AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1409360


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1409360 MtrunA17_Chr4g0069291 96.207 580 18 2 1 576 1 580 0.0 1135
Msa1409360 MtrunA17_Chr7g0269591 29.752 363 218 8 116 452 175 526 5.19e-40 156
Msa1409360 MtrunA17_Chr8g0344131 29.261 352 212 7 108 452 242 563 1.03e-33 136
Msa1409360 MtrunA17_Chr5g0395711 36.719 128 74 3 303 429 443 564 1.73e-14 77.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1409360 AT3G17470.2 69.275 524 154 3 58 574 72 595 0.0 714
Msa1409360 AT3G17470.1 69.275 524 154 3 58 574 57 580 0.0 713
Msa1409360 AT3G17470.3 68.668 383 118 1 58 438 57 439 0.0 545
Msa1409360 AT1G54130.1 32.530 332 191 7 108 431 234 540 4.33e-38 150
Msa1409360 AT3G14050.1 32.530 332 190 9 109 431 230 536 6.48e-37 146
Msa1409360 AT4G02260.3 29.969 327 199 7 116 423 177 492 8.91e-37 146
Msa1409360 AT4G02260.4 29.787 329 201 7 116 425 177 494 1.09e-36 146
Msa1409360 AT4G02260.2 29.787 329 201 7 116 425 177 494 1.27e-36 146
Msa1409360 AT4G02260.1 29.697 330 201 8 116 425 177 495 4.16e-35 141

Find 165 sgRNAs with CRISPR-Local

Find 230 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCACTTGGAAAATCTTTA+AGG 0.162251 tig0023518:+78175 None:intergenic
TGACATTAGAGCTTTGATTT+TGG 0.217842 tig0023518:-79124 Msa1409360:CDS
GACCCTCAACCTATCCTTAA+AGG 0.231562 tig0023518:-77466 Msa1409360:three_prime_UTR
GCCTTCCACGAATATCTTAT+AGG 0.237824 tig0023518:-77514 Msa1409360:three_prime_UTR
ATCCACTAATTCCGCAAGTA+TGG 0.254255 tig0023518:+78825 None:intergenic
AGCACATCATTTACATCTTC+TGG 0.271709 tig0023518:+78730 None:intergenic
CATGCTGGCTGCAGCTGAAC+TGG 0.295606 tig0023518:-78208 Msa1409360:CDS
CATGCTTCTCGCTGATCTTC+AGG 0.298040 tig0023518:-80316 Msa1409360:intron
GCAGTGGATGTAAGTGAAAT+TGG 0.300443 tig0023518:-78535 Msa1409360:CDS
TAACTACATATCACTTGAAT+TGG 0.301558 tig0023518:-78983 Msa1409360:CDS
CAGGTATATAATAAGGAGTT+TGG 0.304931 tig0023518:-77623 Msa1409360:CDS
TTCCTCTTTACAAACGGTTC+TGG 0.309806 tig0023518:+77423 None:intergenic
TTTCCAAGTGCAAATCATAA+AGG 0.319956 tig0023518:-78165 Msa1409360:CDS
GAAGTTTCATCCACAAATAT+TGG 0.331515 tig0023518:-80767 Msa1409360:five_prime_UTR
TTTAATTCAGGTATATAATA+AGG 0.339845 tig0023518:-77630 Msa1409360:CDS
AGAGGAGAGCTTTGAAGAAC+AGG 0.345980 tig0023518:+80384 None:intergenic
GTGGATGATATCTCAGTTAA+AGG 0.351684 tig0023518:-78808 Msa1409360:CDS
TGCATCTAGAGTAGACATTC+TGG 0.356083 tig0023518:-79193 Msa1409360:CDS
TCCACATAAAGATATGAATA+AGG 0.356386 tig0023518:+78934 None:intergenic
GTTTCTTATTCAACTTTCAT+TGG 0.365023 tig0023518:+80804 None:intergenic
GGCAAATCTTATACAACAAT+TGG 0.368357 tig0023518:+77534 None:intergenic
GGATTTCTTTCCACATAGAT+TGG 0.373050 tig0023518:+78620 None:intergenic
AATGCATTATCTCCAGACTT+AGG 0.376086 tig0023518:+78685 None:intergenic
AGGTTCTGCTACTGCTCATT+TGG 0.380091 tig0023518:-79244 Msa1409360:CDS
CTGGAGAGAGAGCGTGCTAC+AGG 0.382710 tig0023518:-78657 Msa1409360:CDS
TTCCAAGTGCAAATCATAAA+GGG 0.388198 tig0023518:-78164 Msa1409360:CDS
TGGGAGGACTAGACCCTTGA+TGG 0.390942 tig0023518:-78515 Msa1409360:CDS
GATTATATTGCCAGGCCAAA+AGG 0.405490 tig0023518:-78583 Msa1409360:CDS
ACAGATAAGAACTACTGAAA+TGG 0.407491 tig0023518:-78488 Msa1409360:CDS
TGATGAATACAAGAAAATAT+TGG 0.408026 tig0023518:-77684 Msa1409360:CDS
TAAGCGGTGGTGAGTGGTAG+TGG 0.408658 tig0023518:+80608 None:intergenic
AGATGATAGTGGTTTAATTC+AGG 0.409345 tig0023518:-77642 Msa1409360:CDS
CATATCTTTATGTGGATACA+TGG 0.412806 tig0023518:-78927 Msa1409360:CDS
CGAGATGGTTCGTAATTTAG+AGG 0.415458 tig0023518:-77714 Msa1409360:CDS
AGCCAGAACCGTTTGTAAAG+AGG 0.417258 tig0023518:-77425 Msa1409360:three_prime_UTR
ACCCTCAACCTATCCTTAAA+GGG 0.428322 tig0023518:-77465 Msa1409360:three_prime_UTR
TTGAGAGAGGTGTTGGAAGT+AGG 0.431304 tig0023518:-79300 Msa1409360:CDS
GAAAGAGGAGAGCGACCATC+AGG 0.433390 tig0023518:+80357 None:intergenic
CACAATGAAGAAGCTCTTGA+AGG 0.442293 tig0023518:-78764 Msa1409360:CDS
ATGCATTATCTCCAGACTTA+GGG 0.442953 tig0023518:+78686 None:intergenic
ATGGTGGCGCGTGGGGTAAT+CGG 0.443215 tig0023518:+80647 None:intergenic
TCCCATACTTGCGGAATTAG+TGG 0.444671 tig0023518:-78827 Msa1409360:CDS
ATGATCTGCTGCTGATACCT+TGG 0.450610 tig0023518:+79057 None:intergenic
CATGGCAATGGATAAAGCTT+TGG 0.451814 tig0023518:+80335 None:intergenic
AAACACAACACCAATATTTG+TGG 0.453363 tig0023518:+80757 None:intergenic
AAGAAAACACTAACCTCCTC+TGG 0.456445 tig0023518:+78406 None:intergenic
TCCTTATTCATATCTTTATG+TGG 0.459286 tig0023518:-78935 Msa1409360:CDS
ATGTCATGTGCATCTTCTCC+TGG 0.459375 tig0023518:+78036 None:intergenic
AAAATATTCCTCTTTACAAA+CGG 0.460364 tig0023518:+77417 None:intergenic
CTTGACATGATGAGGCATCT+TGG 0.461356 tig0023518:-79087 Msa1409360:CDS
GCGTGTGCTGTAGAAGTTCC+CGG 0.463247 tig0023518:-80522 Msa1409360:CDS
TCTTATCTGTATTTCCATCA+AGG 0.463566 tig0023518:+78501 None:intergenic
TTCTCGACAAGAACGGAGAT+GGG 0.464209 tig0023518:-78107 Msa1409360:CDS
CATGAAGTTCGAAGTCAGAT+AGG 0.464988 tig0023518:-79264 Msa1409360:CDS
TGGATACAAAAGTTTGCATA+TGG 0.465288 tig0023518:-78557 Msa1409360:CDS
GAGCGACCATCAGGAGTAAG+AGG 0.466122 tig0023518:+80366 None:intergenic
GGAACTTACAGAGGTGATAG+AGG 0.467883 tig0023518:-78070 Msa1409360:CDS
CTTCATATGGCAGATGATAG+TGG 0.471188 tig0023518:-77653 Msa1409360:CDS
ATTATATTGCCAGGCCAAAA+GGG 0.474542 tig0023518:-78582 Msa1409360:CDS
GTGACGCGGGTGGGTCGAGT+GGG 0.475192 tig0023518:+80570 None:intergenic
TGCTCCTCTTGCTCATGCTG+TGG 0.479821 tig0023518:-79010 Msa1409360:CDS
ATAATAAGGAGTTTGGCAAC+AGG 0.480517 tig0023518:-77616 Msa1409360:CDS
CCCCTTTAAGGATAGGTTGA+GGG 0.481740 tig0023518:+77464 None:intergenic
GTGTTATCCACAAGTTCCTC+TGG 0.484331 tig0023518:-80438 Msa1409360:CDS
TGAATGTAATGTAATGTTGT+TGG 0.484720 tig0023518:+80723 None:intergenic
AGCTCTCCTCTTACTCCTGA+TGG 0.487226 tig0023518:-80372 Msa1409360:CDS
GGAGATAATGCATTGGAAGC+TGG 0.491096 tig0023518:-78676 Msa1409360:CDS
ACGGTGAGTTTAGGAGAGTA+TGG 0.491382 tig0023518:-80857 None:intergenic
CTTCTCGACAAGAACGGAGA+TGG 0.492481 tig0023518:-78108 Msa1409360:CDS
GGTGACGCGGGTGGGTCGAG+TGG 0.492820 tig0023518:+80569 None:intergenic
ATTGGATGAGAAACTTCATA+TGG 0.494227 tig0023518:-77666 Msa1409360:CDS
GTGGTGTTGAACCCTAAGTC+TGG 0.496487 tig0023518:-78697 Msa1409360:CDS
TGTGGAAAGAAATCCCTTCT+CGG 0.498703 tig0023518:-78612 Msa1409360:CDS
TCTCCTCTCTCTTCTTCTAG+TGG 0.501351 tig0023518:+80828 None:intergenic
CAGTGGATGTAAGTGAAATT+GGG 0.501702 tig0023518:-78534 Msa1409360:CDS
TGGTTTGTTTGAGAAGAGAA+TGG 0.502046 tig0023518:+80628 None:intergenic
GATGCAGAAGTTATATCTGC+TGG 0.508548 tig0023518:-79327 Msa1409360:CDS
TATCACCATCTTTCCTCCAC+CGG 0.511134 tig0023518:+80503 None:intergenic
ACTCGACCCACCCGCGTCAC+CGG 0.513152 tig0023518:-80567 Msa1409360:CDS
TGAGAGTAAGCGGTGGTGAG+TGG 0.513797 tig0023518:+80602 None:intergenic
GGATACATGGTTGAGAAGTC+AGG 0.514914 tig0023518:-78914 Msa1409360:CDS
ATAGAGGAGCTTGGTGCACC+AGG 0.521684 tig0023518:-78054 Msa1409360:CDS
ACGCTCTCGGAGTGGACCAC+CGG 0.522401 tig0023518:+80541 None:intergenic
CTTATCTGTATTTCCATCAA+GGG 0.524648 tig0023518:+78502 None:intergenic
CCGGAGACCGGTGACGCGGG+TGG 0.524804 tig0023518:+80560 None:intergenic
ATCCCTTTATGATTTGCACT+TGG 0.525949 tig0023518:+78162 None:intergenic
GCTCCTCTTGCTCATGCTGT+GGG 0.528069 tig0023518:-79009 Msa1409360:CDS
CAAAAGTTTGCATATGGCAG+TGG 0.532210 tig0023518:-78551 Msa1409360:CDS
CCACCCGCGTCACCGGTCTC+CGG 0.535267 tig0023518:-80560 Msa1409360:CDS
AGTTCCCGGTGGAGGAAAGA+TGG 0.535806 tig0023518:-80508 Msa1409360:CDS
ATTGCCAGGCCAAAAGGGAA+TGG 0.535893 tig0023518:-78577 Msa1409360:CDS
ATGGATAGGTTAGCTGTTGG+TGG 0.537695 tig0023518:-78469 Msa1409360:CDS
TCTCATTCATTATACAAGGC+TGG 0.539860 tig0023518:-78439 Msa1409360:CDS
AAGAAGACCAGAGGAACTTG+TGG 0.542935 tig0023518:+80431 None:intergenic
TCTCTCTTCTTCTAGTGGAG+TGG 0.543876 tig0023518:+80833 None:intergenic
CTTCTTGACTCGAACAGTGA+TGG 0.544084 tig0023518:-78006 Msa1409360:CDS
TTTCGCCTTCTCGACAAGAA+CGG 0.544865 tig0023518:-78114 Msa1409360:CDS
CATCTCCGTTCTTGTCGAGA+AGG 0.545112 tig0023518:+78109 None:intergenic
GGCATCTTGGTCACCTTCCA+AGG 0.547221 tig0023518:-79074 Msa1409360:CDS
ATGGATAAAGCTTTGGAAAG+AGG 0.547465 tig0023518:+80342 None:intergenic
TAGGTTAGCTGTTGGTGGAA+TGG 0.547704 tig0023518:-78464 Msa1409360:CDS
ACTTCTACAGCACACGCTCT+CGG 0.548640 tig0023518:+80528 None:intergenic
CGGAGTGGACCACCGGAGAC+CGG 0.548762 tig0023518:+80548 None:intergenic
GGACTAAAGATTATATTGCC+AGG 0.550792 tig0023518:-78591 Msa1409360:CDS
CTGAAATTCATCAGAGCTGA+GGG 0.550894 tig0023518:+77981 None:intergenic
GGAAGAAGAGTGAGAGTAAG+CGG 0.551427 tig0023518:+80592 None:intergenic
TCCACTAATTCCGCAAGTAT+GGG 0.553251 tig0023518:+78826 None:intergenic
GCTGTAGAAGTTCCCGGTGG+AGG 0.555769 tig0023518:-80516 Msa1409360:CDS
GAAACTTCATCTTGTCGTTG+CGG 0.556978 tig0023518:+80782 None:intergenic
TGACGCGGGTGGGTCGAGTG+GGG 0.558230 tig0023518:+80571 None:intergenic
ATCAGCGAGAAGCATGGCAA+TGG 0.559213 tig0023518:+80323 None:intergenic
ATCAAATCATCCAATCTATG+TGG 0.562146 tig0023518:-78630 Msa1409360:CDS
GAAGATGTAAATGATGTGCT+TGG 0.567130 tig0023518:-78727 Msa1409360:CDS
CTTTGAAGCTTGACATGATG+AGG 0.569527 tig0023518:-79095 Msa1409360:CDS
AGAGCTTTGAAGAACAGGAA+TGG 0.570567 tig0023518:+80389 None:intergenic
TGGAATATTGAGAGAGGTGT+TGG 0.571119 tig0023518:-79307 Msa1409360:CDS
AGTATCCTATAAGATATTCG+TGG 0.573789 tig0023518:+77509 None:intergenic
TAAGAACTACTGAAATGGAT+AGG 0.574391 tig0023518:-78483 Msa1409360:CDS
TATAATCTTTAGTCCGAGAA+GGG 0.574454 tig0023518:+78599 None:intergenic
GGCATCTCATTCATTATACA+AGG 0.575422 tig0023518:-78443 Msa1409360:CDS
GAGAAGAGAATGGTGGCGCG+TGG 0.575660 tig0023518:+80638 None:intergenic
CTCACTTAGATAATCTATTG+TGG 0.576514 tig0023518:-77488 Msa1409360:three_prime_UTR
TTCAGCTGCAGCCAGCATGA+TGG 0.579396 tig0023518:+78212 None:intergenic
AGAAGAGAATGGTGGCGCGT+GGG 0.580259 tig0023518:+80639 None:intergenic
ATCACCATCTTTCCTCCACC+GGG 0.581759 tig0023518:+80504 None:intergenic
ACCACCGGAGACCGGTGACG+CGG 0.582141 tig0023518:+80556 None:intergenic
ATGAAGAAGCTCTTGAAGGA+TGG 0.584555 tig0023518:-78760 Msa1409360:CDS
ATATAATCTTTAGTCCGAGA+AGG 0.585270 tig0023518:+78598 None:intergenic
AGAAGAGTGAGAGTAAGCGG+TGG 0.586254 tig0023518:+80595 None:intergenic
TGGTTGAGAAGTCAGGAGAC+AGG 0.587107 tig0023518:-78907 Msa1409360:CDS
ATTCCCACAGCATGAGCAAG+AGG 0.587161 tig0023518:+79006 None:intergenic
CGGAGACCGGTGACGCGGGT+GGG 0.591943 tig0023518:+80561 None:intergenic
TAAGTCTGGAGATAATGCAT+TGG 0.596696 tig0023518:-78683 Msa1409360:CDS
GCGTTTAAAGACCATCATGC+TGG 0.599824 tig0023518:-78223 Msa1409360:CDS
CCACCGGAGACCGGTGACGC+GGG 0.602844 tig0023518:+80557 None:intergenic
AGAAGCTCTTGAAGGATGGT+CGG 0.606805 tig0023518:-78756 Msa1409360:CDS
TGGAGAGAGAGCGTGCTACA+GGG 0.607107 tig0023518:-78656 Msa1409360:CDS
TCCTATAAGATATTCGTGGA+AGG 0.611103 tig0023518:+77513 None:intergenic
GAAGAGAATGGTGGCGCGTG+GGG 0.611821 tig0023518:+80640 None:intergenic
TACAGCACACGCTCTCGGAG+TGG 0.612388 tig0023518:+80533 None:intergenic
ACAGAGGTGATAGAGGAGCT+TGG 0.612835 tig0023518:-78063 Msa1409360:CDS
AAAATCTGATCCCATACTTG+CGG 0.616260 tig0023518:-78836 Msa1409360:CDS
CCCGCGTCACCGGTCTCCGG+TGG 0.617971 tig0023518:-80557 Msa1409360:CDS
CCCTCAACCTATCCTTAAAG+GGG 0.621541 tig0023518:-77464 Msa1409360:three_prime_UTR
TCTGCTGCTGATACCTTGGA+AGG 0.625070 tig0023518:+79061 None:intergenic
CTGAAGATCAGCGAGAAGCA+TGG 0.633168 tig0023518:+80317 None:intergenic
TGATTTGACTGAGAGGATGA+AGG 0.637086 tig0023518:-80460 Msa1409360:CDS
CTTTCAATGATTTGACTGAG+AGG 0.637305 tig0023518:-80467 Msa1409360:CDS
TCTGAAATTCATCAGAGCTG+AGG 0.641418 tig0023518:+77980 None:intergenic
AGATGGGAAGATAAGCATTG+AGG 0.649781 tig0023518:-78091 Msa1409360:CDS
ATCTGCTGGAATATTGAGAG+AGG 0.655258 tig0023518:-79313 Msa1409360:CDS
GGCTGGTCTTACTAATCCAG+AGG 0.657487 tig0023518:-78422 Msa1409360:CDS
AAGATGGTGATAGAGCTTGT+CGG 0.658286 tig0023518:-80492 Msa1409360:CDS
TGATGTGCTTGGACTGCGAG+TGG 0.660485 tig0023518:-78716 Msa1409360:CDS
TGGTCTTACTAATCCAGAGG+AGG 0.668643 tig0023518:-78419 Msa1409360:intron
GCGTGGGGTAATCGGAAGCG+TGG 0.673355 tig0023518:+80655 None:intergenic
TGATTTGAAAAGAAGACCAG+AGG 0.678594 tig0023518:+80422 None:intergenic
TGGATGTAAGTGAAATTGGG+AGG 0.681330 tig0023518:-78531 Msa1409360:CDS
TTTGTTTGAGAAGAGAATGG+TGG 0.686445 tig0023518:+80631 None:intergenic
AAGCATTGAGGAACTTACAG+AGG 0.688318 tig0023518:-78079 Msa1409360:CDS
ACTCCACTAGAAGAAGAGAG+AGG 0.694188 tig0023518:-80831 Msa1409360:five_prime_UTR
GAAATGGATAGGTTAGCTGT+TGG 0.706251 tig0023518:-78472 Msa1409360:CDS
TTGAGAAGTCAGGAGACAGG+TGG 0.721078 tig0023518:-78904 Msa1409360:CDS
CCTCAACCTATCCTTAAAGG+GGG 0.725183 tig0023518:-77463 Msa1409360:three_prime_UTR
TGTGCTGTAGAAGTTCCCGG+TGG 0.767826 tig0023518:-80519 Msa1409360:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTATCGTTAAAAAATTTAAT+TGG + tig0023518:78026-78045 None:intergenic 15.0%
!!! TAAGAAAATATTCCTTTTTT+AGG - tig0023518:78104-78123 Msa1409360:CDS 15.0%
!!! ATAAAAAAAGATTCCTTTTT+AGG - tig0023518:78141-78160 Msa1409360:CDS 15.0%
!!! TCTATTTGTTTTATTAGTTA+AGG + tig0023518:78413-78432 None:intergenic 15.0%
!! ATAATGTTAGATAATAGATA+TGG - tig0023518:78456-78475 Msa1409360:CDS 15.0%
!!! GCAATTGATTTTAAATAATT+TGG + tig0023518:78642-78661 None:intergenic 15.0%
!! TACTATAAAGAAACAATAAA+CGG + tig0023518:78857-78876 None:intergenic 15.0%
!! TTTAATTCAGGTATATAATA+AGG - tig0023518:80590-80609 Msa1409360:CDS 15.0%
!! ATGAAAATGAATGAAAGTAA+TGG + tig0023518:77936-77955 None:intergenic 20.0%
!! AAGTCAATAAATAGTAATCA+TGG + tig0023518:78048-78067 None:intergenic 20.0%
!!! TATTTTCTTATATTTCAGAC+CGG + tig0023518:78094-78113 None:intergenic 20.0%
!! ATTATTCAATGAACCTAAAA+AGG + tig0023518:78157-78176 None:intergenic 20.0%
!!! TATTTTCTTATATTTGAGAC+CGG - tig0023518:78240-78259 Msa1409360:intron 20.0%
!! AATATTGTGGTATACATATA+AGG - tig0023518:78267-78286 Msa1409360:intron 20.0%
!!! ATAATTGATTTTGACATGTT+TGG - tig0023518:78540-78559 Msa1409360:CDS 20.0%
!!! TGTTTTATTTTTTGATACTC+AGG - tig0023518:79970-79989 Msa1409360:intron 20.0%
!! AGTTGTACATAATTTCTTAA+TGG - tig0023518:80364-80383 Msa1409360:CDS 20.0%
!! TGATGAATACAAGAAAATAT+TGG - tig0023518:80536-80555 Msa1409360:CDS 20.0%
!! AAAATATTCCTCTTTACAAA+CGG + tig0023518:80806-80825 None:intergenic 20.0%
! GTTTCTTATTCAACTTTCAT+TGG + tig0023518:77419-77438 None:intergenic 25.0%
! TGAATGTAATGTAATGTTGT+TGG + tig0023518:77500-77519 None:intergenic 25.0%
! AACAAATAGATAAGCTTAGA+AGG - tig0023518:78423-78442 Msa1409360:CDS 25.0%
! CAAGTTAGAATCAATTATAG+AGG + tig0023518:78591-78610 None:intergenic 25.0%
!! AATTTCAGTAAGAGTTTGTT+TGG + tig0023518:78799-78818 None:intergenic 25.0%
! TAACTACATATCACTTGAAT+TGG - tig0023518:79237-79256 Msa1409360:CDS 25.0%
! TCCTTATTCATATCTTTATG+TGG - tig0023518:79285-79304 Msa1409360:CDS 25.0%
! TCCACATAAAGATATGAATA+AGG + tig0023518:79289-79308 None:intergenic 25.0%
GAAGTTTCATCCACAAATAT+TGG - tig0023518:77453-77472 Msa1409360:three_prime_UTR 30.0%
AAACACAACACCAATATTTG+TGG + tig0023518:77466-77485 None:intergenic 30.0%
! AAGTGTAAGAGTTCCATTTT+TGG + tig0023518:77545-77564 None:intergenic 30.0%
TTGAGACTTGAACCTAAAAA+AGG + tig0023518:78119-78138 None:intergenic 30.0%
CATTGAGTAGTTAATGTATG+TGG + tig0023518:78205-78224 None:intergenic 30.0%
!! AATTTGACATTTTGAGAGCA+AGG - tig0023518:78308-78327 Msa1409360:intron 30.0%
ATAATTTGGTTATGTGTCTC+TGG + tig0023518:78628-78647 None:intergenic 30.0%
TTGCAGTTAACAAAACACAT+AGG - tig0023518:78658-78677 Msa1409360:CDS 30.0%
AACAGCTACTATACTCTTAA+TGG + tig0023518:78697-78716 None:intergenic 30.0%
CAATGAAATTATGACACTCA+AGG + tig0023518:78834-78853 None:intergenic 30.0%
ATAGTAAATGTGATTGCAGA+TGG - tig0023518:78871-78890 Msa1409360:CDS 30.0%
!! TGACATTAGAGCTTTGATTT+TGG - tig0023518:79096-79115 Msa1409360:CDS 30.0%
CATATCTTTATGTGGATACA+TGG - tig0023518:79293-79312 Msa1409360:CDS 30.0%
ATCAAATCATCCAATCTATG+TGG - tig0023518:79590-79609 Msa1409360:intron 30.0%
TATAATCTTTAGTCCGAGAA+GGG + tig0023518:79624-79643 None:intergenic 30.0%
ATATAATCTTTAGTCCGAGA+AGG + tig0023518:79625-79644 None:intergenic 30.0%
TGGATACAAAAGTTTGCATA+TGG - tig0023518:79663-79682 Msa1409360:intron 30.0%
CTTATCTGTATTTCCATCAA+GGG + tig0023518:79721-79740 None:intergenic 30.0%
TCTTATCTGTATTTCCATCA+AGG + tig0023518:79722-79741 None:intergenic 30.0%
ACAGATAAGAACTACTGAAA+TGG - tig0023518:79732-79751 Msa1409360:intron 30.0%
TAAGAACTACTGAAATGGAT+AGG - tig0023518:79737-79756 Msa1409360:intron 30.0%
CTTGCAAAGATGAATGAATA+CGG + tig0023518:79849-79868 None:intergenic 30.0%
! TTTTTCATGTCTAAGGAGTT+AGG + tig0023518:79931-79950 None:intergenic 30.0%
!! TTCCTTCTTTTTCATGTCTA+AGG + tig0023518:79938-79957 None:intergenic 30.0%
GACATGAAAAAGAAGGAAAT+TGG - tig0023518:79940-79959 Msa1409360:intron 30.0%
TTGCACTTGGAAAATCTTTA+AGG + tig0023518:80048-80067 None:intergenic 30.0%
TTTCCAAGTGCAAATCATAA+AGG - tig0023518:80055-80074 Msa1409360:intron 30.0%
TTCCAAGTGCAAATCATAAA+GGG - tig0023518:80056-80075 Msa1409360:intron 30.0%
ATTTCAGATGTTCCAAAAAC+AGG - tig0023518:80255-80274 Msa1409360:intron 30.0%
TAGCTCAAGTATATATGCTT+TGG + tig0023518:80406-80425 None:intergenic 30.0%
TATGTAACTCTAGTGGTATT+TGG - tig0023518:80473-80492 Msa1409360:CDS 30.0%
ATTGGATGAGAAACTTCATA+TGG - tig0023518:80554-80573 Msa1409360:CDS 30.0%
!! AGATGATAGTGGTTTAATTC+AGG - tig0023518:80578-80597 Msa1409360:CDS 30.0%
CAGGTATATAATAAGGAGTT+TGG - tig0023518:80597-80616 Msa1409360:CDS 30.0%
GGCAAATCTTATACAACAAT+TGG + tig0023518:80689-80708 None:intergenic 30.0%
AGTATCCTATAAGATATTCG+TGG + tig0023518:80714-80733 None:intergenic 30.0%
CTCACTTAGATAATCTATTG+TGG - tig0023518:80732-80751 Msa1409360:five_prime_UTR 30.0%
ACTACGCATTGAACCAAAAA+TGG - tig0023518:77529-77548 Msa1409360:three_prime_UTR 35.0%
TTTGTTTGAGAAGAGAATGG+TGG + tig0023518:77592-77611 None:intergenic 35.0%
!! TGGTTTGTTTGAGAAGAGAA+TGG + tig0023518:77595-77614 None:intergenic 35.0%
CTTTCAATGATTTGACTGAG+AGG - tig0023518:77753-77772 Msa1409360:intron 35.0%
TGATTTGAAAAGAAGACCAG+AGG + tig0023518:77801-77820 None:intergenic 35.0%
!! ATGGATAAAGCTTTGGAAAG+AGG + tig0023518:77881-77900 None:intergenic 35.0%
TTCTTATATTTCAGACCGGA+GGG + tig0023518:78090-78109 None:intergenic 35.0%
TTTCTTATATTTCAGACCGG+AGG + tig0023518:78091-78110 None:intergenic 35.0%
! TTTCTTATATTTGAGACCGG+AGG - tig0023518:78243-78262 Msa1409360:intron 35.0%
! TTCTTATATTTGAGACCGGA+GGG - tig0023518:78244-78263 Msa1409360:intron 35.0%
!! AGTGTTGTTTAGTCTCAGTT+TGG - tig0023518:78336-78355 Msa1409360:intron 35.0%
!! TAAGCTTAGAAGGTTGATGA+TGG - tig0023518:78433-78452 Msa1409360:CDS 35.0%
TTTCACCAAACACACATGTA+AGG + tig0023518:78507-78526 None:intergenic 35.0%
!! TGTGTGTTTGGTGAAACTTT+TGG - tig0023518:78511-78530 Msa1409360:CDS 35.0%
!! TAGAGCTTTGATTTTGGACT+TGG - tig0023518:79102-79121 Msa1409360:CDS 35.0%
AAAATCTGATCCCATACTTG+CGG - tig0023518:79384-79403 Msa1409360:intron 35.0%
GTGGATGATATCTCAGTTAA+AGG - tig0023518:79412-79431 Msa1409360:intron 35.0%
AGCACATCATTTACATCTTC+TGG + tig0023518:79493-79512 None:intergenic 35.0%
GAAGATGTAAATGATGTGCT+TGG - tig0023518:79493-79512 Msa1409360:intron 35.0%
ATGCATTATCTCCAGACTTA+GGG + tig0023518:79537-79556 None:intergenic 35.0%
AATGCATTATCTCCAGACTT+AGG + tig0023518:79538-79557 None:intergenic 35.0%
TAAGTCTGGAGATAATGCAT+TGG - tig0023518:79537-79556 Msa1409360:intron 35.0%
GGATTTCTTTCCACATAGAT+TGG + tig0023518:79603-79622 None:intergenic 35.0%
GGACTAAAGATTATATTGCC+AGG - tig0023518:79629-79648 Msa1409360:intron 35.0%
ATTATATTGCCAGGCCAAAA+GGG - tig0023518:79638-79657 Msa1409360:intron 35.0%
! CTTTTGTATCCATTCCCTTT+TGG + tig0023518:79655-79674 None:intergenic 35.0%
CAGTGGATGTAAGTGAAATT+GGG - tig0023518:79686-79705 Msa1409360:intron 35.0%
GGCATCTCATTCATTATACA+AGG - tig0023518:79777-79796 Msa1409360:intron 35.0%
TCTCATTCATTATACAAGGC+TGG - tig0023518:79781-79800 Msa1409360:intron 35.0%
CTCCTTAGACATGAAAAAGA+AGG - tig0023518:79933-79952 Msa1409360:intron 35.0%
! ATCCCTTTATGATTTGCACT+TGG + tig0023518:80061-80080 None:intergenic 35.0%
! GACATCAAATCACCTGTTTT+TGG + tig0023518:80270-80289 None:intergenic 35.0%
AGGTGATTTGATGTCTTATC+AGG - tig0023518:80275-80294 Msa1409360:intron 35.0%
! TGCTTTGGTAATCAGATAGT+TGG + tig0023518:80391-80410 None:intergenic 35.0%
TTACATACAACTCATGAGAC+AGG + tig0023518:80460-80479 None:intergenic 35.0%
TGAGTTGTATGTAACTCTAG+TGG - tig0023518:80466-80485 Msa1409360:CDS 35.0%
!!! CTAGTGGTATTTGGTTTTGT+AGG - tig0023518:80482-80501 Msa1409360:CDS 35.0%
ATAATAAGGAGTTTGGCAAC+AGG - tig0023518:80604-80623 Msa1409360:CDS 35.0%
TCCTATAAGATATTCGTGGA+AGG + tig0023518:80710-80729 None:intergenic 35.0%
GAAACTTCATCTTGTCGTTG+CGG + tig0023518:77441-77460 None:intergenic 40.0%
AAGATGGTGATAGAGCTTGT+CGG - tig0023518:77728-77747 Msa1409360:intron 40.0%
TGATTTGACTGAGAGGATGA+AGG - tig0023518:77760-77779 Msa1409360:intron 40.0%
!! AGAGCTTTGAAGAACAGGAA+TGG + tig0023518:77834-77853 None:intergenic 40.0%
CATGGCAATGGATAAAGCTT+TGG + tig0023518:77888-77907 None:intergenic 40.0%
GTATACCACAATATTCCCTC+CGG + tig0023518:78262-78281 None:intergenic 40.0%
!! TGACATTTTGAGAGCAAGGA+AGG - tig0023518:78312-78331 Msa1409360:intron 40.0%
GTTGACCTTACATGTGTGTT+TGG - tig0023518:78499-78518 Msa1409360:CDS 40.0%
!! GTGTTTGGTGAAACTTTTGG+AGG - tig0023518:78514-78533 Msa1409360:CDS 40.0%
GATGCAGAAGTTATATCTGC+TGG - tig0023518:78893-78912 Msa1409360:CDS 40.0%
ATCTGCTGGAATATTGAGAG+AGG - tig0023518:78907-78926 Msa1409360:CDS 40.0%
! TGGAATATTGAGAGAGGTGT+TGG - tig0023518:78913-78932 Msa1409360:CDS 40.0%
CATGAAGTTCGAAGTCAGAT+AGG - tig0023518:78956-78975 Msa1409360:CDS 40.0%
! TGCATCTAGAGTAGACATTC+TGG - tig0023518:79027-79046 Msa1409360:CDS 40.0%
!! CTTTGAAGCTTGACATGATG+AGG - tig0023518:79125-79144 Msa1409360:CDS 40.0%
TCCACTAATTCCGCAAGTAT+GGG + tig0023518:79397-79416 None:intergenic 40.0%
ATCCACTAATTCCGCAAGTA+TGG + tig0023518:79398-79417 None:intergenic 40.0%
CACAATGAAGAAGCTCTTGA+AGG - tig0023518:79456-79475 Msa1409360:intron 40.0%
ATGAAGAAGCTCTTGAAGGA+TGG - tig0023518:79460-79479 Msa1409360:intron 40.0%
TGTGGAAAGAAATCCCTTCT+CGG - tig0023518:79608-79627 Msa1409360:intron 40.0%
GATTATATTGCCAGGCCAAA+AGG - tig0023518:79637-79656 Msa1409360:intron 40.0%
CAAAAGTTTGCATATGGCAG+TGG - tig0023518:79669-79688 Msa1409360:intron 40.0%
GCAGTGGATGTAAGTGAAAT+TGG - tig0023518:79685-79704 Msa1409360:intron 40.0%
TGGATGTAAGTGAAATTGGG+AGG - tig0023518:79689-79708 Msa1409360:intron 40.0%
! GAAATGGATAGGTTAGCTGT+TGG - tig0023518:79748-79767 Msa1409360:intron 40.0%
AAGAAAACACTAACCTCCTC+TGG + tig0023518:79817-79836 None:intergenic 40.0%
TCTAAGGAGTTAGGTCTAGA+TGG + tig0023518:79922-79941 None:intergenic 40.0%
! AGATGGGAAGATAAGCATTG+AGG - tig0023518:80129-80148 Msa1409360:intron 40.0%
!! AAGCATTGAGGAACTTACAG+AGG - tig0023518:80141-80160 Msa1409360:intron 40.0%
CTGAAATTCATCAGAGCTGA+GGG + tig0023518:80242-80261 None:intergenic 40.0%
! TCTGAAATTCATCAGAGCTG+AGG + tig0023518:80243-80262 None:intergenic 40.0%
!!! TTTGGTTTTGTAGGTCGAGA+TGG - tig0023518:80491-80510 Msa1409360:CDS 40.0%
CGAGATGGTTCGTAATTTAG+AGG - tig0023518:80506-80525 Msa1409360:CDS 40.0%
CTTCATATGGCAGATGATAG+TGG - tig0023518:80567-80586 Msa1409360:CDS 40.0%
GCCTTCCACGAATATCTTAT+AGG - tig0023518:80706-80725 Msa1409360:five_prime_UTR 40.0%
ACCCTCAACCTATCCTTAAA+GGG - tig0023518:80755-80774 Msa1409360:five_prime_UTR 40.0%
!! TTTTCACCCCCTTTAAGGAT+AGG + tig0023518:80766-80785 None:intergenic 40.0%
! GACTATTTTCACCCCCTTTA+AGG + tig0023518:80771-80790 None:intergenic 40.0%
TTCCTCTTTACAAACGGTTC+TGG + tig0023518:80800-80819 None:intergenic 40.0%
TCTCTCTTCTTCTAGTGGAG+TGG + tig0023518:77390-77409 None:intergenic 45.0%
ACTCCACTAGAAGAAGAGAG+AGG - tig0023518:77389-77408 Msa1409360:three_prime_UTR 45.0%
TCTCCTCTCTCTTCTTCTAG+TGG + tig0023518:77395-77414 None:intergenic 45.0%
GGAAGAAGAGTGAGAGTAAG+CGG + tig0023518:77631-77650 None:intergenic 45.0%
TATCACCATCTTTCCTCCAC+CGG + tig0023518:77720-77739 None:intergenic 45.0%
GTGTTATCCACAAGTTCCTC+TGG - tig0023518:77782-77801 Msa1409360:intron 45.0%
AAGAAGACCAGAGGAACTTG+TGG + tig0023518:77792-77811 None:intergenic 45.0%
!! AGAGGAGAGCTTTGAAGAAC+AGG + tig0023518:77839-77858 None:intergenic 45.0%
TCTTAAACTTCTCCTCCCTC+CGG - tig0023518:78072-78091 Msa1409360:CDS 45.0%
TTATATTTCAGACCGGAGGG+AGG + tig0023518:78087-78106 None:intergenic 45.0%
!! TTGAGAGAGGTGTTGGAAGT+AGG - tig0023518:78920-78939 Msa1409360:CDS 45.0%
AGGTTCTGCTACTGCTCATT+TGG - tig0023518:78976-78995 Msa1409360:CDS 45.0%
! CTTGACATGATGAGGCATCT+TGG - tig0023518:79133-79152 Msa1409360:CDS 45.0%
ATGATCTGCTGCTGATACCT+TGG + tig0023518:79166-79185 None:intergenic 45.0%
GGATACATGGTTGAGAAGTC+AGG - tig0023518:79306-79325 Msa1409360:CDS 45.0%
TCCCATACTTGCGGAATTAG+TGG - tig0023518:79393-79412 Msa1409360:intron 45.0%
AGAAGCTCTTGAAGGATGGT+CGG - tig0023518:79464-79483 Msa1409360:intron 45.0%
GGAGATAATGCATTGGAAGC+TGG - tig0023518:79544-79563 Msa1409360:intron 45.0%
! ATGGATAGGTTAGCTGTTGG+TGG - tig0023518:79751-79770 Msa1409360:intron 45.0%
! TAGGTTAGCTGTTGGTGGAA+TGG - tig0023518:79756-79775 Msa1409360:intron 45.0%
! TGGTCTTACTAATCCAGAGG+AGG - tig0023518:79801-79820 Msa1409360:intron 45.0%
GCGTTTAAAGACCATCATGC+TGG - tig0023518:79997-80016 Msa1409360:intron 45.0%
TTTCGCCTTCTCGACAAGAA+CGG - tig0023518:80106-80125 Msa1409360:intron 45.0%
TTCTCGACAAGAACGGAGAT+GGG - tig0023518:80113-80132 Msa1409360:intron 45.0%
GGAACTTACAGAGGTGATAG+AGG - tig0023518:80150-80169 Msa1409360:intron 45.0%
ATGTCATGTGCATCTTCTCC+TGG + tig0023518:80187-80206 None:intergenic 45.0%
! CTTCTTGACTCGAACAGTGA+TGG - tig0023518:80214-80233 Msa1409360:intron 45.0%
GACCCTCAACCTATCCTTAA+AGG - tig0023518:80754-80773 Msa1409360:five_prime_UTR 45.0%
! CCCCTTTAAGGATAGGTTGA+GGG + tig0023518:80759-80778 None:intergenic 45.0%
CCCTCAACCTATCCTTAAAG+GGG - tig0023518:80756-80775 Msa1409360:five_prime_UTR 45.0%
CCTCAACCTATCCTTAAAGG+GGG - tig0023518:80757-80776 Msa1409360:five_prime_UTR 45.0%
AGCCAGAACCGTTTGTAAAG+AGG - tig0023518:80795-80814 Msa1409360:five_prime_UTR 45.0%
AGAAGAGTGAGAGTAAGCGG+TGG + tig0023518:77628-77647 None:intergenic 50.0%
ACTTCTACAGCACACGCTCT+CGG + tig0023518:77695-77714 None:intergenic 50.0%
ATCACCATCTTTCCTCCACC+GGG + tig0023518:77719-77738 None:intergenic 50.0%
AGCTCTCCTCTTACTCCTGA+TGG - tig0023518:77848-77867 Msa1409360:intron 50.0%
! ATCAGCGAGAAGCATGGCAA+TGG + tig0023518:77900-77919 None:intergenic 50.0%
CTGAAGATCAGCGAGAAGCA+TGG + tig0023518:77906-77925 None:intergenic 50.0%
CATGCTTCTCGCTGATCTTC+AGG - tig0023518:77904-77923 Msa1409360:intron 50.0%
TGAGACCGGAGGGAATATTG+TGG - tig0023518:78254-78273 Msa1409360:intron 50.0%
TCTGCTGCTGATACCTTGGA+AGG + tig0023518:79162-79181 None:intergenic 50.0%
ATTCCCACAGCATGAGCAAG+AGG + tig0023518:79217-79236 None:intergenic 50.0%
TGGTTGAGAAGTCAGGAGAC+AGG - tig0023518:79313-79332 Msa1409360:CDS 50.0%
TTGAGAAGTCAGGAGACAGG+TGG - tig0023518:79316-79335 Msa1409360:CDS 50.0%
! GTGGTGTTGAACCCTAAGTC+TGG - tig0023518:79523-79542 Msa1409360:intron 50.0%
ATTGCCAGGCCAAAAGGGAA+TGG - tig0023518:79643-79662 Msa1409360:intron 50.0%
! GTATCCATTCCCTTTTGGCC+TGG + tig0023518:79650-79669 None:intergenic 50.0%
!! GGCTGGTCTTACTAATCCAG+AGG - tig0023518:79798-79817 Msa1409360:intron 50.0%
CATCTCCGTTCTTGTCGAGA+AGG + tig0023518:80114-80133 None:intergenic 50.0%
CTTCTCGACAAGAACGGAGA+TGG - tig0023518:80112-80131 Msa1409360:intron 50.0%
ACAGAGGTGATAGAGGAGCT+TGG - tig0023518:80157-80176 Msa1409360:intron 50.0%
! CCCCCTTTAAGGATAGGTTG+AGG + tig0023518:80760-80779 None:intergenic 50.0%
! AGAAGAGAATGGTGGCGCGT+GGG + tig0023518:77584-77603 None:intergenic 55.0%
TAAGCGGTGGTGAGTGGTAG+TGG + tig0023518:77615-77634 None:intergenic 55.0%
TGAGAGTAAGCGGTGGTGAG+TGG + tig0023518:77621-77640 None:intergenic 55.0%
GCGTGTGCTGTAGAAGTTCC+CGG - tig0023518:77698-77717 Msa1409360:CDS 55.0%
TGTGCTGTAGAAGTTCCCGG+TGG - tig0023518:77701-77720 Msa1409360:CDS 55.0%
AGTTCCCGGTGGAGGAAAGA+TGG - tig0023518:77712-77731 Msa1409360:CDS 55.0%
GAGCGACCATCAGGAGTAAG+AGG + tig0023518:77857-77876 None:intergenic 55.0%
GAAAGAGGAGAGCGACCATC+AGG + tig0023518:77866-77885 None:intergenic 55.0%
GGCATCTTGGTCACCTTCCA+AGG - tig0023518:79146-79165 Msa1409360:CDS 55.0%
TGCTCCTCTTGCTCATGCTG+TGG - tig0023518:79210-79229 Msa1409360:CDS 55.0%
GCTCCTCTTGCTCATGCTGT+GGG - tig0023518:79211-79230 Msa1409360:CDS 55.0%
TGATGTGCTTGGACTGCGAG+TGG - tig0023518:79504-79523 Msa1409360:intron 55.0%
! TGGAGAGAGAGCGTGCTACA+GGG - tig0023518:79564-79583 Msa1409360:intron 55.0%
TGGGAGGACTAGACCCTTGA+TGG - tig0023518:79705-79724 Msa1409360:intron 55.0%
TTCAGCTGCAGCCAGCATGA+TGG + tig0023518:80011-80030 None:intergenic 55.0%
!! ATAGAGGAGCTTGGTGCACC+AGG - tig0023518:80166-80185 Msa1409360:intron 55.0%
! ATGGTGGCGCGTGGGGTAAT+CGG + tig0023518:77576-77595 None:intergenic 60.0%
! GAAGAGAATGGTGGCGCGTG+GGG + tig0023518:77583-77602 None:intergenic 60.0%
! GAGAAGAGAATGGTGGCGCG+TGG + tig0023518:77585-77604 None:intergenic 60.0%
TACAGCACACGCTCTCGGAG+TGG + tig0023518:77690-77709 None:intergenic 60.0%
GCTGTAGAAGTTCCCGGTGG+AGG - tig0023518:77704-77723 Msa1409360:CDS 60.0%
! CTGGAGAGAGAGCGTGCTAC+AGG - tig0023518:79563-79582 Msa1409360:intron 60.0%
! CATGCTGGCTGCAGCTGAAC+TGG - tig0023518:80012-80031 Msa1409360:intron 60.0%
GCGTGGGGTAATCGGAAGCG+TGG + tig0023518:77568-77587 None:intergenic 65.0%
ACGCTCTCGGAGTGGACCAC+CGG + tig0023518:77682-77701 None:intergenic 65.0%
TGACGCGGGTGGGTCGAGTG+GGG + tig0023518:77652-77671 None:intergenic 70.0%
GTGACGCGGGTGGGTCGAGT+GGG + tig0023518:77653-77672 None:intergenic 70.0%
ACTCGACCCACCCGCGTCAC+CGG - tig0023518:77653-77672 Msa1409360:CDS 70.0%
ACCACCGGAGACCGGTGACG+CGG + tig0023518:77667-77686 None:intergenic 70.0%
CGGAGTGGACCACCGGAGAC+CGG + tig0023518:77675-77694 None:intergenic 70.0%
GGTGACGCGGGTGGGTCGAG+TGG + tig0023518:77654-77673 None:intergenic 75.0%
CGGAGACCGGTGACGCGGGT+GGG + tig0023518:77662-77681 None:intergenic 75.0%
CCACCCGCGTCACCGGTCTC+CGG - tig0023518:77660-77679 Msa1409360:CDS 75.0%
CCACCGGAGACCGGTGACGC+GGG + tig0023518:77666-77685 None:intergenic 75.0%
! CCGGAGACCGGTGACGCGGG+TGG + tig0023518:77663-77682 None:intergenic 80.0%
! CCCGCGTCACCGGTCTCCGG+TGG - tig0023518:77663-77682 Msa1409360:CDS 80.0%
Chromosome Type Strat End Strand Name
tig0023518 gene 77370 80872 77370 ID=Msa1409360;Name=Msa1409360
tig0023518 mRNA 77370 80872 77370 ID=Msa1409360-mRNA-1;Parent=Msa1409360;Name=Msa1409360-mRNA-1;_AED=0.15;_eAED=0.15;_QI=178|1|1|1|1|1|4|234|576
tig0023518 exon 77370 77738 77370 ID=Msa1409360-mRNA-1:exon:26004;Parent=Msa1409360-mRNA-1
tig0023518 exon 77966 78250 77966 ID=Msa1409360-mRNA-1:exon:26003;Parent=Msa1409360-mRNA-1
tig0023518 exon 78420 79352 78420 ID=Msa1409360-mRNA-1:exon:26002;Parent=Msa1409360-mRNA-1
tig0023518 exon 80317 80872 80317 ID=Msa1409360-mRNA-1:exon:26001;Parent=Msa1409360-mRNA-1
tig0023518 five_prime_UTR 80695 80872 80695 ID=Msa1409360-mRNA-1:five_prime_utr;Parent=Msa1409360-mRNA-1
tig0023518 CDS 80317 80694 80317 ID=Msa1409360-mRNA-1:cds;Parent=Msa1409360-mRNA-1
tig0023518 CDS 78420 79352 78420 ID=Msa1409360-mRNA-1:cds;Parent=Msa1409360-mRNA-1
tig0023518 CDS 77966 78250 77966 ID=Msa1409360-mRNA-1:cds;Parent=Msa1409360-mRNA-1
tig0023518 CDS 77604 77738 77604 ID=Msa1409360-mRNA-1:cds;Parent=Msa1409360-mRNA-1
tig0023518 three_prime_UTR 77370 77603 77370 ID=Msa1409360-mRNA-1:three_prime_utr;Parent=Msa1409360-mRNA-1
Gene Sequence

>Msa1409360

ATGGAACTCTTACACTTCCACGCTTCCGATTACCCCACGCGCCACCATTCTCTTCTCAAACAAACCACTACCACTCACCACCGCTTACTCTCACTCTTCTTCCCCACTCGACCCACCCGCGTCACCGGTCTCCGGTGGTCCACTCCGAGAGCGTGTGCTGTAGAAGTTCCCGGTGGAGGAAAGATGGTGATAGAGCTTGTCGGTGCTTTCAATGATTTGACTGAGAGGATGAAGGTGTTATCCACAAGTTCCTCTGGTCTTCTTTTCAAATCATTGAAACTCTCCATTCCTGTTCTTCAAAGCTCTCCTCTTACTCCTGATGGTCGCTCTCCTCTTTCCAAAGCTTTATCCATTGCCATGCTTCTCGCTGATCTTCAGATGGATGCAGAAGTTATATCTGCTGGAATATTGAGAGAGGTGTTGGAAGTAGGTGAGTTAAATCTACATGAAGTTCGAAGTCAGATAGGTTCTGCTACTGCTCATTTGGTGCACGAGAGTTTGCGTGTTAAGAACTTTGCATCTAGAGTAGACATTCTGGATGAAGAGAATGCTGCTGCTTTGAGAAAGTTCTGTCTCACTTACTATGACATTAGAGCTTTGATTTTGGACTTGGCTTTGAAGCTTGACATGATGAGGCATCTTGGTCACCTTCCAAGGTATCAGCAGCAGATCATTTCTCTGCAAGTTATGAAAATATATGCTCCTCTTGCTCATGCTGTGGGAATTAACTACATATCACTTGAATTGGAAGATCTCTCGTTTCAGTATTTGTTTCCTTATTCATATCTTTATGTGGATACATGGTTGAGAAGTCAGGAGACAGGTGGTATATCTCTTATCGATGTATACAAAGATGAATTGCTTCAGTCACTAAAATCTGATCCCATACTTGCGGAATTAGTGGATGATATCTCAGTTAAAGGTCGTTATAAAAGTCGTTACAGCACAATGAAGAAGCTCTTGAAGGATGGTCGGAGACCAGAAGATGTAAATGATGTGCTTGGACTGCGAGTGGTGTTGAACCCTAAGTCTGGAGATAATGCATTGGAAGCTGGAGAGAGAGCGTGCTACAGGGCTCATCAAATCATCCAATCTATGTGGAAAGAAATCCCTTCTCGGACTAAAGATTATATTGCCAGGCCAAAAGGGAATGGATACAAAAGTTTGCATATGGCAGTGGATGTAAGTGAAATTGGGAGGACTAGACCCTTGATGGAAATACAGATAAGAACTACTGAAATGGATAGGTTAGCTGTTGGTGGAATGGCATCTCATTCATTATACAAGGCTGGTCTTACTAATCCAGAGGAGGCAAAGCGTTTAAAGACCATCATGCTGGCTGCAGCTGAACTGGCTGCTTTGCGCCTTAAAGATTTTCCAAGTGCAAATCATAAAGGGATTGAATTTGATCAGAGAGATAGAGTATTTCGCCTTCTCGACAAGAACGGAGATGGGAAGATAAGCATTGAGGAACTTACAGAGGTGATAGAGGAGCTTGGTGCACCAGGAGAAGATGCACATGACATGATGCTGCTTCTTGACTCGAACAGTGATGGCTCCCTCAGCTCTGATGAATTTCAGATGTTCCAAAAACAGGTCGAGATGGTTCGTAATTTAGAGGACAGAGATGATGAATACAAGAAAATATTGGATGAGAAACTTCATATGGCAGATGATAGTGGTTTAATTCAGGTATATAATAAGGAGTTTGGCAACAGGCTTGTGAGCTAG

Protein sequence

>Msa1409360

MELLHFHASDYPTRHHSLLKQTTTTHHRLLSLFFPTRPTRVTGLRWSTPRACAVEVPGGGKMVIELVGAFNDLTERMKVLSTSSSGLLFKSLKLSIPVLQSSPLTPDGRSPLSKALSIAMLLADLQMDAEVISAGILREVLEVGELNLHEVRSQIGSATAHLVHESLRVKNFASRVDILDEENAAALRKFCLTYYDIRALILDLALKLDMMRHLGHLPRYQQQIISLQVMKIYAPLAHAVGINYISLELEDLSFQYLFPYSYLYVDTWLRSQETGGISLIDVYKDELLQSLKSDPILAELVDDISVKGRYKSRYSTMKKLLKDGRRPEDVNDVLGLRVVLNPKSGDNALEAGERACYRAHQIIQSMWKEIPSRTKDYIARPKGNGYKSLHMAVDVSEIGRTRPLMEIQIRTTEMDRLAVGGMASHSLYKAGLTNPEEAKRLKTIMLAAAELAALRLKDFPSANHKGIEFDQRDRVFRLLDKNGDGKISIEELTEVIEELGAPGEDAHDMMLLLDSNSDGSLSSDEFQMFQKQVEMVRNLEDRDDEYKKILDEKLHMADDSGLIQVYNKEFGNRLVS*