intergenic | 25.0% |
! | AAAGAATATATCCTATCCAA+AGG | + | tig0023052:86175-86194 | None:intergenic | 25.0% |
! | AGTTTCCTTTATTCAGAAAA+TGG | - | tig0023052:86330-86349 | Msa1404290:five_prime_UTR | 25.0% |
!!! | TTAAGCCATTTTCTGAATAA+AGG | + | tig0023052:86338-86357 | None:intergenic | 25.0% |
! | AACAAGTTTATGATATCCAA+AGG | + | tig0023052:86386-86405 | None:intergenic | 25.0% |
! | TAATCTCAATTACTGATATG+GGG | + | tig0023052:86458-86477 | None:intergenic | 25.0% |
! | CATATCTAGTTTCTTTGTTG+AGG | - | tig0023052:83761-83780 | Msa1404290:three_prime_UTR | 30.0% |
AATGAATGAATGAATGAAGG+AGG | + | tig0023052:83795-83814 | None:intergenic | 30.0% | |
GTGAATGAATGAATGAATGA+AGG | + | tig0023052:83798-83817 | None:intergenic | 30.0% | |
TCTAAAGGATCTTGTATTGT+AGG | - | tig0023052:84177-84196 | Msa1404290:CDS | 30.0% | |
AAACATCAAGAATTCTCCTA+CGG | + | tig0023052:84313-84332 | None:intergenic | 30.0% | |
GTTAAAGACTAGAAGCTTAT+AGG | - | tig0023052:84396-84415 | Msa1404290:intron | 30.0% | |
AGACTTAGGTTATTGCTAAA+AGG | - | tig0023052:84426-84445 | Msa1404290:intron | 30.0% | |
TAAAAGGCAAAGTTAACCAA+TGG | - | tig0023052:84442-84461 | Msa1404290:intron | 30.0% | |
CTTGAAGATATTTCTTCCAT+TGG | + | tig0023052:84461-84480 | None:intergenic | 30.0% | |
TTGATATTAAATCCTGCAGT+TGG | - | tig0023052:84587-84606 | Msa1404290:intron | 30.0% | |
! | AGAAGAATAGCAGATAGTTT+TGG | + | tig0023052:84983-85002 | None:intergenic | 30.0% |
!!! | TATCCACAAGTCCATTTTTT+TGG | - | tig0023052:85202-85221 | Msa1404290:CDS | 30.0% |
CATCATAGACACCAAAAAAA+TGG | + | tig0023052:85216-85235 | None:intergenic | 30.0% | |
!!! | CATTTTTTTGGTGTCTATGA+TGG | - | tig0023052:85214-85233 | Msa1404290:CDS | 30.0% |
CACAATTTGCAACAATTATG+TGG | + | tig0023052:85551-85570 | None:intergenic | 30.0% | |
CACATAATTGTTGCAAATTG+TGG | - | tig0023052:85549-85568 | Msa1404290:CDS | 30.0% | |
CATAATTGTTGCAAATTGTG+GGG | - | tig0023052:85551-85570 | Msa1404290:CDS | 30.0% | |
CTCTATTCAGTTTGGTATTA+AGG | - | tig0023052:85891-85910 | Msa1404290:CDS | 30.0% | |
CTATTCAGTTTGGTATTAAG+GGG | - | tig0023052:85893-85912 | Msa1404290:CDS | 30.0% | |
!!! | TCAAACGTTTTTTGCTGAAT+AGG | - | tig0023052:85939-85958 | Msa1404290:CDS | 30.0% |
!!! | CAAACGTTTTTTGCTGAATA+GGG | - | tig0023052:85940-85959 | Msa1404290:CDS | 30.0% |
AGTTTATTGATAGGAATTCG+TGG | - | tig0023052:86064-86083 | Msa1404290:CDS | 30.0% | |
! | CTTTTTCTGTTCCAAAGTTA+TGG | + | tig0023052:86120-86139 | None:intergenic | 30.0% |
!! | TGCAGTTTTTAACTCAAACA+AGG | + | tig0023052:86426-86445 | None:intergenic | 30.0% |
! | TCTTATTGTCTTGTTCAAAC+AGG | - | tig0023052:86483-86502 | Msa1404290:intron | 30.0% |
! | AACCATCACTTGCTAAAATA+AGG | + | tig0023052:86584-86603 | None:intergenic | 30.0% |
! | TTTTAGCAAGTGATGGTTTA+TGG | - | tig0023052:86586-86605 | Msa1404290:intron | 30.0% |
TTTAGCAAGTGATGGTTTAT+GGG | - | tig0023052:86587-86606 | Msa1404290:intron | 30.0% | |
! | TCATTTATGCTATTGGTCTA+TGG | - | tig0023052:86874-86893 | Msa1404290:five_prime_UTR | 30.0% |
! | ATTGAAACTTTTGTGATGCT+TGG | + | tig0023052:87013-87032 | None:intergenic | 30.0% |
ACATGATGAATCACCCTTTA+AGG | + | tig0023052:83940-83959 | None:intergenic | 35.0% | |
GGAACAATTTGGTCAAATCA+AGG | - | tig0023052:83970-83989 | Msa1404290:CDS | 35.0% | |
AGGATAAGAAATTTCATGGC+CGG | - | tig0023052:83990-84009 | Msa1404290:CDS | 35.0% | |
AACCTTCTAGCAGATAAATC+AGG | + | tig0023052:84126-84145 | None:intergenic | 35.0% | |
CCTACGGCAAGAAATTTAAA+GGG | + | tig0023052:84297-84316 | None:intergenic | 35.0% | |
TCCTACGGCAAGAAATTTAA+AGG | + | tig0023052:84298-84317 | None:intergenic | 35.0% | |
AGGAAAAAGGGAGAAAAAAG+TGG | - | tig0023052:84374-84393 | Msa1404290:intron | 35.0% | |
! | TTATAGGGTACTAGAGACTT+AGG | - | tig0023052:84412-84431 | Msa1404290:intron | 35.0% |
ACAACTCATATGGAGATAAC+CGG | - | tig0023052:84533-84552 | Msa1404290:intron | 35.0% | |
TAGTCTTCAACATCAGATCA+CGG | - | tig0023052:84631-84650 | Msa1404290:intron | 35.0% | |
! | TCGGAAATGTTGATTGAATG+TGG | - | tig0023052:84698-84717 | Msa1404290:intron | 35.0% |
! | CGGAAATGTTGATTGAATGT+GGG | - | tig0023052:84699-84718 | Msa1404290:intron | 35.0% |
TGATTGAATGTGGGAGTAAT+TGG | - | tig0023052:84708-84727 | Msa1404290:intron | 35.0% | |
TGGTAAGTTTAGCATAAACG+AGG | - | tig0023052:84868-84887 | Msa1404290:intron | 35.0% | |
!! | CTCAATGTTTTGTTCTCCTT+TGG | + | tig0023052:85016-85035 | None:intergenic | 35.0% |
TACTCAATTCCAAACCATTC+TGG | + | tig0023052:85048-85067 | None:intergenic | 35.0% | |
! | AATGGTTTGGAATTGAGTAG+TGG | - | tig0023052:85049-85068 | Msa1404290:intron | 35.0% |
ATCAATCTGTGGAAATAGAC+CGG | - | tig0023052:85090-85109 | Msa1404290:intron | 35.0% | |
! | ACACCAAAAAAATGGACTTG+TGG | + | tig0023052:85208-85227 | None:intergenic | 35.0% |
!!! | GAGAGTGTTTTGTTTCTGAT+AGG | - | tig0023052:85311-85330 | Msa1404290:CDS | 35.0% |
TCAAGTTTGGATGAAGCAAA+TGG | - | tig0023052:85396-85415 | Msa1404290:intron | 35.0% | |
CAAGTTTGGATGAAGCAAAT+GGG | - | tig0023052:85397-85416 | Msa1404290:intron | 35.0% | |
AAGCAAATGGGAGAAACAAT+TGG | - | tig0023052:85409-85428 | Msa1404290:intron | 35.0% | |
GAAACAATTGGCAGGAAAAT+TGG | - | tig0023052:85421-85440 | Msa1404290:intron | 35.0% | |
CTATGAAATGCCTTACTTTG+TGG | + | tig0023052:85629-85648 | None:intergenic | 35.0% | |
ATGCAACAGATACATACCTA+TGG | + | tig0023052:85828-85847 | None:intergenic | 35.0% | |
GTATGTATCTGTTGCATGAT+TGG | - | tig0023052:85831-85850 | Msa1404290:CDS | 35.0% | |
GCATGTTACTCTATTCAGTT+TGG | - | tig0023052:85883-85902 | Msa1404290:CDS | 35.0% | |
AAAGGCTGAAATCACATTCA+AGG | + | tig0023052:86157-86176 | None:intergenic | 35.0% | |
TTGAATGTGATTTCAGCCTT+TGG | - | tig0023052:86156-86175 | Msa1404290:CDS | 35.0% | |
AAAGGCTGAAATCACATTCA+AGG | + | tig0023052:86157-86176 | None:intergenic | 35.0% | |
TTGAATGTGATTTCAGCCTT+TGG | - | tig0023052:86156-86175 | Msa1404290:CDS | 35.0% | |
GTGATAGATACTTGAAACCA+TGG | - | tig0023052:86505-86524 | Msa1404290:intron | 35.0% | |
!! | ACAATATTGACTTCTGGTTC+TGG | + | tig0023052:86537-86556 | None:intergenic | 35.0% |
!! | CTTTGCACAATATTGACTTC+TGG | + | tig0023052:86543-86562 | None:intergenic | 35.0% |
!!! | TGCCTTATTTTAGCAAGTGA+TGG | - | tig0023052:86579-86598 | Msa1404290:intron | 35.0% |
! | AAGAAGCATGTGATATTGCA+AGG | - | tig0023052:86625-86644 | Msa1404290:intron | 35.0% |
GAGTTTAGATAGATACTCTG+CGG | + | tig0023052:86745-86764 | None:intergenic | 35.0% | |
AGCCCTTTGTGAAAAATTGA+GGG | + | tig0023052:86932-86951 | None:intergenic | 35.0% | |
TAGCCCTTTGTGAAAAATTG+AGG | + | tig0023052:86933-86952 | None:intergenic | 35.0% | |
! | AACTTTTGTGATGCTTGGAA+AGG | + | tig0023052:87008-87027 | None:intergenic | 35.0% |
CAAAGGATGAAAAACAGTGC+AGG | + | tig0023052:83820-83839 | None:intergenic | 40.0% | |
! | TGTGACTTGTCTCAGATCTA+GGG | - | tig0023052:84013-84032 | Msa1404290:CDS | 40.0% |
TGCCTGATTTATCTGCTAGA+AGG | - | tig0023052:84121-84140 | Msa1404290:CDS | 40.0% | |
CCCTTTAAATTTCTTGCCGT+AGG | - | tig0023052:84294-84313 | Msa1404290:intron | 40.0% | |
TGCTGCTGTTACAACTCATA+TGG | - | tig0023052:84523-84542 | Msa1404290:intron | 40.0% | |
CAACTCATATGGAGATAACC+GGG | - | tig0023052:84534-84553 | Msa1404290:intron | 40.0% | |
ATTTGCCATAAGCTTCAACC+CGG | + | tig0023052:84555-84574 | None:intergenic | 40.0% | |
! | TGGTTTTCATTTCCAACTGC+AGG | + | tig0023052:84602-84621 | None:intergenic | 40.0% |
GTTGAAGACTAACATCAGCA+TGG | + | tig0023052:84622-84641 | None:intergenic | 40.0% | |
GAGGTAAAGGAGAATCAAGT+TGG | - | tig0023052:84662-84681 | Msa1404290:intron | 40.0% | |
AAGCCATAACCAGGCTATAA+AGG | - | tig0023052:84742-84761 | Msa1404290:intron | 40.0% | |
TTTCAGTGCCTGCATAATTC+AGG | - | tig0023052:84791-84810 | Msa1404290:intron | 40.0% | |
ATTGAGAGCCTGAATTATGC+AGG | + | tig0023052:84802-84821 | None:intergenic | 40.0% | |
TAATTCAGGCTCTCAATCTG+TGG | - | tig0023052:84805-84824 | Msa1404290:intron | 40.0% | |
AGATTCACCAATCATCGTCA+CGG | - | tig0023052:84829-84848 | Msa1404290:intron | 40.0% | |
! | TAGCATAAACGAGGTACTTC+CGG | - | tig0023052:84877-84896 | Msa1404290:intron | 40.0% |
AACAGAAACCGTATTCTGCT+CGG | + | tig0023052:84912-84931 | None:intergenic | 40.0% | |
GAATACGGTTTCTGTTGCAA+TGG | - | tig0023052:84916-84935 | Msa1404290:CDS | 40.0% | |
TCTTCTTGATCAGTTGCCAA+AGG | - | tig0023052:84997-85016 | Msa1404290:intron | 40.0% | |
TTGAGAACAAGCAACCAGAA+TGG | - | tig0023052:85031-85050 | Msa1404290:intron | 40.0% | |
AACAAGCAACCAGAATGGTT+TGG | - | tig0023052:85036-85055 | Msa1404290:intron | 40.0% | |
TTGATGAGAAACCCCATAGA+GGG | + | tig0023052:85075-85094 | None:intergenic | 40.0% | |
ATTGATGAGAAACCCCATAG+AGG | + | tig0023052:85076-85095 | None:intergenic | 40.0% | |
CATCCATTAGCATCTGTGAA+GGG | + | tig0023052:85159-85178 | None:intergenic | 40.0% | |
TCATCCATTAGCATCTGTGA+AGG | + | tig0023052:85160-85179 | None:intergenic | 40.0% | |
TGATTGAGGAGATTGAAGCT+CGG | - | tig0023052:85370-85389 | Msa1404290:CDS | 40.0% | |
AAATGGGAGAAACAATTGGC+AGG | - | tig0023052:85413-85432 | Msa1404290:intron | 40.0% | |
TGTCTTCTGACCACAAAGTA+AGG | - | tig0023052:85616-85635 | Msa1404290:CDS | 40.0% | |
ATTATGTCAGACGCTGAAGT+TGG | - | tig0023052:85670-85689 | Msa1404290:CDS | 40.0% | |
GGAAGAGTCATACATTGGAA+AGG | - | tig0023052:85767-85786 | Msa1404290:CDS | 40.0% | |
TGGAAAGGATACAGAGTTCT+TGG | - | tig0023052:85782-85801 | Msa1404290:CDS | 40.0% | |
!! | ATACAGAGTTCTTGGTGTCT+TGG | - | tig0023052:85790-85809 | Msa1404290:CDS | 40.0% |
! | TTTTTGCTGAATAGGGACAC+AGG | - | tig0023052:85947-85966 | Msa1404290:CDS | 40.0% |
ATCTCAAGGACCCATAACTT+TGG | - | tig0023052:86106-86125 | Msa1404290:CDS | 40.0% | |
TGTGATTTCAGCCTTTGGAT+AGG | - | tig0023052:86161-86180 | Msa1404290:CDS | 40.0% | |
!! | TCTGGTTCTGGAATTATCCA+TGG | + | tig0023052:86525-86544 | None:intergenic | 40.0% |
CATACTTCTTGTGCCAAAGA+AGG | + | tig0023052:86659-86678 | None:intergenic | 40.0% | |
CTTCTTTGGCACAAGAAGTA+TGG | - | tig0023052:86657-86676 | Msa1404290:intron | 40.0% | |
! | CACAAGAAGTATGGTGACAA+CGG | - | tig0023052:86666-86685 | Msa1404290:intron | 40.0% |
ACAGTACTTGACAAAGGAGA+AGG | - | tig0023052:86693-86712 | Msa1404290:intron | 40.0% | |
! | AGCCCCTCAATTTTTCACAA+AGG | - | tig0023052:86926-86945 | Msa1404290:five_prime_UTR | 40.0% |
! | GCCCCTCAATTTTTCACAAA+GGG | - | tig0023052:86927-86946 | Msa1404290:five_prime_UTR | 40.0% |
GCCCTTTGTGAAAAATTGAG+GGG | + | tig0023052:86931-86950 | None:intergenic | 40.0% | |
! | AGATCTGAGACAAGTCACAC+CGG | + | tig0023052:84012-84031 | None:intergenic | 45.0% |
! | GTGTGACTTGTCTCAGATCT+AGG | - | tig0023052:84012-84031 | Msa1404290:CDS | 45.0% |
!! | GTTGCAGTGCCATTTACACT+TGG | - | tig0023052:84482-84501 | Msa1404290:intron | 45.0% |
! | GATAACCGGGTTGAAGCTTA+TGG | - | tig0023052:84547-84566 | Msa1404290:intron | 45.0% |
TTGATTCTCCTTTACCTCCG+CGG | + | tig0023052:84660-84679 | None:intergenic | 45.0% | |
CTTGAGTGAAAGCCATAACC+AGG | - | tig0023052:84733-84752 | Msa1404290:intron | 45.0% | |
CGTCCTTTATAGCCTGGTTA+TGG | + | tig0023052:84748-84767 | None:intergenic | 45.0% | |
TCTCATCGTCCTTTATAGCC+TGG | + | tig0023052:84754-84773 | None:intergenic | 45.0% | |
CGATGAGATCATGTTAGCTG+TGG | - | tig0023052:84766-84785 | Msa1404290:intron | 45.0% | |
!! | ACGGTTGGTGATGAGATTCA+TGG | - | tig0023052:84848-84867 | Msa1404290:intron | 45.0% |
ACTAAAGGCCGAGCAGAATA+CGG | - | tig0023052:84901-84920 | Msa1404290:CDS | 45.0% | |
AAATCGAAGCGTGTCAGAAG+AGG | - | tig0023052:84952-84971 | Msa1404290:CDS | 45.0% | |
AATTGAGTAGTGGCCCTCTA+TGG | - | tig0023052:85059-85078 | Msa1404290:intron | 45.0% | |
ATTGAGTAGTGGCCCTCTAT+GGG | - | tig0023052:85060-85079 | Msa1404290:intron | 45.0% | |
TGGGGTTTCTCATCAATCTG+TGG | - | tig0023052:85079-85098 | Msa1404290:intron | 45.0% | |
GAAGGGACTTGAAAAAGCTG+AGG | + | tig0023052:85142-85161 | None:intergenic | 45.0% | |
AGTCCCTTCACAGATGCTAA+TGG | - | tig0023052:85153-85172 | Msa1404290:CDS | 45.0% | |
!! | TTTGGTGTCTATGATGGGCA+TGG | - | tig0023052:85220-85239 | Msa1404290:CDS | 45.0% |
!! | TCTACACTCAGCGTTGATTG+AGG | - | tig0023052:85356-85375 | Msa1404290:CDS | 45.0% |
TAAAATGGCAACCACTGCAG+TGG | + | tig0023052:85520-85539 | None:intergenic | 45.0% | |
TTGCAAATTGTGGGGATTCG+AGG | - | tig0023052:85559-85578 | Msa1404290:CDS | 45.0% | |
TGCAAATTGTGGGGATTCGA+GGG | - | tig0023052:85560-85579 | Msa1404290:CDS | 45.0% | |
CAGGAGGAAGAGTCATACAT+TGG | - | tig0023052:85762-85781 | Msa1404290:CDS | 45.0% | |
CATACCTATGGACCTTGACA+TGG | + | tig0023052:85816-85835 | None:intergenic | 45.0% | |
CAAGGAAGCGAATCCTTCTT+TGG | - | tig0023052:86643-86662 | Msa1404290:intron | 45.0% | |
GGAGCAACAGTACTTGACAA+AGG | - | tig0023052:86687-86706 | Msa1404290:intron | 45.0% | |
GTACTTGACAAAGGAGAAGG+AGG | - | tig0023052:86696-86715 | Msa1404290:intron | 45.0% | |
ACATCAGATCACGGTATCCG+CGG | - | tig0023052:84640-84659 | Msa1404290:intron | 50.0% | |
! | AGTTGGTGCGTCTGTTGTCT+CGG | - | tig0023052:84679-84698 | Msa1404290:intron | 50.0% |
TCACCAATCATCGTCACGGT+TGG | - | tig0023052:84833-84852 | Msa1404290:intron | 50.0% | |
TCACCAACCGTGACGATGAT+TGG | + | tig0023052:84839-84858 | None:intergenic | 50.0% | |
TTGAGTAGTGGCCCTCTATG+GGG | - | tig0023052:85061-85080 | Msa1404290:intron | 50.0% | |
CTGTGGAAATAGACCGGAGA+TGG | - | tig0023052:85096-85115 | Msa1404290:CDS | 50.0% | |
GCAACAGCATCTTCCATCTC+CGG | + | tig0023052:85112-85131 | None:intergenic | 50.0% | |
TGAAGCTCGGCAGTCAAGTT+TGG | - | tig0023052:85383-85402 | Msa1404290:intron | 50.0% | |
ACTATTGCTCCTGAGACTGC+TGG | - | tig0023052:85492-85511 | Msa1404290:CDS | 50.0% | |
GTGGTCAGAAGACAACGCTA+TGG | + | tig0023052:85610-85629 | None:intergenic | 50.0% | |
! | ACTTTTGCAGCCGAATCGAG+AGG | - | tig0023052:85715-85734 | Msa1404290:CDS | 50.0% |
! | TTGGTGTCTTGGCCATGTCA+AGG | - | tig0023052:85801-85820 | Msa1404290:CDS | 50.0% |
TTGGCCATGTCAAGGTCCAT+AGG | - | tig0023052:85809-85828 | Msa1404290:CDS | 50.0% | |
! | CGAGGTACTTCCGGCACTAA+AGG | - | tig0023052:84886-84905 | Msa1404290:intron | 55.0% |
TTCTGCTCGGCCTTTAGTGC+CGG | + | tig0023052:84899-84918 | None:intergenic | 55.0% | |
!! | GGTGTCTATGATGGGCATGG+AGG | - | tig0023052:85223-85242 | Msa1404290:CDS | 55.0% |
! | TGATGGGCATGGAGGCTTTC+AGG | - | tig0023052:85231-85250 | Msa1404290:CDS | 55.0% |
TCGAGGGCTGTCTTGTATCG+TGG | - | tig0023052:85576-85595 | Msa1404290:CDS | 55.0% | |
CGAGGGCTGTCTTGTATCGT+GGG | - | tig0023052:85577-85596 | Msa1404290:CDS | 55.0% | |
AGCCGAATCGAGAGGATGAG+AGG | - | tig0023052:85723-85742 | Msa1404290:CDS | 55.0% | |
GCCGAATCGAGAGGATGAGA+GGG | - | tig0023052:85724-85743 | Msa1404290:CDS | 55.0% | |
GCCCTCTCATCCTCTCGATT+CGG | + | tig0023052:85728-85747 | None:intergenic | 55.0% | |
AGGGCAAGAATCGAAGCAGC+AGG | - | tig0023052:85743-85762 | Msa1404290:CDS | 55.0% | |
GCAAGAATCGAAGCAGCAGG+AGG | - | tig0023052:85746-85765 | Msa1404290:CDS | 55.0% | |
TCTAAACTCGCCCTCCACAG+AGG | - | tig0023052:86756-86775 | Msa1404290:intron | 55.0% | |
TGTTATCGCCGCTTCCTCTG+TGG | + | tig0023052:86773-86792 | None:intergenic | 55.0% | |
TCAGATCACGGTATCCGCGG+AGG | - | tig0023052:84643-84662 | Msa1404290:intron | 60.0% | |
CACGGTATCCGCGGAGGTAA+AGG | - | tig0023052:84649-84668 | Msa1404290:intron | 60.0% | |
ATCGCCGCTTCCTCTGTGGA+GGG | + | tig0023052:86769-86788 | None:intergenic | 60.0% | |
TATCGCCGCTTCCTCTGTGG+AGG | + | tig0023052:86770-86789 | None:intergenic | 60.0% | |
GCAGTGGAGCCAGCAGTCTC+AGG | + | tig0023052:85504-85523 | None:intergenic | 65.0% | |
!! | GACTGCTGGCTCCACTGCAG+TGG | - | tig0023052:85506-85525 | Msa1404290:CDS | 65.0% |
CTCGCCCTCCACAGAGGAAG+CGG | - | tig0023052:86762-86781 | Msa1404290:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0023052 | gene | 83673 | 87051 | 83673 | ID=Msa1404290;Name=Msa1404290 |
tig0023052 | mRNA | 83673 | 87051 | 83673 | ID=Msa1404290-mRNA-1;Parent=Msa1404290;Name=Msa1404290-mRNA-1;_AED=0.03;_eAED=0.03;_QI=349|1|1|1|0.75|0.6|5|203|513 |
tig0023052 | exon | 83673 | 84219 | 83673 | ID=Msa1404290-mRNA-1:exon:19702;Parent=Msa1404290-mRNA-1 |
tig0023052 | exon | 84894 | 84999 | 84894 | ID=Msa1404290-mRNA-1:exon:19701;Parent=Msa1404290-mRNA-1 |
tig0023052 | exon | 85092 | 85391 | 85092 | ID=Msa1404290-mRNA-1:exon:19700;Parent=Msa1404290-mRNA-1 |
tig0023052 | exon | 85472 | 86408 | 85472 | ID=Msa1404290-mRNA-1:exon:19699;Parent=Msa1404290-mRNA-1 |
tig0023052 | exon | 86848 | 87051 | 86848 | ID=Msa1404290-mRNA-1:exon:19698;Parent=Msa1404290-mRNA-1 |
tig0023052 | five_prime_UTR | 86848 | 87051 | 86848 | ID=Msa1404290-mRNA-1:five_prime_utr;Parent=Msa1404290-mRNA-1 |
tig0023052 | five_prime_UTR | 86264 | 86408 | 86264 | ID=Msa1404290-mRNA-1:five_prime_utr;Parent=Msa1404290-mRNA-1 |
tig0023052 | CDS | 85472 | 86263 | 85472 | ID=Msa1404290-mRNA-1:cds;Parent=Msa1404290-mRNA-1 |
tig0023052 | CDS | 85092 | 85391 | 85092 | ID=Msa1404290-mRNA-1:cds;Parent=Msa1404290-mRNA-1 |
tig0023052 | CDS | 84894 | 84999 | 84894 | ID=Msa1404290-mRNA-1:cds;Parent=Msa1404290-mRNA-1 |
tig0023052 | CDS | 83876 | 84219 | 83876 | ID=Msa1404290-mRNA-1:cds;Parent=Msa1404290-mRNA-1 |
tig0023052 | three_prime_UTR | 83673 | 83875 | 83673 | ID=Msa1404290-mRNA-1:three_prime_utr;Parent=Msa1404290-mRNA-1 |
Gene Sequence |
Protein sequence |