AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1219530


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1219530 MtrunA17_Chr4g0069291 96.207 580 18 2 1 576 1 580 0.0 1135
Msa1219530 MtrunA17_Chr7g0269591 29.752 363 218 8 116 452 175 526 5.19e-40 156
Msa1219530 MtrunA17_Chr8g0344131 29.261 352 212 7 108 452 242 563 1.03e-33 136
Msa1219530 MtrunA17_Chr5g0395711 36.719 128 74 3 303 429 443 564 1.73e-14 77.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1219530 AT3G17470.2 69.275 524 154 3 58 574 72 595 0.0 714
Msa1219530 AT3G17470.1 69.275 524 154 3 58 574 57 580 0.0 713
Msa1219530 AT3G17470.3 68.668 383 118 1 58 438 57 439 0.0 545
Msa1219530 AT1G54130.1 32.530 332 191 7 108 431 234 540 4.33e-38 150
Msa1219530 AT3G14050.1 32.530 332 190 9 109 431 230 536 6.48e-37 146
Msa1219530 AT4G02260.3 29.969 327 199 7 116 423 177 492 8.91e-37 146
Msa1219530 AT4G02260.4 29.787 329 201 7 116 425 177 494 1.09e-36 146
Msa1219530 AT4G02260.2 29.787 329 201 7 116 425 177 494 1.27e-36 146
Msa1219530 AT4G02260.1 29.697 330 201 8 116 425 177 495 4.16e-35 141

Find 165 sgRNAs with CRISPR-Local

Find 230 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCACTTGGAAAATCTTTA+AGG 0.162251 8_1:+82440206 None:intergenic
TGACATTAGAGCTTTGATTT+TGG 0.217842 8_1:-82441155 Msa1219530:CDS
GACCCTCAACCTATCCTTAA+AGG 0.231562 8_1:-82439497 Msa1219530:three_prime_UTR
GCCTTCCACGAATATCTTAT+AGG 0.237824 8_1:-82439545 Msa1219530:three_prime_UTR
ATCCACTAATTCCGCAAGTA+TGG 0.254255 8_1:+82440856 None:intergenic
AGCACATCATTTACATCTTC+TGG 0.271709 8_1:+82440761 None:intergenic
CATGCTGGCTGCAGCTGAAC+TGG 0.295606 8_1:-82440239 Msa1219530:CDS
CATGCTTCTCGCTGATCTTC+AGG 0.298040 8_1:-82442348 Msa1219530:intron
GCAGTGGATGTAAGTGAAAT+TGG 0.300443 8_1:-82440566 Msa1219530:CDS
TAACTACATATCACTTGAAT+TGG 0.301558 8_1:-82441014 Msa1219530:CDS
CAGGTATATAATAAGGAGTT+TGG 0.304931 8_1:-82439654 Msa1219530:CDS
TTCCTCTTTACAAACGGTTC+TGG 0.309806 8_1:+82439454 None:intergenic
TTTCCAAGTGCAAATCATAA+AGG 0.319956 8_1:-82440196 Msa1219530:CDS
GAAGTTTCATCCACAAATAT+TGG 0.331515 8_1:-82442799 Msa1219530:five_prime_UTR
TTTAATTCAGGTATATAATA+AGG 0.339845 8_1:-82439661 Msa1219530:CDS
AGAGGAGAGCTTTGAAGAAC+AGG 0.345980 8_1:+82442416 None:intergenic
GTGGATGATATCTCAGTTAA+AGG 0.351684 8_1:-82440839 Msa1219530:CDS
TGCATCTAGAGTAGACATTC+TGG 0.356083 8_1:-82441224 Msa1219530:CDS
TCCACATAAAGATATGAATA+AGG 0.356386 8_1:+82440965 None:intergenic
GTTTCTTATTCAACTTTCAT+TGG 0.365023 8_1:+82442836 None:intergenic
GGCAAATCTTATACAACAAT+TGG 0.368357 8_1:+82439565 None:intergenic
GGATTTCTTTCCACATAGAT+TGG 0.373050 8_1:+82440651 None:intergenic
AATGCATTATCTCCAGACTT+AGG 0.376086 8_1:+82440716 None:intergenic
AGGTTCTGCTACTGCTCATT+TGG 0.380091 8_1:-82441275 Msa1219530:CDS
CTGGAGAGAGAGCGTGCTAC+AGG 0.382710 8_1:-82440688 Msa1219530:CDS
TTCCAAGTGCAAATCATAAA+GGG 0.388198 8_1:-82440195 Msa1219530:CDS
TGGGAGGACTAGACCCTTGA+TGG 0.390942 8_1:-82440546 Msa1219530:CDS
GATTATATTGCCAGGCCAAA+AGG 0.405490 8_1:-82440614 Msa1219530:CDS
ACAGATAAGAACTACTGAAA+TGG 0.407491 8_1:-82440519 Msa1219530:CDS
TGATGAATACAAGAAAATAT+TGG 0.408026 8_1:-82439715 Msa1219530:CDS
TAAGCGGTGGTGAGTGGTAG+TGG 0.408658 8_1:+82442640 None:intergenic
AGATGATAGTGGTTTAATTC+AGG 0.409345 8_1:-82439673 Msa1219530:CDS
CATATCTTTATGTGGATACA+TGG 0.412806 8_1:-82440958 Msa1219530:CDS
CGAGATGGTTCGTAATTTAG+AGG 0.415458 8_1:-82439745 Msa1219530:CDS
AGCCAGAACCGTTTGTAAAG+AGG 0.417258 8_1:-82439456 Msa1219530:three_prime_UTR
ACCCTCAACCTATCCTTAAA+GGG 0.428322 8_1:-82439496 Msa1219530:three_prime_UTR
TTGAGAGAGGTGTTGGAAGT+AGG 0.431304 8_1:-82441331 Msa1219530:CDS
GAAAGAGGAGAGCGACCATC+AGG 0.433390 8_1:+82442389 None:intergenic
CACAATGAAGAAGCTCTTGA+AGG 0.442293 8_1:-82440795 Msa1219530:CDS
ATGCATTATCTCCAGACTTA+GGG 0.442953 8_1:+82440717 None:intergenic
ATGGTGGCGCGTGGGGTAAT+CGG 0.443215 8_1:+82442679 None:intergenic
TCCCATACTTGCGGAATTAG+TGG 0.444671 8_1:-82440858 Msa1219530:CDS
ATGATCTGCTGCTGATACCT+TGG 0.450610 8_1:+82441088 None:intergenic
CATGGCAATGGATAAAGCTT+TGG 0.451814 8_1:+82442367 None:intergenic
AAACACAACACCAATATTTG+TGG 0.453363 8_1:+82442789 None:intergenic
AAGAAAACACTAACCTCCTC+TGG 0.456445 8_1:+82440437 None:intergenic
TCCTTATTCATATCTTTATG+TGG 0.459286 8_1:-82440966 Msa1219530:CDS
ATGTCATGTGCATCTTCTCC+TGG 0.459375 8_1:+82440067 None:intergenic
AAAATATTCCTCTTTACAAA+CGG 0.460364 8_1:+82439448 None:intergenic
CTTGACATGATGAGGCATCT+TGG 0.461356 8_1:-82441118 Msa1219530:CDS
GCGTGTGCTGTAGAAGTTCC+CGG 0.463247 8_1:-82442554 Msa1219530:CDS
TCTTATCTGTATTTCCATCA+AGG 0.463566 8_1:+82440532 None:intergenic
TTCTCGACAAGAACGGAGAT+GGG 0.464209 8_1:-82440138 Msa1219530:CDS
CATGAAGTTCGAAGTCAGAT+AGG 0.464988 8_1:-82441295 Msa1219530:CDS
TGGATACAAAAGTTTGCATA+TGG 0.465288 8_1:-82440588 Msa1219530:CDS
GAGCGACCATCAGGAGTAAG+AGG 0.466122 8_1:+82442398 None:intergenic
GGAACTTACAGAGGTGATAG+AGG 0.467883 8_1:-82440101 Msa1219530:CDS
CTTCATATGGCAGATGATAG+TGG 0.471188 8_1:-82439684 Msa1219530:CDS
ATTATATTGCCAGGCCAAAA+GGG 0.474542 8_1:-82440613 Msa1219530:CDS
GTGACGCGGGTGGGTCGAGT+GGG 0.475192 8_1:+82442602 None:intergenic
TGCTCCTCTTGCTCATGCTG+TGG 0.479821 8_1:-82441041 Msa1219530:CDS
ATAATAAGGAGTTTGGCAAC+AGG 0.480517 8_1:-82439647 Msa1219530:CDS
CCCCTTTAAGGATAGGTTGA+GGG 0.481740 8_1:+82439495 None:intergenic
GTGTTATCCACAAGTTCCTC+TGG 0.484331 8_1:-82442470 Msa1219530:CDS
TGAATGTAATGTAATGTTGT+TGG 0.484720 8_1:+82442755 None:intergenic
AGCTCTCCTCTTACTCCTGA+TGG 0.487226 8_1:-82442404 Msa1219530:CDS
GGAGATAATGCATTGGAAGC+TGG 0.491096 8_1:-82440707 Msa1219530:CDS
ACGGTGAGTTTAGGAGAGTA+TGG 0.491382 8_1:-82442889 None:intergenic
CTTCTCGACAAGAACGGAGA+TGG 0.492481 8_1:-82440139 Msa1219530:CDS
GGTGACGCGGGTGGGTCGAG+TGG 0.492820 8_1:+82442601 None:intergenic
ATTGGATGAGAAACTTCATA+TGG 0.494227 8_1:-82439697 Msa1219530:CDS
GTGGTGTTGAACCCTAAGTC+TGG 0.496487 8_1:-82440728 Msa1219530:CDS
TGTGGAAAGAAATCCCTTCT+CGG 0.498703 8_1:-82440643 Msa1219530:CDS
TCTCCTCTCTCTTCTTCTAG+TGG 0.501351 8_1:+82442860 None:intergenic
CAGTGGATGTAAGTGAAATT+GGG 0.501702 8_1:-82440565 Msa1219530:CDS
TGGTTTGTTTGAGAAGAGAA+TGG 0.502046 8_1:+82442660 None:intergenic
GATGCAGAAGTTATATCTGC+TGG 0.508548 8_1:-82441358 Msa1219530:CDS
TATCACCATCTTTCCTCCAC+CGG 0.511134 8_1:+82442535 None:intergenic
ACTCGACCCACCCGCGTCAC+CGG 0.513152 8_1:-82442599 Msa1219530:CDS
TGAGAGTAAGCGGTGGTGAG+TGG 0.513797 8_1:+82442634 None:intergenic
GGATACATGGTTGAGAAGTC+AGG 0.514914 8_1:-82440945 Msa1219530:CDS
ATAGAGGAGCTTGGTGCACC+AGG 0.521684 8_1:-82440085 Msa1219530:CDS
ACGCTCTCGGAGTGGACCAC+CGG 0.522401 8_1:+82442573 None:intergenic
CTTATCTGTATTTCCATCAA+GGG 0.524648 8_1:+82440533 None:intergenic
CCGGAGACCGGTGACGCGGG+TGG 0.524804 8_1:+82442592 None:intergenic
ATCCCTTTATGATTTGCACT+TGG 0.525949 8_1:+82440193 None:intergenic
GCTCCTCTTGCTCATGCTGT+GGG 0.528069 8_1:-82441040 Msa1219530:CDS
CAAAAGTTTGCATATGGCAG+TGG 0.532210 8_1:-82440582 Msa1219530:CDS
CCACCCGCGTCACCGGTCTC+CGG 0.535267 8_1:-82442592 Msa1219530:CDS
AGTTCCCGGTGGAGGAAAGA+TGG 0.535806 8_1:-82442540 Msa1219530:CDS
ATTGCCAGGCCAAAAGGGAA+TGG 0.535893 8_1:-82440608 Msa1219530:CDS
ATGGATAGGTTAGCTGTTGG+TGG 0.537695 8_1:-82440500 Msa1219530:CDS
TCTCATTCATTATACAAGGC+TGG 0.539860 8_1:-82440470 Msa1219530:CDS
AAGAAGACCAGAGGAACTTG+TGG 0.542935 8_1:+82442463 None:intergenic
TCTCTCTTCTTCTAGTGGAG+TGG 0.543876 8_1:+82442865 None:intergenic
CTTCTTGACTCGAACAGTGA+TGG 0.544084 8_1:-82440037 Msa1219530:CDS
TTTCGCCTTCTCGACAAGAA+CGG 0.544865 8_1:-82440145 Msa1219530:CDS
CATCTCCGTTCTTGTCGAGA+AGG 0.545112 8_1:+82440140 None:intergenic
GGCATCTTGGTCACCTTCCA+AGG 0.547221 8_1:-82441105 Msa1219530:CDS
ATGGATAAAGCTTTGGAAAG+AGG 0.547465 8_1:+82442374 None:intergenic
TAGGTTAGCTGTTGGTGGAA+TGG 0.547704 8_1:-82440495 Msa1219530:CDS
ACTTCTACAGCACACGCTCT+CGG 0.548640 8_1:+82442560 None:intergenic
CGGAGTGGACCACCGGAGAC+CGG 0.548762 8_1:+82442580 None:intergenic
GGACTAAAGATTATATTGCC+AGG 0.550792 8_1:-82440622 Msa1219530:CDS
CTGAAATTCATCAGAGCTGA+GGG 0.550894 8_1:+82440012 None:intergenic
GGAAGAAGAGTGAGAGTAAG+CGG 0.551427 8_1:+82442624 None:intergenic
TCCACTAATTCCGCAAGTAT+GGG 0.553251 8_1:+82440857 None:intergenic
GCTGTAGAAGTTCCCGGTGG+AGG 0.555769 8_1:-82442548 Msa1219530:CDS
GAAACTTCATCTTGTCGTTG+CGG 0.556978 8_1:+82442814 None:intergenic
TGACGCGGGTGGGTCGAGTG+GGG 0.558230 8_1:+82442603 None:intergenic
ATCAGCGAGAAGCATGGCAA+TGG 0.559213 8_1:+82442355 None:intergenic
ATCAAATCATCCAATCTATG+TGG 0.562146 8_1:-82440661 Msa1219530:CDS
GAAGATGTAAATGATGTGCT+TGG 0.567130 8_1:-82440758 Msa1219530:CDS
CTTTGAAGCTTGACATGATG+AGG 0.569527 8_1:-82441126 Msa1219530:CDS
AGAGCTTTGAAGAACAGGAA+TGG 0.570567 8_1:+82442421 None:intergenic
TGGAATATTGAGAGAGGTGT+TGG 0.571119 8_1:-82441338 Msa1219530:CDS
AGTATCCTATAAGATATTCG+TGG 0.573789 8_1:+82439540 None:intergenic
TAAGAACTACTGAAATGGAT+AGG 0.574391 8_1:-82440514 Msa1219530:CDS
TATAATCTTTAGTCCGAGAA+GGG 0.574454 8_1:+82440630 None:intergenic
GGCATCTCATTCATTATACA+AGG 0.575422 8_1:-82440474 Msa1219530:CDS
GAGAAGAGAATGGTGGCGCG+TGG 0.575660 8_1:+82442670 None:intergenic
CTCACTTAGATAATCTATTG+TGG 0.576514 8_1:-82439519 Msa1219530:three_prime_UTR
TTCAGCTGCAGCCAGCATGA+TGG 0.579396 8_1:+82440243 None:intergenic
AGAAGAGAATGGTGGCGCGT+GGG 0.580259 8_1:+82442671 None:intergenic
ATCACCATCTTTCCTCCACC+GGG 0.581759 8_1:+82442536 None:intergenic
ACCACCGGAGACCGGTGACG+CGG 0.582141 8_1:+82442588 None:intergenic
ATGAAGAAGCTCTTGAAGGA+TGG 0.584555 8_1:-82440791 Msa1219530:CDS
ATATAATCTTTAGTCCGAGA+AGG 0.585270 8_1:+82440629 None:intergenic
AGAAGAGTGAGAGTAAGCGG+TGG 0.586254 8_1:+82442627 None:intergenic
TGGTTGAGAAGTCAGGAGAC+AGG 0.587107 8_1:-82440938 Msa1219530:CDS
ATTCCCACAGCATGAGCAAG+AGG 0.587161 8_1:+82441037 None:intergenic
CGGAGACCGGTGACGCGGGT+GGG 0.591943 8_1:+82442593 None:intergenic
TAAGTCTGGAGATAATGCAT+TGG 0.596696 8_1:-82440714 Msa1219530:CDS
GCGTTTAAAGACCATCATGC+TGG 0.599824 8_1:-82440254 Msa1219530:CDS
CCACCGGAGACCGGTGACGC+GGG 0.602844 8_1:+82442589 None:intergenic
AGAAGCTCTTGAAGGATGGT+CGG 0.606805 8_1:-82440787 Msa1219530:CDS
TGGAGAGAGAGCGTGCTACA+GGG 0.607107 8_1:-82440687 Msa1219530:CDS
TCCTATAAGATATTCGTGGA+AGG 0.611103 8_1:+82439544 None:intergenic
GAAGAGAATGGTGGCGCGTG+GGG 0.611821 8_1:+82442672 None:intergenic
TACAGCACACGCTCTCGGAG+TGG 0.612388 8_1:+82442565 None:intergenic
ACAGAGGTGATAGAGGAGCT+TGG 0.612835 8_1:-82440094 Msa1219530:CDS
AAAATCTGATCCCATACTTG+CGG 0.616260 8_1:-82440867 Msa1219530:CDS
CCCGCGTCACCGGTCTCCGG+TGG 0.617971 8_1:-82442589 Msa1219530:CDS
CCCTCAACCTATCCTTAAAG+GGG 0.621541 8_1:-82439495 Msa1219530:three_prime_UTR
TCTGCTGCTGATACCTTGGA+AGG 0.625070 8_1:+82441092 None:intergenic
CTGAAGATCAGCGAGAAGCA+TGG 0.633168 8_1:+82442349 None:intergenic
TGATTTGACTGAGAGGATGA+AGG 0.637086 8_1:-82442492 Msa1219530:CDS
CTTTCAATGATTTGACTGAG+AGG 0.637305 8_1:-82442499 Msa1219530:CDS
TCTGAAATTCATCAGAGCTG+AGG 0.641418 8_1:+82440011 None:intergenic
AGATGGGAAGATAAGCATTG+AGG 0.649781 8_1:-82440122 Msa1219530:CDS
ATCTGCTGGAATATTGAGAG+AGG 0.655258 8_1:-82441344 Msa1219530:CDS
GGCTGGTCTTACTAATCCAG+AGG 0.657487 8_1:-82440453 Msa1219530:CDS
AAGATGGTGATAGAGCTTGT+CGG 0.658286 8_1:-82442524 Msa1219530:CDS
TGATGTGCTTGGACTGCGAG+TGG 0.660485 8_1:-82440747 Msa1219530:CDS
TGGTCTTACTAATCCAGAGG+AGG 0.668643 8_1:-82440450 Msa1219530:intron
GCGTGGGGTAATCGGAAGCG+TGG 0.673355 8_1:+82442687 None:intergenic
TGATTTGAAAAGAAGACCAG+AGG 0.678594 8_1:+82442454 None:intergenic
TGGATGTAAGTGAAATTGGG+AGG 0.681330 8_1:-82440562 Msa1219530:CDS
TTTGTTTGAGAAGAGAATGG+TGG 0.686445 8_1:+82442663 None:intergenic
AAGCATTGAGGAACTTACAG+AGG 0.688318 8_1:-82440110 Msa1219530:CDS
ACTCCACTAGAAGAAGAGAG+AGG 0.694188 8_1:-82442863 Msa1219530:five_prime_UTR
GAAATGGATAGGTTAGCTGT+TGG 0.706251 8_1:-82440503 Msa1219530:CDS
TTGAGAAGTCAGGAGACAGG+TGG 0.721078 8_1:-82440935 Msa1219530:CDS
CCTCAACCTATCCTTAAAGG+GGG 0.725183 8_1:-82439494 Msa1219530:three_prime_UTR
TGTGCTGTAGAAGTTCCCGG+TGG 0.767826 8_1:-82442551 Msa1219530:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTATCGTTAAAAAATTTAAT+TGG + chr8_1:82440057-82440076 None:intergenic 15.0%
!!! TAAGAAAATATTCCTTTTTT+AGG - chr8_1:82440135-82440154 Msa1219530:CDS 15.0%
!!! TAAAAAAAAGATTCCTTTTT+AGG - chr8_1:82440173-82440192 Msa1219530:CDS 15.0%
!!! TCTATTTGTTTTATTAGTTA+AGG + chr8_1:82440445-82440464 None:intergenic 15.0%
!! ATAATGTTAGATAATAGATA+TGG - chr8_1:82440488-82440507 Msa1219530:CDS 15.0%
!!! GCAATTGATTTTAAATAATT+TGG + chr8_1:82440674-82440693 None:intergenic 15.0%
!! TACTATAAAGAAACAATAAA+CGG + chr8_1:82440889-82440908 None:intergenic 15.0%
!! TTTAATTCAGGTATATAATA+AGG - chr8_1:82442622-82442641 Msa1219530:CDS 15.0%
!! ATGAAAATGAATGAAAGTAA+TGG + chr8_1:82439967-82439986 None:intergenic 20.0%
!! AAGTCAATAAATAGTAATCA+TGG + chr8_1:82440079-82440098 None:intergenic 20.0%
!!! TATTTTCTTATATTTCAGAC+CGG + chr8_1:82440125-82440144 None:intergenic 20.0%
!! ATTATTCAATGAACCTAAAA+AGG + chr8_1:82440189-82440208 None:intergenic 20.0%
!!! TATTTTCTTATATTTGAGAC+CGG - chr8_1:82440272-82440291 Msa1219530:intron 20.0%
!! AATATTGTGGTATACATATA+AGG - chr8_1:82440299-82440318 Msa1219530:intron 20.0%
!!! ATAATTGATTTTGACATGTT+TGG - chr8_1:82440572-82440591 Msa1219530:CDS 20.0%
!!! TGTTTTATTTTTTGATACTC+AGG - chr8_1:82442002-82442021 Msa1219530:intron 20.0%
!! AGTTGTACATAATTTCTTAA+TGG - chr8_1:82442396-82442415 Msa1219530:CDS 20.0%
!! TGATGAATACAAGAAAATAT+TGG - chr8_1:82442568-82442587 Msa1219530:CDS 20.0%
!! AAAATATTCCTCTTTACAAA+CGG + chr8_1:82442838-82442857 None:intergenic 20.0%
! GTTTCTTATTCAACTTTCAT+TGG + chr8_1:82439450-82439469 None:intergenic 25.0%
! TGAATGTAATGTAATGTTGT+TGG + chr8_1:82439531-82439550 None:intergenic 25.0%
! AACAAATAGATAAGCTTAGA+AGG - chr8_1:82440455-82440474 Msa1219530:CDS 25.0%
! CAAGTTAGAATCAATTATAG+AGG + chr8_1:82440623-82440642 None:intergenic 25.0%
!! AATTTCAGTAAGAGTTTGTT+TGG + chr8_1:82440831-82440850 None:intergenic 25.0%
! TAACTACATATCACTTGAAT+TGG - chr8_1:82441269-82441288 Msa1219530:CDS 25.0%
! TCCTTATTCATATCTTTATG+TGG - chr8_1:82441317-82441336 Msa1219530:CDS 25.0%
! TCCACATAAAGATATGAATA+AGG + chr8_1:82441321-82441340 None:intergenic 25.0%
GAAGTTTCATCCACAAATAT+TGG - chr8_1:82439484-82439503 Msa1219530:three_prime_UTR 30.0%
AAACACAACACCAATATTTG+TGG + chr8_1:82439497-82439516 None:intergenic 30.0%
! AAGTGTAAGAGTTCCATTTT+TGG + chr8_1:82439576-82439595 None:intergenic 30.0%
TTGAGACTTGAACCTAAAAA+AGG + chr8_1:82440150-82440169 None:intergenic 30.0%
CATTGAGTAGTTAATGTATG+TGG + chr8_1:82440237-82440256 None:intergenic 30.0%
!! AATTTGACATTTTGAGAGCA+AGG - chr8_1:82440340-82440359 Msa1219530:intron 30.0%
ATAATTTGGTTATGTGTCTC+TGG + chr8_1:82440660-82440679 None:intergenic 30.0%
TTGCAGTTAACAAAACACAT+AGG - chr8_1:82440690-82440709 Msa1219530:CDS 30.0%
AACAGCTACTATACTCTTAA+TGG + chr8_1:82440729-82440748 None:intergenic 30.0%
CAATGAAATTATGACACTCA+AGG + chr8_1:82440866-82440885 None:intergenic 30.0%
ATAGTAAATGTGATTGCAGA+TGG - chr8_1:82440903-82440922 Msa1219530:CDS 30.0%
!! TGACATTAGAGCTTTGATTT+TGG - chr8_1:82441128-82441147 Msa1219530:CDS 30.0%
CATATCTTTATGTGGATACA+TGG - chr8_1:82441325-82441344 Msa1219530:CDS 30.0%
ATCAAATCATCCAATCTATG+TGG - chr8_1:82441622-82441641 Msa1219530:intron 30.0%
TATAATCTTTAGTCCGAGAA+GGG + chr8_1:82441656-82441675 None:intergenic 30.0%
ATATAATCTTTAGTCCGAGA+AGG + chr8_1:82441657-82441676 None:intergenic 30.0%
TGGATACAAAAGTTTGCATA+TGG - chr8_1:82441695-82441714 Msa1219530:intron 30.0%
CTTATCTGTATTTCCATCAA+GGG + chr8_1:82441753-82441772 None:intergenic 30.0%
TCTTATCTGTATTTCCATCA+AGG + chr8_1:82441754-82441773 None:intergenic 30.0%
ACAGATAAGAACTACTGAAA+TGG - chr8_1:82441764-82441783 Msa1219530:intron 30.0%
TAAGAACTACTGAAATGGAT+AGG - chr8_1:82441769-82441788 Msa1219530:intron 30.0%
CTTGCAAAGATGAATGAATA+CGG + chr8_1:82441881-82441900 None:intergenic 30.0%
! TTTTTCATGTCTAAGGAGTT+AGG + chr8_1:82441963-82441982 None:intergenic 30.0%
!! TTCCTTCTTTTTCATGTCTA+AGG + chr8_1:82441970-82441989 None:intergenic 30.0%
GACATGAAAAAGAAGGAAAT+TGG - chr8_1:82441972-82441991 Msa1219530:intron 30.0%
TTGCACTTGGAAAATCTTTA+AGG + chr8_1:82442080-82442099 None:intergenic 30.0%
TTTCCAAGTGCAAATCATAA+AGG - chr8_1:82442087-82442106 Msa1219530:intron 30.0%
TTCCAAGTGCAAATCATAAA+GGG - chr8_1:82442088-82442107 Msa1219530:intron 30.0%
ATTTCAGATGTTCCAAAAAC+AGG - chr8_1:82442287-82442306 Msa1219530:intron 30.0%
TAGCTCAAGTATATATGCTT+TGG + chr8_1:82442438-82442457 None:intergenic 30.0%
TATGTAACTCTAGTGGTATT+TGG - chr8_1:82442505-82442524 Msa1219530:CDS 30.0%
ATTGGATGAGAAACTTCATA+TGG - chr8_1:82442586-82442605 Msa1219530:CDS 30.0%
!! AGATGATAGTGGTTTAATTC+AGG - chr8_1:82442610-82442629 Msa1219530:CDS 30.0%
CAGGTATATAATAAGGAGTT+TGG - chr8_1:82442629-82442648 Msa1219530:CDS 30.0%
GGCAAATCTTATACAACAAT+TGG + chr8_1:82442721-82442740 None:intergenic 30.0%
AGTATCCTATAAGATATTCG+TGG + chr8_1:82442746-82442765 None:intergenic 30.0%
CTCACTTAGATAATCTATTG+TGG - chr8_1:82442764-82442783 Msa1219530:five_prime_UTR 30.0%
ACTACGCATTGAACCAAAAA+TGG - chr8_1:82439560-82439579 Msa1219530:three_prime_UTR 35.0%
TTTGTTTGAGAAGAGAATGG+TGG + chr8_1:82439623-82439642 None:intergenic 35.0%
!! TGGTTTGTTTGAGAAGAGAA+TGG + chr8_1:82439626-82439645 None:intergenic 35.0%
CTTTCAATGATTTGACTGAG+AGG - chr8_1:82439784-82439803 Msa1219530:intron 35.0%
TGATTTGAAAAGAAGACCAG+AGG + chr8_1:82439832-82439851 None:intergenic 35.0%
!! ATGGATAAAGCTTTGGAAAG+AGG + chr8_1:82439912-82439931 None:intergenic 35.0%
TTCTTATATTTCAGACCGGA+GGG + chr8_1:82440121-82440140 None:intergenic 35.0%
TTTCTTATATTTCAGACCGG+AGG + chr8_1:82440122-82440141 None:intergenic 35.0%
! TTTCTTATATTTGAGACCGG+AGG - chr8_1:82440275-82440294 Msa1219530:intron 35.0%
! TTCTTATATTTGAGACCGGA+GGG - chr8_1:82440276-82440295 Msa1219530:intron 35.0%
!! AGTGTTGTTTAGTCTCAGTT+TGG - chr8_1:82440368-82440387 Msa1219530:intron 35.0%
!! TAAGCTTAGAAGGTTGATGA+TGG - chr8_1:82440465-82440484 Msa1219530:CDS 35.0%
TTTCACCAAACACACATGTA+AGG + chr8_1:82440539-82440558 None:intergenic 35.0%
!! TGTGTGTTTGGTGAAACTTT+TGG - chr8_1:82440543-82440562 Msa1219530:CDS 35.0%
!! TAGAGCTTTGATTTTGGACT+TGG - chr8_1:82441134-82441153 Msa1219530:CDS 35.0%
AAAATCTGATCCCATACTTG+CGG - chr8_1:82441416-82441435 Msa1219530:intron 35.0%
GTGGATGATATCTCAGTTAA+AGG - chr8_1:82441444-82441463 Msa1219530:intron 35.0%
AGCACATCATTTACATCTTC+TGG + chr8_1:82441525-82441544 None:intergenic 35.0%
GAAGATGTAAATGATGTGCT+TGG - chr8_1:82441525-82441544 Msa1219530:intron 35.0%
ATGCATTATCTCCAGACTTA+GGG + chr8_1:82441569-82441588 None:intergenic 35.0%
AATGCATTATCTCCAGACTT+AGG + chr8_1:82441570-82441589 None:intergenic 35.0%
TAAGTCTGGAGATAATGCAT+TGG - chr8_1:82441569-82441588 Msa1219530:intron 35.0%
GGATTTCTTTCCACATAGAT+TGG + chr8_1:82441635-82441654 None:intergenic 35.0%
GGACTAAAGATTATATTGCC+AGG - chr8_1:82441661-82441680 Msa1219530:intron 35.0%
ATTATATTGCCAGGCCAAAA+GGG - chr8_1:82441670-82441689 Msa1219530:intron 35.0%
! CTTTTGTATCCATTCCCTTT+TGG + chr8_1:82441687-82441706 None:intergenic 35.0%
CAGTGGATGTAAGTGAAATT+GGG - chr8_1:82441718-82441737 Msa1219530:intron 35.0%
GGCATCTCATTCATTATACA+AGG - chr8_1:82441809-82441828 Msa1219530:intron 35.0%
TCTCATTCATTATACAAGGC+TGG - chr8_1:82441813-82441832 Msa1219530:intron 35.0%
CTCCTTAGACATGAAAAAGA+AGG - chr8_1:82441965-82441984 Msa1219530:intron 35.0%
! ATCCCTTTATGATTTGCACT+TGG + chr8_1:82442093-82442112 None:intergenic 35.0%
! GACATCAAATCACCTGTTTT+TGG + chr8_1:82442302-82442321 None:intergenic 35.0%
AGGTGATTTGATGTCTTATC+AGG - chr8_1:82442307-82442326 Msa1219530:intron 35.0%
! TGCTTTGGTAATCAGATAGT+TGG + chr8_1:82442423-82442442 None:intergenic 35.0%
TTACATACAACTCATGAGAC+AGG + chr8_1:82442492-82442511 None:intergenic 35.0%
TGAGTTGTATGTAACTCTAG+TGG - chr8_1:82442498-82442517 Msa1219530:CDS 35.0%
!!! CTAGTGGTATTTGGTTTTGT+AGG - chr8_1:82442514-82442533 Msa1219530:CDS 35.0%
ATAATAAGGAGTTTGGCAAC+AGG - chr8_1:82442636-82442655 Msa1219530:CDS 35.0%
TCCTATAAGATATTCGTGGA+AGG + chr8_1:82442742-82442761 None:intergenic 35.0%
GAAACTTCATCTTGTCGTTG+CGG + chr8_1:82439472-82439491 None:intergenic 40.0%
AAGATGGTGATAGAGCTTGT+CGG - chr8_1:82439759-82439778 Msa1219530:intron 40.0%
TGATTTGACTGAGAGGATGA+AGG - chr8_1:82439791-82439810 Msa1219530:intron 40.0%
!! AGAGCTTTGAAGAACAGGAA+TGG + chr8_1:82439865-82439884 None:intergenic 40.0%
CATGGCAATGGATAAAGCTT+TGG + chr8_1:82439919-82439938 None:intergenic 40.0%
GTATACCACAATATTCCCTC+CGG + chr8_1:82440294-82440313 None:intergenic 40.0%
!! TGACATTTTGAGAGCAAGGA+AGG - chr8_1:82440344-82440363 Msa1219530:intron 40.0%
GTTGACCTTACATGTGTGTT+TGG - chr8_1:82440531-82440550 Msa1219530:CDS 40.0%
!! GTGTTTGGTGAAACTTTTGG+AGG - chr8_1:82440546-82440565 Msa1219530:CDS 40.0%
GATGCAGAAGTTATATCTGC+TGG - chr8_1:82440925-82440944 Msa1219530:CDS 40.0%
ATCTGCTGGAATATTGAGAG+AGG - chr8_1:82440939-82440958 Msa1219530:CDS 40.0%
! TGGAATATTGAGAGAGGTGT+TGG - chr8_1:82440945-82440964 Msa1219530:CDS 40.0%
CATGAAGTTCGAAGTCAGAT+AGG - chr8_1:82440988-82441007 Msa1219530:CDS 40.0%
! TGCATCTAGAGTAGACATTC+TGG - chr8_1:82441059-82441078 Msa1219530:CDS 40.0%
!! CTTTGAAGCTTGACATGATG+AGG - chr8_1:82441157-82441176 Msa1219530:CDS 40.0%
TCCACTAATTCCGCAAGTAT+GGG + chr8_1:82441429-82441448 None:intergenic 40.0%
ATCCACTAATTCCGCAAGTA+TGG + chr8_1:82441430-82441449 None:intergenic 40.0%
CACAATGAAGAAGCTCTTGA+AGG - chr8_1:82441488-82441507 Msa1219530:intron 40.0%
ATGAAGAAGCTCTTGAAGGA+TGG - chr8_1:82441492-82441511 Msa1219530:intron 40.0%
TGTGGAAAGAAATCCCTTCT+CGG - chr8_1:82441640-82441659 Msa1219530:intron 40.0%
GATTATATTGCCAGGCCAAA+AGG - chr8_1:82441669-82441688 Msa1219530:intron 40.0%
CAAAAGTTTGCATATGGCAG+TGG - chr8_1:82441701-82441720 Msa1219530:intron 40.0%
GCAGTGGATGTAAGTGAAAT+TGG - chr8_1:82441717-82441736 Msa1219530:intron 40.0%
TGGATGTAAGTGAAATTGGG+AGG - chr8_1:82441721-82441740 Msa1219530:intron 40.0%
! GAAATGGATAGGTTAGCTGT+TGG - chr8_1:82441780-82441799 Msa1219530:intron 40.0%
AAGAAAACACTAACCTCCTC+TGG + chr8_1:82441849-82441868 None:intergenic 40.0%
TCTAAGGAGTTAGGTCTAGA+TGG + chr8_1:82441954-82441973 None:intergenic 40.0%
! AGATGGGAAGATAAGCATTG+AGG - chr8_1:82442161-82442180 Msa1219530:intron 40.0%
!! AAGCATTGAGGAACTTACAG+AGG - chr8_1:82442173-82442192 Msa1219530:intron 40.0%
CTGAAATTCATCAGAGCTGA+GGG + chr8_1:82442274-82442293 None:intergenic 40.0%
! TCTGAAATTCATCAGAGCTG+AGG + chr8_1:82442275-82442294 None:intergenic 40.0%
!!! TTTGGTTTTGTAGGTCGAGA+TGG - chr8_1:82442523-82442542 Msa1219530:CDS 40.0%
CGAGATGGTTCGTAATTTAG+AGG - chr8_1:82442538-82442557 Msa1219530:CDS 40.0%
CTTCATATGGCAGATGATAG+TGG - chr8_1:82442599-82442618 Msa1219530:CDS 40.0%
GCCTTCCACGAATATCTTAT+AGG - chr8_1:82442738-82442757 Msa1219530:five_prime_UTR 40.0%
ACCCTCAACCTATCCTTAAA+GGG - chr8_1:82442787-82442806 Msa1219530:five_prime_UTR 40.0%
!! TTTTCACCCCCTTTAAGGAT+AGG + chr8_1:82442798-82442817 None:intergenic 40.0%
! GACTATTTTCACCCCCTTTA+AGG + chr8_1:82442803-82442822 None:intergenic 40.0%
TTCCTCTTTACAAACGGTTC+TGG + chr8_1:82442832-82442851 None:intergenic 40.0%
TCTCTCTTCTTCTAGTGGAG+TGG + chr8_1:82439421-82439440 None:intergenic 45.0%
ACTCCACTAGAAGAAGAGAG+AGG - chr8_1:82439420-82439439 Msa1219530:three_prime_UTR 45.0%
TCTCCTCTCTCTTCTTCTAG+TGG + chr8_1:82439426-82439445 None:intergenic 45.0%
GGAAGAAGAGTGAGAGTAAG+CGG + chr8_1:82439662-82439681 None:intergenic 45.0%
TATCACCATCTTTCCTCCAC+CGG + chr8_1:82439751-82439770 None:intergenic 45.0%
GTGTTATCCACAAGTTCCTC+TGG - chr8_1:82439813-82439832 Msa1219530:intron 45.0%
AAGAAGACCAGAGGAACTTG+TGG + chr8_1:82439823-82439842 None:intergenic 45.0%
!! AGAGGAGAGCTTTGAAGAAC+AGG + chr8_1:82439870-82439889 None:intergenic 45.0%
TCTTAAACTTCTCCTCCCTC+CGG - chr8_1:82440103-82440122 Msa1219530:CDS 45.0%
TTATATTTCAGACCGGAGGG+AGG + chr8_1:82440118-82440137 None:intergenic 45.0%
!! TTGAGAGAGGTGTTGGAAGT+AGG - chr8_1:82440952-82440971 Msa1219530:CDS 45.0%
AGGTTCTGCTACTGCTCATT+TGG - chr8_1:82441008-82441027 Msa1219530:CDS 45.0%
! CTTGACATGATGAGGCATCT+TGG - chr8_1:82441165-82441184 Msa1219530:CDS 45.0%
ATGATCTGCTGCTGATACCT+TGG + chr8_1:82441198-82441217 None:intergenic 45.0%
GGATACATGGTTGAGAAGTC+AGG - chr8_1:82441338-82441357 Msa1219530:CDS 45.0%
TCCCATACTTGCGGAATTAG+TGG - chr8_1:82441425-82441444 Msa1219530:intron 45.0%
AGAAGCTCTTGAAGGATGGT+CGG - chr8_1:82441496-82441515 Msa1219530:intron 45.0%
GGAGATAATGCATTGGAAGC+TGG - chr8_1:82441576-82441595 Msa1219530:intron 45.0%
! ATGGATAGGTTAGCTGTTGG+TGG - chr8_1:82441783-82441802 Msa1219530:intron 45.0%
! TAGGTTAGCTGTTGGTGGAA+TGG - chr8_1:82441788-82441807 Msa1219530:intron 45.0%
! TGGTCTTACTAATCCAGAGG+AGG - chr8_1:82441833-82441852 Msa1219530:intron 45.0%
GCGTTTAAAGACCATCATGC+TGG - chr8_1:82442029-82442048 Msa1219530:intron 45.0%
TTTCGCCTTCTCGACAAGAA+CGG - chr8_1:82442138-82442157 Msa1219530:intron 45.0%
TTCTCGACAAGAACGGAGAT+GGG - chr8_1:82442145-82442164 Msa1219530:intron 45.0%
GGAACTTACAGAGGTGATAG+AGG - chr8_1:82442182-82442201 Msa1219530:intron 45.0%
ATGTCATGTGCATCTTCTCC+TGG + chr8_1:82442219-82442238 None:intergenic 45.0%
! CTTCTTGACTCGAACAGTGA+TGG - chr8_1:82442246-82442265 Msa1219530:intron 45.0%
GACCCTCAACCTATCCTTAA+AGG - chr8_1:82442786-82442805 Msa1219530:five_prime_UTR 45.0%
! CCCCTTTAAGGATAGGTTGA+GGG + chr8_1:82442791-82442810 None:intergenic 45.0%
CCCTCAACCTATCCTTAAAG+GGG - chr8_1:82442788-82442807 Msa1219530:five_prime_UTR 45.0%
CCTCAACCTATCCTTAAAGG+GGG - chr8_1:82442789-82442808 Msa1219530:five_prime_UTR 45.0%
AGCCAGAACCGTTTGTAAAG+AGG - chr8_1:82442827-82442846 Msa1219530:five_prime_UTR 45.0%
AGAAGAGTGAGAGTAAGCGG+TGG + chr8_1:82439659-82439678 None:intergenic 50.0%
ACTTCTACAGCACACGCTCT+CGG + chr8_1:82439726-82439745 None:intergenic 50.0%
ATCACCATCTTTCCTCCACC+GGG + chr8_1:82439750-82439769 None:intergenic 50.0%
AGCTCTCCTCTTACTCCTGA+TGG - chr8_1:82439879-82439898 Msa1219530:intron 50.0%
! ATCAGCGAGAAGCATGGCAA+TGG + chr8_1:82439931-82439950 None:intergenic 50.0%
CTGAAGATCAGCGAGAAGCA+TGG + chr8_1:82439937-82439956 None:intergenic 50.0%
CATGCTTCTCGCTGATCTTC+AGG - chr8_1:82439935-82439954 Msa1219530:intron 50.0%
TGAGACCGGAGGGAATATTG+TGG - chr8_1:82440286-82440305 Msa1219530:intron 50.0%
TCTGCTGCTGATACCTTGGA+AGG + chr8_1:82441194-82441213 None:intergenic 50.0%
ATTCCCACAGCATGAGCAAG+AGG + chr8_1:82441249-82441268 None:intergenic 50.0%
TGGTTGAGAAGTCAGGAGAC+AGG - chr8_1:82441345-82441364 Msa1219530:CDS 50.0%
TTGAGAAGTCAGGAGACAGG+TGG - chr8_1:82441348-82441367 Msa1219530:CDS 50.0%
! GTGGTGTTGAACCCTAAGTC+TGG - chr8_1:82441555-82441574 Msa1219530:intron 50.0%
ATTGCCAGGCCAAAAGGGAA+TGG - chr8_1:82441675-82441694 Msa1219530:intron 50.0%
! GTATCCATTCCCTTTTGGCC+TGG + chr8_1:82441682-82441701 None:intergenic 50.0%
!! GGCTGGTCTTACTAATCCAG+AGG - chr8_1:82441830-82441849 Msa1219530:intron 50.0%
CATCTCCGTTCTTGTCGAGA+AGG + chr8_1:82442146-82442165 None:intergenic 50.0%
CTTCTCGACAAGAACGGAGA+TGG - chr8_1:82442144-82442163 Msa1219530:intron 50.0%
ACAGAGGTGATAGAGGAGCT+TGG - chr8_1:82442189-82442208 Msa1219530:intron 50.0%
! CCCCCTTTAAGGATAGGTTG+AGG + chr8_1:82442792-82442811 None:intergenic 50.0%
! AGAAGAGAATGGTGGCGCGT+GGG + chr8_1:82439615-82439634 None:intergenic 55.0%
TAAGCGGTGGTGAGTGGTAG+TGG + chr8_1:82439646-82439665 None:intergenic 55.0%
TGAGAGTAAGCGGTGGTGAG+TGG + chr8_1:82439652-82439671 None:intergenic 55.0%
GCGTGTGCTGTAGAAGTTCC+CGG - chr8_1:82439729-82439748 Msa1219530:CDS 55.0%
TGTGCTGTAGAAGTTCCCGG+TGG - chr8_1:82439732-82439751 Msa1219530:CDS 55.0%
AGTTCCCGGTGGAGGAAAGA+TGG - chr8_1:82439743-82439762 Msa1219530:CDS 55.0%
GAGCGACCATCAGGAGTAAG+AGG + chr8_1:82439888-82439907 None:intergenic 55.0%
GAAAGAGGAGAGCGACCATC+AGG + chr8_1:82439897-82439916 None:intergenic 55.0%
GGCATCTTGGTCACCTTCCA+AGG - chr8_1:82441178-82441197 Msa1219530:CDS 55.0%
TGCTCCTCTTGCTCATGCTG+TGG - chr8_1:82441242-82441261 Msa1219530:CDS 55.0%
GCTCCTCTTGCTCATGCTGT+GGG - chr8_1:82441243-82441262 Msa1219530:CDS 55.0%
TGATGTGCTTGGACTGCGAG+TGG - chr8_1:82441536-82441555 Msa1219530:intron 55.0%
! TGGAGAGAGAGCGTGCTACA+GGG - chr8_1:82441596-82441615 Msa1219530:intron 55.0%
TGGGAGGACTAGACCCTTGA+TGG - chr8_1:82441737-82441756 Msa1219530:intron 55.0%
TTCAGCTGCAGCCAGCATGA+TGG + chr8_1:82442043-82442062 None:intergenic 55.0%
!! ATAGAGGAGCTTGGTGCACC+AGG - chr8_1:82442198-82442217 Msa1219530:intron 55.0%
! ATGGTGGCGCGTGGGGTAAT+CGG + chr8_1:82439607-82439626 None:intergenic 60.0%
! GAAGAGAATGGTGGCGCGTG+GGG + chr8_1:82439614-82439633 None:intergenic 60.0%
! GAGAAGAGAATGGTGGCGCG+TGG + chr8_1:82439616-82439635 None:intergenic 60.0%
TACAGCACACGCTCTCGGAG+TGG + chr8_1:82439721-82439740 None:intergenic 60.0%
GCTGTAGAAGTTCCCGGTGG+AGG - chr8_1:82439735-82439754 Msa1219530:CDS 60.0%
! CTGGAGAGAGAGCGTGCTAC+AGG - chr8_1:82441595-82441614 Msa1219530:intron 60.0%
! CATGCTGGCTGCAGCTGAAC+TGG - chr8_1:82442044-82442063 Msa1219530:intron 60.0%
GCGTGGGGTAATCGGAAGCG+TGG + chr8_1:82439599-82439618 None:intergenic 65.0%
ACGCTCTCGGAGTGGACCAC+CGG + chr8_1:82439713-82439732 None:intergenic 65.0%
TGACGCGGGTGGGTCGAGTG+GGG + chr8_1:82439683-82439702 None:intergenic 70.0%
GTGACGCGGGTGGGTCGAGT+GGG + chr8_1:82439684-82439703 None:intergenic 70.0%
ACTCGACCCACCCGCGTCAC+CGG - chr8_1:82439684-82439703 Msa1219530:CDS 70.0%
ACCACCGGAGACCGGTGACG+CGG + chr8_1:82439698-82439717 None:intergenic 70.0%
CGGAGTGGACCACCGGAGAC+CGG + chr8_1:82439706-82439725 None:intergenic 70.0%
GGTGACGCGGGTGGGTCGAG+TGG + chr8_1:82439685-82439704 None:intergenic 75.0%
CGGAGACCGGTGACGCGGGT+GGG + chr8_1:82439693-82439712 None:intergenic 75.0%
CCACCCGCGTCACCGGTCTC+CGG - chr8_1:82439691-82439710 Msa1219530:CDS 75.0%
CCACCGGAGACCGGTGACGC+GGG + chr8_1:82439697-82439716 None:intergenic 75.0%
! CCGGAGACCGGTGACGCGGG+TGG + chr8_1:82439694-82439713 None:intergenic 80.0%
! CCCGCGTCACCGGTCTCCGG+TGG - chr8_1:82439694-82439713 Msa1219530:CDS 80.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 82439401 82442904 82439401 ID=Msa1219530;Name=Msa1219530
chr8_1 mRNA 82439401 82442904 82439401 ID=Msa1219530-mRNA-1;Parent=Msa1219530;Name=Msa1219530-mRNA-1;_AED=0.15;_eAED=0.15;_QI=178|1|1|1|1|1|4|234|576
chr8_1 exon 82439401 82439769 82439401 ID=Msa1219530-mRNA-1:exon:29355;Parent=Msa1219530-mRNA-1
chr8_1 exon 82439997 82440281 82439997 ID=Msa1219530-mRNA-1:exon:29354;Parent=Msa1219530-mRNA-1
chr8_1 exon 82440451 82441383 82440451 ID=Msa1219530-mRNA-1:exon:29353;Parent=Msa1219530-mRNA-1
chr8_1 exon 82442349 82442904 82442349 ID=Msa1219530-mRNA-1:exon:29352;Parent=Msa1219530-mRNA-1
chr8_1 five_prime_UTR 82442727 82442904 82442727 ID=Msa1219530-mRNA-1:five_prime_utr;Parent=Msa1219530-mRNA-1
chr8_1 CDS 82442349 82442726 82442349 ID=Msa1219530-mRNA-1:cds;Parent=Msa1219530-mRNA-1
chr8_1 CDS 82440451 82441383 82440451 ID=Msa1219530-mRNA-1:cds;Parent=Msa1219530-mRNA-1
chr8_1 CDS 82439997 82440281 82439997 ID=Msa1219530-mRNA-1:cds;Parent=Msa1219530-mRNA-1
chr8_1 CDS 82439635 82439769 82439635 ID=Msa1219530-mRNA-1:cds;Parent=Msa1219530-mRNA-1
chr8_1 three_prime_UTR 82439401 82439634 82439401 ID=Msa1219530-mRNA-1:three_prime_utr;Parent=Msa1219530-mRNA-1
Gene Sequence

>Msa1219530

ATGGAACTCTTACACTTCCACGCTTCCGATTACCCCACGCGCCACCATTCTCTTCTCAAACAAACCACTACCACTCACCACCGCTTACTCTCACTCTTCTTCCCCACTCGACCCACCCGCGTCACCGGTCTCCGGTGGTCCACTCCGAGAGCGTGTGCTGTAGAAGTTCCCGGTGGAGGAAAGATGGTGATAGAGCTTGTCGGTGCTTTCAATGATTTGACTGAGAGGATGAAGGTGTTATCCACAAGTTCCTCTGGTCTTCTTTTCAAATCATTGAAACTCTCCATTCCTGTTCTTCAAAGCTCTCCTCTTACTCCTGATGGTCGCTCTCCTCTTTCCAAAGCTTTATCCATTGCCATGCTTCTCGCTGATCTTCAGATGGATGCAGAAGTTATATCTGCTGGAATATTGAGAGAGGTGTTGGAAGTAGGTGAGTTAAATCTACATGAAGTTCGAAGTCAGATAGGTTCTGCTACTGCTCATTTGGTGCACGAGAGTTTGCGTGTTAAGAACTTTGCATCTAGAGTAGACATTCTGGATGAAGAGAATGCTGCTGCTTTGAGAAAGTTCTGTCTCACTTACTATGACATTAGAGCTTTGATTTTGGACTTGGCTTTGAAGCTTGACATGATGAGGCATCTTGGTCACCTTCCAAGGTATCAGCAGCAGATCATTTCTCTGCAAGTTATGAAAATATATGCTCCTCTTGCTCATGCTGTGGGAATTAACTACATATCACTTGAATTGGAAGATCTCTCGTTTCAGTATTTGTTTCCTTATTCATATCTTTATGTGGATACATGGTTGAGAAGTCAGGAGACAGGTGGTATATCTCTTATCGATGTATACAAAGATGAATTGCTTCAGTCACTAAAATCTGATCCCATACTTGCGGAATTAGTGGATGATATCTCAGTTAAAGGTCGTTATAAAAGTCGTTACAGCACAATGAAGAAGCTCTTGAAGGATGGTCGGAGACCAGAAGATGTAAATGATGTGCTTGGACTGCGAGTGGTGTTGAACCCTAAGTCTGGAGATAATGCATTGGAAGCTGGAGAGAGAGCGTGCTACAGGGCTCATCAAATCATCCAATCTATGTGGAAAGAAATCCCTTCTCGGACTAAAGATTATATTGCCAGGCCAAAAGGGAATGGATACAAAAGTTTGCATATGGCAGTGGATGTAAGTGAAATTGGGAGGACTAGACCCTTGATGGAAATACAGATAAGAACTACTGAAATGGATAGGTTAGCTGTTGGTGGAATGGCATCTCATTCATTATACAAGGCTGGTCTTACTAATCCAGAGGAGGCAAAGCGTTTAAAGACCATCATGCTGGCTGCAGCTGAACTGGCTGCTTTGCGCCTTAAAGATTTTCCAAGTGCAAATCATAAAGGGATTGAATTTGATCAGAGAGATAGAGTATTTCGCCTTCTCGACAAGAACGGAGATGGGAAGATAAGCATTGAGGAACTTACAGAGGTGATAGAGGAGCTTGGTGCACCAGGAGAAGATGCACATGACATGATGCTGCTTCTTGACTCGAACAGTGATGGCTCCCTCAGCTCTGATGAATTTCAGATGTTCCAAAAACAGGTCGAGATGGTTCGTAATTTAGAGGACAGAGATGATGAATACAAGAAAATATTGGATGAGAAACTTCATATGGCAGATGATAGTGGTTTAATTCAGGTATATAATAAGGAGTTTGGCAACAGGCTTGTGAGCTAG

Protein sequence

>Msa1219530

MELLHFHASDYPTRHHSLLKQTTTTHHRLLSLFFPTRPTRVTGLRWSTPRACAVEVPGGGKMVIELVGAFNDLTERMKVLSTSSSGLLFKSLKLSIPVLQSSPLTPDGRSPLSKALSIAMLLADLQMDAEVISAGILREVLEVGELNLHEVRSQIGSATAHLVHESLRVKNFASRVDILDEENAAALRKFCLTYYDIRALILDLALKLDMMRHLGHLPRYQQQIISLQVMKIYAPLAHAVGINYISLELEDLSFQYLFPYSYLYVDTWLRSQETGGISLIDVYKDELLQSLKSDPILAELVDDISVKGRYKSRYSTMKKLLKDGRRPEDVNDVLGLRVVLNPKSGDNALEAGERACYRAHQIIQSMWKEIPSRTKDYIARPKGNGYKSLHMAVDVSEIGRTRPLMEIQIRTTEMDRLAVGGMASHSLYKAGLTNPEEAKRLKTIMLAAAELAALRLKDFPSANHKGIEFDQRDRVFRLLDKNGDGKISIEELTEVIEELGAPGEDAHDMMLLLDSNSDGSLSSDEFQMFQKQVEMVRNLEDRDDEYKKILDEKLHMADDSGLIQVYNKEFGNRLVS*