AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0227130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0227130 MtrunA17_Chr2g0333621 94.322 317 14 4 285 599 1 315 0.0 580
Msa0227130 MtrunA17_Chr2g0333621 46.798 203 93 3 37 231 118 313 6.47e-48 170
Msa0227130 MtrunA17_Chr2g0333641 79.808 312 55 6 285 594 1 306 2.20e-165 474
Msa0227130 MtrunA17_Chr2g0333641 45.128 195 95 3 37 226 117 304 2.21e-40 149
Msa0227130 MtrunA17_Chr2g0333611 91.892 222 15 3 14 234 1 220 4.28e-141 408
Msa0227130 MtrunA17_Chr2g0333611 44.660 206 97 4 399 597 22 217 4.96e-45 159
Msa0227130 MtrunA17_Chr4g0002801 45.584 351 130 13 285 595 1 330 4.18e-77 248
Msa0227130 MtrunA17_Chr4g0002801 47.692 195 86 3 47 230 142 331 1.75e-46 166
Msa0227130 MtrunA17_Chr4g0002781 45.125 359 139 12 285 595 1 349 8.34e-77 248
Msa0227130 MtrunA17_Chr4g0002781 47.396 192 88 3 47 230 164 350 2.95e-44 161
Msa0227130 MtrunA17_Chr8g0336681 50.204 245 112 5 361 598 97 338 2.07e-59 201
Msa0227130 MtrunA17_Chr8g0336681 46.377 207 90 4 45 237 144 343 8.61e-47 167
Msa0227130 MtrunA17_Chr5g0400661 40.777 309 132 13 326 595 38 334 9.35e-49 172
Msa0227130 MtrunA17_Chr5g0400661 43.316 187 85 5 56 225 148 330 1.14e-38 145
Msa0227130 MtrunA17_Chr5g0400621 43.590 234 114 6 366 591 102 325 4.29e-47 168
Msa0227130 MtrunA17_Chr5g0400621 42.553 188 94 4 50 230 150 330 1.10e-37 142
Msa0227130 MtrunA17_Chr7g0249811 36.648 352 158 9 285 595 1 328 1.75e-46 166
Msa0227130 MtrunA17_Chr7g0249811 45.745 188 92 4 47 233 154 332 1.83e-35 136
Msa0227130 MtrunA17_Chr4g0054561 48.187 193 91 4 405 594 138 324 7.23e-45 162
Msa0227130 MtrunA17_Chr4g0054561 39.785 186 102 5 50 231 148 327 1.58e-32 127
Msa0227130 MtrunA17_Chr2g0280161 50.282 177 82 3 418 591 173 346 1.28e-41 154
Msa0227130 MtrunA17_Chr2g0280161 44.253 174 86 4 58 225 178 346 5.66e-37 141
Msa0227130 MtrunA17_Chr4g0049331 42.381 210 108 5 392 594 103 306 1.80e-40 149
Msa0227130 MtrunA17_Chr4g0049331 40.449 178 90 4 56 225 134 303 1.11e-34 133
Msa0227130 MtrunA17_Chr4g0033291 36.981 265 149 5 343 599 74 328 2.39e-40 149
Msa0227130 MtrunA17_Chr4g0033291 40.107 187 107 2 45 231 145 326 6.94e-32 126
Msa0227130 MtrunA17_Chr2g0333541 37.627 295 146 8 304 591 1 264 2.88e-40 148
Msa0227130 MtrunA17_Chr2g0333541 43.541 209 93 6 31 225 67 264 2.29e-34 131
Msa0227130 MtrunA17_Chr4g0033391 38.735 253 136 6 343 595 83 316 5.06e-40 149
Msa0227130 MtrunA17_Chr4g0033391 36.082 194 119 2 38 231 130 318 2.80e-32 127
Msa0227130 MtrunA17_Chr4g0054551 46.114 193 95 4 405 594 138 324 8.00e-40 148
Msa0227130 MtrunA17_Chr4g0054551 35.556 225 132 6 17 231 106 327 7.63e-31 123
Msa0227130 MtrunA17_Chr4g0054581 38.996 259 131 6 366 599 122 378 2.46e-39 148
Msa0227130 MtrunA17_Chr4g0054581 41.667 204 101 7 38 231 181 376 4.31e-36 139
Msa0227130 MtrunA17_Chr2g0307131 39.004 241 133 5 366 599 122 355 3.21e-39 147
Msa0227130 MtrunA17_Chr2g0307131 36.923 195 120 3 38 231 161 353 3.19e-35 136
Msa0227130 MtrunA17_Chr4g0054571 34.259 324 191 6 281 597 23 331 8.73e-39 145
Msa0227130 MtrunA17_Chr4g0054571 40.212 189 90 4 58 231 151 331 2.28e-27 113
Msa0227130 MtrunA17_Chr6g0468491 39.847 261 141 8 343 599 65 313 1.13e-38 144
Msa0227130 MtrunA17_Chr6g0468491 39.706 204 110 6 34 231 115 311 1.40e-33 130
Msa0227130 MtrunA17_Chr7g0233441 46.995 183 81 4 412 591 23 192 3.45e-38 139
Msa0227130 MtrunA17_Chr7g0233441 30.667 225 123 5 1 225 1 192 1.72e-23 98.6
Msa0227130 MtrunA17_Chr5g0400671 37.349 249 137 6 354 595 87 323 1.12e-36 139
Msa0227130 MtrunA17_Chr5g0400671 41.304 184 101 4 48 229 145 323 7.87e-36 137
Msa0227130 MtrunA17_Chr2g0307141 42.778 180 98 3 422 599 183 359 3.72e-36 139
Msa0227130 MtrunA17_Chr2g0307141 37.288 177 109 2 56 231 182 357 2.86e-32 127
Msa0227130 MtrunA17_Chr4g0033281 36.759 253 147 4 343 595 82 321 7.21e-34 131
Msa0227130 MtrunA17_Chr4g0033281 36.869 198 97 4 45 231 143 323 1.92e-30 122
Msa0227130 MtrunA17_Chr7g0225901 43.182 176 91 4 404 575 70 240 1.26e-33 129
Msa0227130 MtrunA17_Chr7g0225901 36.967 211 106 8 16 209 40 240 7.33e-30 118
Msa0227130 MtrunA17_Chr4g0002851 49.007 151 54 3 443 591 63 192 2.09e-33 126
Msa0227130 MtrunA17_Chr4g0002851 30.131 229 119 7 1 225 1 192 4.42e-23 97.4
Msa0227130 MtrunA17_Chr4g0054621 34.419 215 116 4 35 231 132 339 1.10e-31 125
Msa0227130 MtrunA17_Chr4g0054621 33.333 216 120 3 389 599 145 341 3.98e-30 121
Msa0227130 MtrunA17_Chr4g0002831 44.848 165 74 5 433 594 53 203 2.30e-31 121
Msa0227130 MtrunA17_Chr4g0002831 37.725 167 92 4 60 225 45 200 5.24e-24 100
Msa0227130 MtrunA17_Chr5g0400641 42.138 159 87 3 425 581 1 156 2.36e-29 114
Msa0227130 MtrunA17_Chr5g0400641 36.810 163 89 4 60 215 1 156 1.37e-24 100
Msa0227130 MtrunA17_Chr6g0468461 34.021 194 101 4 16 209 145 311 4.22e-26 110
Msa0227130 MtrunA17_Chr6g0468461 34.199 231 124 5 346 575 108 311 3.83e-24 104
Msa0227130 MtrunA17_Chr8g0368371 37.419 155 76 5 304 451 1 141 3.27e-16 75.9
Msa0227130 MtrunA17_Chr8g0346161 24.664 223 132 5 339 559 240 428 2.77e-15 78.6
Msa0227130 MtrunA17_Chr1g0185621 27.473 182 119 3 387 556 436 616 2.25e-14 76.3
Msa0227130 MtrunA17_Chr1g0185621 28.777 139 91 2 58 188 476 614 6.97e-12 68.6
Msa0227130 MtrunA17_Chr5g0411341 27.848 237 137 6 351 559 410 640 4.43e-14 75.5
Msa0227130 MtrunA17_Chr8g0366751 26.190 252 161 6 330 559 361 609 9.86e-14 74.3
Msa0227130 MtrunA17_Chr8g0336671 52.308 65 29 1 23 87 3 65 3.93e-13 65.1
Msa0227130 MtrunA17_Chr7g0275821 37.168 113 62 3 421 533 251 354 7.41e-13 70.9
Msa0227130 MtrunA17_Chr7g0275821 25.294 170 118 4 58 227 253 413 1.63e-11 66.6
Msa0227130 MtrunA17_Chr8g0346151 21.264 174 133 2 411 580 267 440 1.68e-12 69.7
Msa0227130 MtrunA17_Chr8g0386921 25.523 239 144 7 386 599 375 604 5.69e-12 68.6
Msa0227130 MtrunA17_Chr7g0260841 29.586 169 96 4 314 478 263 412 2.22e-11 66.6
Msa0227130 MtrunA17_Chr1g0211081 26.047 215 125 5 374 559 272 481 2.86e-11 66.2
Msa0227130 MtrunA17_Chr3g0131691 29.630 162 102 4 407 559 286 444 4.80e-11 65.5
Msa0227130 MtrunA17_Chr2g0298751 22.672 247 154 7 4 233 11 237 7.20e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0227130 AT4G37850.2 34.161 322 183 9 290 597 21 327 1.11e-41 154
Msa0227130 AT4G37850.2 39.175 194 107 4 38 225 133 321 4.98e-32 127
Msa0227130 AT4G37850.1 34.161 322 183 9 290 597 21 327 1.11e-41 154
Msa0227130 AT4G37850.1 39.175 194 107 4 38 225 133 321 4.98e-32 127
Msa0227130 AT2G22760.1 41.799 189 91 5 414 591 111 291 1.35e-35 135
Msa0227130 AT2G22760.1 38.043 184 97 5 42 217 108 282 2.31e-31 124
Msa0227130 AT2G22750.2 38.494 239 131 7 362 590 65 297 1.13e-33 130
Msa0227130 AT2G22750.2 36.869 198 97 5 50 231 119 304 2.48e-27 112
Msa0227130 AT2G22750.5 38.494 239 131 7 362 590 89 321 1.38e-33 131
Msa0227130 AT2G22750.5 36.869 198 97 5 50 231 143 328 5.05e-27 112
Msa0227130 AT2G22750.3 38.494 239 131 7 362 590 93 325 1.74e-33 131
Msa0227130 AT2G22750.3 36.869 198 97 5 50 231 147 332 5.17e-27 112
Msa0227130 AT2G22760.2 43.023 172 80 4 414 575 111 274 1.36e-32 127
Msa0227130 AT2G22760.2 38.636 176 91 5 42 209 108 274 3.88e-29 117
Msa0227130 AT2G22750.1 38.494 239 130 8 362 590 65 296 2.65e-32 127
Msa0227130 AT2G22750.1 36.869 198 96 6 50 231 119 303 5.18e-26 108
Msa0227130 AT2G22750.4 38.494 239 130 8 362 590 93 324 3.73e-32 127
Msa0227130 AT2G22750.4 36.869 198 96 6 50 231 147 331 1.01e-25 108
Msa0227130 AT2G22770.1 36.607 224 113 4 400 594 95 318 5.50e-30 120
Msa0227130 AT2G22770.1 37.895 190 95 4 55 225 130 315 6.70e-29 117
Msa0227130 AT4G09820.1 34.483 145 74 1 412 556 353 476 7.63e-17 84.3
Msa0227130 AT4G09820.1 32.394 142 76 3 43 184 349 470 5.35e-14 75.5
Msa0227130 AT4G17880.1 28.571 217 140 6 347 559 347 552 9.45e-16 80.9
Msa0227130 AT5G46760.1 26.860 242 164 6 325 559 320 555 4.37e-14 75.9
Msa0227130 AT5G46760.1 25.824 182 104 3 58 213 416 592 2.00e-11 67.4
Msa0227130 AT3G61950.6 32.877 146 81 4 418 554 124 261 6.35e-14 73.2
Msa0227130 AT1G63650.3 31.333 150 82 4 422 552 405 552 8.76e-14 74.7
Msa0227130 AT1G63650.3 29.412 153 86 4 54 186 402 552 7.04e-11 65.5
Msa0227130 AT1G63650.1 31.333 150 82 4 422 552 405 552 8.76e-14 74.7
Msa0227130 AT1G63650.1 29.412 153 86 4 54 186 402 552 7.04e-11 65.5
Msa0227130 AT1G63650.2 31.333 150 82 4 422 552 405 552 8.76e-14 74.7
Msa0227130 AT1G63650.2 29.412 153 86 4 54 186 402 552 7.04e-11 65.5
Msa0227130 AT3G61950.3 32.877 146 81 4 418 554 175 312 1.13e-13 73.2
Msa0227130 AT3G61950.2 32.877 146 81 4 418 554 124 261 1.22e-13 72.4
Msa0227130 AT3G61950.1 32.877 146 81 4 418 554 175 312 1.70e-13 72.8
Msa0227130 AT2G46510.1 46.575 73 38 1 405 476 377 449 1.03e-12 71.2
Msa0227130 AT1G32640.1 30.519 154 98 5 411 559 440 589 1.40e-12 71.2
Msa0227130 AT5G57150.3 25.225 222 133 7 1 206 9 213 2.90e-12 67.0
Msa0227130 AT5G57150.2 25.225 222 133 7 1 206 9 213 2.99e-12 67.0
Msa0227130 AT5G41315.2 30.065 153 85 3 422 552 449 601 4.04e-12 69.7
Msa0227130 AT5G41315.3 30.065 153 85 3 422 552 446 598 4.14e-12 69.7
Msa0227130 AT5G41315.1 30.065 153 85 3 422 552 441 593 4.37e-12 69.3
Msa0227130 AT5G57150.1 25.217 230 140 7 1 215 9 221 5.04e-12 66.6
Msa0227130 AT4G29930.6 24.554 224 137 7 3 218 10 209 7.40e-12 65.9
Msa0227130 AT4G29930.2 23.394 218 144 5 3 218 10 206 1.02e-11 65.5
Msa0227130 AT5G57150.5 25.339 221 133 7 1 206 9 212 1.57e-11 64.7
Msa0227130 AT5G57150.4 25.225 222 133 7 1 206 9 213 2.00e-11 65.5
Msa0227130 AT1G12860.2 31.410 156 90 5 423 567 268 417 2.07e-11 66.6
Msa0227130 AT1G12860.1 31.410 156 90 5 423 567 268 417 2.50e-11 66.6
Msa0227130 AT4G29930.5 23.469 196 128 4 3 196 10 185 4.91e-11 63.5
Msa0227130 AT2G16910.1 28.804 184 101 6 423 585 315 489 5.11e-11 65.9
Msa0227130 AT3G26744.6 32.639 144 82 5 423 554 308 448 5.13e-11 65.9
Msa0227130 AT3G26744.1 31.210 157 93 5 423 567 308 461 5.69e-11 65.5
Msa0227130 AT3G26744.4 31.210 157 93 5 423 567 308 461 5.69e-11 65.5
Msa0227130 AT3G26744.2 31.210 157 93 5 423 567 308 461 5.69e-11 65.5
Msa0227130 AT1G01260.1 34.653 101 64 2 411 509 421 521 7.55e-11 65.5
Msa0227130 AT1G01260.2 34.653 101 64 2 411 509 421 521 7.55e-11 65.5
Msa0227130 AT1G01260.3 34.653 101 64 2 411 509 421 521 7.55e-11 65.5

Find 133 sgRNAs with CRISPR-Local

Find 651 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTACTTCTTGTTCTGATTC+TGG 0.178025 2_1:-77783232 None:intergenic
TCATCCACGTAATGATAATT+TGG 0.206550 2_1:+77775848 Msa0227130:CDS
CAGCAACCTGTTACATATTC+TGG 0.210205 2_1:+77783070 Msa0227130:CDS
ATGCCAATGGCCTCCACTTC+AGG 0.214258 2_1:-77775891 None:intergenic
AAATGTGGGCTTCGGTTTAA+AGG 0.229301 2_1:+77787501 Msa0227130:three_prime_UTR
GAACGAAACATAATCATAAT+TGG 0.254917 2_1:-77787597 None:intergenic
GCCAGCAGTGTATTTCCTTT+TGG 0.257466 2_1:+77785599 Msa0227130:CDS
CCATGTGTAGCAGCATTATT+AGG 0.265823 2_1:-77774132 None:intergenic
TGGAGCAATCATGGGAAAAT+TGG 0.268938 2_1:+77782780 Msa0227130:CDS
TTACTTCTACTCTTTGTTCT+TGG 0.277856 2_1:-77783253 None:intergenic
GGAGAATTGGTTCTCTAATA+TGG 0.295421 2_1:+77773915 Msa0227130:CDS
CAGAAGCATCCAACAATAAT+AGG 0.297499 2_1:+77774090 Msa0227130:CDS
ACATAATGTCAGAGAGAAAA+AGG 0.300304 2_1:+77774196 Msa0227130:CDS
TTCTGAGGTATTGTTTGCTT+TGG 0.319812 2_1:+77787641 Msa0227130:three_prime_UTR
GCACTTTCAGCTACTATTCC+TGG 0.324686 2_1:+77783409 Msa0227130:CDS
TTAGGTATAGATAAAGTAAA+AGG 0.327176 2_1:-77773877 None:intergenic
TCAGTGTTTGGATCACATTA+TGG 0.344284 2_1:+77783345 Msa0227130:CDS
GAACAATGTCCTATTATTGT+TGG 0.353321 2_1:-77774099 None:intergenic
TAGAAGTGGTTCTCAGTGTT+TGG 0.364117 2_1:+77783333 Msa0227130:CDS
TGTATTTATCGGGTGATCTA+TGG 0.368338 2_1:-77773846 None:intergenic
ATCCACTGTGAGAAGGAAAA+TGG 0.369029 2_1:+77785524 Msa0227130:CDS
AATACTCTTGCTTTAACATC+AGG 0.372630 2_1:-77785479 None:intergenic
ATAGACAAGGTTTCTGTACT+TGG 0.374394 2_1:+77775708 Msa0227130:CDS
TTCTTCTCATGGAGCAATCA+TGG 0.379874 2_1:+77782771 Msa0227130:CDS
ACCAGCAGTGTGCTTCCATT+TGG 0.381044 2_1:+77776020 Msa0227130:CDS
TGGAGAATTGGTGGGAGAAT+TGG 0.381146 2_1:+77773902 Msa0227130:CDS
AAGTAATAATAAGAGGAGTT+TGG 0.391916 2_1:+77783270 Msa0227130:CDS
GTTCAAACTATTGTCAATGC+TGG 0.402081 2_1:+77775974 Msa0227130:CDS
TGGCTTCACTATTGTTGCTC+AGG 0.404693 2_1:+77785634 Msa0227130:CDS
AAAATTTGAAATGTGGGCTT+CGG 0.414230 2_1:+77787493 Msa0227130:three_prime_UTR
CTATACCTAACATGGAGAAT+TGG 0.414546 2_1:+77773890 Msa0227130:exon
CTGCTTCCAGAATATGTAAC+AGG 0.414669 2_1:-77783076 None:intergenic
CAGAACATGTTGCATATTTG+AGG 0.415633 2_1:-77787623 None:intergenic
AGAGAGATTCATAGCACTTT+CGG 0.417342 2_1:+77774233 Msa0227130:CDS
GGCAGATGGGTGAGGAATAC+AGG 0.417383 2_1:+77776159 Msa0227130:intron
ATTGATGACAAAGTTGAAAC+AGG 0.417457 2_1:+77776196 Msa0227130:CDS
GGAAAATTGGCCTCTTCATT+CGG 0.420212 2_1:+77782793 Msa0227130:CDS
TCCCACCAATTCTCCATGTT+AGG 0.422680 2_1:-77773895 None:intergenic
AGAGTAGAAGTAATAATAAG+AGG 0.424376 2_1:+77783263 Msa0227130:CDS
TGTAGTAGTAGCTGGTATTA+TGG 0.433106 2_1:-77783209 None:intergenic
TTCAGGGAGGAGCACATGAT+TGG 0.447101 2_1:-77775874 None:intergenic
AAATGACACAAATTCTGATC+AGG 0.450921 2_1:+77785433 Msa0227130:CDS
TGCCAATGGCCTCCACTTCA+GGG 0.452486 2_1:-77775890 None:intergenic
AAACATTACCTTAGCAATGA+TGG 0.455229 2_1:-77776063 None:intergenic
AAGGAGAGGGATCGTGAAGC+TGG 0.456447 2_1:-77773783 None:intergenic
CTCCCTGAAGTGGAGGCCAT+TGG 0.457623 2_1:+77775888 Msa0227130:CDS
AGGAGGGTATCTGTATTTAT+CGG 0.461686 2_1:-77773857 None:intergenic
AATAATTGTGTGTGAAGGAG+AGG 0.462148 2_1:-77773797 None:intergenic
CTACACATGGAAAGAATAAG+AGG 0.462322 2_1:+77774145 Msa0227130:CDS
TTCTACTCTTCTTTCCACTT+TGG 0.465419 2_1:-77783315 None:intergenic
GATTCTGGTGTAGTAGTAGC+TGG 0.465607 2_1:-77783217 None:intergenic
ATTATTACCTTCTTCAAGCC+AGG 0.465921 2_1:-77783427 None:intergenic
AGAACGTGTGAAGGAGTTAG+AGG 0.469057 2_1:+77785337 Msa0227130:CDS
TGTTGGATGCTTCTGATTGA+AGG 0.471742 2_1:-77774082 None:intergenic
TTAACATCAGGGAGTGATGA+TGG 0.473088 2_1:-77785467 None:intergenic
AAGGAGAGAATGAATGTCCT+TGG 0.473742 2_1:-77783175 None:intergenic
ATCAGAATTTGTGTCATTTG+AGG 0.475191 2_1:-77785429 None:intergenic
CTTCTCTGATTCTATGCCAA+TGG 0.479471 2_1:-77775904 None:intergenic
TCCAAATGGAAGCACACTGC+TGG 0.484948 2_1:-77776021 None:intergenic
TTAATATCTATAGGATATGA+AGG 0.498841 2_1:+77774047 Msa0227130:intron
TAAAGAACGCATATCAATGC+TGG 0.499426 2_1:+77775758 Msa0227130:CDS
GATTGCTTCACCAAGTATAG+AGG 0.505445 2_1:-77785294 None:intergenic
CTGTTACATATTCTGGAAGC+AGG 0.506427 2_1:+77783077 Msa0227130:CDS
GGTATAGATAAAGTAAAAGG+AGG 0.507865 2_1:-77773874 None:intergenic
AGCAATTGCTTCTGAATATG+AGG 0.510804 2_1:+77787231 Msa0227130:CDS
GGAGGGTATCTGTATTTATC+GGG 0.511314 2_1:-77773856 None:intergenic
TGATGTTAAAGCAAGAGTAT+TGG 0.512297 2_1:+77785481 Msa0227130:CDS
AGCAATGATGGTAATGTTGA+GGG 0.515073 2_1:-77776051 None:intergenic
CCTAATAATGCTGCTACACA+TGG 0.515165 2_1:+77774132 Msa0227130:CDS
TACTATTCCTGGCTTGAAGA+AGG 0.517604 2_1:+77783420 Msa0227130:CDS
CAAAATGAAGGTGAATGATC+TGG 0.518407 2_1:+77787196 Msa0227130:CDS
CCAAGAGTTGAATTCCCAAA+AGG 0.521924 2_1:-77785614 None:intergenic
GTTATCATCTTCTAGTGAGA+TGG 0.524407 2_1:+77783099 Msa0227130:CDS
TACCTAACATGGAGAATTGG+TGG 0.525198 2_1:+77773893 Msa0227130:exon
TTTACTCGTGGCCTCTGAGC+TGG 0.525686 2_1:+77781738 Msa0227130:CDS
TCTTCTCATGGAGCAATCAT+GGG 0.526288 2_1:+77782772 Msa0227130:CDS
ATGGACGGCTCAGATAGCTC+AGG 0.532196 2_1:+77783118 Msa0227130:CDS
TATGATACCCGGCTTGAAGA+AGG 0.532421 2_1:+77774257 Msa0227130:CDS
TACTTTATCTATACCTAACA+TGG 0.533893 2_1:+77773882 Msa0227130:exon
AAATGGAAGCACACTGCTGG+TGG 0.542174 2_1:-77776018 None:intergenic
GCACTTTCGGCTATGATACC+CGG 0.547609 2_1:+77774246 Msa0227130:CDS
TCATGTGCTCCTCCCTGAAG+TGG 0.548063 2_1:+77775878 Msa0227130:CDS
GGAACTGACCTTCTTCAAGC+CGG 0.556400 2_1:-77774265 None:intergenic
CCCAAAAGGAAATACACTGC+TGG 0.556531 2_1:-77785600 None:intergenic
TAGCAATGATGGTAATGTTG+AGG 0.557198 2_1:-77776052 None:intergenic
CTTCTGAATATGAGGAGTTG+AGG 0.558111 2_1:+77787239 Msa0227130:CDS
ATGGACAAGACCTCTATACT+TGG 0.562754 2_1:+77785284 Msa0227130:CDS
TAAGAGGGTGAGAAGCTCAT+GGG 0.563045 2_1:+77774161 Msa0227130:CDS
AGAATTTGTGTCATTTGAGG+TGG 0.563133 2_1:-77785426 None:intergenic
AGTGGAAAGAAGAGTAGAAG+TGG 0.563816 2_1:+77783319 Msa0227130:CDS
CAACATTACCATCATTGCTA+AGG 0.570598 2_1:+77776055 Msa0227130:CDS
TGCTCAGGAGACTTTACTCG+TGG 0.571113 2_1:+77781726 Msa0227130:CDS
GTATAGATAAAGTAAAAGGA+GGG 0.576956 2_1:-77773873 None:intergenic
TATTATGGTTGATTTATCAA+AGG 0.577249 2_1:-77783194 None:intergenic
ATAAGAGGGTGAGAAGCTCA+TGG 0.579940 2_1:+77774160 Msa0227130:CDS
ACATGTTGCATATTTGAGGA+TGG 0.580754 2_1:-77787619 None:intergenic
GAACTGACCTTCTTCAAGCC+GGG 0.582458 2_1:-77774264 None:intergenic
ATAATTGTGTGTGAAGGAGA+GGG 0.583451 2_1:-77773796 None:intergenic
ATCAACTGCGAGAAACATGA+AGG 0.584639 2_1:+77775945 Msa0227130:CDS
CATTGAGATCCACTGTGAGA+AGG 0.587275 2_1:+77785517 Msa0227130:CDS
CACTGCTGGTGGAAACATAG+AGG 0.588212 2_1:-77776007 None:intergenic
GCAAAAGCTAGTAACCAAAG+TGG 0.590525 2_1:+77783301 Msa0227130:CDS
ACCTAACATGGAGAATTGGT+GGG 0.590580 2_1:+77773894 Msa0227130:exon
GGAGTGGACGGTGTTGATGA+AGG 0.594219 2_1:-77783154 None:intergenic
TCCGTACTAGTGTATCAAGC+AGG 0.597233 2_1:+77787276 Msa0227130:three_prime_UTR
GTTGATGTAGAGAATATGCA+AGG 0.598569 2_1:+77782986 Msa0227130:CDS
AGTTAGAGGAACGGAACAAG+AGG 0.599418 2_1:+77785351 Msa0227130:CDS
GAGAATGAATGTCCTTGGAG+TGG 0.602643 2_1:-77783170 None:intergenic
TGTGCTCCTCCCTGAAGTGG+AGG 0.603078 2_1:+77775881 Msa0227130:CDS
AGAAGCTCATGGGAGATACA+AGG 0.603853 2_1:+77774171 Msa0227130:CDS
ATTCAGAAGCAATTGCTGCA+TGG 0.604569 2_1:-77787225 None:intergenic
CAAATATGCAACATGTTCTG+AGG 0.605227 2_1:+77787626 Msa0227130:three_prime_UTR
GCCTGCTTGATACACTAGTA+CGG 0.607393 2_1:-77787277 None:intergenic
GGGTGACGAGTACAAAATGA+AGG 0.610842 2_1:+77787184 Msa0227130:CDS
ATACTCTTGCTTTAACATCA+GGG 0.612633 2_1:-77785478 None:intergenic
CTTGATACACTAGTACGGAT+CGG 0.613872 2_1:-77787272 None:intergenic
AGTGTTATTACCGAATGAAG+AGG 0.617526 2_1:-77782803 None:intergenic
CATCAACACCGTCCACTCCA+AGG 0.620000 2_1:+77783158 Msa0227130:CDS
ATGAATGTCCTTGGAGTGGA+CGG 0.625719 2_1:-77783166 None:intergenic
ACTACTTCAAGAACGTGTGA+AGG 0.641075 2_1:+77785328 Msa0227130:CDS
CGCATATCTTACCAGCTCAG+AGG 0.645098 2_1:-77781749 None:intergenic
GAATCCAAATTATCATTACG+TGG 0.646914 2_1:-77775852 None:intergenic
CATTGGCATAGAATCAGAGA+AGG 0.647651 2_1:+77775905 Msa0227130:CDS
TACACATGGAAAGAATAAGA+GGG 0.651853 2_1:+77774146 Msa0227130:CDS
TAATATCTATAGGATATGAA+GGG 0.651855 2_1:+77774048 Msa0227130:intron
TTTGGAAAGGACATTCAACA+TGG 0.654139 2_1:-77781679 None:intergenic
TGGAGCAACAATGTTATGAG+AGG 0.657981 2_1:+77775778 Msa0227130:CDS
TCATCTTCTAGTGAGATGGA+CGG 0.664945 2_1:+77783103 Msa0227130:CDS
TGGACGGCTCAGATAGCTCA+GGG 0.674267 2_1:+77783119 Msa0227130:CDS
GTGTGAAGGAGTTAGAGGAA+CGG 0.690708 2_1:+77785342 Msa0227130:CDS
TTTACTTGTATAGATAGACA+AGG 0.695353 2_1:+77775695 Msa0227130:intron
TTGATGTAGAGAATATGCAA+GGG 0.725229 2_1:+77782987 Msa0227130:CDS
CAATGGCCTCCACTTCAGGG+AGG 0.758935 2_1:-77775887 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAATAATAAATTAACAC+AGG + chr2_1:77775307-77775326 Msa0227130:intron 10.0%
!!! AAATTTTTTAATAGAGATTA+TGG - chr2_1:77775823-77775842 None:intergenic 10.0%
!! TTCAAAAATGAAAAAAAAAA+TGG - chr2_1:77777421-77777440 None:intergenic 10.0%
!!! ATTTTTTTTTTCATTTTTGA+AGG + chr2_1:77777420-77777439 Msa0227130:intron 10.0%
!!! TTTTTTTTTTCATTTTTGAA+GGG + chr2_1:77777421-77777440 Msa0227130:intron 10.0%
!!! TTTAAAATTGTATTAAAATC+CGG + chr2_1:77778439-77778458 Msa0227130:intron 10.0%
!!! AAATAAATAGATTTTATAGT+GGG - chr2_1:77779060-77779079 None:intergenic 10.0%
!! TATAAAATCTATTTATTTGT+GGG + chr2_1:77779062-77779081 Msa0227130:intron 10.0%
!! AAGAAAAAAATTATAATATG+GGG - chr2_1:77779098-77779117 None:intergenic 10.0%
!!! TATTTAAGCTTTTTTTTTTT+CGG + chr2_1:77781383-77781402 Msa0227130:intron 10.0%
!! TTAATTCAAAAATTAAATCA+GGG - chr2_1:77782942-77782961 None:intergenic 10.0%
!! TGTTTACTAAAAATAAATAA+AGG + chr2_1:77784902-77784921 Msa0227130:intron 10.0%
!!! TAGTTCTTTTTTTTTTTTTT+TGG - chr2_1:77785188-77785207 None:intergenic 10.0%
!!! ATTTTATTTTAGTTAAACTA+AGG + chr2_1:77786512-77786531 Msa0227130:intron 10.0%
!!! AATTATTTTCTTTTTTATTG+TGG - chr2_1:77786587-77786606 None:intergenic 10.0%
!!! TAATAATATTTTTAATGAGA+TGG + chr2_1:77786689-77786708 Msa0227130:intron 10.0%
!!! AATAATATTTTTAATGAGAT+GGG + chr2_1:77786690-77786709 Msa0227130:intron 10.0%
!!! ATTATTTTAGATTAAAAAGA+TGG - chr2_1:77787358-77787377 None:intergenic 10.0%
!!! ATCTTTTTAATCTAAAATAA+TGG + chr2_1:77787357-77787376 Msa0227130:three_prime_UTR 10.0%
!!! TTTCAAATTTTTACATAAAA+AGG - chr2_1:77787484-77787503 None:intergenic 10.0%
!!! ATTAACTTTTTATAATGGAT+AGG + chr2_1:77774387-77774406 Msa0227130:intron 15.0%
!! AGAAAAAATTAAAGTTGTAT+TGG + chr2_1:77774613-77774632 Msa0227130:intron 15.0%
!!! CTTTTTTTGACAATATTTAA+TGG + chr2_1:77774726-77774745 Msa0227130:intron 15.0%
!! TACAATATAATTGAATTACT+TGG - chr2_1:77774782-77774801 None:intergenic 15.0%
!!! ATAATTAAGCTTGTTAATTT+TGG - chr2_1:77775173-77775192 None:intergenic 15.0%
!! TTGATAAAATGTTAATTACA+TGG + chr2_1:77776127-77776146 Msa0227130:intron 15.0%
!!! TATTTTGTGACTAAATTAAA+GGG - chr2_1:77776579-77776598 None:intergenic 15.0%
!!! ATATTTTGTGACTAAATTAA+AGG - chr2_1:77776580-77776599 None:intergenic 15.0%
!! TTATTGTTTAAGAATCTATT+AGG + chr2_1:77776748-77776767 Msa0227130:intron 15.0%
!!! TTTTTTATTTGTATTCTTTC+AGG + chr2_1:77777254-77777273 Msa0227130:intron 15.0%
!!! TTTTTCTTATATACCTTTAA+GGG - chr2_1:77778024-77778043 None:intergenic 15.0%
!!! TAGAAATTTACCTTTTTTTA+AGG + chr2_1:77778186-77778205 Msa0227130:intron 15.0%
!!! AAATTACATTTTTTTAGACT+TGG - chr2_1:77778305-77778324 None:intergenic 15.0%
!!! GTCTATATTAGTATTTTTTT+GGG - chr2_1:77778679-77778698 None:intergenic 15.0%
!!! TGTCTATATTAGTATTTTTT+TGG - chr2_1:77778680-77778699 None:intergenic 15.0%
!! TAGAGATTTATTTAGTAAAA+AGG - chr2_1:77778904-77778923 None:intergenic 15.0%
!!! AAATAATTCTTTTCAATTAG+GGG - chr2_1:77779028-77779047 None:intergenic 15.0%
!!! CAAATAATTCTTTTCAATTA+GGG - chr2_1:77779029-77779048 None:intergenic 15.0%
!! CTAATTGAAAAGAATTATTT+GGG + chr2_1:77779028-77779047 Msa0227130:intron 15.0%
!! TAATTGAAAAGAATTATTTG+GGG + chr2_1:77779029-77779048 Msa0227130:intron 15.0%
!!! CAAATAAATAGATTTTATAG+TGG - chr2_1:77779061-77779080 None:intergenic 15.0%
!! CTATAAAATCTATTTATTTG+TGG + chr2_1:77779061-77779080 Msa0227130:intron 15.0%
!!! GTTGTTTTTTAAAATGAAAT+CGG - chr2_1:77780516-77780535 None:intergenic 15.0%
!!! TTTTGTATAAATAAGTTGTT+TGG - chr2_1:77780207-77780226 None:intergenic 15.0%
!!! GTTGTTTTTTAAAATGAAAT+CGG - chr2_1:77780516-77780535 None:intergenic 15.0%
!!! TTTTGTATAAATAAGTTGTT+TGG + chr2_1:77780207-77780226 Msa0227130:intron 15.0%
!!! GTTGTTTTTTAAAATGAAAT+CGG + chr2_1:77780516-77780535 Msa0227130:intron 15.0%
!!! GTTGTTTTTTAAAATGAAAT+CGG + chr2_1:77780516-77780535 Msa0227130:intron 15.0%
!!! TTTTGTATAAATAAGTTGTT+TGG + chr2_1:77780207-77780226 Msa0227130:intron 15.0%
!!! GTTGTTTTTTAAAATGAAAT+CGG + chr2_1:77780516-77780535 Msa0227130:intron 15.0%
!!! AAAATGTTCATAGAAATTTT+GGG + chr2_1:77781432-77781451 Msa0227130:intron 15.0%
!! TAAAAATCCATAAGATTAAA+AGG - chr2_1:77781498-77781517 None:intergenic 15.0%
!! AAAAACAATTATTGTAATTG+TGG - chr2_1:77782547-77782566 None:intergenic 15.0%
!! GTTAATTCAAAAATTAAATC+AGG - chr2_1:77782943-77782962 None:intergenic 15.0%
!! TTAACTGTTATTATTACAAT+AGG + chr2_1:77782958-77782977 Msa0227130:intron 15.0%
!!! TAATAACACAAATACAATTT+TGG - chr2_1:77783656-77783675 None:intergenic 15.0%
!!! ATAAGCAAATTTAACTTTTT+AGG - chr2_1:77784327-77784346 None:intergenic 15.0%
!!! GAATAATTTTGTTTTTTTGA+AGG + chr2_1:77784689-77784708 Msa0227130:intron 15.0%
!! TACTAAAAATAAATAAAGGA+TGG + chr2_1:77784906-77784925 Msa0227130:intron 15.0%
!! TATTTAATAATTAAATGGGA+TGG - chr2_1:77785728-77785747 None:intergenic 15.0%
!!! CTAAAACAAATTTTTAAATG+AGG - chr2_1:77785962-77785981 None:intergenic 15.0%
!! TGATAAATAGCATTTATTAA+CGG + chr2_1:77786294-77786313 Msa0227130:intron 15.0%
!! ACATATATGTATATATAGTA+AGG - chr2_1:77786489-77786508 None:intergenic 15.0%
!!! TTTTATTTTTTGTTGATAAG+TGG - chr2_1:77786555-77786574 None:intergenic 15.0%
!!! AATTTATTTTTTACACATTG+TGG - chr2_1:77786777-77786796 None:intergenic 15.0%
!!! TTATGTAAAAATTTGAAATG+TGG + chr2_1:77787486-77787505 Msa0227130:three_prime_UTR 15.0%
!!! TATGTAAAAATTTGAAATGT+GGG + chr2_1:77787487-77787506 Msa0227130:three_prime_UTR 15.0%
!! AAAAAAATAATTGTGTGTGA+AGG - chr2_1:77773805-77773824 None:intergenic 20.0%
!! TTAGGTATAGATAAAGTAAA+AGG - chr2_1:77773880-77773899 None:intergenic 20.0%
!! TATAGATATTAAACACAACA+AGG - chr2_1:77774039-77774058 None:intergenic 20.0%
!! TTGTTGTGTTTAATATCTAT+AGG + chr2_1:77774038-77774057 Msa0227130:intron 20.0%
!! TTAATATCTATAGGATATGA+AGG + chr2_1:77774047-77774066 Msa0227130:intron 20.0%
!! TAATATCTATAGGATATGAA+GGG + chr2_1:77774048-77774067 Msa0227130:intron 20.0%
!! AAACATGGAAATACTAAATA+TGG + chr2_1:77774343-77774362 Msa0227130:intron 20.0%
!! TTGTAAGATGTTTAAATAGT+GGG - chr2_1:77774825-77774844 None:intergenic 20.0%
!! TTTGTAAGATGTTTAAATAG+TGG - chr2_1:77774826-77774845 None:intergenic 20.0%
!! ATTAATTTAGTTGAGATACA+TGG - chr2_1:77775019-77775038 None:intergenic 20.0%
!!! ATTTTTAGTATAGTCATTAG+AGG + chr2_1:77775102-77775121 Msa0227130:intron 20.0%
!! GACATAAAATAAATTAACAC+AGG + chr2_1:77775237-77775256 Msa0227130:intron 20.0%
!! AAATAAAGAGTGAGAATAAA+AGG + chr2_1:77775505-77775524 Msa0227130:intron 20.0%
!! AATAAAGAGTGAGAATAAAA+GGG + chr2_1:77775506-77775525 Msa0227130:intron 20.0%
!!! TTCAAGTATTTTTGTTGATA+AGG + chr2_1:77775557-77775576 Msa0227130:intron 20.0%
!!! TTTTTACACTCTTAAGTTTT+AGG + chr2_1:77775625-77775644 Msa0227130:intron 20.0%
!!! TTAATTACATGGATTTTATG+TGG + chr2_1:77776138-77776157 Msa0227130:intron 20.0%
!! CTCAAAATATAAGCAAAAAT+TGG + chr2_1:77776345-77776364 Msa0227130:intron 20.0%
!!! ACCAATTTTTGCTTATATTT+TGG + chr2_1:77776426-77776445 Msa0227130:intron 20.0%
!!! CCAATTTTTGCTTATATTTT+GGG + chr2_1:77776427-77776446 Msa0227130:intron 20.0%
!! TAAAGGGAAAATGATAATTT+AGG - chr2_1:77776563-77776582 None:intergenic 20.0%
!!! AGTTTTAGTTATTAAGATCT+CGG - chr2_1:77776655-77776674 None:intergenic 20.0%
!! CCAATAAAATTGTTTATGAT+AGG - chr2_1:77776832-77776851 None:intergenic 20.0%
!!! CCTATCATAAACAATTTTAT+TGG + chr2_1:77776829-77776848 Msa0227130:intron 20.0%
!! ACAAATTTGTAGGTTATTAT+TGG - chr2_1:77777301-77777320 None:intergenic 20.0%
!! CAAAATGATGACATTATTAA+CGG - chr2_1:77777398-77777417 None:intergenic 20.0%
!! TATAATTCTTGAATTTCTTG+TGG + chr2_1:77777525-77777544 Msa0227130:intron 20.0%
!! AGAAAATAACATAACCTATA+CGG - chr2_1:77777790-77777809 None:intergenic 20.0%
!!! ATTATCATACTACTTTTATC+AGG - chr2_1:77777911-77777930 None:intergenic 20.0%
!!! GTTTTTCTTATATACCTTTA+AGG - chr2_1:77778025-77778044 None:intergenic 20.0%
!! TTAACAAATTGTCCTATTAT+TGG - chr2_1:77778077-77778096 None:intergenic 20.0%
!!! AAAAAAATATTGGGTTTGTT+TGG - chr2_1:77778120-77778139 None:intergenic 20.0%
!! TGAATTTCTTCCTTAAAAAA+AGG - chr2_1:77778199-77778218 None:intergenic 20.0%
!! ATCATAATTCGATGTAAAAT+TGG + chr2_1:77778830-77778849 Msa0227130:intron 20.0%
!! AGATTTATTTAGTAAAAAGG+AGG - chr2_1:77778901-77778920 None:intergenic 20.0%
!!! AATAATTCTTTTCAATTAGG+GGG - chr2_1:77779027-77779046 None:intergenic 20.0%
!!! CCAAATAATTCTTTTCAATT+AGG - chr2_1:77779030-77779049 None:intergenic 20.0%
!! CCTAATTGAAAAGAATTATT+TGG + chr2_1:77779027-77779046 Msa0227130:intron 20.0%
!!! AATAAGTTGTTTTGAATAAG+CGG - chr2_1:77780383-77780402 None:intergenic 20.0%
!!! GTTGTTTTTTAAAATGAGAT+CGG - chr2_1:77779241-77779260 None:intergenic 20.0%
!!! AACTGTTTTTGCAAAAAATA+AGG - chr2_1:77780053-77780072 None:intergenic 20.0%
!!! TAAATAAGCTGTTTTGAATA+TGG - chr2_1:77780295-77780314 None:intergenic 20.0%
!!! GAAAATGTTCATAGAAATTT+TGG + chr2_1:77781431-77781450 Msa0227130:intron 20.0%
!!! AAATGTTCATAGAAATTTTG+GGG + chr2_1:77781433-77781452 Msa0227130:intron 20.0%
!! AATTTAAATATGCATTCCAT+TGG + chr2_1:77781949-77781968 Msa0227130:intron 20.0%
!! ATAAATGCAATGTATCATAA+TGG - chr2_1:77782624-77782643 None:intergenic 20.0%
!! TTGTTGATCATAATGATTTA+CGG - chr2_1:77782882-77782901 None:intergenic 20.0%
!!! TATTATGGTTGATTTATCAA+AGG - chr2_1:77783197-77783216 None:intergenic 20.0%
!! TTATCAAATAACCTAGAAAT+TGG + chr2_1:77783537-77783556 Msa0227130:intron 20.0%
!! AAATTCACTTAGGATAAATT+AGG + chr2_1:77783560-77783579 Msa0227130:intron 20.0%
!!! GTGATTTTCTTAATTACTAA+TGG - chr2_1:77784169-77784188 None:intergenic 20.0%
!!! AGTCAAATTTGCTTATATTT+AGG - chr2_1:77784234-77784253 None:intergenic 20.0%
!! ATACTCTATATTATTACAAG+TGG + chr2_1:77784640-77784659 Msa0227130:intron 20.0%
!!! TTTTATTTTTTCACTACGTA+TGG - chr2_1:77784755-77784774 None:intergenic 20.0%
!! AATAAAAATTGATGTTCTGT+CGG + chr2_1:77784783-77784802 Msa0227130:intron 20.0%
!! TGCATAAATTAATTGATAGA+TGG + chr2_1:77785265-77785284 Msa0227130:intron 20.0%
!!! TTTTCTTTTTTTACAAGTTG+TGG - chr2_1:77786805-77786824 None:intergenic 20.0%
!!! TTTGTTTTCAGTTTAGAAAT+AGG + chr2_1:77787557-77787576 Msa0227130:three_prime_UTR 20.0%
!!! ACAAAATGTCTTTTATAAAG+AGG - chr2_1:77787680-77787699 None:intergenic 20.0%
! GTATAGATAAAGTAAAAGGA+GGG - chr2_1:77773876-77773895 None:intergenic 25.0%
! TACTTTATCTATACCTAACA+TGG + chr2_1:77773882-77773901 Msa0227130:exon 25.0%
!!! GTTTTTTGTAGATCAAAACA+TGG + chr2_1:77774328-77774347 Msa0227130:intron 25.0%
!! CTAAATATGGATTAAACATG+AGG + chr2_1:77774356-77774375 Msa0227130:intron 25.0%
!!! TGTCTTGTTCTTTTAAAGTA+AGG - chr2_1:77774525-77774544 None:intergenic 25.0%
!! AAAAGTTGGAGTATTTATTG+AGG + chr2_1:77774579-77774598 Msa0227130:intron 25.0%
!! AAAGTTGGAGTATTTATTGA+GGG + chr2_1:77774580-77774599 Msa0227130:intron 25.0%
!!! AAGTGACAATCATTTTGAAA+CGG + chr2_1:77774678-77774697 Msa0227130:intron 25.0%
! TTGTATTTAGTAGTGATACA+TGG + chr2_1:77774797-77774816 Msa0227130:intron 25.0%
! TGTAAGATGTTTAAATAGTG+GGG - chr2_1:77774824-77774843 None:intergenic 25.0%
! TACAAGATTAATTCAGTTCA+TGG + chr2_1:77774897-77774916 Msa0227130:intron 25.0%
!! TTGGCTTATCAATGTATTTT+GGG - chr2_1:77775063-77775082 None:intergenic 25.0%
!!! TTTGGCTTATCAATGTATTT+TGG - chr2_1:77775064-77775083 None:intergenic 25.0%
! AATACATTGATAAGCCAAAA+AGG + chr2_1:77775065-77775084 Msa0227130:intron 25.0%
!! AGATTTTCTTTGTACCTTTT+TGG - chr2_1:77775082-77775101 None:intergenic 25.0%
! TTTACTTGTATAGATAGACA+AGG + chr2_1:77775695-77775714 Msa0227130:intron 25.0%
! AAGTTATAGTTCTTAAGAGT+TGG + chr2_1:77776272-77776291 Msa0227130:intron 25.0%
! TCAACGAAAGTTAATGTATT+TGG + chr2_1:77776368-77776387 Msa0227130:intron 25.0%
! TCAACAAAAGCTAATGTATT+TGG - chr2_1:77776407-77776426 None:intergenic 25.0%
! CCCAAAATATAAGCAAAAAT+TGG - chr2_1:77776430-77776449 None:intergenic 25.0%
!!! TTTTTGCTTATATTTTGGGA+CGG + chr2_1:77776431-77776450 Msa0227130:intron 25.0%
! TGTAAATGTTGCAAAAGAAT+AGG - chr2_1:77776987-77777006 None:intergenic 25.0%
! ATAGCAAAAAATGTTGTCAA+TGG + chr2_1:77777013-77777032 Msa0227130:intron 25.0%
! TAGCAAAAAATGTTGTCAAT+GGG + chr2_1:77777014-77777033 Msa0227130:intron 25.0%
! AATTTGTAGGTTATTATTGG+AGG - chr2_1:77777298-77777317 None:intergenic 25.0%
! TATGAAGAAGACAAATTTGT+AGG - chr2_1:77777311-77777330 None:intergenic 25.0%
! CAAATTTGTCTTCTTCATAA+TGG + chr2_1:77777312-77777331 Msa0227130:intron 25.0%
!!! AGGCAATTTTAATTTACTAG+CGG - chr2_1:77777347-77777366 None:intergenic 25.0%
! CTAGTAAATTAAAATTGCCT+TGG + chr2_1:77777347-77777366 Msa0227130:intron 25.0%
!! GTTGAAGAAAAGAATTGTTT+TGG + chr2_1:77777754-77777773 Msa0227130:intron 25.0%
!!! AAGAATTGTTTTGGCAATAT+TGG + chr2_1:77777763-77777782 Msa0227130:intron 25.0%
! TGTATTTATGTTGGCATAAA+TGG + chr2_1:77777839-77777858 Msa0227130:intron 25.0%
! ATAATCAATCAAGTGAGAAA+TGG + chr2_1:77777926-77777945 Msa0227130:intron 25.0%
! TAATCAATCAAGTGAGAAAT+GGG + chr2_1:77777927-77777946 Msa0227130:intron 25.0%
!! AAAGGTATATAAGAAAAACG+TGG + chr2_1:77778026-77778045 Msa0227130:intron 25.0%
! AAGGTATATAAGAAAAACGT+GGG + chr2_1:77778027-77778046 Msa0227130:intron 25.0%
! GGTGATACGAAAAAAATATT+GGG - chr2_1:77778129-77778148 None:intergenic 25.0%
! TGGTGATACGAAAAAAATAT+TGG - chr2_1:77778130-77778149 None:intergenic 25.0%
!! GTTATCGATTGTTAACAAAA+TGG - chr2_1:77778150-77778169 None:intergenic 25.0%
! GAAATTCACCTTCTAATTAT+TGG + chr2_1:77778211-77778230 Msa0227130:intron 25.0%
! TTGATTAAGATGATATGTTC+CGG - chr2_1:77778461-77778480 None:intergenic 25.0%
!! TTTTATCGCATTTACGTATT+TGG - chr2_1:77778499-77778518 None:intergenic 25.0%
!!! TTAAGTGGGCTTTAAAATTT+GGG - chr2_1:77778973-77778992 None:intergenic 25.0%
!!! TTTAAGTGGGCTTTAAAATT+TGG - chr2_1:77778974-77778993 None:intergenic 25.0%
!!! TTATAATATGGGGCTTTATT+AGG - chr2_1:77779088-77779107 None:intergenic 25.0%
!! TACTTTTCTATACGTCTTTT+GGG - chr2_1:77781581-77781600 None:intergenic 25.0%
! AGAATTTAGAGAACCAAAAA+GGG - chr2_1:77781832-77781851 None:intergenic 25.0%
! AAGAATTTAGAGAACCAAAA+AGG - chr2_1:77781833-77781852 None:intergenic 25.0%
! CTTGATTAGTACTAGTAATT+TGG - chr2_1:77782016-77782035 None:intergenic 25.0%
! GTTATTATTACAATAGGAAG+TGG + chr2_1:77782964-77782983 Msa0227130:intron 25.0%
! AGAGTAGAAGTAATAATAAG+AGG + chr2_1:77783263-77783282 Msa0227130:CDS 25.0%
! AAGTAATAATAAGAGGAGTT+TGG + chr2_1:77783270-77783289 Msa0227130:CDS 25.0%
! TAAGTGAATTTCCAATTTCT+AGG - chr2_1:77783551-77783570 None:intergenic 25.0%
! TAGAAATTGGAAATTCACTT+AGG + chr2_1:77783550-77783569 Msa0227130:intron 25.0%
!! TACTAAAATGTCCTTTTACA+TGG - chr2_1:77783736-77783755 None:intergenic 25.0%
! TTTATTATGAACTCAGAGTT+TGG + chr2_1:77784073-77784092 Msa0227130:intron 25.0%
!! AATTTGCTTATATTTAGGAC+CGG - chr2_1:77784229-77784248 None:intergenic 25.0%
! CATTCAATTAATGATGTATG+TGG + chr2_1:77784263-77784282 Msa0227130:intron 25.0%
! CATTCAATTAATGATGTATG+TGG - chr2_1:77784263-77784282 None:intergenic 25.0%
! TCTTGAATTGGATTTGAATA+TGG - chr2_1:77784578-77784597 None:intergenic 25.0%
! TAAGACAACAAAACAAACAA+TGG + chr2_1:77784958-77784977 Msa0227130:intron 25.0%
! AAGTAAAACAACATCAAACT+TGG + chr2_1:77784993-77785012 Msa0227130:intron 25.0%
!!! TGATATTGACTTCTTTTCTT+TGG + chr2_1:77785133-77785152 Msa0227130:intron 25.0%
!!! GATATTGACTTCTTTTCTTT+GGG + chr2_1:77785134-77785153 Msa0227130:intron 25.0%
!! TTTTAGACTTAGAAATGTGT+TGG + chr2_1:77785976-77785995 Msa0227130:intron 25.0%
!! AAAGTACTCTAAATCATAGT+AGG - chr2_1:77786002-77786021 None:intergenic 25.0%
!!! CTCATGATCAACTTATTTTT+AGG - chr2_1:77786080-77786099 None:intergenic 25.0%
! CGAGTAATAAAAAATTGATC+CGG + chr2_1:77786107-77786126 Msa0227130:intron 25.0%
! CAAGTTGTTTAAAAGTTCTT+CGG - chr2_1:77786181-77786200 None:intergenic 25.0%
! AGTAGATTTGATGTATTGTT+TGG + chr2_1:77786397-77786416 Msa0227130:intron 25.0%
! AAGTGGAAAGTGAATTTATT+TGG - chr2_1:77786538-77786557 None:intergenic 25.0%
!!! TATTTTTTACACATTGTGGT+TGG - chr2_1:77786773-77786792 None:intergenic 25.0%
! GAACGAAACATAATCATAAT+TGG - chr2_1:77787600-77787619 None:intergenic 25.0%
GGTATAGATAAAGTAAAAGG+AGG - chr2_1:77773877-77773896 None:intergenic 30.0%
GAACAATGTCCTATTATTGT+TGG - chr2_1:77774102-77774121 None:intergenic 30.0%
TACACATGGAAAGAATAAGA+GGG + chr2_1:77774146-77774165 Msa0227130:CDS 30.0%
ACATAATGTCAGAGAGAAAA+AGG + chr2_1:77774196-77774215 Msa0227130:CDS 30.0%
GTATATATTGAAGAAGAAGC+AGG - chr2_1:77774289-77774308 None:intergenic 30.0%
GTATTTATTGAGGGTAAAGT+TGG + chr2_1:77774589-77774608 Msa0227130:intron 30.0%
! TAAGTTTGAGTTCTTATGCT+TGG - chr2_1:77775147-77775166 None:intergenic 30.0%
TTTGTTACTCACATTTACAG+AGG - chr2_1:77775213-77775232 None:intergenic 30.0%
GTAAATGTGAGTAACAAAGA+AGG + chr2_1:77775215-77775234 Msa0227130:intron 30.0%
ATTATGACATGTGACTTATG+AGG + chr2_1:77775594-77775613 Msa0227130:intron 30.0%
TCATCCACGTAATGATAATT+TGG + chr2_1:77775848-77775867 Msa0227130:CDS 30.0%
GAATCCAAATTATCATTACG+TGG - chr2_1:77775855-77775874 None:intergenic 30.0%
!!! TTGAGGGTATTTTTTCCAAA+TGG - chr2_1:77776038-77776057 None:intergenic 30.0%
AAACATTACCTTAGCAATGA+TGG - chr2_1:77776066-77776085 None:intergenic 30.0%
! ATTGATGACAAAGTTGAAAC+AGG + chr2_1:77776196-77776215 Msa0227130:CDS 30.0%
!!! TGCTTATATTTTGAGACAGA+GGG - chr2_1:77776340-77776359 None:intergenic 30.0%
!!! TTGCTTATATTTTGAGACAG+AGG - chr2_1:77776341-77776360 None:intergenic 30.0%
! TCAAATGATAGTGATAGTGT+TGG + chr2_1:77776710-77776729 Msa0227130:intron 30.0%
CTTACTCAAATCTGTATAAG+AGG - chr2_1:77776795-77776814 None:intergenic 30.0%
!! TATCTTTTTGTTTGTGTGTG+TGG - chr2_1:77776869-77776888 None:intergenic 30.0%
!! AAAGCTAAAAAGCATTGTCA+AGG + chr2_1:77777057-77777076 Msa0227130:intron 30.0%
!! AAGCTAAAAAGCATTGTCAA+GGG + chr2_1:77777058-77777077 Msa0227130:intron 30.0%
!! ATCGACAACTTGTTTTTCAA+GGG + chr2_1:77777179-77777198 Msa0227130:intron 30.0%
AATATTAGTTGTCGTCTTAC+TGG - chr2_1:77777232-77777251 None:intergenic 30.0%
ATTTGTCTTCTTCATAATGG+TGG + chr2_1:77777315-77777334 Msa0227130:intron 30.0%
!! TTGGCTTCTAAAATTAGTGA+GGG + chr2_1:77777366-77777385 Msa0227130:intron 30.0%
! TTTTCTTCTTGATTTCTCTC+TGG + chr2_1:77777804-77777823 Msa0227130:intron 30.0%
!! CAAGTTGGTTGTATTTATGT+TGG + chr2_1:77777830-77777849 Msa0227130:intron 30.0%
! AAGTTTGAGACTGAAAAATC+CGG - chr2_1:77777874-77777893 None:intergenic 30.0%
!! TCATACTACTTTTATCAGGT+TGG - chr2_1:77777907-77777926 None:intergenic 30.0%
AATCAATCAAGTGAGAAATG+GGG + chr2_1:77777928-77777947 Msa0227130:intron 30.0%
TATATAAGAAAAACGTGGGA+AGG + chr2_1:77778031-77778050 Msa0227130:intron 30.0%
TAGACACTCCAATAATTAGA+AGG - chr2_1:77778222-77778241 None:intergenic 30.0%
! TTCTAATTATTGGAGTGTCT+AGG + chr2_1:77778221-77778240 Msa0227130:intron 30.0%
!!! ATTTTTTTAGACTTGGTCTC+GGG - chr2_1:77778298-77778317 None:intergenic 30.0%
!!! CATTTTTTTAGACTTGGTCT+CGG - chr2_1:77778299-77778318 None:intergenic 30.0%
GTCATTGAATCAAAATCAGA+GGG + chr2_1:77778377-77778396 Msa0227130:intron 30.0%
TCATCTTAATCAAACGAATG+TGG + chr2_1:77778468-77778487 Msa0227130:intron 30.0%
ATCGAATTATGATAACTCGT+AGG - chr2_1:77778823-77778842 None:intergenic 30.0%
ACCAAAATTCCTCAAGTTTA+TGG + chr2_1:77778856-77778875 Msa0227130:intron 30.0%
! ACCATAAACTTGAGGAATTT+TGG - chr2_1:77778860-77778879 None:intergenic 30.0%
ATTATAAGTCCCAAAAGTAG+AGG + chr2_1:77778935-77778954 Msa0227130:intron 30.0%
!! TAAGTGGGCTTTAAAATTTG+GGG - chr2_1:77778972-77778991 None:intergenic 30.0%
!!! AATAGATTTTATAGTGGGCT+TGG - chr2_1:77779055-77779074 None:intergenic 30.0%
TTTGTGCAAAACAGCTTATT+AGG + chr2_1:77779469-77779488 Msa0227130:intron 30.0%
! GATAAGTTGTTTCGAATAAG+CGG - chr2_1:77779945-77779964 None:intergenic 30.0%
! GTACTTTTCTATACGTCTTT+TGG - chr2_1:77781582-77781601 None:intergenic 30.0%
AGAGAAAAAGACGATTGATT+TGG - chr2_1:77781793-77781812 None:intergenic 30.0%
ATACTATGATCCAGTATGAT+TGG - chr2_1:77781928-77781947 None:intergenic 30.0%
! TAGTACTAGTAATTTGGAGT+GGG - chr2_1:77782010-77782029 None:intergenic 30.0%
TTAGTACTAGTAATTTGGAG+TGG - chr2_1:77782011-77782030 None:intergenic 30.0%
TTATTACTAGTAACGCAAGT+CGG - chr2_1:77782065-77782084 None:intergenic 30.0%
!! TCTAGAATTTTGTTAGGCTA+TGG - chr2_1:77782375-77782394 None:intergenic 30.0%
!!! GAGACTTCTAGAATTTTGTT+AGG - chr2_1:77782381-77782400 None:intergenic 30.0%
! GTATTGGTAGGAATCTTATA+TGG - chr2_1:77782427-77782446 None:intergenic 30.0%
GGTATAGCATTATACAATGT+GGG - chr2_1:77782485-77782504 None:intergenic 30.0%
CACATTGTATAATGCTATAC+CGG + chr2_1:77782484-77782503 Msa0227130:intron 30.0%
CAGTCGAAAGTAATTAATGT+TGG + chr2_1:77782650-77782669 Msa0227130:intron 30.0%
! CAAAACACATTTTCTTCTCA+TGG + chr2_1:77782760-77782779 Msa0227130:CDS 30.0%
TTGATGTAGAGAATATGCAA+GGG + chr2_1:77782987-77783006 Msa0227130:CDS 30.0%
TTACTTCTACTCTTTGTTCT+TGG - chr2_1:77783256-77783275 None:intergenic 30.0%
TAGGATAAATTAGGAGATTC+TGG + chr2_1:77783569-77783588 Msa0227130:intron 30.0%
! CTTTTACATGGTGTGTATAA+TGG - chr2_1:77783724-77783743 None:intergenic 30.0%
CATTATACACACCATGTAAA+AGG + chr2_1:77783722-77783741 Msa0227130:intron 30.0%
TATATGTTGACCATCATAGA+TGG - chr2_1:77783844-77783863 None:intergenic 30.0%
GATGTATGTGGTTCATATTA+TGG - chr2_1:77784290-77784309 None:intergenic 30.0%
! TTGCTTATATTTAAGACCGA+AGG + chr2_1:77784339-77784358 Msa0227130:intron 30.0%
! TGCTTATATTTAAGACCGAA+GGG + chr2_1:77784340-77784359 Msa0227130:intron 30.0%
! TTTGTTGTCAGTATCTATGA+AGG - chr2_1:77784450-77784469 None:intergenic 30.0%
TGTTCTGATGAGTTATATCT+TGG - chr2_1:77784547-77784566 None:intergenic 30.0%
AGATTTGGATTCTCTTGAAT+TGG - chr2_1:77784590-77784609 None:intergenic 30.0%
CTCTCTATCACTATAAGATT+TGG - chr2_1:77784605-77784624 None:intergenic 30.0%
!!! TGTTGTTTTACTTCTCATCT+TGG - chr2_1:77784986-77785005 None:intergenic 30.0%
!! CTTTAAGATAGTAGTAGTTG+AGG - chr2_1:77785221-77785240 None:intergenic 30.0%
!! TTGTACACAAATCACTTTTG+TGG - chr2_1:77785397-77785416 None:intergenic 30.0%
!! ATCAGAATTTGTGTCATTTG+AGG - chr2_1:77785432-77785451 None:intergenic 30.0%
AAATGACACAAATTCTGATC+AGG + chr2_1:77785433-77785452 Msa0227130:CDS 30.0%
ATACTCTTGCTTTAACATCA+GGG - chr2_1:77785481-77785500 None:intergenic 30.0%
AATACTCTTGCTTTAACATC+AGG - chr2_1:77785482-77785501 None:intergenic 30.0%
! TGATGTTAAAGCAAGAGTAT+TGG + chr2_1:77785481-77785500 Msa0227130:CDS 30.0%
CATTCTCTTTCTAATTGAAC+TGG + chr2_1:77785749-77785768 Msa0227130:intron 30.0%
!! GTCATTTTAAAGACAAGTAG+TGG + chr2_1:77785883-77785902 Msa0227130:intron 30.0%
! CTTTTAAACAACTTGAGAGA+CGG + chr2_1:77786186-77786205 Msa0227130:intron 30.0%
!!! TTTTCAAGTACTCTAAGTCA+TGG - chr2_1:77786224-77786243 None:intergenic 30.0%
GTACTTGAAAACTAACAAAC+AGG + chr2_1:77786233-77786252 Msa0227130:intron 30.0%
GCTAATAGTATTACAACTGA+GGG + chr2_1:77786255-77786274 Msa0227130:intron 30.0%
!! AGTGTGTCTGATTTTTGAAA+TGG + chr2_1:77786454-77786473 Msa0227130:intron 30.0%
AAAATCTTGCAAACTTTGAC+AGG + chr2_1:77786722-77786741 Msa0227130:intron 30.0%
AAGAAAAACAGAAGTTCACA+AGG + chr2_1:77786818-77786837 Msa0227130:intron 30.0%
TTTAGGGAAGAAACAAAAAG+TGG + chr2_1:77786902-77786921 Msa0227130:intron 30.0%
TTAGGGAAGAAACAAAAAGT+GGG + chr2_1:77786903-77786922 Msa0227130:intron 30.0%
CTTGTTCAAAGCATACTTTA+GGG - chr2_1:77787056-77787075 None:intergenic 30.0%
TCATGTCATGTCATATTTCA+TGG - chr2_1:77787099-77787118 None:intergenic 30.0%
ATAACATGATTTCTTGCAGA+TGG + chr2_1:77787163-77787182 Msa0227130:intron 30.0%
TAACATGATTTCTTGCAGAT+GGG + chr2_1:77787164-77787183 Msa0227130:intron 30.0%
!! GTACAAGTTTTGTAAGAGAA+AGG + chr2_1:77787390-77787409 Msa0227130:three_prime_UTR 30.0%
TTTACATAAAAAGGCTGCAT+AGG - chr2_1:77787475-77787494 None:intergenic 30.0%
! AAAATTTGAAATGTGGGCTT+CGG + chr2_1:77787493-77787512 Msa0227130:three_prime_UTR 30.0%
ATAATTGTGTGTGAAGGAGA+GGG - chr2_1:77773799-77773818 None:intergenic 35.0%
AATAATTGTGTGTGAAGGAG+AGG - chr2_1:77773800-77773819 None:intergenic 35.0%
TGTATTTATCGGGTGATCTA+TGG - chr2_1:77773849-77773868 None:intergenic 35.0%
!! AGGAGGGTATCTGTATTTAT+CGG - chr2_1:77773860-77773879 None:intergenic 35.0%
CTATACCTAACATGGAGAAT+TGG + chr2_1:77773890-77773909 Msa0227130:exon 35.0%
! GGAGAATTGGTTCTCTAATA+TGG + chr2_1:77773915-77773934 Msa0227130:CDS 35.0%
!! CAGAAGCATCCAACAATAAT+AGG + chr2_1:77774090-77774109 Msa0227130:CDS 35.0%
CTACACATGGAAAGAATAAG+AGG + chr2_1:77774145-77774164 Msa0227130:CDS 35.0%
GAGAAAAAGGAGACAAGAAA+TGG + chr2_1:77774209-77774228 Msa0227130:CDS 35.0%
AGAGAGATTCATAGCACTTT+CGG + chr2_1:77774233-77774252 Msa0227130:CDS 35.0%
! AAAGCGACACTCATTTTGAA+AGG - chr2_1:77774434-77774453 None:intergenic 35.0%
ATTGTGTGAGAGAGAAAAGT+TGG + chr2_1:77774565-77774584 Msa0227130:intron 35.0%
!!! GACAATCATTTTGAAACGGA+TGG + chr2_1:77774682-77774701 Msa0227130:intron 35.0%
TCAGTTCATGGCAAAAATTG+TGG + chr2_1:77774909-77774928 Msa0227130:intron 35.0%
ATCAATTTCGAGATGAAGCA+AGG + chr2_1:77775037-77775056 Msa0227130:intron 35.0%
TTAACACAGGTGATTTCACA+TGG + chr2_1:77775250-77775269 Msa0227130:intron 35.0%
ATAGACAAGGTTTCTGTACT+TGG + chr2_1:77775708-77775727 Msa0227130:CDS 35.0%
TAAAGAACGCATATCAATGC+TGG + chr2_1:77775758-77775777 Msa0227130:CDS 35.0%
GTTCAAACTATTGTCAATGC+TGG + chr2_1:77775974-77775993 Msa0227130:CDS 35.0%
! AGCAATGATGGTAATGTTGA+GGG - chr2_1:77776054-77776073 None:intergenic 35.0%
! TAGCAATGATGGTAATGTTG+AGG - chr2_1:77776055-77776074 None:intergenic 35.0%
CAACATTACCATCATTGCTA+AGG + chr2_1:77776055-77776074 Msa0227130:CDS 35.0%
! ATGGATTTTATGTGGCAGAT+GGG + chr2_1:77776146-77776165 Msa0227130:intron 35.0%
! ACTTGTTAGATACACTAGCA+TGG - chr2_1:77776256-77776275 None:intergenic 35.0%
TTCTTAAGAGTTGGAGTTGT+AGG + chr2_1:77776281-77776300 Msa0227130:intron 35.0%
TCTTAAGAGTTGGAGTTGTA+GGG + chr2_1:77776282-77776301 Msa0227130:intron 35.0%
! ATGATAGTGATAGTGTTGGA+TGG + chr2_1:77776714-77776733 Msa0227130:intron 35.0%
TACAGATTTGAGTAAGCTCA+CGG + chr2_1:77776799-77776818 Msa0227130:intron 35.0%
ATGACAACGCTTCATTAGAT+AGG + chr2_1:77776893-77776912 Msa0227130:intron 35.0%
! TTAACAACGCTTAAAAGCGT+TGG - chr2_1:77777146-77777165 None:intergenic 35.0%
!! GCTTTTAAGCGTTGTTAAGT+AGG + chr2_1:77777148-77777167 Msa0227130:intron 35.0%
!! CATCGACAACTTGTTTTTCA+AGG + chr2_1:77777178-77777197 Msa0227130:intron 35.0%
!!! TCGACAACTTGTTTTTCAAG+GGG + chr2_1:77777180-77777199 Msa0227130:intron 35.0%
TGTAGGTTATTATTGGAGGA+CGG - chr2_1:77777294-77777313 None:intergenic 35.0%
!! CTCACTAATTTTAGAAGCCA+AGG - chr2_1:77777367-77777386 None:intergenic 35.0%
!! CTTGGCTTCTAAAATTAGTG+AGG + chr2_1:77777365-77777384 Msa0227130:intron 35.0%
!! AAGGGTTTTCCTTAGTTTGA+GGG + chr2_1:77777439-77777458 Msa0227130:intron 35.0%
AGACTCTCAGTTATTACAAG+CGG - chr2_1:77777471-77777490 None:intergenic 35.0%
! AGCCAAAAGAATGCTTTTCT+AGG + chr2_1:77777497-77777516 Msa0227130:intron 35.0%
!!! CACCTAGAAAAGCATTCTTT+TGG - chr2_1:77777502-77777521 None:intergenic 35.0%
! CAAAAGAATGCTTTTCTAGG+TGG + chr2_1:77777500-77777519 Msa0227130:intron 35.0%
TATATCGAGCAATCCAAACT+TGG - chr2_1:77777553-77777572 None:intergenic 35.0%
TATATTCCATGCTTACCTTG+TGG + chr2_1:77777569-77777588 Msa0227130:intron 35.0%
ATATTCCATGCTTACCTTGT+GGG + chr2_1:77777570-77777589 Msa0227130:intron 35.0%
TACACACATAGTTGTTGAGT+TGG + chr2_1:77777610-77777629 Msa0227130:intron 35.0%
CAAGTGCAAAACTAGCAATA+AGG - chr2_1:77777693-77777712 None:intergenic 35.0%
! ATTTCTCTCTGGTTTCAAGT+TGG + chr2_1:77777815-77777834 Msa0227130:intron 35.0%
TTTCAGTCTCAAACTTTGTG+AGG + chr2_1:77777878-77777897 Msa0227130:intron 35.0%
TCTGTCTCTGAATACATGTA+GGG - chr2_1:77778260-77778279 None:intergenic 35.0%
GGTCATTGAATCAAAATCAG+AGG + chr2_1:77778376-77778395 Msa0227130:intron 35.0%
GACATGCTTATGTCTCTAAA+TGG + chr2_1:77778735-77778754 Msa0227130:intron 35.0%
TGACCCCATTATGAATACTA+CGG + chr2_1:77778792-77778811 Msa0227130:intron 35.0%
TGTCCGTAGTATTCATAATG+GGG - chr2_1:77778798-77778817 None:intergenic 35.0%
CTGTCCGTAGTATTCATAAT+GGG - chr2_1:77778799-77778818 None:intergenic 35.0%
TCTGTCCGTAGTATTCATAA+TGG - chr2_1:77778800-77778819 None:intergenic 35.0%
GTATTGAGACCATAAACTTG+AGG - chr2_1:77778868-77778887 None:intergenic 35.0%
!! CTATTGACACCTCTACTTTT+GGG - chr2_1:77778947-77778966 None:intergenic 35.0%
! TCTATTGACACCTCTACTTT+TGG - chr2_1:77778948-77778967 None:intergenic 35.0%
!! TTTAATTTAGTGGGCTTGGT+GGG - chr2_1:77779003-77779022 None:intergenic 35.0%
! TTAGGGGGCTTTAATTTAGT+GGG - chr2_1:77779012-77779031 None:intergenic 35.0%
! ATTAGGGGGCTTTAATTTAG+TGG - chr2_1:77779013-77779032 None:intergenic 35.0%
!!! TTCATAGAAATTTTGGGGCT+TGG + chr2_1:77781438-77781457 Msa0227130:intron 35.0%
!!! TCATAGAAATTTTGGGGCTT+GGG + chr2_1:77781439-77781458 Msa0227130:intron 35.0%
! ATGTGGGCCTTTTAATCTTA+TGG + chr2_1:77781488-77781507 Msa0227130:intron 35.0%
TTTGGAAAGGACATTCAACA+TGG - chr2_1:77781682-77781701 None:intergenic 35.0%
! CGAAGCTTTTCAATTTGGAA+AGG - chr2_1:77781695-77781714 None:intergenic 35.0%
! GTGAACGAAGCTTTTCAATT+TGG - chr2_1:77781700-77781719 None:intergenic 35.0%
! ATATGCGTCCTTTTCTGTTT+AGG + chr2_1:77781765-77781784 Msa0227130:intron 35.0%
! TATGCGTCCTTTTCTGTTTA+GGG + chr2_1:77781766-77781785 Msa0227130:intron 35.0%
ATTTGGTCCCTAAACAGAAA+AGG - chr2_1:77781776-77781795 None:intergenic 35.0%
ACTGTACATTCCAATCATAC+TGG + chr2_1:77781915-77781934 Msa0227130:intron 35.0%
TCTCATTCAGATAAACCTCT+AGG + chr2_1:77782098-77782117 Msa0227130:intron 35.0%
! TCTTTAGCTTCACTTAGCTT+AGG + chr2_1:77782227-77782246 Msa0227130:intron 35.0%
AAGTCTCTACATCTACATGA+TGG + chr2_1:77782394-77782413 Msa0227130:intron 35.0%
ATTGAGATGAGACATGGTAT+TGG - chr2_1:77782443-77782462 None:intergenic 35.0%
ATACCATGTCTCATCTCAAT+CGG + chr2_1:77782443-77782462 Msa0227130:intron 35.0%
CGGTATAGCATTATACAATG+TGG - chr2_1:77782486-77782505 None:intergenic 35.0%
! AGTGTTATTACCGAATGAAG+AGG - chr2_1:77782806-77782825 None:intergenic 35.0%
GTTGATGTAGAGAATATGCA+AGG + chr2_1:77782986-77783005 Msa0227130:CDS 35.0%
GTTATCATCTTCTAGTGAGA+TGG + chr2_1:77783099-77783118 Msa0227130:CDS 35.0%
TGTAGTAGTAGCTGGTATTA+TGG - chr2_1:77783212-77783231 None:intergenic 35.0%
TTCTACTCTTCTTTCCACTT+TGG - chr2_1:77783318-77783337 None:intergenic 35.0%
TCAGTGTTTGGATCACATTA+TGG + chr2_1:77783345-77783364 Msa0227130:CDS 35.0%
ATTATTACCTTCTTCAAGCC+AGG - chr2_1:77783430-77783449 None:intergenic 35.0%
TGACACACAAATGTGATATG+TGG - chr2_1:77783803-77783822 None:intergenic 35.0%
CATATCACATTTGTGTGTCA+TGG + chr2_1:77783803-77783822 Msa0227130:intron 35.0%
AGTTAGCATAAACAAACGAG+TGG - chr2_1:77783868-77783887 None:intergenic 35.0%
ATAGTTACGAAGATGAAGCA+CGG + chr2_1:77784114-77784133 Msa0227130:intron 35.0%
ACATAATTTAGTACTCCCTC+CGG + chr2_1:77784207-77784226 Msa0227130:intron 35.0%
ACACATAGTTATACTCCCTT+CGG - chr2_1:77784358-77784377 None:intergenic 35.0%
! AAGGGAGTATAACTATGTGT+TGG + chr2_1:77784358-77784377 Msa0227130:intron 35.0%
AGTTATGCATGTTCTGATGT+TGG - chr2_1:77784414-77784433 None:intergenic 35.0%
TTGTCAGTATCTATGAAGGA+CGG - chr2_1:77784446-77784465 None:intergenic 35.0%
!!! TTTTTTCACTACGTATGGCA+TGG - chr2_1:77784750-77784769 None:intergenic 35.0%
!! AGAATTTGTGTCATTTGAGG+TGG - chr2_1:77785429-77785448 None:intergenic 35.0%
TTAGGAGTTGAACAACTTGA+GGG - chr2_1:77786062-77786081 None:intergenic 35.0%
TTTAGGAGTTGAACAACTTG+AGG - chr2_1:77786063-77786082 None:intergenic 35.0%
AATCAATCGGAAGTTATGAC+CGG - chr2_1:77786129-77786148 None:intergenic 35.0%
GGCTAATAGTATTACAACTG+AGG + chr2_1:77786254-77786273 Msa0227130:intron 35.0%
GCATTTATTAACGGTGTGTT+TGG + chr2_1:77786303-77786322 Msa0227130:intron 35.0%
! AAATAGATGAGAGAGAGTGT+GGG + chr2_1:77786351-77786370 Msa0227130:intron 35.0%
CTAACTCATCATGTTTGGTT+AGG - chr2_1:77786969-77786988 None:intergenic 35.0%
GATTGCTAACTCATCATGTT+TGG - chr2_1:77786974-77786993 None:intergenic 35.0%
CCTTGTTCAAAGCATACTTT+AGG - chr2_1:77787057-77787076 None:intergenic 35.0%
! CCTAAAGTATGCTTTGAACA+AGG + chr2_1:77787054-77787073 Msa0227130:intron 35.0%
CATGACATGACATGATTGTA+AGG + chr2_1:77787109-77787128 Msa0227130:intron 35.0%
CAAAATGAAGGTGAATGATC+TGG + chr2_1:77787196-77787215 Msa0227130:CDS 35.0%
AGCAATTGCTTCTGAATATG+AGG + chr2_1:77787231-77787250 Msa0227130:CDS 35.0%
ACATGTTGCATATTTGAGGA+TGG - chr2_1:77787622-77787641 None:intergenic 35.0%
CAGAACATGTTGCATATTTG+AGG - chr2_1:77787626-77787645 None:intergenic 35.0%
CAAATATGCAACATGTTCTG+AGG + chr2_1:77787626-77787645 Msa0227130:three_prime_UTR 35.0%
!! TTCTGAGGTATTGTTTGCTT+TGG + chr2_1:77787641-77787660 Msa0227130:three_prime_UTR 35.0%
!! GGAGGGTATCTGTATTTATC+GGG - chr2_1:77773859-77773878 None:intergenic 40.0%
TACCTAACATGGAGAATTGG+TGG + chr2_1:77773893-77773912 Msa0227130:exon 40.0%
ACCTAACATGGAGAATTGGT+GGG + chr2_1:77773894-77773913 Msa0227130:exon 40.0%
TGTTGGATGCTTCTGATTGA+AGG - chr2_1:77774085-77774104 None:intergenic 40.0%
CCATGTGTAGCAGCATTATT+AGG - chr2_1:77774135-77774154 None:intergenic 40.0%
CCTAATAATGCTGCTACACA+TGG + chr2_1:77774132-77774151 Msa0227130:CDS 40.0%
!! CGACACTCATTTTGAAAGGA+TGG - chr2_1:77774430-77774449 None:intergenic 40.0%
TTCCTTAATCCGTGTGCAAT+TGG - chr2_1:77774459-77774478 None:intergenic 40.0%
! ATTGCACACGGATTAAGGAA+TGG + chr2_1:77774459-77774478 Msa0227130:intron 40.0%
!! CGGATGGAGTACTATTTTAG+TGG + chr2_1:77774698-77774717 Msa0227130:intron 40.0%
GTTACTCACATTTACAGAGG+AGG - chr2_1:77775210-77775229 None:intergenic 40.0%
TGGAGCAACAATGTTATGAG+AGG + chr2_1:77775778-77775797 Msa0227130:CDS 40.0%
CTTCTCTGATTCTATGCCAA+TGG - chr2_1:77775907-77775926 None:intergenic 40.0%
CATTGGCATAGAATCAGAGA+AGG + chr2_1:77775905-77775924 Msa0227130:CDS 40.0%
ATCAACTGCGAGAAACATGA+AGG + chr2_1:77775945-77775964 Msa0227130:CDS 40.0%
! CATGGATTTTATGTGGCAGA+TGG + chr2_1:77776145-77776164 Msa0227130:intron 40.0%
GGGTATGAATGTGAACAGAA+AGG + chr2_1:77776302-77776321 Msa0227130:intron 40.0%
!!! TTGCTTATATTTTGGGACGG+AGG + chr2_1:77776434-77776453 Msa0227130:intron 40.0%
!!! TGCTTATATTTTGGGACGGA+GGG + chr2_1:77776435-77776454 Msa0227130:intron 40.0%
! TAGTGTTGGATGGAAATCGA+TGG + chr2_1:77776724-77776743 Msa0227130:intron 40.0%
!!! CGACAACTTGTTTTTCAAGG+GGG + chr2_1:77777181-77777200 Msa0227130:intron 40.0%
GTAGGTTATTATTGGAGGAC+GGG - chr2_1:77777293-77777312 None:intergenic 40.0%
!! GAAGGGTTTTCCTTAGTTTG+AGG + chr2_1:77777438-77777457 Msa0227130:intron 40.0%
! ATTTCTTGTGGTGCCAAGTT+TGG + chr2_1:77777537-77777556 Msa0227130:intron 40.0%
TATTCCATGCTTACCTTGTG+GGG + chr2_1:77777571-77777590 Msa0227130:intron 40.0%
TTGAATGTATTACCCCCACA+AGG - chr2_1:77777587-77777606 None:intergenic 40.0%
TTGGCAATATTGGTCCGTAT+AGG + chr2_1:77777773-77777792 Msa0227130:intron 40.0%
TAGTGTTGTCTCACCCTTAA+AGG + chr2_1:77778008-77778027 Msa0227130:intron 40.0%
AAGAAAAACGTGGGAAGGAA+AGG + chr2_1:77778036-77778055 Msa0227130:intron 40.0%
CAGTGAGAGCAACCAATAAT+AGG + chr2_1:77778062-77778081 Msa0227130:intron 40.0%
TCTCTGAATACATGTAGGGT+CGG - chr2_1:77778256-77778275 None:intergenic 40.0%
CTCTGTCTCTGAATACATGT+AGG - chr2_1:77778261-77778280 None:intergenic 40.0%
!!! TTTTGAAGCACTCGTGCATT+TGG + chr2_1:77778345-77778364 Msa0227130:intron 40.0%
ATAGACATCTCTCTCTCGAT+TGG + chr2_1:77778693-77778712 Msa0227130:intron 40.0%
TAGACATCTCTCTCTCGATT+GGG + chr2_1:77778694-77778713 Msa0227130:intron 40.0%
!! TTAATTTAGTGGGCTTGGTG+GGG - chr2_1:77779002-77779021 None:intergenic 40.0%
!! CTTTAATTTAGTGGGCTTGG+TGG - chr2_1:77779004-77779023 None:intergenic 40.0%
!!! CATAGAAATTTTGGGGCTTG+GGG + chr2_1:77781440-77781459 Msa0227130:intron 40.0%
!!! ATAGAAATTTTGGGGCTTGG+GGG + chr2_1:77781441-77781460 Msa0227130:intron 40.0%
! TTTTAAGCCCCGTTACTATG+TGG + chr2_1:77781513-77781532 Msa0227130:intron 40.0%
TTTAAGCCCCGTTACTATGT+GGG + chr2_1:77781514-77781533 Msa0227130:intron 40.0%
! ATCATGGAGCCTTGAAGTTT+TGG - chr2_1:77781545-77781564 None:intergenic 40.0%
!! TCTATACGTCTTTTGGGTAG+AGG - chr2_1:77781575-77781594 None:intergenic 40.0%
TTTCACTCTATTGCCAGTTC+TGG + chr2_1:77781632-77781651 Msa0227130:intron 40.0%
CAATGCTTCATTTCCAGAAC+TGG - chr2_1:77781648-77781667 None:intergenic 40.0%
! TTCGTTCACATGTTTTGCTC+AGG + chr2_1:77781711-77781730 Msa0227130:CDS 40.0%
! GCTTTCACACTTTCCCTTTT+TGG + chr2_1:77781816-77781835 Msa0227130:intron 40.0%
TGCATTCCATTGGATACTTG+TGG + chr2_1:77781959-77781978 Msa0227130:intron 40.0%
GCATTCCATTGGATACTTGT+GGG + chr2_1:77781960-77781979 Msa0227130:intron 40.0%
! TCCAACGTTCAAGTTAGTGA+GGG - chr2_1:77782126-77782145 None:intergenic 40.0%
! ATGTATGTCATCCCCTTTTG+TGG + chr2_1:77782154-77782173 Msa0227130:intron 40.0%
GAGTTACTCGAATGTAGTGT+AGG - chr2_1:77782198-77782217 None:intergenic 40.0%
GTGAAGCTAAAGACAACAGT+TGG - chr2_1:77782220-77782239 None:intergenic 40.0%
!! AGATGAGACATGGTATTGGT+AGG - chr2_1:77782439-77782458 None:intergenic 40.0%
AGCATTATACAATGTGGGTC+AGG - chr2_1:77782480-77782499 None:intergenic 40.0%
AATGAAGCTAAGGGGGATAA+GGG - chr2_1:77782712-77782731 None:intergenic 40.0%
ACTGGATGAATGAAGCTAAG+GGG - chr2_1:77782720-77782739 None:intergenic 40.0%
CACTGGATGAATGAAGCTAA+GGG - chr2_1:77782721-77782740 None:intergenic 40.0%
TCACTGGATGAATGAAGCTA+AGG - chr2_1:77782722-77782741 None:intergenic 40.0%
TTCTTCTCATGGAGCAATCA+TGG + chr2_1:77782771-77782790 Msa0227130:CDS 40.0%
TCTTCTCATGGAGCAATCAT+GGG + chr2_1:77782772-77782791 Msa0227130:CDS 40.0%
TGGAGCAATCATGGGAAAAT+TGG + chr2_1:77782780-77782799 Msa0227130:CDS 40.0%
! GGAAAATTGGCCTCTTCATT+CGG + chr2_1:77782793-77782812 Msa0227130:CDS 40.0%
CAGCAACCTGTTACATATTC+TGG + chr2_1:77783070-77783089 Msa0227130:CDS 40.0%
CTGCTTCCAGAATATGTAAC+AGG - chr2_1:77783079-77783098 None:intergenic 40.0%
! CTGTTACATATTCTGGAAGC+AGG + chr2_1:77783077-77783096 Msa0227130:CDS 40.0%
TCATCTTCTAGTGAGATGGA+CGG + chr2_1:77783103-77783122 Msa0227130:CDS 40.0%
AAGGAGAGAATGAATGTCCT+TGG - chr2_1:77783178-77783197 None:intergenic 40.0%
GGTACTTCTTGTTCTGATTC+TGG - chr2_1:77783235-77783254 None:intergenic 40.0%
GCAAAAGCTAGTAACCAAAG+TGG + chr2_1:77783301-77783320 Msa0227130:CDS 40.0%
AGTGGAAAGAAGAGTAGAAG+TGG + chr2_1:77783319-77783338 Msa0227130:CDS 40.0%
TAGAAGTGGTTCTCAGTGTT+TGG + chr2_1:77783333-77783352 Msa0227130:CDS 40.0%
! TACTATTCCTGGCTTGAAGA+AGG + chr2_1:77783420-77783439 Msa0227130:CDS 40.0%
! GTGTGTATAATGGAAGCATG+AGG - chr2_1:77783714-77783733 None:intergenic 40.0%
! TGCTTATATTTAGGACCGGA+GGG - chr2_1:77784225-77784244 None:intergenic 40.0%
! TTGCTTATATTTAGGACCGG+AGG - chr2_1:77784226-77784245 None:intergenic 40.0%
ATGGACAAGACCTCTATACT+TGG + chr2_1:77785284-77785303 Msa0227130:CDS 40.0%
GATTGCTTCACCAAGTATAG+AGG - chr2_1:77785297-77785316 None:intergenic 40.0%
ACTACTTCAAGAACGTGTGA+AGG + chr2_1:77785328-77785347 Msa0227130:CDS 40.0%
TTAACATCAGGGAGTGATGA+TGG - chr2_1:77785470-77785489 None:intergenic 40.0%
ATCCACTGTGAGAAGGAAAA+TGG + chr2_1:77785524-77785543 Msa0227130:CDS 40.0%
! CCAGCAGTGTATTTCCTTTT+GGG + chr2_1:77785600-77785619 Msa0227130:CDS 40.0%
CCAAGAGTTGAATTCCCAAA+AGG - chr2_1:77785617-77785636 None:intergenic 40.0%
!! CCTTTTGGGAATTCAACTCT+TGG + chr2_1:77785614-77785633 Msa0227130:CDS 40.0%
! TTCCGATTGATTTATGCGAC+CGG + chr2_1:77786137-77786156 Msa0227130:intron 40.0%
GATCTATCAGACCATAACTC+CGG - chr2_1:77786159-77786178 None:intergenic 40.0%
TTTATCATCGTACGCTCCAA+GGG - chr2_1:77786281-77786300 None:intergenic 40.0%
ATTTATCATCGTACGCTCCA+AGG - chr2_1:77786282-77786301 None:intergenic 40.0%
GAAATAGATGAGAGAGAGTG+TGG + chr2_1:77786350-77786369 Msa0227130:intron 40.0%
GGAAGAAACAAAAAGTGGGT+GGG + chr2_1:77786907-77786926 Msa0227130:intron 40.0%
GAAGAAACAAAAAGTGGGTG+GGG + chr2_1:77786908-77786927 Msa0227130:intron 40.0%
GAAGAGAGACCCAAAATGTA+TGG - chr2_1:77786935-77786954 None:intergenic 40.0%
GTTTGGTTAGGAGAGAAAGA+GGG - chr2_1:77786957-77786976 None:intergenic 40.0%
TGTTTGGTTAGGAGAGAAAG+AGG - chr2_1:77786958-77786977 None:intergenic 40.0%
AGTTAGAGACGAGAGAGTTA+GGG - chr2_1:77787016-77787035 None:intergenic 40.0%
!! TACTTTAGGGTGTGTTTGGT+AGG - chr2_1:77787043-77787062 None:intergenic 40.0%
!! AGCATACTTTAGGGTGTGTT+TGG - chr2_1:77787047-77787066 None:intergenic 40.0%
! AAGTATGCTTTGAACAAGGC+TGG + chr2_1:77787058-77787077 Msa0227130:intron 40.0%
ATTCAGAAGCAATTGCTGCA+TGG - chr2_1:77787228-77787247 None:intergenic 40.0%
CTTCTGAATATGAGGAGTTG+AGG + chr2_1:77787239-77787258 Msa0227130:CDS 40.0%
CTTGATACACTAGTACGGAT+CGG - chr2_1:77787275-77787294 None:intergenic 40.0%
AAATGTGGGCTTCGGTTTAA+AGG + chr2_1:77787501-77787520 Msa0227130:three_prime_UTR 40.0%
TCCCACCAATTCTCCATGTT+AGG - chr2_1:77773898-77773917 None:intergenic 45.0%
TGGAGAATTGGTGGGAGAAT+TGG + chr2_1:77773902-77773921 Msa0227130:CDS 45.0%
ATAAGAGGGTGAGAAGCTCA+TGG + chr2_1:77774160-77774179 Msa0227130:CDS 45.0%
TAAGAGGGTGAGAAGCTCAT+GGG + chr2_1:77774161-77774180 Msa0227130:CDS 45.0%
AGAAGCTCATGGGAGATACA+AGG + chr2_1:77774171-77774190 Msa0227130:CDS 45.0%
! TATGATACCCGGCTTGAAGA+AGG + chr2_1:77774257-77774276 Msa0227130:CDS 45.0%
TCGCTTTAGCCAATTGCACA+CGG + chr2_1:77774447-77774466 Msa0227130:intron 45.0%
! AGCCAATTGCACACGGATTA+AGG + chr2_1:77774454-77774473 Msa0227130:intron 45.0%
TTCTTATGCTTGGAGCTTGG+TGG - chr2_1:77775137-77775156 None:intergenic 45.0%
GAGTTCTTATGCTTGGAGCT+TGG - chr2_1:77775140-77775159 None:intergenic 45.0%
! TTTTATGTGGCAGATGGGTG+AGG + chr2_1:77776151-77776170 Msa0227130:intron 45.0%
CGGTCTAAACCCTCAAACTA+AGG - chr2_1:77777451-77777470 None:intergenic 45.0%
ATTCCATGCTTACCTTGTGG+GGG + chr2_1:77777572-77777591 Msa0227130:intron 45.0%
GCATAAATGGATGCATGTGC+CGG + chr2_1:77777852-77777871 Msa0227130:intron 45.0%
ATGTATTCAGAGACAGAGCC+AGG + chr2_1:77778263-77778282 Msa0227130:intron 45.0%
CTCGTGCATTTGGTACATTC+AGG + chr2_1:77778355-77778374 Msa0227130:intron 45.0%
!!! TGGTGGGGGCTTTTTTAAGT+GGG - chr2_1:77778987-77779006 None:intergenic 45.0%
!!! TTGGTGGGGGCTTTTTTAAG+TGG - chr2_1:77778988-77779007 None:intergenic 45.0%
!! TAATTTAGTGGGCTTGGTGG+GGG - chr2_1:77779001-77779020 None:intergenic 45.0%
!! GGGCTTTAATTTAGTGGGCT+TGG - chr2_1:77779007-77779026 None:intergenic 45.0%
!!! CTTGGGGGCTTTTGATTTGT+GGG + chr2_1:77781456-77781475 Msa0227130:intron 45.0%
TTTGTGGGCTTGCATGAATG+TGG + chr2_1:77781471-77781490 Msa0227130:intron 45.0%
TTGTGGGCTTGCATGAATGT+GGG + chr2_1:77781472-77781491 Msa0227130:intron 45.0%
!! GGGTAGAGGTGTCAATATCA+TGG - chr2_1:77781561-77781580 None:intergenic 45.0%
GTACACCCACAAGTATCCAA+TGG - chr2_1:77781968-77781987 None:intergenic 45.0%
AAGTTAGTGAGGGTTCCTAG+AGG - chr2_1:77782116-77782135 None:intergenic 45.0%
ACCCTCACTAACTTGAACGT+TGG + chr2_1:77782122-77782141 Msa0227130:intron 45.0%
! CTCCAACGTTCAAGTTAGTG+AGG - chr2_1:77782127-77782146 None:intergenic 45.0%
! ATGTCATCCCCTTTTGTGGA+TGG + chr2_1:77782158-77782177 Msa0227130:intron 45.0%
TACTCGAATGTAGTGTAGGC+TGG - chr2_1:77782194-77782213 None:intergenic 45.0%
ATGCTATACCGGCCACATAT+TGG + chr2_1:77782495-77782514 Msa0227130:intron 45.0%
TGCTATACCGGCCACATATT+GGG + chr2_1:77782496-77782515 Msa0227130:intron 45.0%
TATTGGGCCGACCAATTGTT+TGG + chr2_1:77782512-77782531 Msa0227130:intron 45.0%
CGCATTGCCAAACAATTGGT+CGG - chr2_1:77782522-77782541 None:intergenic 45.0%
CGACCAATTGTTTGGCAATG+CGG + chr2_1:77782520-77782539 Msa0227130:intron 45.0%
GAATGAAGCTAAGGGGGATA+AGG - chr2_1:77782713-77782732 None:intergenic 45.0%
CTGGATGAATGAAGCTAAGG+GGG - chr2_1:77782719-77782738 None:intergenic 45.0%
ATGAATGTCCTTGGAGTGGA+CGG - chr2_1:77783169-77783188 None:intergenic 45.0%
GAGAATGAATGTCCTTGGAG+TGG - chr2_1:77783173-77783192 None:intergenic 45.0%
GATTCTGGTGTAGTAGTAGC+TGG - chr2_1:77783220-77783239 None:intergenic 45.0%
GCACTTTCAGCTACTATTCC+TGG + chr2_1:77783409-77783428 Msa0227130:CDS 45.0%
GATGTGTGTGCCATCTATGA+TGG + chr2_1:77783831-77783850 Msa0227130:intron 45.0%
! ACTATGTGTTGGTCTCGTGT+CGG + chr2_1:77784369-77784388 Msa0227130:intron 45.0%
ATGTCAAGATCCCGTGTCAT+TGG - chr2_1:77784522-77784541 None:intergenic 45.0%
TTCACTACGTATGGCATGGA+TGG - chr2_1:77784746-77784765 None:intergenic 45.0%
AGAACGTGTGAAGGAGTTAG+AGG + chr2_1:77785337-77785356 Msa0227130:CDS 45.0%
GTGTGAAGGAGTTAGAGGAA+CGG + chr2_1:77785342-77785361 Msa0227130:CDS 45.0%
AGTTAGAGGAACGGAACAAG+AGG + chr2_1:77785351-77785370 Msa0227130:CDS 45.0%
CATTGAGATCCACTGTGAGA+AGG + chr2_1:77785517-77785536 Msa0227130:CDS 45.0%
!!! TGCCATTTTCCTTCTCACAG+TGG - chr2_1:77785529-77785548 None:intergenic 45.0%
! GCCAGCAGTGTATTTCCTTT+TGG + chr2_1:77785599-77785618 Msa0227130:CDS 45.0%
CCCAAAAGGAAATACACTGC+TGG - chr2_1:77785603-77785622 None:intergenic 45.0%
TGGCTTCACTATTGTTGCTC+AGG + chr2_1:77785634-77785653 Msa0227130:CDS 45.0%
CTATTGTTGCTCAGGTACGT+AGG + chr2_1:77785642-77785661 Msa0227130:intron 45.0%
CTCCGGTCGCATAAATCAAT+CGG - chr2_1:77786142-77786161 None:intergenic 45.0%
GATTTATGCGACCGGAGTTA+TGG + chr2_1:77786145-77786164 Msa0227130:intron 45.0%
AGAAGTTCACAAGGCACACA+AGG + chr2_1:77786827-77786846 Msa0227130:intron 45.0%
GAAGTTCACAAGGCACACAA+GGG + chr2_1:77786828-77786847 Msa0227130:intron 45.0%
GCCATTTCTCTCCTCTTTCT+CGG + chr2_1:77786876-77786895 Msa0227130:intron 45.0%
TCCTCTTTCTCGGCAGTTTA+GGG + chr2_1:77786886-77786905 Msa0227130:intron 45.0%
GGGAAGAAACAAAAAGTGGG+TGG + chr2_1:77786906-77786925 Msa0227130:intron 45.0%
GAGTTAGAGACGAGAGAGTT+AGG - chr2_1:77787017-77787036 None:intergenic 45.0%
GGGTGACGAGTACAAAATGA+AGG + chr2_1:77787184-77787203 Msa0227130:CDS 45.0%
TCCGTACTAGTGTATCAAGC+AGG + chr2_1:77787276-77787295 Msa0227130:three_prime_UTR 45.0%
GCCTGCTTGATACACTAGTA+CGG - chr2_1:77787280-77787299 None:intergenic 45.0%
!!! ATGAAATTATTTTTATAAAA+TGG - chr2_1:77773956-77773975 None:intergenic 5.0%
!!! ATTATATTAACTTTTTATAA+TGG + chr2_1:77774382-77774401 Msa0227130:intron 5.0%
!!! TATATTAGTATTTTTTTTTT+GGG - chr2_1:77778631-77778650 None:intergenic 5.0%
!!! ATATATTAGTATTTTTTTTT+TGG - chr2_1:77778632-77778651 None:intergenic 5.0%
!! TAAGAAAAAAATTATAATAT+GGG - chr2_1:77779099-77779118 None:intergenic 5.0%
!! TTAAGAAAAAAATTATAATA+TGG - chr2_1:77779100-77779119 None:intergenic 5.0%
!!! AATAATTGTTTTTTTTTTTT+TGG + chr2_1:77782554-77782573 Msa0227130:intron 5.0%
!! TTATTTATTATACATTAAAA+GGG - chr2_1:77784813-77784832 None:intergenic 5.0%
!! TTTATTTATTATACATTAAA+AGG - chr2_1:77784814-77784833 None:intergenic 5.0%
!! ATGATATTTAATAATTAAAT+GGG - chr2_1:77785732-77785751 None:intergenic 5.0%
!! AATGATATTTAATAATTAAA+TGG - chr2_1:77785733-77785752 None:intergenic 5.0%
!! ACAATAAATAAATATATTTA+GGG - chr2_1:77785840-77785859 None:intergenic 5.0%
!! AACAATAAATAAATATATTT+AGG - chr2_1:77785841-77785860 None:intergenic 5.0%
GCACTTTCGGCTATGATACC+CGG + chr2_1:77774246-77774265 Msa0227130:CDS 50.0%
GAACTGACCTTCTTCAAGCC+GGG - chr2_1:77774267-77774286 None:intergenic 50.0%
GGAACTGACCTTCTTCAAGC+CGG - chr2_1:77774268-77774287 None:intergenic 50.0%
! TTCAGGGAGGAGCACATGAT+TGG - chr2_1:77775877-77775896 None:intergenic 50.0%
CACTGCTGGTGGAAACATAG+AGG - chr2_1:77776010-77776029 None:intergenic 50.0%
! AAATGGAAGCACACTGCTGG+TGG - chr2_1:77776021-77776040 None:intergenic 50.0%
ACCAGCAGTGTGCTTCCATT+TGG + chr2_1:77776020-77776039 Msa0227130:CDS 50.0%
! TCCAAATGGAAGCACACTGC+TGG - chr2_1:77776024-77776043 None:intergenic 50.0%
TTCAAGGGGGCAGTCATTAC+TGG + chr2_1:77777194-77777213 Msa0227130:intron 50.0%
TTACCCCCACAAGGTAAGCA+TGG - chr2_1:77777578-77777597 None:intergenic 50.0%
AGTCACGCATAACTGCTGAG+TGG + chr2_1:77777639-77777658 Msa0227130:intron 50.0%
!!! GCTTGGGGGCTTTTGATTTG+TGG + chr2_1:77781455-77781474 Msa0227130:intron 50.0%
TGCTCAGGAGACTTTACTCG+TGG + chr2_1:77781726-77781745 Msa0227130:CDS 50.0%
CGCATATCTTACCAGCTCAG+AGG - chr2_1:77781752-77781771 None:intergenic 50.0%
AGTGGCGACCATCCACAAAA+GGG - chr2_1:77782169-77782188 None:intergenic 50.0%
GGTCCGATTGAGATGAGACA+TGG - chr2_1:77782449-77782468 None:intergenic 50.0%
AATGTGGGTCAGGTGACTTG+AGG - chr2_1:77782470-77782489 None:intergenic 50.0%
CAATTGGTCGGCCCAATATG+TGG - chr2_1:77782510-77782529 None:intergenic 50.0%
GGACCGCATTGCCAAACAAT+TGG - chr2_1:77782526-77782545 None:intergenic 50.0%
!! CTGTGATGTGTCGACTTCAC+TGG - chr2_1:77782738-77782757 None:intergenic 50.0%
CGAAGATGAAGCACGGATAC+AGG + chr2_1:77784121-77784140 Msa0227130:intron 50.0%
ATGAAGCACGGATACAGGCA+CGG + chr2_1:77784126-77784145 Msa0227130:intron 50.0%
GTATTACAACTGAGGGCCCT+TGG + chr2_1:77786262-77786281 Msa0227130:intron 50.0%
GACAGGTTCATTCGCAATGC+TGG + chr2_1:77786739-77786758 Msa0227130:intron 50.0%
!! AAGGCACACAAGGGTATTGC+TGG + chr2_1:77786837-77786856 Msa0227130:intron 50.0%
GCCGAGAAAGAGGAGAGAAA+TGG - chr2_1:77786880-77786899 None:intergenic 50.0%
CTCCTCTTTCTCGGCAGTTT+AGG + chr2_1:77786885-77786904 Msa0227130:intron 50.0%
TCCCTAAACTGCCGAGAAAG+AGG - chr2_1:77786890-77786909 None:intergenic 50.0%
! TGGGTGGGGTCCATACATTT+TGG + chr2_1:77786922-77786941 Msa0227130:intron 50.0%
! GGGTGGGGTCCATACATTTT+GGG + chr2_1:77786923-77786942 Msa0227130:intron 50.0%
TAGAGACGAGAGAGTTAGGG+AGG - chr2_1:77787013-77787032 None:intergenic 50.0%
!! CTAGTACGGATCGGTTTTGC+TGG - chr2_1:77787266-77787285 None:intergenic 50.0%
AAGGAGAGGGATCGTGAAGC+TGG - chr2_1:77773786-77773805 None:intergenic 55.0%
TCATGTGCTCCTCCCTGAAG+TGG + chr2_1:77775878-77775897 Msa0227130:CDS 55.0%
TGCCAATGGCCTCCACTTCA+GGG - chr2_1:77775893-77775912 None:intergenic 55.0%
ATGCCAATGGCCTCCACTTC+AGG - chr2_1:77775894-77775913 None:intergenic 55.0%
GGCAGATGGGTGAGGAATAC+AGG + chr2_1:77776159-77776178 Msa0227130:intron 55.0%
AAGGGGGCAGTCATTACTGG+TGG + chr2_1:77777197-77777216 Msa0227130:intron 55.0%
! GGCAGTCATTACTGGTGGAC+TGG + chr2_1:77777202-77777221 Msa0227130:intron 55.0%
TGGCCCAGCCCACATAGTAA+CGG - chr2_1:77781525-77781544 None:intergenic 55.0%
! TGGGCTGGGCCAAAACTTCA+AGG + chr2_1:77781533-77781552 Msa0227130:intron 55.0%
TTTACTCGTGGCCTCTGAGC+TGG + chr2_1:77781738-77781757 Msa0227130:CDS 55.0%
GTGGCGACCATCCACAAAAG+GGG - chr2_1:77782168-77782187 None:intergenic 55.0%
GAGTGGCGACCATCCACAAA+AGG - chr2_1:77782170-77782189 None:intergenic 55.0%
ATGTAGTGTAGGCTGGCGAG+TGG - chr2_1:77782187-77782206 None:intergenic 55.0%
ATGGACGGCTCAGATAGCTC+AGG + chr2_1:77783118-77783137 Msa0227130:CDS 55.0%
TGGACGGCTCAGATAGCTCA+GGG + chr2_1:77783119-77783138 Msa0227130:CDS 55.0%
!! GGAGTGGACGGTGTTGATGA+AGG - chr2_1:77783157-77783176 None:intergenic 55.0%
CATCAACACCGTCCACTCCA+AGG + chr2_1:77783158-77783177 Msa0227130:CDS 55.0%
! TGTTGGTCTCGTGTCGGTGT+CGG + chr2_1:77784375-77784394 Msa0227130:intron 55.0%
CACTTGTGATGAGCAGCGAG+CGG + chr2_1:77784491-77784510 Msa0227130:intron 55.0%
TGTGCTCCTCCCTGAAGTGG+AGG + chr2_1:77775881-77775900 Msa0227130:CDS 60.0%
CAATGGCCTCCACTTCAGGG+AGG - chr2_1:77775890-77775909 None:intergenic 60.0%
CTCCCTGAAGTGGAGGCCAT+TGG + chr2_1:77775888-77775907 Msa0227130:CDS 60.0%
GGTCTCGGGCGTGTAATTCC+TGG - chr2_1:77778284-77778303 None:intergenic 60.0%
AGCCCCGTTACTATGTGGGC+TGG + chr2_1:77781518-77781537 Msa0227130:intron 60.0%
GCCCCGTTACTATGTGGGCT+GGG + chr2_1:77781519-77781538 Msa0227130:intron 60.0%
GCCCAGCCCACATAGTAACG+GGG - chr2_1:77781523-77781542 None:intergenic 60.0%
GGCCCAGCCCACATAGTAAC+GGG - chr2_1:77781524-77781543 None:intergenic 60.0%
TGGTCGGCCCAATATGTGGC+CGG - chr2_1:77782506-77782525 None:intergenic 60.0%
!! GAGCGGTGCTGCCAATGACA+CGG + chr2_1:77784508-77784527 Msa0227130:intron 60.0%
!! AGCGGTGCTGCCAATGACAC+GGG + chr2_1:77784509-77784528 Msa0227130:intron 60.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 77773783 77787701 77773783 ID=Msa0227130;Name=Msa0227130
chr2_1 mRNA 77773783 77787701 77773783 ID=Msa0227130-mRNA-1;Parent=Msa0227130;Name=Msa0227130-mRNA-1;_AED=0.35;_eAED=0.35;_QI=118|0.75|0.66|0.88|1|1|9|442|599
chr2_1 exon 77773783 77773936 77773783 ID=Msa0227130-mRNA-1:exon:23677;Parent=Msa0227130-mRNA-1
chr2_1 exon 77774060 77774278 77774060 ID=Msa0227130-mRNA-1:exon:23678;Parent=Msa0227130-mRNA-1
chr2_1 exon 77775708 77776076 77775708 ID=Msa0227130-mRNA-1:exon:23679;Parent=Msa0227130-mRNA-1
chr2_1 exon 77776164 77776240 77776164 ID=Msa0227130-mRNA-1:exon:23680;Parent=Msa0227130-mRNA-1
chr2_1 exon 77781649 77781759 77781649 ID=Msa0227130-mRNA-1:exon:23681;Parent=Msa0227130-mRNA-1
chr2_1 exon 77782739 77782814 77782739 ID=Msa0227130-mRNA-1:exon:23682;Parent=Msa0227130-mRNA-1
chr2_1 exon 77782980 77783441 77782980 ID=Msa0227130-mRNA-1:exon:23683;Parent=Msa0227130-mRNA-1
chr2_1 exon 77785284 77785655 77785284 ID=Msa0227130-mRNA-1:exon:23684;Parent=Msa0227130-mRNA-1
chr2_1 exon 77787182 77787701 77787182 ID=Msa0227130-mRNA-1:exon:23685;Parent=Msa0227130-mRNA-1
chr2_1 five_prime_UTR 77773783 77773900 77773783 ID=Msa0227130-mRNA-1:five_prime_utr;Parent=Msa0227130-mRNA-1
chr2_1 CDS 77773901 77773936 77773901 ID=Msa0227130-mRNA-1:cds;Parent=Msa0227130-mRNA-1
chr2_1 CDS 77774060 77774278 77774060 ID=Msa0227130-mRNA-1:cds;Parent=Msa0227130-mRNA-1
chr2_1 CDS 77775708 77776076 77775708 ID=Msa0227130-mRNA-1:cds;Parent=Msa0227130-mRNA-1
chr2_1 CDS 77776164 77776240 77776164 ID=Msa0227130-mRNA-1:cds;Parent=Msa0227130-mRNA-1
chr2_1 CDS 77781649 77781759 77781649 ID=Msa0227130-mRNA-1:cds;Parent=Msa0227130-mRNA-1
chr2_1 CDS 77782739 77782814 77782739 ID=Msa0227130-mRNA-1:cds;Parent=Msa0227130-mRNA-1
chr2_1 CDS 77782980 77783441 77782980 ID=Msa0227130-mRNA-1:cds;Parent=Msa0227130-mRNA-1
chr2_1 CDS 77785284 77785655 77785284 ID=Msa0227130-mRNA-1:cds;Parent=Msa0227130-mRNA-1
chr2_1 CDS 77787182 77787259 77787182 ID=Msa0227130-mRNA-1:cds;Parent=Msa0227130-mRNA-1
chr2_1 three_prime_UTR 77787260 77787701 77787260 ID=Msa0227130-mRNA-1:three_prime_utr;Parent=Msa0227130-mRNA-1
Gene Sequence

>Msa0227130

ATGGAGAATTGGTGGGAGAATTGGTTCTCTAATATGGATATGAAGGGTAGTGATAACTCCTTCAATCAGAAGCATCCAACAATAATAGGACATTGTTCTAATTCAGTGCCTAATAATGCTGCTACACATGGAAAGAATAAGAGGGTGAGAAGCTCATGGGAGATACAAGGTCACATAATGTCAGAGAGAAAAAGGAGACAAGAAATGGCAGAGAGATTCATAGCACTTTCGGCTATGATACCCGGCTTGAAGAAGATAGACAAGGTTTCTGTACTTGGTGAAGCTATTAATTACGTGAAACAACTTAAAGAACGCATATCAATGCTGGAGCAACAATGTTATGAGAGGAATAAAAAAAGTAGCAAGTCCATAATCTCTATTAAAAAATTTCAATCTCATCCACGTAATGATAATTTGGATTCCAATCATGTGCTCCTCCCTGAAGTGGAGGCCATTGGCATAGAATCAGAGAAGGAACTAGTACTTATTAAAATCAACTGCGAGAAACATGAAGGCATTTTGTTCAAACTATTGTCAATGCTGGAAAATATGCACCTCTATGTTTCCACCAGCAGTGTGCTTCCATTTGGAAAAAATACCCTCAACATTACCATCATTGCTAAGATGGGTGAGGAATACAGGATAACAATAGAAGAATTGATGACAAAGTTGAAACAGGATGTTTTGAAGTTATATGACATTTCTGGAAATGAAGCATTGTTTAAACGTGACCATGTTGAATGTCCTTTCCAAATTGAAAAGCTTCGTTCACATGTTTTGCTCAGGAGACTTTACTCGTGGCCTCTGAGCTGTGAAGTCGACACATCACAGAACAAAACACATTTTCTTCTCATGGAGCAATCATGGGAAAATTGGCCTCTTCATTCGGAAGTGGTTGATGTAGAGAATATGCAAGGGCAATATTGTCATCAAACAAGTATTGATGATGAAGAAGAGTTCTTGAGAGACATAATTCTTCAGCAACCTGTTACATATTCTGGAAGCAGGTTATCATCTTCTAGTGAGATGGACGGCTCAGATAGCTCAGGGAAAAAGCTTCATCCTTCATCAACACCGTCCACTCCAAGGACATTCATTCTCTCCTTTGATAAATCAACCATAATACCAGCTACTACTACACCAGAATCAGAACAAGAAGTACCAAGAACAAAGAGTAGAAGTAATAATAAGAGGAGTTTGGAAACAAAAGCAAAAGCTAGTAACCAAAGTGGAAAGAAGAGTAGAAGTGGTTCTCAGTGTTTGGATCACATTATGGCTGAGAGAAAAAGAAGACTAGAACTATCACAGAAGTTCATTGCACTTTCAGCTACTATTCCTGGCTTGAAGAAGATGGACAAGACCTCTATACTTGGTGAAGCAATCAATTATGTGAAACTACTTCAAGAACGTGTGAAGGAGTTAGAGGAACGGAACAAGAGGAACATCGAATCAACAATAATCCACAAAAGTGATTTGTGTACAAATGAACATACCACCTCAAATGACACAAATTCTGATCAGGATTGTTGTAAACCATCATCACTCCCTGATGTTAAAGCAAGAGTATTGGAAAATGAAGTGCTCATTGAGATCCACTGTGAGAAGGAAAATGGCATTGAGATCAAAATATTGAACTTGCTTGAAAATCTTCATCTTATTGTCACTGCCAGCAGTGTATTTCCTTTTGGGAATTCAACTCTTGGCTTCACTATTGTTGCTCAGATGGGTGACGAGTACAAAATGAAGGTGAATGATCTGGTGAAAACCATGCAGCAATTGCTTCTGAATATGAGGAGTTGA
Protein sequence

>Msa0227130

MENWWENWFSNMDMKGSDNSFNQKHPTIIGHCSNSVPNNAATHGKNKRVRSSWEIQGHIMSERKRRQEMAERFIALSAMIPGLKKIDKVSVLGEAINYVKQLKERISMLEQQCYERNKKSSKSIISIKKFQSHPRNDNLDSNHVLLPEVEAIGIESEKELVLIKINCEKHEGILFKLLSMLENMHLYVSTSSVLPFGKNTLNITIIAKMGEEYRITIEELMTKLKQDVLKLYDISGNEALFKRDHVECPFQIEKLRSHVLLRRLYSWPLSCEVDTSQNKTHFLLMEQSWENWPLHSEVVDVENMQGQYCHQTSIDDEEEFLRDIILQQPVTYSGSRLSSSSEMDGSDSSGKKLHPSSTPSTPRTFILSFDKSTIIPATTTPESEQEVPRTKSRSNNKRSLETKAKASNQSGKKSRSGSQCLDHIMAERKRRLELSQKFIALSATIPGLKKMDKTSILGEAINYVKLLQERVKELEERNKRNIESTIIHKSDLCTNEHTTSNDTNSDQDCCKPSSLPDVKARVLENEVLIEIHCEKENGIEIKILNLLENLHLIVTASSVFPFGNSTLGFTIVAQMGDEYKMKVNDLVKTMQQLLLNMRS*