AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0331870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0331870 MtrunA17_Chr2g0333621 94.322 317 14 4 1 315 1 315 0.0 583
Msa0331870 MtrunA17_Chr2g0333641 79.808 312 55 6 1 310 1 306 6.87e-171 476
Msa0331870 MtrunA17_Chr4g0002801 45.584 351 130 13 1 311 1 330 5.76e-81 248
Msa0331870 MtrunA17_Chr4g0002781 45.125 359 139 12 1 311 1 349 1.11e-80 248
Msa0331870 MtrunA17_Chr8g0336681 50.204 245 112 5 77 314 97 338 1.02e-62 202
Msa0331870 MtrunA17_Chr5g0400661 40.777 309 132 13 42 311 38 334 7.56e-52 174
Msa0331870 MtrunA17_Chr5g0400621 43.590 234 114 6 82 307 102 325 5.41e-50 169
Msa0331870 MtrunA17_Chr7g0249811 36.648 352 158 9 1 311 1 328 3.87e-49 167
Msa0331870 MtrunA17_Chr2g0333611 45.274 201 93 4 120 313 27 217 7.04e-48 160
Msa0331870 MtrunA17_Chr4g0054561 48.187 193 91 4 121 310 138 324 1.20e-47 162
Msa0331870 MtrunA17_Chr2g0280161 50.282 177 82 3 134 307 173 346 3.49e-44 154
Msa0331870 MtrunA17_Chr4g0049331 42.381 210 108 5 108 310 103 306 7.71e-43 149
Msa0331870 MtrunA17_Chr2g0333541 37.627 295 146 8 20 307 1 264 9.75e-43 148
Msa0331870 MtrunA17_Chr4g0033291 36.981 265 149 5 59 315 74 328 1.12e-42 149
Msa0331870 MtrunA17_Chr4g0033391 38.735 253 136 6 59 311 83 316 2.12e-42 149
Msa0331870 MtrunA17_Chr4g0054551 45.596 193 96 4 121 310 138 324 2.42e-42 149
Msa0331870 MtrunA17_Chr4g0054581 39.382 259 130 6 82 315 122 378 6.44e-42 149
Msa0331870 MtrunA17_Chr2g0307131 39.004 241 133 5 82 315 122 355 1.64e-41 147
Msa0331870 MtrunA17_Chr6g0468491 39.847 261 141 8 59 315 65 313 3.40e-41 145
Msa0331870 MtrunA17_Chr4g0054571 34.688 320 187 6 1 313 27 331 8.36e-41 145
Msa0331870 MtrunA17_Chr7g0233441 52.349 149 56 3 161 307 57 192 3.13e-40 139
Msa0331870 MtrunA17_Chr5g0400671 37.349 249 137 6 70 311 87 323 4.33e-39 140
Msa0331870 MtrunA17_Chr2g0307141 42.778 180 98 3 138 315 183 359 9.20e-39 140
Msa0331870 MtrunA17_Chr4g0033281 36.759 253 147 4 59 311 82 321 5.61e-36 132
Msa0331870 MtrunA17_Chr7g0225901 43.429 175 90 4 121 291 71 240 1.08e-35 129
Msa0331870 MtrunA17_Chr4g0002851 49.664 149 52 3 161 307 65 192 1.30e-35 127
Msa0331870 MtrunA17_Chr4g0002831 44.848 165 74 5 149 310 53 203 2.82e-33 121
Msa0331870 MtrunA17_Chr4g0054621 33.333 216 120 3 105 315 145 341 4.10e-32 122
Msa0331870 MtrunA17_Chr5g0400641 42.138 159 87 3 141 297 1 156 4.30e-31 114
Msa0331870 MtrunA17_Chr6g0468461 35.111 225 118 5 68 291 114 311 1.94e-25 104
Msa0331870 MtrunA17_Chr8g0368371 37.419 155 76 5 20 167 1 141 5.54e-17 76.6
Msa0331870 MtrunA17_Chr8g0346161 24.444 225 134 5 53 275 238 428 5.51e-16 78.2
Msa0331870 MtrunA17_Chr1g0185621 27.473 182 119 3 103 272 436 616 2.58e-15 76.6
Msa0331870 MtrunA17_Chr5g0411341 27.848 237 137 6 67 275 410 640 5.19e-15 75.5
Msa0331870 MtrunA17_Chr8g0366751 26.190 252 161 6 46 275 361 609 6.46e-15 75.5
Msa0331870 MtrunA17_Chr7g0275821 37.168 113 62 3 137 249 251 354 1.55e-13 70.9
Msa0331870 MtrunA17_Chr8g0346151 23.529 153 113 2 127 275 267 419 2.75e-13 70.1
Msa0331870 MtrunA17_Chr8g0386921 27.604 192 109 6 102 268 375 561 1.28e-12 68.2
Msa0331870 MtrunA17_Chr1g0211081 26.047 215 125 5 90 275 272 481 4.97e-12 66.6
Msa0331870 MtrunA17_Chr7g0260841 29.586 169 96 4 30 194 263 412 5.93e-12 66.2
Msa0331870 MtrunA17_Chr3g0131691 29.630 162 102 4 123 275 286 444 9.89e-12 65.5
Msa0331870 MtrunA17_Chr2g0298751 27.389 157 102 3 139 283 53 209 5.28e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0331870 AT4G37850.2 34.161 322 183 9 6 313 21 327 5.03e-44 153
Msa0331870 AT4G37850.1 34.161 322 183 9 6 313 21 327 5.03e-44 153
Msa0331870 AT2G22760.1 41.799 189 91 5 130 307 111 291 1.75e-37 135
Msa0331870 AT2G22750.2 38.494 239 131 7 78 306 65 297 1.12e-35 131
Msa0331870 AT2G22750.3 38.494 239 131 7 78 306 93 325 1.38e-35 131
Msa0331870 AT2G22750.5 38.494 239 131 7 78 306 89 321 1.42e-35 131
Msa0331870 AT2G22750.1 38.494 239 130 8 78 306 65 296 2.95e-34 127
Msa0331870 AT2G22760.2 43.023 172 80 4 130 291 111 274 3.44e-34 126
Msa0331870 AT2G22750.4 38.494 239 130 8 78 306 93 324 3.51e-34 127
Msa0331870 AT2G22770.1 36.607 224 113 4 116 310 95 318 6.38e-32 121
Msa0331870 AT4G09820.1 34.483 145 74 1 128 272 353 476 4.52e-18 85.1
Msa0331870 AT4G17880.1 28.571 217 140 6 63 275 347 552 6.13e-17 81.6
Msa0331870 AT5G46760.1 26.860 242 164 6 41 275 320 555 6.39e-15 75.9
Msa0331870 AT1G63650.3 31.333 150 82 4 138 268 405 552 8.38e-15 75.5
Msa0331870 AT1G63650.1 31.333 150 82 4 138 268 405 552 8.38e-15 75.5
Msa0331870 AT1G63650.2 31.333 150 82 4 138 268 405 552 8.38e-15 75.5
Msa0331870 AT3G61950.6 32.877 146 81 4 134 270 124 261 1.37e-14 73.6
Msa0331870 AT3G61950.3 32.877 146 81 4 134 270 175 312 1.79e-14 73.6
Msa0331870 AT3G61950.2 32.877 146 81 4 134 270 124 261 2.34e-14 72.8
Msa0331870 AT3G61950.1 32.877 146 81 4 134 270 175 312 3.17e-14 72.8
Msa0331870 AT1G32640.1 30.519 154 98 5 127 275 440 589 8.92e-14 72.4
Msa0331870 AT2G46510.1 46.575 73 38 1 121 192 377 449 1.07e-13 72.0
Msa0331870 AT5G41315.2 30.065 153 85 3 138 268 449 601 3.85e-13 70.5
Msa0331870 AT5G41315.1 30.065 153 85 3 138 268 441 593 4.24e-13 70.1
Msa0331870 AT5G41315.3 30.065 153 85 3 138 268 446 598 4.70e-13 70.1
Msa0331870 AT1G12860.2 31.410 156 90 5 139 283 268 417 4.57e-12 66.6
Msa0331870 AT1G12860.1 31.410 156 90 5 139 283 268 417 5.09e-12 66.6
Msa0331870 AT2G16910.1 28.804 184 101 6 139 301 315 489 1.13e-11 65.9
Msa0331870 AT1G01260.1 34.653 101 64 2 127 225 421 521 1.18e-11 65.9
Msa0331870 AT1G01260.2 34.653 101 64 2 127 225 421 521 1.18e-11 65.9
Msa0331870 AT1G01260.3 34.653 101 64 2 127 225 421 521 1.18e-11 65.9
Msa0331870 AT3G26744.1 30.573 157 94 5 139 283 308 461 1.57e-11 65.5
Msa0331870 AT3G26744.4 30.573 157 94 5 139 283 308 461 1.57e-11 65.5
Msa0331870 AT3G26744.2 30.573 157 94 5 139 283 308 461 1.57e-11 65.5
Msa0331870 AT3G26744.6 30.573 157 94 5 139 283 308 461 1.58e-11 65.1
Msa0331870 AT4G16430.1 42.424 66 37 1 127 191 308 373 7.57e-11 63.2

Find 84 sgRNAs with CRISPR-Local

Find 257 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTACTTCTTGTTCTGATTC+TGG 0.178025 2_4:+47946131 None:intergenic
CAGCAACCTGTTACATATTC+TGG 0.210205 2_4:-47946293 Msa0331870:CDS
AAATGTGGGCTTCGGTTTAA+AGG 0.229301 2_4:-47941854 Msa0331870:three_prime_UTR
GAACGAAACATAATCATAAT+TGG 0.254917 2_4:+47941758 None:intergenic
GCCAGCAGTGTATTTCCTTT+TGG 0.257466 2_4:-47943761 Msa0331870:CDS
TGGAGCAATCATGGGAAAAT+TGG 0.268938 2_4:-47946584 Msa0331870:CDS
ATGCTATACCGGCCACATAT+TGG 0.272495 2_4:-47946870 Msa0331870:five_prime_UTR
TTACTTCTACTCTTTGTTCT+TGG 0.277856 2_4:+47946110 None:intergenic
TGCTATACCGGCCACATATT+GGG 0.312126 2_4:-47946869 Msa0331870:five_prime_UTR
TTCTGAGGTATTGTTTGCTT+TGG 0.319812 2_4:-47941714 Msa0331870:three_prime_UTR
GCACTTTCAGCTACTATTCC+TGG 0.324686 2_4:-47945954 Msa0331870:CDS
TCAGTGTTTGGATCACATTA+TGG 0.344284 2_4:-47946018 Msa0331870:CDS
TATTGGGCCGACCAATTGTT+TGG 0.363662 2_4:-47946853 Msa0331870:five_prime_UTR
TAGAAGTGGTTCTCAGTGTT+TGG 0.364117 2_4:-47946030 Msa0331870:CDS
ATCCACTGTGAGAAGGAAAA+TGG 0.369029 2_4:-47943836 Msa0331870:CDS
AATACTCTTGCTTTAACATC+AGG 0.372630 2_4:+47943881 None:intergenic
TTCTTCTCATGGAGCAATCA+TGG 0.379874 2_4:-47946593 Msa0331870:exon
AAGTAATAATAAGAGGAGTT+TGG 0.391916 2_4:-47946093 Msa0331870:CDS
TGGCTTCACTATTGTTGCTC+AGG 0.404693 2_4:-47943726 Msa0331870:intron
AAAATTTGAAATGTGGGCTT+CGG 0.414230 2_4:-47941862 Msa0331870:three_prime_UTR
CTGCTTCCAGAATATGTAAC+AGG 0.414669 2_4:+47946287 None:intergenic
CAGAACATGTTGCATATTTG+AGG 0.415633 2_4:+47941732 None:intergenic
GGAAAATTGGCCTCTTCATT+CGG 0.420212 2_4:-47946571 Msa0331870:intron
AGAGTAGAAGTAATAATAAG+AGG 0.424376 2_4:-47946100 Msa0331870:CDS
ATAAATGCAATGTATCATAA+TGG 0.427526 2_4:+47946743 None:intergenic
TGTAGTAGTAGCTGGTATTA+TGG 0.433106 2_4:+47946154 None:intergenic
GGACCGCATTGCCAAACAAT+TGG 0.447429 2_4:+47946842 None:intergenic
AAATGACACAAATTCTGATC+AGG 0.450921 2_4:-47943927 Msa0331870:CDS
TTCTACTCTTCTTTCCACTT+TGG 0.465419 2_4:+47946048 None:intergenic
GATTCTGGTGTAGTAGTAGC+TGG 0.465607 2_4:+47946146 None:intergenic
ATTATTACCTTCTTCAAGCC+AGG 0.465921 2_4:+47945936 None:intergenic
AGAACGTGTGAAGGAGTTAG+AGG 0.469057 2_4:-47944023 Msa0331870:CDS
TTAACATCAGGGAGTGATGA+TGG 0.473088 2_4:+47943893 None:intergenic
AAGGAGAGAATGAATGTCCT+TGG 0.473742 2_4:+47946188 None:intergenic
CTGTGATGTGTCGACTTCAC+TGG 0.474191 2_4:+47946629 None:intergenic
ATCAGAATTTGTGTCATTTG+AGG 0.475191 2_4:+47943931 None:intergenic
CACATTGTATAATGCTATAC+CGG 0.495844 2_4:-47946881 Msa0331870:five_prime_UTR
CAGTCGAAAGTAATTAATGT+TGG 0.504997 2_4:-47946714 Msa0331870:five_prime_UTR
GATTGCTTCACCAAGTATAG+AGG 0.505445 2_4:+47944066 None:intergenic
CTGTTACATATTCTGGAAGC+AGG 0.506427 2_4:-47946286 Msa0331870:CDS
AGCAATTGCTTCTGAATATG+AGG 0.510804 2_4:-47942124 Msa0331870:CDS
TGATGTTAAAGCAAGAGTAT+TGG 0.512297 2_4:-47943879 Msa0331870:CDS
TACTATTCCTGGCTTGAAGA+AGG 0.517604 2_4:-47945943 Msa0331870:intron
CAAAATGAAGGTGAATGATC+TGG 0.518407 2_4:-47942159 Msa0331870:CDS
TCACTGGATGAATGAAGCTA+AGG 0.521863 2_4:+47946645 None:intergenic
CCAAGAGTTGAATTCCCAAA+AGG 0.521924 2_4:+47943746 None:intergenic
GTTATCATCTTCTAGTGAGA+TGG 0.524407 2_4:-47946264 Msa0331870:CDS
CACTGGATGAATGAAGCTAA+GGG 0.525945 2_4:+47946646 None:intergenic
TCTTCTCATGGAGCAATCAT+GGG 0.526288 2_4:-47946592 Msa0331870:exon
CAATTGGTCGGCCCAATATG+TGG 0.532098 2_4:+47946858 None:intergenic
ATGGACGGCTCAGATAGCTC+AGG 0.532196 2_4:-47946245 Msa0331870:CDS
CCCAAAAGGAAATACACTGC+TGG 0.556531 2_4:+47943760 None:intergenic
CTTCTGAATATGAGGAGTTG+AGG 0.558111 2_4:-47942116 Msa0331870:exon
ATGGACAAGACCTCTATACT+TGG 0.562754 2_4:-47944076 Msa0331870:CDS
AGAATTTGTGTCATTTGAGG+TGG 0.563133 2_4:+47943934 None:intergenic
AGTGGAAAGAAGAGTAGAAG+TGG 0.563816 2_4:-47946044 Msa0331870:CDS
CGCATTGCCAAACAATTGGT+CGG 0.569552 2_4:+47946846 None:intergenic
TGGTCGGCCCAATATGTGGC+CGG 0.576659 2_4:+47946862 None:intergenic
TATTATGGTTGATTTATCAA+AGG 0.577249 2_4:+47946169 None:intergenic
CGACCAATTGTTTGGCAATG+CGG 0.578002 2_4:-47946845 Msa0331870:five_prime_UTR
ACATGTTGCATATTTGAGGA+TGG 0.580754 2_4:+47941736 None:intergenic
CATTGAGATCCACTGTGAGA+AGG 0.587275 2_4:-47943843 Msa0331870:CDS
GCAAAAGCTAGTAACCAAAG+TGG 0.590525 2_4:-47946062 Msa0331870:CDS
GGAGTGGACGGTGTTGATGA+AGG 0.594219 2_4:+47946209 None:intergenic
TCCGTACTAGTGTATCAAGC+AGG 0.597233 2_4:-47942079 Msa0331870:three_prime_UTR
GTTGATGTAGAGAATATGCA+AGG 0.598569 2_4:-47946377 Msa0331870:CDS
AGTTAGAGGAACGGAACAAG+AGG 0.599418 2_4:-47944009 Msa0331870:CDS
GAGAATGAATGTCCTTGGAG+TGG 0.602643 2_4:+47946193 None:intergenic
ATTCAGAAGCAATTGCTGCA+TGG 0.604569 2_4:+47942130 None:intergenic
CAAATATGCAACATGTTCTG+AGG 0.605227 2_4:-47941729 Msa0331870:three_prime_UTR
GCCTGCTTGATACACTAGTA+CGG 0.607393 2_4:+47942078 None:intergenic
GGGTGACGAGTACAAAATGA+AGG 0.610842 2_4:-47942171 Msa0331870:CDS
ATACTCTTGCTTTAACATCA+GGG 0.612633 2_4:+47943882 None:intergenic
CTTGATACACTAGTACGGAT+CGG 0.613872 2_4:+47942083 None:intergenic
CTGGATGAATGAAGCTAAGG+GGG 0.614573 2_4:+47946648 None:intergenic
AGTGTTATTACCGAATGAAG+AGG 0.617526 2_4:+47946561 None:intergenic
CATCAACACCGTCCACTCCA+AGG 0.620000 2_4:-47946205 Msa0331870:CDS
ATGAATGTCCTTGGAGTGGA+CGG 0.625719 2_4:+47946197 None:intergenic
ACTACTTCAAGAACGTGTGA+AGG 0.641075 2_4:-47944032 Msa0331870:CDS
TCATCTTCTAGTGAGATGGA+CGG 0.664945 2_4:-47946260 Msa0331870:CDS
TGGACGGCTCAGATAGCTCA+GGG 0.674267 2_4:-47946244 Msa0331870:CDS
ACTGGATGAATGAAGCTAAG+GGG 0.674304 2_4:+47946647 None:intergenic
GTGTGAAGGAGTTAGAGGAA+CGG 0.690708 2_4:-47944018 Msa0331870:CDS
TTGATGTAGAGAATATGCAA+GGG 0.725229 2_4:-47946376 Msa0331870:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATTCAAAAATTAAATCA+GGG + chr2_4:47942133-47942152 None:intergenic 10.0%
!! TGTTTACTAAAAATAAATAA+AGG - chr2_4:47944096-47944115 Msa0331870:intron 10.0%
!!! TTAGTTCTTTTTTTTTTTTT+TGG + chr2_4:47944383-47944402 None:intergenic 10.0%
!! ATATATATGTATATATAGTA+AGG + chr2_4:47945685-47945704 None:intergenic 10.0%
!!! ATTTTATTTTAGTTAAACTA+AGG - chr2_4:47945710-47945729 Msa0331870:intron 10.0%
!!! AATTATTTTCTTTTTTATTG+TGG + chr2_4:47945785-47945804 None:intergenic 10.0%
!!! AATAATAATTTTTAATGAGA+TGG - chr2_4:47945888-47945907 Msa0331870:intron 10.0%
!!! ATAATAATTTTTAATGAGAT+GGG - chr2_4:47945889-47945908 Msa0331870:intron 10.0%
!!! ATTATTTTAGATTAAAAAGA+TGG + chr2_4:47946557-47946576 None:intergenic 10.0%
!!! ATCTTTTTAATCTAAAATAA+TGG - chr2_4:47946556-47946575 Msa0331870:intron 10.0%
!!! TTTCAAATTTTTACATAAAA+AGG + chr2_4:47946683-47946702 None:intergenic 10.0%
!! AAAAACAATTATTGTAATTG+TGG + chr2_4:47941736-47941755 None:intergenic 15.0%
!! GTTAATTCAAAAATTAAATC+AGG + chr2_4:47942134-47942153 None:intergenic 15.0%
!! TTAACTGTTATTATTACAAT+AGG - chr2_4:47942149-47942168 Msa0331870:CDS 15.0%
!!! TAATAACACAAATACAATTT+TGG + chr2_4:47942847-47942866 None:intergenic 15.0%
!!! ATAAGCAAATTTAACTTTTT+AGG + chr2_4:47943520-47943539 None:intergenic 15.0%
!!! GAATAATTTTGTTTTTTTGA+AGG - chr2_4:47943882-47943901 Msa0331870:CDS 15.0%
!! TACTAAAAATAAATAAAGGA+TGG - chr2_4:47944100-47944119 Msa0331870:intron 15.0%
!! TATTTAATAATTAAATGGGA+TGG + chr2_4:47944922-47944941 None:intergenic 15.0%
!!! CTAAAACAAATTTTTAAATG+AGG + chr2_4:47945156-47945175 None:intergenic 15.0%
!! TGATAAATAGCATTTATTAA+CGG - chr2_4:47945489-47945508 Msa0331870:intron 15.0%
!!! TTTTATTTTTTGTTGATAAG+TGG + chr2_4:47945753-47945772 None:intergenic 15.0%
!!! AATTTATTTTTTACACATTG+TGG + chr2_4:47945976-47945995 None:intergenic 15.0%
!!! TTATGTAAAAATTTGAAATG+TGG - chr2_4:47946685-47946704 Msa0331870:five_prime_UTR 15.0%
!!! TATGTAAAAATTTGAAATGT+GGG - chr2_4:47946686-47946705 Msa0331870:five_prime_UTR 15.0%
!! ATAAATGCAATGTATCATAA+TGG + chr2_4:47941814-47941833 None:intergenic 20.0%
!! TTGTTGATCATAATGATTTA+CGG + chr2_4:47942073-47942092 None:intergenic 20.0%
!!! TATTATGGTTGATTTATCAA+AGG + chr2_4:47942388-47942407 None:intergenic 20.0%
!! TTATCAAATAACCTAGAAAT+TGG - chr2_4:47942728-47942747 Msa0331870:intron 20.0%
!! AAATTCACTTAGGATAAATT+AGG - chr2_4:47942751-47942770 Msa0331870:intron 20.0%
!!! GTGATTTTCTTAATTACTAA+TGG + chr2_4:47943362-47943381 None:intergenic 20.0%
!!! AGTCAAATTTGCTTATATTT+AGG + chr2_4:47943427-47943446 None:intergenic 20.0%
!! ATACTCTATATTATTACAAG+TGG - chr2_4:47943833-47943852 Msa0331870:CDS 20.0%
!!! TTTTATTTTTTCACTACGTA+TGG + chr2_4:47943948-47943967 None:intergenic 20.0%
!! AATAAAAATTGATGTTCTGT+CGG - chr2_4:47943976-47943995 Msa0331870:CDS 20.0%
!!! ATATTGACTTCTTTTCTTTT+GGG - chr2_4:47944329-47944348 Msa0331870:intron 20.0%
!! TGCATAAATTAATTGATAGA+TGG - chr2_4:47944459-47944478 Msa0331870:intron 20.0%
!!! TTTTCTTTTTTTACAAGTTG+TGG + chr2_4:47946004-47946023 None:intergenic 20.0%
!!! TTTGTTTTCAGTTTAGAAAT+AGG - chr2_4:47946756-47946775 Msa0331870:five_prime_UTR 20.0%
!!! ACAAAATGTCTTTTATAAAG+AGG + chr2_4:47946879-47946898 None:intergenic 20.0%
! GTTATTATTACAATAGGAAG+TGG - chr2_4:47942155-47942174 Msa0331870:CDS 25.0%
! AGAGTAGAAGTAATAATAAG+AGG - chr2_4:47942454-47942473 Msa0331870:intron 25.0%
! AAGTAATAATAAGAGGAGTT+TGG - chr2_4:47942461-47942480 Msa0331870:intron 25.0%
! TAAGTGAATTTCCAATTTCT+AGG + chr2_4:47942742-47942761 None:intergenic 25.0%
! TAGAAATTGGAAATTCACTT+AGG - chr2_4:47942741-47942760 Msa0331870:intron 25.0%
!! TACTAAAATGTCCTTTTACA+TGG + chr2_4:47942927-47942946 None:intergenic 25.0%
! ATGTGAAAAATAGTGTTTGA+TGG - chr2_4:47942958-47942977 Msa0331870:intron 25.0%
! TGTGAAAAATAGTGTTTGAT+GGG - chr2_4:47942959-47942978 Msa0331870:intron 25.0%
! TTTATTATGAACTCAGAGTT+TGG - chr2_4:47943266-47943285 Msa0331870:intron 25.0%
!! AATTTGCTTATATTTAGGAC+CGG + chr2_4:47943422-47943441 None:intergenic 25.0%
! CATTCAATTAATGATGTATG+TGG - chr2_4:47943456-47943475 Msa0331870:intron 25.0%
! CATTCAATTAATGATGTATG+TGG + chr2_4:47943456-47943475 None:intergenic 25.0%
! TCTTGAATTGGATTTGAATA+TGG + chr2_4:47943771-47943790 None:intergenic 25.0%
! TAAGACAACAAAACAAACAA+TGG - chr2_4:47944152-47944171 Msa0331870:intron 25.0%
! AAGTAAAACAACATCAAACT+TGG - chr2_4:47944187-47944206 Msa0331870:intron 25.0%
!!! GATATTGACTTCTTTTCTTT+TGG - chr2_4:47944328-47944347 Msa0331870:intron 25.0%
!! TTTTAGACTTAGAAATGTGT+TGG - chr2_4:47945170-47945189 Msa0331870:intron 25.0%
! TTTAGACTTAGAAATGTGTT+GGG - chr2_4:47945171-47945190 Msa0331870:intron 25.0%
!! AAAGTACTCTAAATCATAGT+AGG + chr2_4:47945197-47945216 None:intergenic 25.0%
!!! CTCATGATCAACTTATTTTT+AGG + chr2_4:47945275-47945294 None:intergenic 25.0%
! CGAGTAATAAAAAATTGATC+CGG - chr2_4:47945302-47945321 Msa0331870:intron 25.0%
! CAAGTTGTTTAAAAGTTCTT+CGG + chr2_4:47945376-47945395 None:intergenic 25.0%
! AGTAGATTTGATGTATTGTT+TGG - chr2_4:47945592-47945611 Msa0331870:intron 25.0%
! AAGTGGAAAGTGAATTTATT+TGG + chr2_4:47945736-47945755 None:intergenic 25.0%
!!! TATTTTTTACACATTGTGGT+TGG + chr2_4:47945972-47945991 None:intergenic 25.0%
! GAACGAAACATAATCATAAT+TGG + chr2_4:47946799-47946818 None:intergenic 25.0%
CAGTCGAAAGTAATTAATGT+TGG - chr2_4:47941840-47941859 Msa0331870:three_prime_UTR 30.0%
! CAAAACACATTTTCTTCTCA+TGG - chr2_4:47941950-47941969 Msa0331870:three_prime_UTR 30.0%
TTGATGTAGAGAATATGCAA+GGG - chr2_4:47942178-47942197 Msa0331870:intron 30.0%
TTACTTCTACTCTTTGTTCT+TGG + chr2_4:47942447-47942466 None:intergenic 30.0%
TAGGATAAATTAGGAGATTC+TGG - chr2_4:47942760-47942779 Msa0331870:intron 30.0%
! CTTTTACATGGTGTGTATAA+TGG + chr2_4:47942915-47942934 None:intergenic 30.0%
CATTATACACACCATGTAAA+AGG - chr2_4:47942913-47942932 Msa0331870:intron 30.0%
GTGAAAAATAGTGTTTGATG+GGG - chr2_4:47942960-47942979 Msa0331870:intron 30.0%
TATATGTTGACCATCATAGA+TGG + chr2_4:47943037-47943056 None:intergenic 30.0%
GATGTATGTGGTTCATATTA+TGG + chr2_4:47943483-47943502 None:intergenic 30.0%
! TTGCTTATATTTAAGACCGA+AGG - chr2_4:47943532-47943551 Msa0331870:intron 30.0%
! TGCTTATATTTAAGACCGAA+GGG - chr2_4:47943533-47943552 Msa0331870:intron 30.0%
! TTTGTTGTCAGTATCTATGA+AGG + chr2_4:47943643-47943662 None:intergenic 30.0%
TGTTCTGATGAGTTATATCT+TGG + chr2_4:47943740-47943759 None:intergenic 30.0%
AGATTTGGATTCTCTTGAAT+TGG + chr2_4:47943783-47943802 None:intergenic 30.0%
CTCTCTATCACTATAAGATT+TGG + chr2_4:47943798-47943817 None:intergenic 30.0%
!!! TGTTGTTTTACTTCTCATCT+TGG + chr2_4:47944180-47944199 None:intergenic 30.0%
!! CTTTAAGATAGTAGTAGTTG+AGG + chr2_4:47944415-47944434 None:intergenic 30.0%
!! TTGTACACAAATCACTTTTG+TGG + chr2_4:47944591-47944610 None:intergenic 30.0%
!! ATCAGAATTTGTGTCATTTG+AGG + chr2_4:47944626-47944645 None:intergenic 30.0%
AAATGACACAAATTCTGATC+AGG - chr2_4:47944627-47944646 Msa0331870:intron 30.0%
ATACTCTTGCTTTAACATCA+GGG + chr2_4:47944675-47944694 None:intergenic 30.0%
AATACTCTTGCTTTAACATC+AGG + chr2_4:47944676-47944695 None:intergenic 30.0%
! TGATGTTAAAGCAAGAGTAT+TGG - chr2_4:47944675-47944694 Msa0331870:intron 30.0%
CATTCTCTTTCTAATTGAAC+TGG - chr2_4:47944943-47944962 Msa0331870:intron 30.0%
!! GTCATTTTAAAGACAAGTAG+TGG - chr2_4:47945077-47945096 Msa0331870:intron 30.0%
! CTTTTAAACAACTTGAGAGA+CGG - chr2_4:47945381-47945400 Msa0331870:intron 30.0%
!!! TTTTCAAGTACTCTAAGTCA+TGG + chr2_4:47945419-47945438 None:intergenic 30.0%
GTACTTGAAAACTAACAAAC+AGG - chr2_4:47945428-47945447 Msa0331870:intron 30.0%
GCTAATAGTATTACAACTGA+GGG - chr2_4:47945450-47945469 Msa0331870:intron 30.0%
!! AGTGTGTCTGATTTTTGAAA+TGG - chr2_4:47945650-47945669 Msa0331870:intron 30.0%
AAAATCTTGCAAACTTTGAC+AGG - chr2_4:47945921-47945940 Msa0331870:intron 30.0%
AAGAAAAACAGAAGTTCACA+AGG - chr2_4:47946017-47946036 Msa0331870:CDS 30.0%
TTTAGGGAAGAAACAAAAAG+TGG - chr2_4:47946101-47946120 Msa0331870:CDS 30.0%
TTAGGGAAGAAACAAAAAGT+GGG - chr2_4:47946102-47946121 Msa0331870:CDS 30.0%
CTTGTTCAAAGCATACTTTA+GGG + chr2_4:47946255-47946274 None:intergenic 30.0%
TCATGTCATGTCATATTTCA+TGG + chr2_4:47946298-47946317 None:intergenic 30.0%
ATAACATGATTTCTTGCAGA+TGG - chr2_4:47946362-47946381 Msa0331870:CDS 30.0%
TAACATGATTTCTTGCAGAT+GGG - chr2_4:47946363-47946382 Msa0331870:CDS 30.0%
!! GTACAAGTTTTGTAAGAGAA+AGG - chr2_4:47946589-47946608 Msa0331870:exon 30.0%
TTTACATAAAAAGGCTGCAT+AGG + chr2_4:47946674-47946693 None:intergenic 30.0%
! AAAATTTGAAATGTGGGCTT+CGG - chr2_4:47946692-47946711 Msa0331870:five_prime_UTR 30.0%
! AGTGTTATTACCGAATGAAG+AGG + chr2_4:47941996-47942015 None:intergenic 35.0%
GTTGATGTAGAGAATATGCA+AGG - chr2_4:47942177-47942196 Msa0331870:intron 35.0%
GTTATCATCTTCTAGTGAGA+TGG - chr2_4:47942290-47942309 Msa0331870:intron 35.0%
TGTAGTAGTAGCTGGTATTA+TGG + chr2_4:47942403-47942422 None:intergenic 35.0%
TTCTACTCTTCTTTCCACTT+TGG + chr2_4:47942509-47942528 None:intergenic 35.0%
TCAGTGTTTGGATCACATTA+TGG - chr2_4:47942536-47942555 Msa0331870:intron 35.0%
ATTATTACCTTCTTCAAGCC+AGG + chr2_4:47942621-47942640 None:intergenic 35.0%
AAAAATAGTGTTTGATGGGG+TGG - chr2_4:47942963-47942982 Msa0331870:intron 35.0%
TGACACACAAATGTGATATG+TGG + chr2_4:47942994-47943013 None:intergenic 35.0%
CATATCACATTTGTGTGTCA+TGG - chr2_4:47942994-47943013 Msa0331870:intron 35.0%
AGTTAGCATAAACAAACGAG+TGG + chr2_4:47943061-47943080 None:intergenic 35.0%
ATAGTTACGAAGATGAAGCA+CGG - chr2_4:47943307-47943326 Msa0331870:intron 35.0%
ACATAATTTAGTACTCCCTC+CGG - chr2_4:47943400-47943419 Msa0331870:intron 35.0%
ACACATAGTTATACTCCCTT+CGG + chr2_4:47943551-47943570 None:intergenic 35.0%
! AAGGGAGTATAACTATGTGT+TGG - chr2_4:47943551-47943570 Msa0331870:intron 35.0%
AGTTATGCATGTTCTGATGT+TGG + chr2_4:47943607-47943626 None:intergenic 35.0%
TTGTCAGTATCTATGAAGGA+CGG + chr2_4:47943639-47943658 None:intergenic 35.0%
!!! TTTTTTCACTACGTATGGCA+TGG + chr2_4:47943943-47943962 None:intergenic 35.0%
!! AGAATTTGTGTCATTTGAGG+TGG + chr2_4:47944623-47944642 None:intergenic 35.0%
TTAGGAGTTGAACAACTTGA+GGG + chr2_4:47945257-47945276 None:intergenic 35.0%
TTTAGGAGTTGAACAACTTG+AGG + chr2_4:47945258-47945277 None:intergenic 35.0%
AATCAATCGGAAGTTATGAC+CGG + chr2_4:47945324-47945343 None:intergenic 35.0%
GGCTAATAGTATTACAACTG+AGG - chr2_4:47945449-47945468 Msa0331870:intron 35.0%
GCATTTATTAACGGTGTGTT+TGG - chr2_4:47945498-47945517 Msa0331870:intron 35.0%
! AAATAGATGAGAGAGAGTGT+GGG - chr2_4:47945546-47945565 Msa0331870:intron 35.0%
CTAACTCATCATGTTTGGTT+AGG + chr2_4:47946168-47946187 None:intergenic 35.0%
GATTGCTAACTCATCATGTT+TGG + chr2_4:47946173-47946192 None:intergenic 35.0%
CCTTGTTCAAAGCATACTTT+AGG + chr2_4:47946256-47946275 None:intergenic 35.0%
! CCTAAAGTATGCTTTGAACA+AGG - chr2_4:47946253-47946272 Msa0331870:CDS 35.0%
CATGACATGACATGATTGTA+AGG - chr2_4:47946308-47946327 Msa0331870:CDS 35.0%
CAAAATGAAGGTGAATGATC+TGG - chr2_4:47946395-47946414 Msa0331870:intron 35.0%
AGCAATTGCTTCTGAATATG+AGG - chr2_4:47946430-47946449 Msa0331870:intron 35.0%
ACATGTTGCATATTTGAGGA+TGG + chr2_4:47946821-47946840 None:intergenic 35.0%
CAGAACATGTTGCATATTTG+AGG + chr2_4:47946825-47946844 None:intergenic 35.0%
CAAATATGCAACATGTTCTG+AGG - chr2_4:47946825-47946844 Msa0331870:five_prime_UTR 35.0%
!! TTCTGAGGTATTGTTTGCTT+TGG - chr2_4:47946840-47946859 Msa0331870:five_prime_UTR 35.0%
AATGAAGCTAAGGGGGATAA+GGG + chr2_4:47941902-47941921 None:intergenic 40.0%
ACTGGATGAATGAAGCTAAG+GGG + chr2_4:47941910-47941929 None:intergenic 40.0%
CACTGGATGAATGAAGCTAA+GGG + chr2_4:47941911-47941930 None:intergenic 40.0%
TCACTGGATGAATGAAGCTA+AGG + chr2_4:47941912-47941931 None:intergenic 40.0%
TTCTTCTCATGGAGCAATCA+TGG - chr2_4:47941961-47941980 Msa0331870:three_prime_UTR 40.0%
TCTTCTCATGGAGCAATCAT+GGG - chr2_4:47941962-47941981 Msa0331870:three_prime_UTR 40.0%
TGGAGCAATCATGGGAAAAT+TGG - chr2_4:47941970-47941989 Msa0331870:three_prime_UTR 40.0%
! GGAAAATTGGCCTCTTCATT+CGG - chr2_4:47941983-47942002 Msa0331870:three_prime_UTR 40.0%
CAGCAACCTGTTACATATTC+TGG - chr2_4:47942261-47942280 Msa0331870:intron 40.0%
CTGCTTCCAGAATATGTAAC+AGG + chr2_4:47942270-47942289 None:intergenic 40.0%
! CTGTTACATATTCTGGAAGC+AGG - chr2_4:47942268-47942287 Msa0331870:intron 40.0%
TCATCTTCTAGTGAGATGGA+CGG - chr2_4:47942294-47942313 Msa0331870:intron 40.0%
AAGGAGAGAATGAATGTCCT+TGG + chr2_4:47942369-47942388 None:intergenic 40.0%
GGTACTTCTTGTTCTGATTC+TGG + chr2_4:47942426-47942445 None:intergenic 40.0%
GCAAAAGCTAGTAACCAAAG+TGG - chr2_4:47942492-47942511 Msa0331870:intron 40.0%
AGTGGAAAGAAGAGTAGAAG+TGG - chr2_4:47942510-47942529 Msa0331870:intron 40.0%
TAGAAGTGGTTCTCAGTGTT+TGG - chr2_4:47942524-47942543 Msa0331870:intron 40.0%
! TACTATTCCTGGCTTGAAGA+AGG - chr2_4:47942611-47942630 Msa0331870:intron 40.0%
! GTGTGTATAATGGAAGCATG+AGG + chr2_4:47942905-47942924 None:intergenic 40.0%
! TGCTTATATTTAGGACCGGA+GGG + chr2_4:47943418-47943437 None:intergenic 40.0%
! TTGCTTATATTTAGGACCGG+AGG + chr2_4:47943419-47943438 None:intergenic 40.0%
ATGGACAAGACCTCTATACT+TGG - chr2_4:47944478-47944497 Msa0331870:intron 40.0%
GATTGCTTCACCAAGTATAG+AGG + chr2_4:47944491-47944510 None:intergenic 40.0%
ACTACTTCAAGAACGTGTGA+AGG - chr2_4:47944522-47944541 Msa0331870:intron 40.0%
TTAACATCAGGGAGTGATGA+TGG + chr2_4:47944664-47944683 None:intergenic 40.0%
ATCCACTGTGAGAAGGAAAA+TGG - chr2_4:47944718-47944737 Msa0331870:intron 40.0%
! CCAGCAGTGTATTTCCTTTT+GGG - chr2_4:47944794-47944813 Msa0331870:intron 40.0%
CCAAGAGTTGAATTCCCAAA+AGG + chr2_4:47944811-47944830 None:intergenic 40.0%
!! CCTTTTGGGAATTCAACTCT+TGG - chr2_4:47944808-47944827 Msa0331870:intron 40.0%
! TTCCGATTGATTTATGCGAC+CGG - chr2_4:47945332-47945351 Msa0331870:intron 40.0%
GATCTATCAGACCATAACTC+CGG + chr2_4:47945354-47945373 None:intergenic 40.0%
TTTATCATCGTACGCTCCAA+GGG + chr2_4:47945476-47945495 None:intergenic 40.0%
ATTTATCATCGTACGCTCCA+AGG + chr2_4:47945477-47945496 None:intergenic 40.0%
GAAATAGATGAGAGAGAGTG+TGG - chr2_4:47945545-47945564 Msa0331870:intron 40.0%
GGAAGAAACAAAAAGTGGGT+GGG - chr2_4:47946106-47946125 Msa0331870:CDS 40.0%
GAAGAAACAAAAAGTGGGTG+GGG - chr2_4:47946107-47946126 Msa0331870:CDS 40.0%
GAAGAGAGACCCAAAATGTA+TGG + chr2_4:47946134-47946153 None:intergenic 40.0%
GTTTGGTTAGGAGAGAAAGA+GGG + chr2_4:47946156-47946175 None:intergenic 40.0%
TGTTTGGTTAGGAGAGAAAG+AGG + chr2_4:47946157-47946176 None:intergenic 40.0%
AGTTAGAGACGAGAGAGTTA+GGG + chr2_4:47946215-47946234 None:intergenic 40.0%
!! TACTTTAGGGTGTGTTTGGT+AGG + chr2_4:47946242-47946261 None:intergenic 40.0%
!! AGCATACTTTAGGGTGTGTT+TGG + chr2_4:47946246-47946265 None:intergenic 40.0%
! AAGTATGCTTTGAACAAGGC+TGG - chr2_4:47946257-47946276 Msa0331870:CDS 40.0%
ATTCAGAAGCAATTGCTGCA+TGG + chr2_4:47946427-47946446 None:intergenic 40.0%
CTTCTGAATATGAGGAGTTG+AGG - chr2_4:47946438-47946457 Msa0331870:intron 40.0%
CTTGATACACTAGTACGGAT+CGG + chr2_4:47946474-47946493 None:intergenic 40.0%
AAATGTGGGCTTCGGTTTAA+AGG - chr2_4:47946700-47946719 Msa0331870:five_prime_UTR 40.0%
ATGCTATACCGGCCACATAT+TGG - chr2_4:47941684-47941703 Msa0331870:three_prime_UTR 45.0%
TGCTATACCGGCCACATATT+GGG - chr2_4:47941685-47941704 Msa0331870:three_prime_UTR 45.0%
TATTGGGCCGACCAATTGTT+TGG - chr2_4:47941701-47941720 Msa0331870:three_prime_UTR 45.0%
CGCATTGCCAAACAATTGGT+CGG + chr2_4:47941711-47941730 None:intergenic 45.0%
CGACCAATTGTTTGGCAATG+CGG - chr2_4:47941709-47941728 Msa0331870:three_prime_UTR 45.0%
GAATGAAGCTAAGGGGGATA+AGG + chr2_4:47941903-47941922 None:intergenic 45.0%
CTGGATGAATGAAGCTAAGG+GGG + chr2_4:47941909-47941928 None:intergenic 45.0%
ATGAATGTCCTTGGAGTGGA+CGG + chr2_4:47942360-47942379 None:intergenic 45.0%
GAGAATGAATGTCCTTGGAG+TGG + chr2_4:47942364-47942383 None:intergenic 45.0%
GATTCTGGTGTAGTAGTAGC+TGG + chr2_4:47942411-47942430 None:intergenic 45.0%
GCACTTTCAGCTACTATTCC+TGG - chr2_4:47942600-47942619 Msa0331870:intron 45.0%
GATGTGTGTGCCATCTATGA+TGG - chr2_4:47943024-47943043 Msa0331870:intron 45.0%
! ACTATGTGTTGGTCTCGTGT+CGG - chr2_4:47943562-47943581 Msa0331870:intron 45.0%
ATGTCAAGATCCCGTGTCAT+TGG + chr2_4:47943715-47943734 None:intergenic 45.0%
TTCACTACGTATGGCATGGA+TGG + chr2_4:47943939-47943958 None:intergenic 45.0%
AGAACGTGTGAAGGAGTTAG+AGG - chr2_4:47944531-47944550 Msa0331870:intron 45.0%
GTGTGAAGGAGTTAGAGGAA+CGG - chr2_4:47944536-47944555 Msa0331870:intron 45.0%
AGTTAGAGGAACGGAACAAG+AGG - chr2_4:47944545-47944564 Msa0331870:intron 45.0%
CATTGAGATCCACTGTGAGA+AGG - chr2_4:47944711-47944730 Msa0331870:intron 45.0%
!!! TGCCATTTTCCTTCTCACAG+TGG + chr2_4:47944723-47944742 None:intergenic 45.0%
! GCCAGCAGTGTATTTCCTTT+TGG - chr2_4:47944793-47944812 Msa0331870:intron 45.0%
CCCAAAAGGAAATACACTGC+TGG + chr2_4:47944797-47944816 None:intergenic 45.0%
TGGCTTCACTATTGTTGCTC+AGG - chr2_4:47944828-47944847 Msa0331870:intron 45.0%
CTATTGTTGCTCAGGTACGT+AGG - chr2_4:47944836-47944855 Msa0331870:intron 45.0%
CTCCGGTCGCATAAATCAAT+CGG + chr2_4:47945337-47945356 None:intergenic 45.0%
GATTTATGCGACCGGAGTTA+TGG - chr2_4:47945340-47945359 Msa0331870:intron 45.0%
AGAAGTTCACAAGGCACACA+AGG - chr2_4:47946026-47946045 Msa0331870:CDS 45.0%
GAAGTTCACAAGGCACACAA+GGG - chr2_4:47946027-47946046 Msa0331870:CDS 45.0%
GCCATTTCTCTCCTCTTTCT+CGG - chr2_4:47946075-47946094 Msa0331870:CDS 45.0%
TCCTCTTTCTCGGCAGTTTA+GGG - chr2_4:47946085-47946104 Msa0331870:CDS 45.0%
GGGAAGAAACAAAAAGTGGG+TGG - chr2_4:47946105-47946124 Msa0331870:CDS 45.0%
GAGTTAGAGACGAGAGAGTT+AGG + chr2_4:47946216-47946235 None:intergenic 45.0%
GGGTGACGAGTACAAAATGA+AGG - chr2_4:47946383-47946402 Msa0331870:CDS 45.0%
TCCGTACTAGTGTATCAAGC+AGG - chr2_4:47946475-47946494 Msa0331870:intron 45.0%
GCCTGCTTGATACACTAGTA+CGG + chr2_4:47946479-47946498 None:intergenic 45.0%
!!! ATAATTGTTTTTTTTTTTTT+TGG - chr2_4:47941744-47941763 Msa0331870:three_prime_UTR 5.0%
!! TATTTATTATACATTAAAAA+GGG + chr2_4:47944006-47944025 None:intergenic 5.0%
!! TTATTTATTATACATTAAAA+AGG + chr2_4:47944007-47944026 None:intergenic 5.0%
!! ATGATATTTAATAATTAAAT+GGG + chr2_4:47944926-47944945 None:intergenic 5.0%
!! AATGATATTTAATAATTAAA+TGG + chr2_4:47944927-47944946 None:intergenic 5.0%
!! ACAATAAATAAATATATTTA+GGG + chr2_4:47945034-47945053 None:intergenic 5.0%
!! AACAATAAATAAATATATTT+AGG + chr2_4:47945035-47945054 None:intergenic 5.0%
CAATTGGTCGGCCCAATATG+TGG + chr2_4:47941699-47941718 None:intergenic 50.0%
GGACCGCATTGCCAAACAAT+TGG + chr2_4:47941715-47941734 None:intergenic 50.0%
!! CTGTGATGTGTCGACTTCAC+TGG + chr2_4:47941928-47941947 None:intergenic 50.0%
CGAAGATGAAGCACGGATAC+AGG - chr2_4:47943314-47943333 Msa0331870:intron 50.0%
ATGAAGCACGGATACAGGCA+CGG - chr2_4:47943319-47943338 Msa0331870:intron 50.0%
GTATTACAACTGAGGGCCCT+TGG - chr2_4:47945457-47945476 Msa0331870:intron 50.0%
GACAGGTTCATTCGCAATGC+TGG - chr2_4:47945938-47945957 Msa0331870:intron 50.0%
!! AAGGCACACAAGGGTATTGC+TGG - chr2_4:47946036-47946055 Msa0331870:CDS 50.0%
GCCGAGAAAGAGGAGAGAAA+TGG + chr2_4:47946079-47946098 None:intergenic 50.0%
CTCCTCTTTCTCGGCAGTTT+AGG - chr2_4:47946084-47946103 Msa0331870:CDS 50.0%
TCCCTAAACTGCCGAGAAAG+AGG + chr2_4:47946089-47946108 None:intergenic 50.0%
! TGGGTGGGGTCCATACATTT+TGG - chr2_4:47946121-47946140 Msa0331870:CDS 50.0%
! GGGTGGGGTCCATACATTTT+GGG - chr2_4:47946122-47946141 Msa0331870:CDS 50.0%
TAGAGACGAGAGAGTTAGGG+AGG + chr2_4:47946212-47946231 None:intergenic 50.0%
!! CTAGTACGGATCGGTTTTGC+TGG + chr2_4:47946465-47946484 None:intergenic 50.0%
ATGGACGGCTCAGATAGCTC+AGG - chr2_4:47942309-47942328 Msa0331870:intron 55.0%
TGGACGGCTCAGATAGCTCA+GGG - chr2_4:47942310-47942329 Msa0331870:intron 55.0%
!! GGAGTGGACGGTGTTGATGA+AGG + chr2_4:47942348-47942367 None:intergenic 55.0%
CATCAACACCGTCCACTCCA+AGG - chr2_4:47942349-47942368 Msa0331870:intron 55.0%
! TGTTGGTCTCGTGTCGGTGT+CGG - chr2_4:47943568-47943587 Msa0331870:intron 55.0%
CACTTGTGATGAGCAGCGAG+CGG - chr2_4:47943684-47943703 Msa0331870:intron 55.0%
TGGTCGGCCCAATATGTGGC+CGG + chr2_4:47941695-47941714 None:intergenic 60.0%
!! GAGCGGTGCTGCCAATGACA+CGG - chr2_4:47943701-47943720 Msa0331870:intron 60.0%
!! AGCGGTGCTGCCAATGACAC+GGG - chr2_4:47943702-47943721 Msa0331870:intron 60.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 47941676 47946900 47941676 ID=Msa0331870;Name=Msa0331870
chr2_4 mRNA 47941676 47946900 47941676 ID=Msa0331870-mRNA-1;Parent=Msa0331870;Name=Msa0331870-mRNA-1;_AED=0.36;_eAED=0.36;_QI=293|1|1|1|1|1|4|442|315
chr2_4 exon 47941676 47942195 47941676 ID=Msa0331870-mRNA-1:exon:14489;Parent=Msa0331870-mRNA-1
chr2_4 exon 47943727 47944098 47943727 ID=Msa0331870-mRNA-1:exon:14488;Parent=Msa0331870-mRNA-1
chr2_4 exon 47945944 47946405 47945944 ID=Msa0331870-mRNA-1:exon:14487;Parent=Msa0331870-mRNA-1
chr2_4 exon 47946572 47946900 47946572 ID=Msa0331870-mRNA-1:exon:14486;Parent=Msa0331870-mRNA-1
chr2_4 five_prime_UTR 47946608 47946900 47946608 ID=Msa0331870-mRNA-1:five_prime_utr;Parent=Msa0331870-mRNA-1
chr2_4 CDS 47946572 47946607 47946572 ID=Msa0331870-mRNA-1:cds;Parent=Msa0331870-mRNA-1
chr2_4 CDS 47945944 47946405 47945944 ID=Msa0331870-mRNA-1:cds;Parent=Msa0331870-mRNA-1
chr2_4 CDS 47943727 47944098 47943727 ID=Msa0331870-mRNA-1:cds;Parent=Msa0331870-mRNA-1
chr2_4 CDS 47942118 47942195 47942118 ID=Msa0331870-mRNA-1:cds;Parent=Msa0331870-mRNA-1
chr2_4 three_prime_UTR 47941676 47942117 47941676 ID=Msa0331870-mRNA-1:three_prime_utr;Parent=Msa0331870-mRNA-1
Gene Sequence

>Msa0331870

ATGGAGCAATCATGGGAAAATTGGCCTCTTCATTCGGAAGTGGTTGATGTAGAGAATATGCAAGGGCAATATTGTCATCAAACAAGTATTGATGATGAAGAAGAGTTCTTGAGAGACATAATTCTTCAGCAACCTGTTACATATTCTGGAAGCAGGTTATCATCTTCTAGTGAGATGGACGGCTCAGATAGCTCAGGGAAAAAGCTTCATCCTTCATCAACACCGTCCACTCCAAGGACATTCATTCTCTCCTTTGATAAATCAACCATAATACCAGCTACTACTACACCAGAATCAGAACAAGAAGTACCAAGAACAAAGAGTAGAAGTAATAATAAGAGGAGTTTGGAAACAAAAGCAAAAGCTAGTAACCAAAGTGGAAAGAAGAGTAGAAGTGGTTCTCAGTGTTTGGATCACATTATGGCTGAGAGAAAAAGAAGACTAGAACTATCACAGAAGTTCATTGCACTTTCAGCTACTATTCCTGGCTTGAAGAAGATGGACAAGACCTCTATACTTGGTGAAGCAATCAATTATGTGAAACTACTTCAAGAACGTGTGAAGGAGTTAGAGGAACGGAACAAGAGGAACATCGAATCAACAATAATCCACAAAAGTGATTTGTGTACAAATGAACATACCACCTCAAATGACACAAATTCTGATCAGGATTGTTGTAAACCATCATCACTCCCTGATGTTAAAGCAAGAGTATTGGAAAATGAAGTGCTCATTGAGATCCACTGTGAGAAGGAAAATGGCATTGAGATCAAAATATTGAACTTGCTTGAAAATCTTCATCTTATTGTCACTGCCAGCAGTGTATTTCCTTTTGGGAATTCAACTCTTGGCTTCACTATTGTTGCTCAGATGGGTGACGAGTACAAAATGAAGGTGAATGATCTGGTGAAAACCATGCAGCAATTGCTTCTGAATATGAGGAGTTGA
Protein sequence

>Msa0331870

MEQSWENWPLHSEVVDVENMQGQYCHQTSIDDEEEFLRDIILQQPVTYSGSRLSSSSEMDGSDSSGKKLHPSSTPSTPRTFILSFDKSTIIPATTTPESEQEVPRTKSRSNNKRSLETKAKASNQSGKKSRSGSQCLDHIMAERKRRLELSQKFIALSATIPGLKKMDKTSILGEAINYVKLLQERVKELEERNKRNIESTIIHKSDLCTNEHTTSNDTNSDQDCCKPSSLPDVKARVLENEVLIEIHCEKENGIEIKILNLLENLHLIVTASSVFPFGNSTLGFTIVAQMGDEYKMKVNDLVKTMQQLLLNMRS*