Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0235720 | XP_013462597.1 | 91.283 | 608 | 53 | 0 | 1 | 608 | 1 | 608 | 0.0 | 1068 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0235720 | A0A072V461 | 91.283 | 608 | 53 | 0 | 1 | 608 | 1 | 608 | 0.0 | 1068 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0091930 | Msa0235720 | 0.802642 | 5.093095e-49 | -8.615850e-47 |
| Msa0193860 | Msa0235720 | 0.918683 | 1.150968e-86 | -8.615850e-47 |
| Msa0235720 | Msa0314180 | 0.942589 | 5.499004e-102 | -8.615850e-47 |
| Msa0235720 | Msa0574570 | 0.824902 | 6.275734e-54 | -8.615850e-47 |
| Msa0235720 | Msa0574580 | 0.801625 | 8.242158e-49 | -8.615850e-47 |
| Msa0235720 | Msa0708290 | 0.821561 | 3.781024e-53 | -8.615850e-47 |
| Msa0235720 | Msa0708300 | 0.822994 | 1.758372e-53 | -8.615850e-47 |
| Msa0235720 | Msa0780350 | 0.806334 | 8.653285e-50 | -8.615850e-47 |
| Msa0235720 | Msa0834030 | 0.809554 | 1.786386e-50 | -8.615850e-47 |
| Msa0235720 | Msa1353870 | 0.819145 | 1.354074e-52 | -8.615850e-47 |
| Msa0235720 | Msa1353880 | 0.815081 | 1.109742e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0235720 | MtrunA17_Chr2g0284221 | 91.283 | 608 | 53 | 0 | 1 | 608 | 1 | 608 | 0.0 | 1068 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 121 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATCCGTTCTCTAATAATT+TGG | 0.097174 | 2_2:-8584010 | Msa0235720:CDS |
| CCATTCATATCTGGATAATT+AGG | 0.169812 | 2_2:-8581774 | Msa0235720:three_prime_UTR |
| ACATATTATCAACTAATTAT+TGG | 0.184086 | 2_2:-8582003 | Msa0235720:three_prime_UTR |
| ACCAACTTCATTGCCGTTCT+TGG | 0.193830 | 2_2:+8582837 | None:intergenic |
| TTATCTTGATAGATCATTAA+AGG | 0.205521 | 2_2:-8583143 | Msa0235720:CDS |
| CTGAAGCAGAACGTTGTTAT+AGG | 0.249987 | 2_2:-8582634 | Msa0235720:CDS |
| TTGAAGTTGATGTGCTTAAT+TGG | 0.250060 | 2_2:-8585860 | Msa0235720:CDS |
| CCACAGTTCTTTCCTGGTAT+TGG | 0.271242 | 2_2:-8583844 | Msa0235720:CDS |
| GAATCAAGCAAAGAACTAAA+AGG | 0.274738 | 2_2:+8586026 | None:intergenic |
| TAAAACTTATCATTGGCTTA+TGG | 0.286687 | 2_2:-8582606 | Msa0235720:CDS |
| ACATCTTCAACAATTGTAAA+AGG | 0.290927 | 2_2:-8586193 | Msa0235720:five_prime_UTR |
| GTTGATCTTCCATTCATATC+TGG | 0.297846 | 2_2:-8581783 | Msa0235720:three_prime_UTR |
| TCAGATTATTGATTATTTGC+AGG | 0.331084 | 2_2:+8583242 | None:intergenic |
| AATCCGTTCTCTAATAATTT+GGG | 0.332628 | 2_2:-8584009 | Msa0235720:CDS |
| TATCTGCAAAATGGTAATAC+TGG | 0.337162 | 2_2:-8582931 | Msa0235720:CDS |
| CGAGCTCCACAGTTCTTTCC+TGG | 0.337750 | 2_2:-8583850 | Msa0235720:CDS |
| TCAGAATTGGAAGAGGGTTT+TGG | 0.340517 | 2_2:+8586062 | None:intergenic |
| AGATAGAGCTGGTTTGGATT+TGG | 0.341628 | 2_2:+8582949 | None:intergenic |
| GTCATCATGATTGTCAGAAT+TGG | 0.349089 | 2_2:+8586049 | None:intergenic |
| ATTACCTTAACGTCAGGTTT+TGG | 0.356212 | 2_2:+8583361 | None:intergenic |
| AACCAGCTCTATCTGCAAAA+TGG | 0.360107 | 2_2:-8582940 | Msa0235720:CDS |
| GGATCCACAGAGATGCTTCT+TGG | 0.363335 | 2_2:+8583637 | None:intergenic |
| ACCCAGAGGAATTGTTGTTT+TGG | 0.364863 | 2_2:-8582673 | Msa0235720:CDS |
| TCCTGGTATTGGATATGTTA+AGG | 0.376374 | 2_2:-8583833 | Msa0235720:CDS |
| GTTGGAGAACGACCCTTTGC+AGG | 0.376951 | 2_2:+8583469 | None:intergenic |
| AACAACAAATTAGTAGTTAC+AGG | 0.378198 | 2_2:+8583781 | None:intergenic |
| GGAAATTTAAAACTTATCAT+TGG | 0.389447 | 2_2:-8582613 | Msa0235720:CDS |
| GCTATAGTTTCTAATGTGAT+TGG | 0.393230 | 2_2:-8582904 | Msa0235720:CDS |
| TTCCAAAACAACAATTCCTC+TGG | 0.407386 | 2_2:+8582671 | None:intergenic |
| CTGATGTGGATTCTCCTTGT+TGG | 0.416929 | 2_2:-8583975 | Msa0235720:CDS |
| GTAACTACTAATTTGTTGTT+GGG | 0.420493 | 2_2:-8583778 | Msa0235720:CDS |
| GATGTTGATGACTTTGTAAA+GGG | 0.423416 | 2_2:-8583535 | Msa0235720:CDS |
| TGTAACTACTAATTTGTTGT+TGG | 0.428051 | 2_2:-8583779 | Msa0235720:CDS |
| TCTTGTAGCTTCAGGTCATT+CGG | 0.429260 | 2_2:-8582736 | Msa0235720:intron |
| GACATTCAAGGGGCTCGAAA+TGG | 0.429304 | 2_2:-8582995 | Msa0235720:intron |
| CGCTAGTAGGTCAGCGAATG+AGG | 0.432078 | 2_2:-8583497 | Msa0235720:CDS |
| CAACATCAACGGAATAGAAA+TGG | 0.444445 | 2_2:-8583680 | Msa0235720:CDS |
| CAGGTCATTCGGAGAAGTCT+AGG | 0.444572 | 2_2:-8582725 | Msa0235720:CDS |
| ATTCATGAATCCTATGGATC+TGG | 0.444654 | 2_2:-8581951 | Msa0235720:three_prime_UTR |
| ACAAACTAGTTTCAGTTCAA+AGG | 0.446234 | 2_2:-8585997 | Msa0235720:CDS |
| CTGAAAATCCCAGCGCTAGT+AGG | 0.447730 | 2_2:-8583510 | Msa0235720:CDS |
| TGAGTCTAGCTCCTTTCTTA+AGG | 0.447790 | 2_2:-8584097 | Msa0235720:CDS |
| TACTAATTTGTTGTTGGGAG+AGG | 0.458062 | 2_2:-8583773 | Msa0235720:CDS |
| ATCTCCAAAACCTGACGTTA+AGG | 0.461121 | 2_2:-8583365 | Msa0235720:CDS |
| TCCTTGTTGGAAGGGAACAC+CGG | 0.463719 | 2_2:-8583962 | Msa0235720:CDS |
| CCTAATTATCCAGATATGAA+TGG | 0.464768 | 2_2:+8581774 | None:intergenic |
| GAAGAAGAAAATTAGTTAAG+TGG | 0.473997 | 2_2:+8581891 | None:intergenic |
| GTATTGACTTGGAAGATGTT+TGG | 0.476389 | 2_2:-8586251 | Msa0235720:five_prime_UTR |
| GAAGAGCGATTGAGAGTGAA+GGG | 0.476653 | 2_2:+8586089 | None:intergenic |
| ATTCGCTGACCTACTAGCGC+TGG | 0.479453 | 2_2:+8583501 | None:intergenic |
| TTTGCATCTAGCAGTGGAGG+TGG | 0.480201 | 2_2:-8582862 | Msa0235720:CDS |
| AACAACACCTGTACAATTGT+GGG | 0.481405 | 2_2:-8584165 | Msa0235720:CDS |
| CCAACCATTACCTTAACGTC+AGG | 0.484558 | 2_2:+8583355 | None:intergenic |
| GATGATGATGTCGGTGATGT+TGG | 0.491166 | 2_2:+8583451 | None:intergenic |
| GATGTGAGCATGTTTCAAAA+AGG | 0.492155 | 2_2:-8585807 | Msa0235720:intron |
| GGCTCTAAGTTTAATTCCAT+CGG | 0.493635 | 2_2:-8583941 | Msa0235720:CDS |
| GAACGGCAATGAAGTTGGTC+AGG | 0.493848 | 2_2:-8582833 | Msa0235720:intron |
| AATCAAGCAAAGAACTAAAA+GGG | 0.493888 | 2_2:+8586027 | None:intergenic |
| CGATGTTGATGACTTTGTAA+AGG | 0.495336 | 2_2:-8583536 | Msa0235720:CDS |
| AGGAAGACAACATTCTACTA+TGG | 0.497073 | 2_2:-8581916 | Msa0235720:three_prime_UTR |
| AAAACCTGACGTTAAGGTAA+TGG | 0.497832 | 2_2:-8583359 | Msa0235720:CDS |
| CTTTCTTAAGGCACAAAACA+AGG | 0.498676 | 2_2:-8584085 | Msa0235720:CDS |
| CAAACTAGTTTCAGTTCAAA+GGG | 0.503600 | 2_2:-8585996 | Msa0235720:CDS |
| TGGAGATTCAATTAAAGACT+TGG | 0.504370 | 2_2:+8583381 | None:intergenic |
| AAACAACACCTGTACAATTG+TGG | 0.510308 | 2_2:-8584166 | Msa0235720:CDS |
| TATCATTGGCTTATGGAAGC+TGG | 0.511955 | 2_2:-8582599 | Msa0235720:CDS |
| TATTCAGTGAAGAAACTTCA+AGG | 0.513917 | 2_2:-8586273 | Msa0235720:intron |
| ACCAAGAACGGCAATGAAGT+TGG | 0.514005 | 2_2:-8582838 | Msa0235720:CDS |
| ATTTCAACTTTGCCAGCTCA+AGG | 0.519701 | 2_2:-8585942 | Msa0235720:CDS |
| ATTGTGAACATGATCTTAGT+AGG | 0.520511 | 2_2:-8583273 | Msa0235720:CDS |
| GGTTTGGATTTGGAACAGTA+AGG | 0.524431 | 2_2:+8582959 | None:intergenic |
| AAACTTTCATCACCTTGAGC+TGG | 0.526263 | 2_2:+8585930 | None:intergenic |
| TAACTGATTCATGAATCCTA+TGG | 0.531363 | 2_2:-8581957 | Msa0235720:three_prime_UTR |
| ATGCAAAAGTAGGCGGTGAA+AGG | 0.532881 | 2_2:-8583210 | Msa0235720:CDS |
| AGAAGAGCGATTGAGAGTGA+AGG | 0.533447 | 2_2:+8586088 | None:intergenic |
| AGTGGAGGTGGCACCAAGAA+CGG | 0.535431 | 2_2:-8582850 | Msa0235720:CDS |
| TTCGCTGACCTACTAGCGCT+GGG | 0.542567 | 2_2:+8583502 | None:intergenic |
| AAGAAGAAAATTAGTTAAGT+GGG | 0.542898 | 2_2:+8581892 | None:intergenic |
| CATTTCTATTCCGTTGATGT+TGG | 0.543726 | 2_2:+8583681 | None:intergenic |
| TGATAACAGTCCAGATCCAT+AGG | 0.548372 | 2_2:+8581941 | None:intergenic |
| GTTTGGATTTGGAACAGTAA+GGG | 0.554673 | 2_2:+8582960 | None:intergenic |
| ATCTACAAACTACTAAGCAC+TGG | 0.555531 | 2_2:+8582038 | None:intergenic |
| TGTGGATTCTCCTTGTTGGA+AGG | 0.556271 | 2_2:-8583971 | Msa0235720:CDS |
| GAAACTTCAAGGTATTGACT+TGG | 0.557829 | 2_2:-8586262 | Msa0235720:five_prime_UTR |
| ATGATTGTCAGAATTGGAAG+AGG | 0.558804 | 2_2:+8586055 | None:intergenic |
| AGGTCATTCGGAGAAGTCTA+GGG | 0.562459 | 2_2:-8582724 | Msa0235720:CDS |
| ACAGATTGTGAAATTTCCGA+TGG | 0.569930 | 2_2:+8583925 | None:intergenic |
| GACATCATCATCTCAAGCTA+AGG | 0.572158 | 2_2:-8583440 | Msa0235720:CDS |
| GGTATTGGATATGTTAAGGA+CGG | 0.572974 | 2_2:-8583829 | Msa0235720:CDS |
| TCCAAAACAACAATTCCTCT+GGG | 0.577956 | 2_2:+8582672 | None:intergenic |
| TATTTGCAGGAGTTGAGTCA+AGG | 0.580540 | 2_2:+8583173 | None:intergenic |
| GATGGAATTAAACTTAGAGC+CGG | 0.581730 | 2_2:+8583943 | None:intergenic |
| TTGGCTTATGGAAGCTGGTG+TGG | 0.584648 | 2_2:-8582594 | Msa0235720:CDS |
| TTGGAGAACGACCCTTTGCA+GGG | 0.585408 | 2_2:+8583470 | None:intergenic |
| CCCTTTCTAAAAGTGTCTGA+TGG | 0.588863 | 2_2:-8584198 | Msa0235720:CDS |
| GTGGATTCTCCTTGTTGGAA+GGG | 0.590196 | 2_2:-8583970 | Msa0235720:CDS |
| CAGTATTCAACCAACATCAA+CGG | 0.591588 | 2_2:-8583691 | Msa0235720:CDS |
| TATCAGTTGATATCTTCAGT+GGG | 0.593193 | 2_2:+8584058 | None:intergenic |
| TCACCCAAATTATTAGAGAA+CGG | 0.595772 | 2_2:+8584006 | None:intergenic |
| GGATTCAACACATCAACGGC+AGG | 0.596335 | 2_2:+8584219 | None:intergenic |
| TGATTGTCAGAATTGGAAGA+GGG | 0.598938 | 2_2:+8586056 | None:intergenic |
| CATACTCATGAAAACTGTCA+TGG | 0.606687 | 2_2:-8583749 | Msa0235720:CDS |
| CCTGACGTTAAGGTAATGGT+TGG | 0.609803 | 2_2:-8583355 | Msa0235720:CDS |
| GACATTCTATCGAATTCCGA+AGG | 0.618978 | 2_2:-8584138 | Msa0235720:CDS |
| GGAAAGAACTGTGGAGCTCG+AGG | 0.619071 | 2_2:+8583853 | None:intergenic |
| GCCGGTGTTCCCTTCCAACA+AGG | 0.621250 | 2_2:+8583961 | None:intergenic |
| GGATCTGGACTGTTATCAAG+AGG | 0.622838 | 2_2:-8581936 | Msa0235720:three_prime_UTR |
| TCCTTAACATATCCAATACC+AGG | 0.627311 | 2_2:+8583832 | None:intergenic |
| TAGATCATTAAAGGTTACCA+AGG | 0.638742 | 2_2:-8583134 | Msa0235720:intron |
| GGGTGATAGTGACACTGATG+TGG | 0.639954 | 2_2:-8583989 | Msa0235720:CDS |
| GTATTAGCAACTTCAAAGTG+TGG | 0.642401 | 2_2:+8585837 | None:intergenic |
| ATATCAGTTGATATCTTCAG+TGG | 0.649663 | 2_2:+8584057 | None:intergenic |
| ATAGAATGTGAATTTAGCAG+AGG | 0.659245 | 2_2:+8583616 | None:intergenic |
| TGAATCAACTCCGTCCACAC+AGG | 0.663059 | 2_2:+8583297 | None:intergenic |
| AAAGGGATTCAACACATCAA+CGG | 0.665270 | 2_2:+8584215 | None:intergenic |
| CCAATACCAGGAAAGAACTG+TGG | 0.670251 | 2_2:+8583844 | None:intergenic |
| TCTAATGTGATTGGTCAGAG+TGG | 0.670664 | 2_2:-8582895 | Msa0235720:CDS |
| TGATCCAAGAAGCATCTCTG+TGG | 0.683600 | 2_2:-8583641 | Msa0235720:CDS |
| TGACAAACAAATGCACCCAG+AGG | 0.683639 | 2_2:-8582687 | Msa0235720:CDS |
| ATCAGTTGATATCTTCAGTG+GGG | 0.704864 | 2_2:+8584059 | None:intergenic |
| TTAGCTTGAGATGATGATGT+CGG | 0.724297 | 2_2:+8583442 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAGAAGTTTATATATTTTTT+TGG | - | chr2_2:8582433-8582452 | Msa0235720:intron | 15.0% |
| !!! | TTTTCATAAAAAAACTTATC+TGG | - | chr2_2:8582529-8582548 | Msa0235720:intron | 15.0% |
| !! | TTATCTGCAAATATAAAATT+TGG | - | chr2_2:8583267-8583286 | Msa0235720:CDS | 15.0% |
| !!! | AAATAAAATGACTCTTTTAT+TGG | - | chr2_2:8583420-8583439 | Msa0235720:CDS | 15.0% |
| !! | TTAAAAATAGTTTCAAGAAT+AGG | + | chr2_2:8583448-8583467 | None:intergenic | 15.0% |
| !! | ACATATTATCAACTAATTAT+TGG | - | chr2_2:8586051-8586070 | Msa0235720:CDS | 15.0% |
| !!! | TCATATCTTTGTTTTTTGTT+TGG | + | chr2_2:8581907-8581926 | None:intergenic | 20.0% |
| !!! | TTTAAAAAATGTCTAAAGCA+AGG | + | chr2_2:8582348-8582367 | None:intergenic | 20.0% |
| !!! | TTGCTTTAGACATTTTTTAA+AGG | - | chr2_2:8582347-8582366 | Msa0235720:intron | 20.0% |
| !!! | TGCTTTAGACATTTTTTAAA+GGG | - | chr2_2:8582348-8582367 | Msa0235720:intron | 20.0% |
| !! | TATTATATATCATCATAAGC+TGG | - | chr2_2:8582999-8583018 | Msa0235720:intron | 20.0% |
| !!! | AATATTGATATTTGAAGTGA+TGG | - | chr2_2:8583533-8583552 | Msa0235720:CDS | 20.0% |
| !! | TTTAACTAAAAAAACACTAG+TGG | + | chr2_2:8583700-8583719 | None:intergenic | 20.0% |
| !!! | AAAGTATTATGTTTTTCTGT+TGG | + | chr2_2:8584177-8584196 | None:intergenic | 20.0% |
| !!! | ATCTCTAGTAGATTTTAATA+TGG | - | chr2_2:8584332-8584351 | Msa0235720:intron | 20.0% |
| !!! | TCTCTAGTAGATTTTAATAT+GGG | - | chr2_2:8584333-8584352 | Msa0235720:intron | 20.0% |
| !! | AAAGAAAAACTTGTAACTAT+AGG | - | chr2_2:8584495-8584514 | Msa0235720:intron | 20.0% |
| !!! | AATGATTTTAATGCAAAAGT+AGG | - | chr2_2:8584834-8584853 | Msa0235720:intron | 20.0% |
| !! | TTATCTTGATAGATCATTAA+AGG | - | chr2_2:8584911-8584930 | Msa0235720:intron | 20.0% |
| !!! | AATTGTTGTTTTGGAATTTA+TGG | - | chr2_2:8585390-8585409 | Msa0235720:intron | 20.0% |
| !!! | GGAAATTTAAAACTTATCAT+TGG | - | chr2_2:8585441-8585460 | Msa0235720:intron | 20.0% |
| !! | TATATTATGCATACTAACAT+GGG | - | chr2_2:8585941-8585960 | Msa0235720:CDS | 20.0% |
| !! | AAGAAGAAAATTAGTTAAGT+GGG | + | chr2_2:8586165-8586184 | None:intergenic | 20.0% |
| !!! | TGTTTTGATGAAAGGAAAAT+TGG | + | chr2_2:8581844-8581863 | None:intergenic | 25.0% |
| ! | ACATCTTCAACAATTGTAAA+AGG | - | chr2_2:8581861-8581880 | Msa0235720:three_prime_UTR | 25.0% |
| ! | AATCAAGCAAAGAACTAAAA+GGG | + | chr2_2:8582030-8582049 | None:intergenic | 25.0% |
| !! | TTTTATGCAATTCCAGAAAA+GGG | + | chr2_2:8582165-8582184 | None:intergenic | 25.0% |
| !! | TTTTTATGCAATTCCAGAAA+AGG | + | chr2_2:8582166-8582185 | None:intergenic | 25.0% |
| !!! | TTTCTGGAATTGCATAAAAA+TGG | - | chr2_2:8582166-8582185 | Msa0235720:intron | 25.0% |
| !!! | CTAGTTTTAGATTGAAACAT+AGG | + | chr2_2:8582414-8582433 | None:intergenic | 25.0% |
| ! | AACAATGCATAAAATATGCA+AGG | + | chr2_2:8582620-8582639 | None:intergenic | 25.0% |
| !!! | GTTTTGTAAGTTTGAGTTTA+GGG | + | chr2_2:8582754-8582773 | None:intergenic | 25.0% |
| !!! | AGTTTTGTAAGTTTGAGTTT+AGG | + | chr2_2:8582755-8582774 | None:intergenic | 25.0% |
| ! | TAAACTCAAACTTACAAAAC+TGG | - | chr2_2:8582754-8582773 | Msa0235720:intron | 25.0% |
| ! | ATGCTCTACAGAAATTATTT+AGG | - | chr2_2:8583206-8583225 | Msa0235720:CDS | 25.0% |
| !! | TAGTTGACTTTGATTTCTAA+AGG | + | chr2_2:8583240-8583259 | None:intergenic | 25.0% |
| ! | TCTGCAAATATAAAATTTGG+AGG | - | chr2_2:8583270-8583289 | Msa0235720:CDS | 25.0% |
| !!! | GAGTCATTTTATTTCTATCT+TGG | + | chr2_2:8583414-8583433 | None:intergenic | 25.0% |
| ! | AAATCCGTTCTCTAATAATT+TGG | - | chr2_2:8584044-8584063 | Msa0235720:CDS | 25.0% |
| ! | AATCCGTTCTCTAATAATTT+GGG | - | chr2_2:8584045-8584064 | Msa0235720:CDS | 25.0% |
| ! | AACAACAAATTAGTAGTTAC+AGG | + | chr2_2:8584276-8584295 | None:intergenic | 25.0% |
| !!! | TGTAACTACTAATTTGTTGT+TGG | - | chr2_2:8584275-8584294 | Msa0235720:intron | 25.0% |
| !!! | GTAACTACTAATTTGTTGTT+GGG | - | chr2_2:8584276-8584295 | Msa0235720:intron | 25.0% |
| !! | GATCTTCTAAAAAGATTTGA+AGG | - | chr2_2:8584645-8584664 | Msa0235720:intron | 25.0% |
| !! | TCAGATTATTGATTATTTGC+AGG | + | chr2_2:8584815-8584834 | None:intergenic | 25.0% |
| ! | AGATAAAAAGAACTATTTGC+AGG | + | chr2_2:8584897-8584916 | None:intergenic | 25.0% |
| ! | AATATAGATCATACATACCT+TGG | + | chr2_2:8584940-8584959 | None:intergenic | 25.0% |
| ! | AAAACAAACAGATTTGATTC+TGG | + | chr2_2:8585272-8585291 | None:intergenic | 25.0% |
| !!! | TAAAACTTATCATTGGCTTA+TGG | - | chr2_2:8585448-8585467 | Msa0235720:intron | 25.0% |
| ! | TGTAAATTGCAAAAATGTTG+CGG | - | chr2_2:8585484-8585503 | Msa0235720:intron | 25.0% |
| !!! | CTACTTGCTATAGTATTTTT+AGG | + | chr2_2:8585522-8585541 | None:intergenic | 25.0% |
| !! | ATTATTTCCATAAGCTCTTT+TGG | - | chr2_2:8585674-8585693 | Msa0235720:intron | 25.0% |
| ! | CTATATTATGCATACTAACA+TGG | - | chr2_2:8585940-8585959 | Msa0235720:CDS | 25.0% |
| !!! | GATTGTGTATTTCTATTTTC+AGG | - | chr2_2:8585973-8585992 | Msa0235720:CDS | 25.0% |
| ! | GAAGAAGAAAATTAGTTAAG+TGG | + | chr2_2:8586166-8586185 | None:intergenic | 25.0% |
| !! | CTTAACTAATTTTCTTCTTC+TGG | - | chr2_2:8586166-8586185 | Msa0235720:five_prime_UTR | 25.0% |
| TATTCAGTGAAGAAACTTCA+AGG | - | chr2_2:8581781-8581800 | Msa0235720:three_prime_UTR | 30.0% | |
| !!! | GTTGAAGATGTTTTGATGAA+AGG | + | chr2_2:8581852-8581871 | None:intergenic | 30.0% |
| GAATCAAGCAAAGAACTAAA+AGG | + | chr2_2:8582031-8582050 | None:intergenic | 30.0% | |
| ! | ACAAACTAGTTTCAGTTCAA+AGG | - | chr2_2:8582057-8582076 | Msa0235720:exon | 30.0% |
| ! | CAAACTAGTTTCAGTTCAAA+GGG | - | chr2_2:8582058-8582077 | Msa0235720:exon | 30.0% |
| !! | TTGAAGTTGATGTGCTTAAT+TGG | - | chr2_2:8582194-8582213 | Msa0235720:intron | 30.0% |
| AGCTATTCTTTCATTGTTAG+AGG | + | chr2_2:8582493-8582512 | None:intergenic | 30.0% | |
| CATAAAATATGCAAGGTTTG+GGG | + | chr2_2:8582613-8582632 | None:intergenic | 30.0% | |
| GCATAAAATATGCAAGGTTT+GGG | + | chr2_2:8582614-8582633 | None:intergenic | 30.0% | |
| TGCATAAAATATGCAAGGTT+TGG | + | chr2_2:8582615-8582634 | None:intergenic | 30.0% | |
| CTAATACCATCTTAGAATTC+AGG | - | chr2_2:8582724-8582743 | Msa0235720:CDS | 30.0% | |
| TGTGACAATGTGTTTATAAG+TGG | + | chr2_2:8582800-8582819 | None:intergenic | 30.0% | |
| TCTTAGTTTCCCTATTACAT+TGG | - | chr2_2:8583054-8583073 | Msa0235720:intron | 30.0% | |
| AGTGAGATTCCAATGTAATA+GGG | + | chr2_2:8583066-8583085 | None:intergenic | 30.0% | |
| TAGTGAGATTCCAATGTAAT+AGG | + | chr2_2:8583067-8583086 | None:intergenic | 30.0% | |
| ! | GCATGAATTTTATTGCTGAA+AGG | + | chr2_2:8583120-8583139 | None:intergenic | 30.0% |
| CTAAGAGTGAAGAATTACAA+AGG | - | chr2_2:8583171-8583190 | Msa0235720:CDS | 30.0% | |
| TCAACTAACCAATTTGAAGA+TGG | + | chr2_2:8583343-8583362 | None:intergenic | 30.0% | |
| !!! | TGATGGAAATGTTTTAGCTA+CGG | - | chr2_2:8583550-8583569 | Msa0235720:CDS | 30.0% |
| GACAAATAAATGAGAAACTG+TGG | - | chr2_2:8583793-8583812 | Msa0235720:CDS | 30.0% | |
| ! | TATCAGTTGATATCTTCAGT+GGG | + | chr2_2:8583999-8584018 | None:intergenic | 30.0% |
| ! | ATATCAGTTGATATCTTCAG+TGG | + | chr2_2:8584000-8584019 | None:intergenic | 30.0% |
| !! | TTATTAGAGAACGGATTTTG+AGG | + | chr2_2:8584042-8584061 | None:intergenic | 30.0% |
| TCACCCAAATTATTAGAGAA+CGG | + | chr2_2:8584051-8584070 | None:intergenic | 30.0% | |
| ATAGAATGTGAATTTAGCAG+AGG | + | chr2_2:8584441-8584460 | None:intergenic | 30.0% | |
| !! | GATGTTGATGACTTTGTAAA+GGG | - | chr2_2:8584519-8584538 | Msa0235720:intron | 30.0% |
| TGGAGATTCAATTAAAGACT+TGG | + | chr2_2:8584676-8584695 | None:intergenic | 30.0% | |
| ATTGTGAACATGATCTTAGT+AGG | - | chr2_2:8584781-8584800 | Msa0235720:intron | 30.0% | |
| !! | GATTTTAATGCAAAAGTAGG+CGG | - | chr2_2:8584837-8584856 | Msa0235720:intron | 30.0% |
| TAGATCATTAAAGGTTACCA+AGG | - | chr2_2:8584920-8584939 | Msa0235720:intron | 30.0% | |
| GAGCAGAGAATGAAATAAAA+GGG | + | chr2_2:8585001-8585020 | None:intergenic | 30.0% | |
| TGAGCAGAGAATGAAATAAA+AGG | + | chr2_2:8585002-8585021 | None:intergenic | 30.0% | |
| TATCTGCAAAATGGTAATAC+TGG | - | chr2_2:8585123-8585142 | Msa0235720:intron | 30.0% | |
| GCTATAGTTTCTAATGTGAT+TGG | - | chr2_2:8585150-8585169 | Msa0235720:intron | 30.0% | |
| TATGGAAACAACTTATGACA+TGG | - | chr2_2:8585634-8585653 | Msa0235720:intron | 30.0% | |
| AAGTTATCCAAAAGAGCTTA+TGG | + | chr2_2:8585684-8585703 | None:intergenic | 30.0% | |
| TTAAGCTGTATATCCAAACA+AGG | - | chr2_2:8585820-8585839 | Msa0235720:CDS | 30.0% | |
| TATATCCAAACAAGGTCTAT+AGG | - | chr2_2:8585828-8585847 | Msa0235720:CDS | 30.0% | |
| !! | ATTTCTATTTTCAGGAGTTG+TGG | - | chr2_2:8585981-8586000 | Msa0235720:CDS | 30.0% |
| ! | TAACTGATTCATGAATCCTA+TGG | - | chr2_2:8586097-8586116 | Msa0235720:CDS | 30.0% |
| CCTAATTATCCAGATATGAA+TGG | + | chr2_2:8586283-8586302 | None:intergenic | 30.0% | |
| CCATTCATATCTGGATAATT+AGG | - | chr2_2:8586280-8586299 | Msa0235720:intron | 30.0% | |
| !! | GAAACTTCAAGGTATTGACT+TGG | - | chr2_2:8581792-8581811 | Msa0235720:three_prime_UTR | 35.0% |
| !! | GTATTGACTTGGAAGATGTT+TGG | - | chr2_2:8581803-8581822 | Msa0235720:three_prime_UTR | 35.0% |
| TGATTGTCAGAATTGGAAGA+GGG | + | chr2_2:8582001-8582020 | None:intergenic | 35.0% | |
| ATGATTGTCAGAATTGGAAG+AGG | + | chr2_2:8582002-8582021 | None:intergenic | 35.0% | |
| GTCATCATGATTGTCAGAAT+TGG | + | chr2_2:8582008-8582027 | None:intergenic | 35.0% | |
| !! | TTTTGAAGAACACCCTTTTC+TGG | - | chr2_2:8582150-8582169 | Msa0235720:intron | 35.0% |
| GTATTAGCAACTTCAAAGTG+TGG | + | chr2_2:8582220-8582239 | None:intergenic | 35.0% | |
| GATGTGAGCATGTTTCAAAA+AGG | - | chr2_2:8582247-8582266 | Msa0235720:intron | 35.0% | |
| CATTGTTAGAGGAACGATTA+AGG | + | chr2_2:8582482-8582501 | None:intergenic | 35.0% | |
| ! | AACTTATCTGGAGCATAACT+TGG | - | chr2_2:8582541-8582560 | Msa0235720:intron | 35.0% |
| !!! | TAGCGGAAACCTTTTTTTTG+TGG | - | chr2_2:8582572-8582591 | Msa0235720:CDS | 35.0% |
| GAGCTTATCCAAGATCTATT+GGG | + | chr2_2:8582705-8582724 | None:intergenic | 35.0% | |
| AGAGCTTATCCAAGATCTAT+TGG | + | chr2_2:8582706-8582725 | None:intergenic | 35.0% | |
| !! | TACTTTTAAGAGTCCCATGT+TGG | + | chr2_2:8582834-8582853 | None:intergenic | 35.0% |
| GTAATTCTTCACTCTTAGAG+AGG | + | chr2_2:8583169-8583188 | None:intergenic | 35.0% | |
| CACTGTATACAGTGGTAAAT+TGG | - | chr2_2:8583490-8583509 | Msa0235720:CDS | 35.0% | |
| TCAGTTATGCTTCTGAGTTA+GGG | - | chr2_2:8583644-8583663 | Msa0235720:CDS | 35.0% | |
| ATCAAAATCTTGCGCCAATT+TGG | - | chr2_2:8583668-8583687 | Msa0235720:CDS | 35.0% | |
| AAAGGGATTCAACACATCAA+CGG | + | chr2_2:8583842-8583861 | None:intergenic | 35.0% | |
| !! | CCATCAGACACTTTTAGAAA+GGG | + | chr2_2:8583859-8583878 | None:intergenic | 35.0% |
| AAACAACACCTGTACAATTG+TGG | - | chr2_2:8583888-8583907 | Msa0235720:CDS | 35.0% | |
| AACAACACCTGTACAATTGT+GGG | - | chr2_2:8583889-8583908 | Msa0235720:CDS | 35.0% | |
| !!! | CTTGTTTTGTGCCTTAAGAA+AGG | + | chr2_2:8583971-8583990 | None:intergenic | 35.0% |
| CTTTCTTAAGGCACAAAACA+AGG | - | chr2_2:8583969-8583988 | Msa0235720:CDS | 35.0% | |
| ! | ATCAGTTGATATCTTCAGTG+GGG | + | chr2_2:8583998-8584017 | None:intergenic | 35.0% |
| GATGGAATTAAACTTAGAGC+CGG | + | chr2_2:8584114-8584133 | None:intergenic | 35.0% | |
| !! | GGCTCTAAGTTTAATTCCAT+CGG | - | chr2_2:8584113-8584132 | Msa0235720:CDS | 35.0% |
| ACAGATTGTGAAATTTCCGA+TGG | + | chr2_2:8584132-8584151 | None:intergenic | 35.0% | |
| ! | TCCTGGTATTGGATATGTTA+AGG | - | chr2_2:8584221-8584240 | Msa0235720:CDS | 35.0% |
| TCCTTAACATATCCAATACC+AGG | + | chr2_2:8584225-8584244 | None:intergenic | 35.0% | |
| ! | GGTATTGGATATGTTAAGGA+CGG | - | chr2_2:8584225-8584244 | Msa0235720:CDS | 35.0% |
| !! | TACTAATTTGTTGTTGGGAG+AGG | - | chr2_2:8584281-8584300 | Msa0235720:intron | 35.0% |
| CATACTCATGAAAACTGTCA+TGG | - | chr2_2:8584305-8584324 | Msa0235720:intron | 35.0% | |
| CAGTATTCAACCAACATCAA+CGG | - | chr2_2:8584363-8584382 | Msa0235720:intron | 35.0% | |
| CATTTCTATTCCGTTGATGT+TGG | + | chr2_2:8584376-8584395 | None:intergenic | 35.0% | |
| CAACATCAACGGAATAGAAA+TGG | - | chr2_2:8584374-8584393 | Msa0235720:intron | 35.0% | |
| !! | CGATGTTGATGACTTTGTAA+AGG | - | chr2_2:8584518-8584537 | Msa0235720:intron | 35.0% |
| ! | TTAGCTTGAGATGATGATGT+CGG | + | chr2_2:8584615-8584634 | None:intergenic | 35.0% |
| ! | ATTACCTTAACGTCAGGTTT+TGG | + | chr2_2:8584696-8584715 | None:intergenic | 35.0% |
| AAAACCTGACGTTAAGGTAA+TGG | - | chr2_2:8584695-8584714 | Msa0235720:intron | 35.0% | |
| !! | TGAAATAAAAGGGCACTGTT+AGG | + | chr2_2:8584991-8585010 | None:intergenic | 35.0% |
| TGCATATATGTCGACATTCA+AGG | - | chr2_2:8585047-8585066 | Msa0235720:intron | 35.0% | |
| GCATATATGTCGACATTCAA+GGG | - | chr2_2:8585048-8585067 | Msa0235720:intron | 35.0% | |
| CATATATGTCGACATTCAAG+GGG | - | chr2_2:8585049-8585068 | Msa0235720:intron | 35.0% | |
| ! | GTTTGGATTTGGAACAGTAA+GGG | + | chr2_2:8585097-8585116 | None:intergenic | 35.0% |
| TCCAAAACAACAATTCCTCT+GGG | + | chr2_2:8585385-8585404 | None:intergenic | 35.0% | |
| TTCCAAAACAACAATTCCTC+TGG | + | chr2_2:8585386-8585405 | None:intergenic | 35.0% | |
| AAGCTTACATTTCCTTCTCT+AGG | - | chr2_2:8585543-8585562 | Msa0235720:intron | 35.0% | |
| TCACAAGTGCTTATGTAAGT+AGG | + | chr2_2:8585597-8585616 | None:intergenic | 35.0% | |
| TATCACCTATAGACCTTGTT+TGG | + | chr2_2:8585836-8585855 | None:intergenic | 35.0% | |
| ATACTAACATGGGTGATGAA+TGG | - | chr2_2:8585951-8585970 | Msa0235720:CDS | 35.0% | |
| ATCTACAAACTACTAAGCAC+TGG | + | chr2_2:8586019-8586038 | None:intergenic | 35.0% | |
| ATTCATGAATCCTATGGATC+TGG | - | chr2_2:8586103-8586122 | Msa0235720:CDS | 35.0% | |
| AGGAAGACAACATTCTACTA+TGG | - | chr2_2:8586138-8586157 | Msa0235720:exon | 35.0% | |
| GTTGATCTTCCATTCATATC+TGG | - | chr2_2:8586271-8586290 | Msa0235720:intron | 35.0% | |
| ! | TCAGAATTGGAAGAGGGTTT+TGG | + | chr2_2:8581995-8582014 | None:intergenic | 40.0% |
| ATTTCAACTTTGCCAGCTCA+AGG | - | chr2_2:8582112-8582131 | Msa0235720:intron | 40.0% | |
| AAACTTTCATCACCTTGAGC+TGG | + | chr2_2:8582127-8582146 | None:intergenic | 40.0% | |
| ! | ATAACTTGGTGAGCTGATAG+CGG | - | chr2_2:8582555-8582574 | Msa0235720:intron | 40.0% |
| !!! | CGGAAACCTTTTTTTTGTGG+TGG | - | chr2_2:8582575-8582594 | Msa0235720:CDS | 40.0% |
| !!! | ACCTTTTTTTTGTGGTGGCT+AGG | - | chr2_2:8582580-8582599 | Msa0235720:CDS | 40.0% |
| !!! | CCTTTTTTTTGTGGTGGCTA+GGG | - | chr2_2:8582581-8582600 | Msa0235720:CDS | 40.0% |
| ACTATCAGGTTTCCGATATC+AGG | + | chr2_2:8582671-8582690 | None:intergenic | 40.0% | |
| GATATCGGAAACCTGATAGT+AGG | - | chr2_2:8582671-8582690 | Msa0235720:CDS | 40.0% | |
| TGTAGTGTCCCAATAGATCT+TGG | - | chr2_2:8582694-8582713 | Msa0235720:CDS | 40.0% | |
| ! | GGACAACCTGAATTCTAAGA+TGG | + | chr2_2:8582733-8582752 | None:intergenic | 40.0% |
| ! | ACTTACAAAACTGGCCTGTA+AGG | - | chr2_2:8582763-8582782 | Msa0235720:intron | 40.0% |
| TGAAAGGTTTCTACACGTCA+TGG | + | chr2_2:8583104-8583123 | None:intergenic | 40.0% | |
| ATTTGGAGGTCTAGAGAAGT+TGG | - | chr2_2:8583284-8583303 | Msa0235720:CDS | 40.0% | |
| GCTTCTCTCCATCTTCAAAT+TGG | - | chr2_2:8583332-8583351 | Msa0235720:CDS | 40.0% | |
| CTACGGCTAAATCATTGTCT+TGG | - | chr2_2:8583567-8583586 | Msa0235720:CDS | 40.0% | |
| CTCAGTTATGCTTCTGAGTT+AGG | - | chr2_2:8583643-8583662 | Msa0235720:CDS | 40.0% | |
| ACTAGTGGTCAATGCCAAAT+TGG | + | chr2_2:8583685-8583704 | None:intergenic | 40.0% | |
| !! | CCCTTTCTAAAAGTGTCTGA+TGG | - | chr2_2:8583856-8583875 | Msa0235720:CDS | 40.0% |
| !! | GCCATCAGACACTTTTAGAA+AGG | + | chr2_2:8583860-8583879 | None:intergenic | 40.0% |
| ! | GTCTTTTCCCACAATTGTAC+AGG | + | chr2_2:8583899-8583918 | None:intergenic | 40.0% |
| GACATTCTATCGAATTCCGA+AGG | - | chr2_2:8583916-8583935 | Msa0235720:CDS | 40.0% | |
| ! | AACAGCATGTTTTGTGCCTT+CGG | + | chr2_2:8583935-8583954 | None:intergenic | 40.0% |
| ! | TGAGTCTAGCTCCTTTCTTA+AGG | - | chr2_2:8583957-8583976 | Msa0235720:CDS | 40.0% |
| ! | AATGAGGTTTTCCCTGCAAA+GGG | - | chr2_2:8584573-8584592 | Msa0235720:intron | 40.0% |
| GACATCATCATCTCAAGCTA+AGG | - | chr2_2:8584614-8584633 | Msa0235720:intron | 40.0% | |
| ATCTCCAAAACCTGACGTTA+AGG | - | chr2_2:8584689-8584708 | Msa0235720:intron | 40.0% | |
| ATTGCTTGCAAAAACCTGTG+TGG | - | chr2_2:8584743-8584762 | Msa0235720:intron | 40.0% | |
| TATTTGCAGGAGTTGAGTCA+AGG | + | chr2_2:8584884-8584903 | None:intergenic | 40.0% | |
| ! | GGTTTGGATTTGGAACAGTA+AGG | + | chr2_2:8585098-8585117 | None:intergenic | 40.0% |
| !! | AGATAGAGCTGGTTTGGATT+TGG | + | chr2_2:8585108-8585127 | None:intergenic | 40.0% |
| ! | TTTTGCAGATAGAGCTGGTT+TGG | + | chr2_2:8585114-8585133 | None:intergenic | 40.0% |
| AACCAGCTCTATCTGCAAAA+TGG | - | chr2_2:8585114-8585133 | Msa0235720:intron | 40.0% | |
| ! | TACCATTTTGCAGATAGAGC+TGG | + | chr2_2:8585119-8585138 | None:intergenic | 40.0% |
| ! | TCTAATGTGATTGGTCAGAG+TGG | - | chr2_2:8585159-8585178 | Msa0235720:intron | 40.0% |
| ! | AGTTCTTTTGCATCTAGCAG+TGG | - | chr2_2:8585186-8585205 | Msa0235720:intron | 40.0% |
| TTCCGAATTCTTGTAGCTTC+AGG | - | chr2_2:8585310-8585329 | Msa0235720:intron | 40.0% | |
| GACCTGAAGCTACAAGAATT+CGG | + | chr2_2:8585315-8585334 | None:intergenic | 40.0% | |
| TCTTGTAGCTTCAGGTCATT+CGG | - | chr2_2:8585318-8585337 | Msa0235720:intron | 40.0% | |
| !!! | ACCCAGAGGAATTGTTGTTT+TGG | - | chr2_2:8585381-8585400 | Msa0235720:intron | 40.0% |
| CTGAAGCAGAACGTTGTTAT+AGG | - | chr2_2:8585420-8585439 | Msa0235720:intron | 40.0% | |
| !! | TATCATTGGCTTATGGAAGC+TGG | - | chr2_2:8585455-8585474 | Msa0235720:intron | 40.0% |
| !! | TTTCCTTCTCTAGGACTGTT+TGG | - | chr2_2:8585552-8585571 | Msa0235720:intron | 40.0% |
| ACTTGTGAGACTGTTTGACA+GGG | - | chr2_2:8585609-8585628 | Msa0235720:intron | 40.0% | |
| AGACTGTTTGACAGGGATTA+TGG | - | chr2_2:8585616-8585635 | Msa0235720:intron | 40.0% | |
| !! | TCTATTTTCAGGAGTTGTGG+AGG | - | chr2_2:8585984-8586003 | Msa0235720:CDS | 40.0% |
| TGATAACAGTCCAGATCCAT+AGG | + | chr2_2:8586116-8586135 | None:intergenic | 40.0% | |
| ! | AGAGTGAAGGGTTTTGCAAG+TGG | + | chr2_2:8581956-8581975 | None:intergenic | 45.0% |
| GAAGAGCGATTGAGAGTGAA+GGG | + | chr2_2:8581968-8581987 | None:intergenic | 45.0% | |
| AGAAGAGCGATTGAGAGTGA+AGG | + | chr2_2:8581969-8581988 | None:intergenic | 45.0% | |
| CCCTAGCCACCACAAAAAAA+AGG | + | chr2_2:8582584-8582603 | None:intergenic | 45.0% | |
| TGGTGTAGTCTTCACCTTAC+AGG | + | chr2_2:8582780-8582799 | None:intergenic | 45.0% | |
| ACACCACATCTCATCCAACA+TGG | - | chr2_2:8582817-8582836 | Msa0235720:intron | 45.0% | |
| CACCACATCTCATCCAACAT+GGG | - | chr2_2:8582818-8582837 | Msa0235720:intron | 45.0% | |
| TCGTGCAGAAGTAGAGGTAA+AGG | + | chr2_2:8582906-8582925 | None:intergenic | 45.0% | |
| AACGTATCGTGCAGAAGTAG+AGG | + | chr2_2:8582912-8582931 | None:intergenic | 45.0% | |
| ! | TGAAGATGGAGAGAAGCACA+GGG | + | chr2_2:8583329-8583348 | None:intergenic | 45.0% |
| ! | TTGAAGATGGAGAGAAGCAC+AGG | + | chr2_2:8583330-8583349 | None:intergenic | 45.0% |
| ACTGTATACAGTGACACGCA+TGG | + | chr2_2:8583483-8583502 | None:intergenic | 45.0% | |
| ! | ATGCGTGTCACTGTATACAG+TGG | - | chr2_2:8583482-8583501 | Msa0235720:CDS | 45.0% |
| CTGATGTGGATTCTCCTTGT+TGG | - | chr2_2:8584079-8584098 | Msa0235720:CDS | 45.0% | |
| TGTGGATTCTCCTTGTTGGA+AGG | - | chr2_2:8584083-8584102 | Msa0235720:CDS | 45.0% | |
| GTGGATTCTCCTTGTTGGAA+GGG | - | chr2_2:8584084-8584103 | Msa0235720:CDS | 45.0% | |
| CCAATACCAGGAAAGAACTG+TGG | + | chr2_2:8584213-8584232 | None:intergenic | 45.0% | |
| CCACAGTTCTTTCCTGGTAT+TGG | - | chr2_2:8584210-8584229 | Msa0235720:CDS | 45.0% | |
| !! | TGATCCAAGAAGCATCTCTG+TGG | - | chr2_2:8584413-8584432 | Msa0235720:intron | 45.0% |
| ! | GAATGAGGTTTTCCCTGCAA+AGG | - | chr2_2:8584572-8584591 | Msa0235720:intron | 45.0% |
| ! | GATGATGATGTCGGTGATGT+TGG | + | chr2_2:8584606-8584625 | None:intergenic | 45.0% |
| CCAACCATTACCTTAACGTC+AGG | + | chr2_2:8584702-8584721 | None:intergenic | 45.0% | |
| ! | CCTGACGTTAAGGTAATGGT+TGG | - | chr2_2:8584699-8584718 | Msa0235720:intron | 45.0% |
| CTTGCAAAAACCTGTGTGGA+CGG | - | chr2_2:8584747-8584766 | Msa0235720:intron | 45.0% | |
| ATGCAAAAGTAGGCGGTGAA+AGG | - | chr2_2:8584844-8584863 | Msa0235720:intron | 45.0% | |
| ! | TCTTTTGCATCTAGCAGTGG+AGG | - | chr2_2:8585189-8585208 | Msa0235720:intron | 45.0% |
| ACCAAGAACGGCAATGAAGT+TGG | - | chr2_2:8585216-8585235 | Msa0235720:intron | 45.0% | |
| ACCAACTTCATTGCCGTTCT+TGG | + | chr2_2:8585220-8585239 | None:intergenic | 45.0% | |
| ! | AAGTTGGTCAGGTACCCATA+TGG | - | chr2_2:8585232-8585251 | Msa0235720:intron | 45.0% |
| TTACTAGCACGCAGCCATAT+GGG | + | chr2_2:8585249-8585268 | None:intergenic | 45.0% | |
| AGGTCATTCGGAGAAGTCTA+GGG | - | chr2_2:8585330-8585349 | Msa0235720:intron | 45.0% | |
| TGACAAACAAATGCACCCAG+AGG | - | chr2_2:8585367-8585386 | Msa0235720:intron | 45.0% | |
| CATCCAAACAGTCCTAGAGA+AGG | + | chr2_2:8585558-8585577 | None:intergenic | 45.0% | |
| CACTTGTGAGACTGTTTGAC+AGG | - | chr2_2:8585608-8585627 | Msa0235720:intron | 45.0% | |
| GGATCTGGACTGTTATCAAG+AGG | - | chr2_2:8586118-8586137 | Msa0235720:CDS | 45.0% | |
| !!! | TATTCTAAATAAAATTTTAA+AGG | + | chr2_2:8583765-8583784 | None:intergenic | 5.0% |
| AGCTCACGAGGACCTGATAT+CGG | - | chr2_2:8582656-8582675 | Msa0235720:CDS | 50.0% | |
| GGGACACTACACCTACTATC+AGG | + | chr2_2:8582685-8582704 | None:intergenic | 50.0% | |
| GTCCCATGTTGGATGAGATG+TGG | + | chr2_2:8582823-8582842 | None:intergenic | 50.0% | |
| ! | GAAGATGGAGAGAAGCACAG+GGG | + | chr2_2:8583328-8583347 | None:intergenic | 50.0% |
| GGATTCAACACATCAACGGC+AGG | + | chr2_2:8583838-8583857 | None:intergenic | 50.0% | |
| ! | GGGTGATAGTGACACTGATG+TGG | - | chr2_2:8584065-8584084 | Msa0235720:CDS | 50.0% |
| TCCTTGTTGGAAGGGAACAC+CGG | - | chr2_2:8584092-8584111 | Msa0235720:CDS | 50.0% | |
| GGATCCACAGAGATGCTTCT+TGG | + | chr2_2:8584420-8584439 | None:intergenic | 50.0% | |
| CTGAAAATCCCAGCGCTAGT+AGG | - | chr2_2:8584544-8584563 | Msa0235720:intron | 50.0% | |
| TTGGAGAACGACCCTTTGCA+GGG | + | chr2_2:8584587-8584606 | None:intergenic | 50.0% | |
| TGAATCAACTCCGTCCACAC+AGG | + | chr2_2:8584760-8584779 | None:intergenic | 50.0% | |
| GGCTGCTGCTGTGCATAAAT+TGG | + | chr2_2:8584970-8584989 | None:intergenic | 50.0% | |
| GACATTCAAGGGGCTCGAAA+TGG | - | chr2_2:8585059-8585078 | Msa0235720:intron | 50.0% | |
| TTTGCATCTAGCAGTGGAGG+TGG | - | chr2_2:8585192-8585211 | Msa0235720:intron | 50.0% | |
| ! | GAACGGCAATGAAGTTGGTC+AGG | - | chr2_2:8585221-8585240 | Msa0235720:intron | 50.0% |
| GTTACTAGCACGCAGCCATA+TGG | + | chr2_2:8585250-8585269 | None:intergenic | 50.0% | |
| CAGGTCATTCGGAGAAGTCT+AGG | - | chr2_2:8585329-8585348 | Msa0235720:intron | 50.0% | |
| TTGGCTTATGGAAGCTGGTG+TGG | - | chr2_2:8585460-8585479 | Msa0235720:intron | 50.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | + | chr2_2:8582647-8582666 | None:intergenic | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | - | chr2_2:8582644-8582663 | Msa0235720:CDS | 55.0% | |
| ! | GAGAGAAGCACAGGGGCTTA+GGG | + | chr2_2:8583321-8583340 | None:intergenic | 55.0% |
| GGAAAGAACTGTGGAGCTCG+AGG | + | chr2_2:8584204-8584223 | None:intergenic | 55.0% | |
| CGAGCTCCACAGTTCTTTCC+TGG | - | chr2_2:8584204-8584223 | Msa0235720:CDS | 55.0% | |
| TTCGCTGACCTACTAGCGCT+GGG | + | chr2_2:8584555-8584574 | None:intergenic | 55.0% | |
| ATTCGCTGACCTACTAGCGC+TGG | + | chr2_2:8584556-8584575 | None:intergenic | 55.0% | |
| CGCTAGTAGGTCAGCGAATG+AGG | - | chr2_2:8584557-8584576 | Msa0235720:intron | 55.0% | |
| GTTGGAGAACGACCCTTTGC+AGG | + | chr2_2:8584588-8584607 | None:intergenic | 55.0% | |
| AGTGGAGGTGGCACCAAGAA+CGG | - | chr2_2:8585204-8585223 | Msa0235720:intron | 55.0% | |
| ! | GGAGAGAAGCACAGGGGCTT+AGG | + | chr2_2:8583322-8583341 | None:intergenic | 60.0% |
| GCCGGTGTTCCCTTCCAACA+AGG | + | chr2_2:8584096-8584115 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 8581751 | 8586325 | 8581751 | ID=Msa0235720;Name=Msa0235720 |
| chr2_2 | mRNA | 8581751 | 8586325 | 8581751 | ID=Msa0235720-mRNA-1;Parent=Msa0235720;Name=Msa0235720-mRNA-1;_AED=0.07;_eAED=0.07;_QI=149|1|1|1|0.8|0.66|6|316|608 |
| chr2_2 | exon | 8581751 | 8582081 | 8581751 | ID=Msa0235720-mRNA-1:exon:3745;Parent=Msa0235720-mRNA-1 |
| chr2_2 | exon | 8582571 | 8582750 | 8582571 | ID=Msa0235720-mRNA-1:exon:3744;Parent=Msa0235720-mRNA-1 |
| chr2_2 | exon | 8582834 | 8583007 | 8582834 | ID=Msa0235720-mRNA-1:exon:3743;Parent=Msa0235720-mRNA-1 |
| chr2_2 | exon | 8583135 | 8584246 | 8583135 | ID=Msa0235720-mRNA-1:exon:3742;Parent=Msa0235720-mRNA-1 |
| chr2_2 | exon | 8585808 | 8586288 | 8585808 | ID=Msa0235720-mRNA-1:exon:3741;Parent=Msa0235720-mRNA-1 |
| chr2_2 | exon | 8586312 | 8586325 | 8586312 | ID=Msa0235720-mRNA-1:exon:3740;Parent=Msa0235720-mRNA-1 |
| chr2_2 | five_prime_UTR | 8586312 | 8586325 | 8586312 | ID=Msa0235720-mRNA-1:five_prime_utr;Parent=Msa0235720-mRNA-1 |
| chr2_2 | five_prime_UTR | 8586154 | 8586288 | 8586154 | ID=Msa0235720-mRNA-1:five_prime_utr;Parent=Msa0235720-mRNA-1 |
| chr2_2 | CDS | 8585808 | 8586153 | 8585808 | ID=Msa0235720-mRNA-1:cds;Parent=Msa0235720-mRNA-1 |
| chr2_2 | CDS | 8583135 | 8584246 | 8583135 | ID=Msa0235720-mRNA-1:cds;Parent=Msa0235720-mRNA-1 |
| chr2_2 | CDS | 8582834 | 8583007 | 8582834 | ID=Msa0235720-mRNA-1:cds;Parent=Msa0235720-mRNA-1 |
| chr2_2 | CDS | 8582571 | 8582750 | 8582571 | ID=Msa0235720-mRNA-1:cds;Parent=Msa0235720-mRNA-1 |
| chr2_2 | CDS | 8582067 | 8582081 | 8582067 | ID=Msa0235720-mRNA-1:cds;Parent=Msa0235720-mRNA-1 |
| chr2_2 | three_prime_UTR | 8581751 | 8582066 | 8581751 | ID=Msa0235720-mRNA-1:three_prime_utr;Parent=Msa0235720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
