AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1011140


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1011140 MtrunA17_Chr4g0069291 96.034 580 19 2 1 576 1 580 0.0 1135
Msa1011140 MtrunA17_Chr7g0269591 29.477 363 219 8 116 452 175 526 1.60e-39 154
Msa1011140 MtrunA17_Chr8g0344131 29.261 352 212 7 108 452 242 563 9.34e-34 136
Msa1011140 MtrunA17_Chr5g0395711 36.719 128 74 3 303 429 443 564 1.67e-14 77.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1011140 AT3G17470.2 69.084 524 155 3 58 574 72 595 0.0 713
Msa1011140 AT3G17470.1 69.084 524 155 3 58 574 57 580 0.0 712
Msa1011140 AT3G17470.3 68.407 383 119 1 58 438 57 439 0.0 543
Msa1011140 AT1G54130.1 32.530 332 191 7 108 431 234 540 3.62e-38 150
Msa1011140 AT3G14050.1 32.530 332 190 9 109 431 230 536 6.98e-37 146
Msa1011140 AT4G02260.3 29.664 327 200 7 116 423 177 492 2.34e-36 145
Msa1011140 AT4G02260.2 29.483 329 202 7 116 425 177 494 3.48e-36 145
Msa1011140 AT4G02260.4 29.483 329 202 7 116 425 177 494 3.50e-36 145
Msa1011140 AT4G02260.1 29.394 330 202 8 116 425 177 495 1.33e-34 140

Find 165 sgRNAs with CRISPR-Local

Find 232 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCACTTGGAAAATCTTTA+AGG 0.162251 7_1:+15070115 None:intergenic
TGACATTAGAGCTTTGATTT+TGG 0.217842 7_1:-15071064 Msa1011140:CDS
ATCCACTAATTCCGCAAATA+TGG 0.219185 7_1:+15070765 None:intergenic
GCCTTCCACGAATATCTTAT+AGG 0.237824 7_1:-15069454 Msa1011140:three_prime_UTR
GACCCTCAACCTATCCTTAA+AGG 0.245282 7_1:-15069406 Msa1011140:three_prime_UTR
AGCACATCATTTACATCTTC+TGG 0.271709 7_1:+15070670 None:intergenic
CATGCTGGCTGCAGCTGAAC+TGG 0.295606 7_1:-15070148 Msa1011140:CDS
CATGCTTCTCGCTGATCTTC+AGG 0.298040 7_1:-15072293 Msa1011140:intron
GCAGTGGATGTAAGTGAAAT+TGG 0.300443 7_1:-15070475 Msa1011140:CDS
TAACTACATATCACTTGAAT+TGG 0.301558 7_1:-15070923 Msa1011140:CDS
CAGGTATATAATAAGGAGTT+TGG 0.304931 7_1:-15069563 Msa1011140:CDS
TTCCTCTTTACAAACGGTTC+TGG 0.309806 7_1:+15069363 None:intergenic
TTTCCAAGTGCAAATCATAA+AGG 0.319956 7_1:-15070105 Msa1011140:CDS
GAAGTTTCATCCACAAATAT+TGG 0.331515 7_1:-15072744 Msa1011140:five_prime_UTR
TTTAATTCAGGTATATAATA+AGG 0.339845 7_1:-15069570 Msa1011140:CDS
AGAGGAGAGCTTTGAAGAAC+AGG 0.345980 7_1:+15072361 None:intergenic
GTGGATGATATCTCAGTTAA+AGG 0.351684 7_1:-15070748 Msa1011140:CDS
TGCATCTAGAGTAGACATTC+TGG 0.356083 7_1:-15071133 Msa1011140:CDS
TCCACATAAAGATATGAATA+AGG 0.356386 7_1:+15070874 None:intergenic
GTTTCTTATTCAACTTTCAT+TGG 0.365023 7_1:+15072781 None:intergenic
GGCAAATCTTATACAACAAT+TGG 0.368357 7_1:+15069474 None:intergenic
GGATTTCTTTCCACATAGAT+TGG 0.373050 7_1:+15070560 None:intergenic
AATGCATTATCTCCAGACTT+AGG 0.376086 7_1:+15070625 None:intergenic
AGGTTCTGCTACTGCTCATT+TGG 0.380091 7_1:-15071184 Msa1011140:CDS
CTGGAGAGAGAGCGTGCTAC+AGG 0.382710 7_1:-15070597 Msa1011140:CDS
TTCCAAGTGCAAATCATAAA+GGG 0.388198 7_1:-15070104 Msa1011140:CDS
TGGGAGGACTAGACCCTTGA+TGG 0.390942 7_1:-15070455 Msa1011140:CDS
GATTATATTGCCAGGCCAAA+AGG 0.405490 7_1:-15070523 Msa1011140:CDS
ACAGATAAGAACTACTGAAA+TGG 0.407491 7_1:-15070428 Msa1011140:CDS
TGATGAATACAAGAAAATAT+TGG 0.408026 7_1:-15069624 Msa1011140:CDS
TAAGCGGTGGTGAGTGGTAG+TGG 0.408658 7_1:+15072585 None:intergenic
AGATGATAGTGGTTTAATTC+AGG 0.409345 7_1:-15069582 Msa1011140:CDS
TCCCATATTTGCGGAATTAG+TGG 0.410252 7_1:-15070767 Msa1011140:CDS
CATATCTTTATGTGGATACA+TGG 0.412806 7_1:-15070867 Msa1011140:CDS
CGAGATGGTTCGTAATTTAG+AGG 0.415458 7_1:-15069654 Msa1011140:CDS
AGCCAGAACCGTTTGTAAAG+AGG 0.417258 7_1:-15069365 Msa1011140:three_prime_UTR
TTGAGAGAGGTGTTGGAAGT+AGG 0.431304 7_1:-15071240 Msa1011140:CDS
GAAAGAGGAGAGCGACCATC+AGG 0.433390 7_1:+15072334 None:intergenic
CACAATGAAGAAGCTCTTGA+AGG 0.442293 7_1:-15070704 Msa1011140:CDS
ATGCATTATCTCCAGACTTA+GGG 0.442953 7_1:+15070626 None:intergenic
ATGGTGGCGCGTGGGGTAAT+CGG 0.443215 7_1:+15072624 None:intergenic
ATGATCTGCTGCTGATACCT+TGG 0.450610 7_1:+15070997 None:intergenic
CATGGCAATGGATAAAGCTT+TGG 0.451814 7_1:+15072312 None:intergenic
AAACACAACACCAATATTTG+TGG 0.453363 7_1:+15072734 None:intergenic
AAGAAAACACTAACCTCCTC+TGG 0.456445 7_1:+15070346 None:intergenic
TCCTTATTCATATCTTTATG+TGG 0.459286 7_1:-15070875 Msa1011140:CDS
ATGTCATGTGCATCTTCTCC+TGG 0.459375 7_1:+15069976 None:intergenic
AAAATATTCCTCTTTACAAA+CGG 0.460364 7_1:+15069357 None:intergenic
CTTGACATGATGAGGCATCT+TGG 0.461356 7_1:-15071027 Msa1011140:CDS
GCGTGTGCTGTAGAAGTTCC+CGG 0.463247 7_1:-15072499 Msa1011140:CDS
TCTTATCTGTATTTCCATCA+AGG 0.463566 7_1:+15070441 None:intergenic
TTCTCGACAAGAACGGAGAT+GGG 0.464209 7_1:-15070047 Msa1011140:CDS
CATGAAGTTCGAAGTCAGAT+AGG 0.464988 7_1:-15071204 Msa1011140:CDS
TGGATACAAAAGTTTGCATA+TGG 0.465288 7_1:-15070497 Msa1011140:CDS
GAGCGACCATCAGGAGTAAG+AGG 0.466122 7_1:+15072343 None:intergenic
TCCACTAATTCCGCAAATAT+GGG 0.466142 7_1:+15070766 None:intergenic
GGAACTTACAGAGGTGATAG+AGG 0.467883 7_1:-15070010 Msa1011140:CDS
CTTCATATGGCAGATGATAG+TGG 0.471188 7_1:-15069593 Msa1011140:CDS
ATTATATTGCCAGGCCAAAA+GGG 0.474542 7_1:-15070522 Msa1011140:CDS
GTGACGCGGGTGGGTCGAGT+GGG 0.475192 7_1:+15072547 None:intergenic
TGCTCCTCTTGCTCATGCTG+TGG 0.479821 7_1:-15070950 Msa1011140:CDS
ATAATAAGGAGTTTGGCAAC+AGG 0.480517 7_1:-15069556 Msa1011140:CDS
AAAATCTGATCCCATATTTG+CGG 0.484313 7_1:-15070776 Msa1011140:CDS
GTGTTATCCACAAGTTCCTC+TGG 0.484331 7_1:-15072415 Msa1011140:CDS
ACCCTCAACCTATCCTTAAA+GGG 0.486549 7_1:-15069405 Msa1011140:three_prime_UTR
AGCTCTCCTCTTACTCCTGA+TGG 0.487226 7_1:-15072349 Msa1011140:CDS
GGAGATAATGCATTGGAAGC+TGG 0.491096 7_1:-15070616 Msa1011140:CDS
ACGGTGAGTTTAGGAGAGTA+TGG 0.491382 7_1:-15072834 None:intergenic
CTTCTCGACAAGAACGGAGA+TGG 0.492481 7_1:-15070048 Msa1011140:CDS
GGTGACGCGGGTGGGTCGAG+TGG 0.492820 7_1:+15072546 None:intergenic
TCCCTTTAAGGATAGGTTGA+GGG 0.493236 7_1:+15069404 None:intergenic
ATTGGATGAGAAACTTCATA+TGG 0.494227 7_1:-15069606 Msa1011140:CDS
GTGGTGTTGAACCCTAAGTC+TGG 0.496487 7_1:-15070637 Msa1011140:CDS
TGTGGAAAGAAATCCCTTCT+CGG 0.498703 7_1:-15070552 Msa1011140:CDS
TCTCCTCTCTCTTCTTCTAG+TGG 0.501351 7_1:+15072805 None:intergenic
CAGTGGATGTAAGTGAAATT+GGG 0.501702 7_1:-15070474 Msa1011140:CDS
TGGTTTGTTTGAGAAGAGAA+TGG 0.502046 7_1:+15072605 None:intergenic
CTCCCTTTAAGGATAGGTTG+AGG 0.507292 7_1:+15069403 None:intergenic
GATGCAGAAGTTATATCTGC+TGG 0.508548 7_1:-15071267 Msa1011140:CDS
TATCACCATCTTTCCTCCAC+CGG 0.511134 7_1:+15072480 None:intergenic
ACTCGACCCACCCGCGTCAC+CGG 0.513152 7_1:-15072544 Msa1011140:CDS
TGAGAGTAAGCGGTGGTGAG+TGG 0.513797 7_1:+15072579 None:intergenic
GGATACATGGTTGAGAAGTC+AGG 0.514914 7_1:-15070854 Msa1011140:CDS
TGAATGGAATGTAATGTTGT+TGG 0.518136 7_1:+15072700 None:intergenic
ATAGAGGAGCTTGGTGCACC+AGG 0.521684 7_1:-15069994 Msa1011140:CDS
ACGCTCTCGGAGTGGACCAC+CGG 0.522401 7_1:+15072518 None:intergenic
CTTATCTGTATTTCCATCAA+GGG 0.524648 7_1:+15070442 None:intergenic
CCGGAGACCGGTGACGCGGG+TGG 0.524804 7_1:+15072537 None:intergenic
ATCCCTTTATGATTTGCACT+TGG 0.525949 7_1:+15070102 None:intergenic
GCTCCTCTTGCTCATGCTGT+GGG 0.528069 7_1:-15070949 Msa1011140:CDS
CAAAAGTTTGCATATGGCAG+TGG 0.532210 7_1:-15070491 Msa1011140:CDS
CCACCCGCGTCACCGGTCTC+CGG 0.535267 7_1:-15072537 Msa1011140:CDS
AGTTCCCGGTGGAGGAAAGA+TGG 0.535806 7_1:-15072485 Msa1011140:CDS
ATTGCCAGGCCAAAAGGGAA+TGG 0.535893 7_1:-15070517 Msa1011140:CDS
ATGGATAGGTTAGCTGTTGG+TGG 0.537695 7_1:-15070409 Msa1011140:CDS
TCTCATTCATTATACAAGGC+TGG 0.539860 7_1:-15070379 Msa1011140:CDS
AAGAAGACCAGAGGAACTTG+TGG 0.542935 7_1:+15072408 None:intergenic
TCTCTCTTCTTCTAGTGGAG+TGG 0.543876 7_1:+15072810 None:intergenic
CTTCTTGACTCGAACAGTGA+TGG 0.544084 7_1:-15069946 Msa1011140:CDS
TTTCGCCTTCTCGACAAGAA+CGG 0.544865 7_1:-15070054 Msa1011140:CDS
CATCTCCGTTCTTGTCGAGA+AGG 0.545112 7_1:+15070049 None:intergenic
GGCATCTTGGTCACCTTCCA+AGG 0.547221 7_1:-15071014 Msa1011140:CDS
ATGGATAAAGCTTTGGAAAG+AGG 0.547465 7_1:+15072319 None:intergenic
TAGGTTAGCTGTTGGTGGAA+TGG 0.547704 7_1:-15070404 Msa1011140:CDS
ACTTCTACAGCACACGCTCT+CGG 0.548640 7_1:+15072505 None:intergenic
CGGAGTGGACCACCGGAGAC+CGG 0.548762 7_1:+15072525 None:intergenic
GGACTAAAGATTATATTGCC+AGG 0.550792 7_1:-15070531 Msa1011140:CDS
CTGAAATTCATCAGAGCTGA+GGG 0.550894 7_1:+15069921 None:intergenic
GGAAGAAGAGTGAGAGTAAG+CGG 0.551427 7_1:+15072569 None:intergenic
GCTGTAGAAGTTCCCGGTGG+AGG 0.555769 7_1:-15072493 Msa1011140:CDS
GAAACTTCATCTTGTCGTTG+CGG 0.556978 7_1:+15072759 None:intergenic
GCGTAGTTGACATCTATGAA+TGG 0.557411 7_1:+15072684 None:intergenic
TGACGCGGGTGGGTCGAGTG+GGG 0.558230 7_1:+15072548 None:intergenic
ATCAGCGAGAAGCATGGCAA+TGG 0.559213 7_1:+15072300 None:intergenic
ATCAAATCATCCAATCTATG+TGG 0.562146 7_1:-15070570 Msa1011140:CDS
GAAGATGTAAATGATGTGCT+TGG 0.567130 7_1:-15070667 Msa1011140:CDS
CTTTGAAGCTTGACATGATG+AGG 0.569527 7_1:-15071035 Msa1011140:CDS
AGAGCTTTGAAGAACAGGAA+TGG 0.570567 7_1:+15072366 None:intergenic
TGGAATATTGAGAGAGGTGT+TGG 0.571119 7_1:-15071247 Msa1011140:CDS
AGTATCCTATAAGATATTCG+TGG 0.573789 7_1:+15069449 None:intergenic
TAAGAACTACTGAAATGGAT+AGG 0.574391 7_1:-15070423 Msa1011140:CDS
TATAATCTTTAGTCCGAGAA+GGG 0.574454 7_1:+15070539 None:intergenic
GGCATCTCATTCATTATACA+AGG 0.575422 7_1:-15070383 Msa1011140:CDS
GAGAAGAGAATGGTGGCGCG+TGG 0.575660 7_1:+15072615 None:intergenic
CTCACTTAGATAATCTATTG+TGG 0.576514 7_1:-15069428 Msa1011140:three_prime_UTR
TTCAGCTGCAGCCAGCATGA+TGG 0.579396 7_1:+15070152 None:intergenic
AGAAGAGAATGGTGGCGCGT+GGG 0.580259 7_1:+15072616 None:intergenic
ATCACCATCTTTCCTCCACC+GGG 0.581759 7_1:+15072481 None:intergenic
ACCACCGGAGACCGGTGACG+CGG 0.582141 7_1:+15072533 None:intergenic
ATGAAGAAGCTCTTGAAGGA+TGG 0.584555 7_1:-15070700 Msa1011140:CDS
ATATAATCTTTAGTCCGAGA+AGG 0.585270 7_1:+15070538 None:intergenic
AGAAGAGTGAGAGTAAGCGG+TGG 0.586254 7_1:+15072572 None:intergenic
TGGTTGAGAAGTCAGGAGAC+AGG 0.587107 7_1:-15070847 Msa1011140:CDS
ATTCCCACAGCATGAGCAAG+AGG 0.587161 7_1:+15070946 None:intergenic
CGGAGACCGGTGACGCGGGT+GGG 0.591943 7_1:+15072538 None:intergenic
TAAGTCTGGAGATAATGCAT+TGG 0.596696 7_1:-15070623 Msa1011140:CDS
GCGTTTAAAGACCATCATGC+TGG 0.599824 7_1:-15070163 Msa1011140:CDS
CCACCGGAGACCGGTGACGC+GGG 0.602844 7_1:+15072534 None:intergenic
AGAAGCTCTTGAAGGATGGT+CGG 0.606805 7_1:-15070696 Msa1011140:CDS
TGGAGAGAGAGCGTGCTACA+GGG 0.607107 7_1:-15070596 Msa1011140:CDS
TCCTATAAGATATTCGTGGA+AGG 0.611103 7_1:+15069453 None:intergenic
GAAGAGAATGGTGGCGCGTG+GGG 0.611821 7_1:+15072617 None:intergenic
TACAGCACACGCTCTCGGAG+TGG 0.612388 7_1:+15072510 None:intergenic
ACAGAGGTGATAGAGGAGCT+TGG 0.612835 7_1:-15070003 Msa1011140:CDS
CCCGCGTCACCGGTCTCCGG+TGG 0.617971 7_1:-15072534 Msa1011140:CDS
TCTGCTGCTGATACCTTGGA+AGG 0.625070 7_1:+15071001 None:intergenic
CTGAAGATCAGCGAGAAGCA+TGG 0.633168 7_1:+15072294 None:intergenic
TGATTTGACTGAGAGGATGA+AGG 0.637086 7_1:-15072437 Msa1011140:CDS
CTTTCAATGATTTGACTGAG+AGG 0.637305 7_1:-15072444 Msa1011140:CDS
TCTGAAATTCATCAGAGCTG+AGG 0.641418 7_1:+15069920 None:intergenic
AGATGGGAAGATAAGCATTG+AGG 0.649781 7_1:-15070031 Msa1011140:CDS
ATCTGCTGGAATATTGAGAG+AGG 0.655258 7_1:-15071253 Msa1011140:CDS
GGCTGGTCTTACTAATCCAG+AGG 0.657487 7_1:-15070362 Msa1011140:CDS
AAGATGGTGATAGAGCTTGT+CGG 0.658286 7_1:-15072469 Msa1011140:CDS
TGATGTGCTTGGACTGCGAG+TGG 0.660485 7_1:-15070656 Msa1011140:CDS
TGGTCTTACTAATCCAGAGG+AGG 0.668643 7_1:-15070359 Msa1011140:intron
GCGTGGGGTAATCGGAAGCG+TGG 0.673355 7_1:+15072632 None:intergenic
TGATTTGAAAAGAAGACCAG+AGG 0.678594 7_1:+15072399 None:intergenic
TGGATGTAAGTGAAATTGGG+AGG 0.681330 7_1:-15070471 Msa1011140:CDS
TTTGTTTGAGAAGAGAATGG+TGG 0.686445 7_1:+15072608 None:intergenic
AAGCATTGAGGAACTTACAG+AGG 0.688318 7_1:-15070019 Msa1011140:CDS
ACTCCACTAGAAGAAGAGAG+AGG 0.694188 7_1:-15072808 Msa1011140:five_prime_UTR
GAAATGGATAGGTTAGCTGT+TGG 0.706251 7_1:-15070412 Msa1011140:CDS
TTGAGAAGTCAGGAGACAGG+TGG 0.721078 7_1:-15070844 Msa1011140:CDS
TGTGCTGTAGAAGTTCCCGG+TGG 0.767826 7_1:-15072496 Msa1011140:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAGAAAATATTCCTTTTTT+AGG - chr7_1:15070076-15070095 Msa1011140:CDS 15.0%
!!! TCTATTTGTTTTATTAGTTA+AGG + chr7_1:15070390-15070409 None:intergenic 15.0%
!! ATAATGTTAGATAATAGATA+TGG - chr7_1:15070433-15070452 Msa1011140:CDS 15.0%
!!! GCAATTGATTTTAAATAATT+TGG + chr7_1:15070619-15070638 None:intergenic 15.0%
!! TACTATAAAGAAACAATAAA+CGG + chr7_1:15070834-15070853 None:intergenic 15.0%
!! TTTAATTCAGGTATATAATA+AGG - chr7_1:15072567-15072586 Msa1011140:CDS 15.0%
!! ATGAAAATGAATGAAAGTAA+TGG + chr7_1:15069876-15069895 None:intergenic 20.0%
!! AAGTCAATAAATAGTAATCA+TGG + chr7_1:15070020-15070039 None:intergenic 20.0%
!!! TATTTTCTTATATTTCAGAC+CGG + chr7_1:15070066-15070085 None:intergenic 20.0%
!!! TAAGAAAAGATTCCTTTTTT+AGG - chr7_1:15070114-15070133 Msa1011140:CDS 20.0%
!! TTATTCAATGAACCTAAAAA+AGG + chr7_1:15070129-15070148 None:intergenic 20.0%
!! TCAATCAATGAATCTAAAAA+AGG - chr7_1:15070192-15070211 Msa1011140:intron 20.0%
!!! TATTTTCTTATATTTGAGAC+CGG - chr7_1:15070217-15070236 Msa1011140:intron 20.0%
!! AATATTGTGGTATACATATA+AGG - chr7_1:15070244-15070263 Msa1011140:intron 20.0%
!!! ATAATTGATTTTGACATGTT+TGG - chr7_1:15070517-15070536 Msa1011140:CDS 20.0%
!!! TGTTTTATTTTTTGATACTC+AGG - chr7_1:15071947-15071966 Msa1011140:intron 20.0%
!! AGTTGTACATAATTTCTTAA+TGG - chr7_1:15072341-15072360 Msa1011140:CDS 20.0%
!! TGATGAATACAAGAAAATAT+TGG - chr7_1:15072513-15072532 Msa1011140:CDS 20.0%
!! AAAATATTCCTCTTTACAAA+CGG + chr7_1:15072783-15072802 None:intergenic 20.0%
! GTTTCTTATTCAACTTTCAT+TGG + chr7_1:15069359-15069378 None:intergenic 25.0%
! AACAAATAGATAAGCTTAGA+AGG - chr7_1:15070400-15070419 Msa1011140:CDS 25.0%
! CAAGTTAGAATCAATTATAG+AGG + chr7_1:15070568-15070587 None:intergenic 25.0%
!! AATTTCAGTAAGAGTTTGTT+TGG + chr7_1:15070776-15070795 None:intergenic 25.0%
! TAACTACATATCACTTGAAT+TGG - chr7_1:15071214-15071233 Msa1011140:CDS 25.0%
! TCCTTATTCATATCTTTATG+TGG - chr7_1:15071262-15071281 Msa1011140:CDS 25.0%
! TCCACATAAAGATATGAATA+AGG + chr7_1:15071266-15071285 None:intergenic 25.0%
!!! CACGTCTTTTTAAGAAATTA+TGG - chr7_1:15072318-15072337 Msa1011140:CDS 25.0%
GAAGTTTCATCCACAAATAT+TGG - chr7_1:15069393-15069412 Msa1011140:three_prime_UTR 30.0%
AAACACAACACCAATATTTG+TGG + chr7_1:15069406-15069425 None:intergenic 30.0%
TGAATGGAATGTAATGTTGT+TGG + chr7_1:15069440-15069459 None:intergenic 30.0%
! AAGTGTAAGAGTTCCATTTT+TGG + chr7_1:15069485-15069504 None:intergenic 30.0%
CAAAGTCTCACACATATAAT+TGG + chr7_1:15069966-15069985 None:intergenic 30.0%
CAATTATATGTGTGAGACTT+TGG - chr7_1:15069964-15069983 Msa1011140:CDS 30.0%
TTGAGACTTGAACCTAAAAA+AGG + chr7_1:15070091-15070110 None:intergenic 30.0%
GATTGAGTAGTTAATGTATG+TGG + chr7_1:15070178-15070197 None:intergenic 30.0%
!! AATTTGACATTTTGAGAGCA+AGG - chr7_1:15070285-15070304 Msa1011140:intron 30.0%
!! AGTGTTGTTTAGTCTCAATT+TGG - chr7_1:15070313-15070332 Msa1011140:intron 30.0%
ATAATTTGGTTATGTGTCTC+TGG + chr7_1:15070605-15070624 None:intergenic 30.0%
TTGCAGTTAACAAAACACAT+AGG - chr7_1:15070635-15070654 Msa1011140:CDS 30.0%
AACAGCTACTATACTCTTAA+TGG + chr7_1:15070674-15070693 None:intergenic 30.0%
CAATGAAATTATGACACTCA+AGG + chr7_1:15070811-15070830 None:intergenic 30.0%
ATAGTAAATGTGATTGCAGA+TGG - chr7_1:15070848-15070867 Msa1011140:CDS 30.0%
!! TGACATTAGAGCTTTGATTT+TGG - chr7_1:15071073-15071092 Msa1011140:CDS 30.0%
CATATCTTTATGTGGATACA+TGG - chr7_1:15071270-15071289 Msa1011140:CDS 30.0%
AAAATCTGATCCCATATTTG+CGG - chr7_1:15071361-15071380 Msa1011140:intron 30.0%
ATCAAATCATCCAATCTATG+TGG - chr7_1:15071567-15071586 Msa1011140:intron 30.0%
TATAATCTTTAGTCCGAGAA+GGG + chr7_1:15071601-15071620 None:intergenic 30.0%
ATATAATCTTTAGTCCGAGA+AGG + chr7_1:15071602-15071621 None:intergenic 30.0%
TGGATACAAAAGTTTGCATA+TGG - chr7_1:15071640-15071659 Msa1011140:intron 30.0%
CTTATCTGTATTTCCATCAA+GGG + chr7_1:15071698-15071717 None:intergenic 30.0%
TCTTATCTGTATTTCCATCA+AGG + chr7_1:15071699-15071718 None:intergenic 30.0%
ACAGATAAGAACTACTGAAA+TGG - chr7_1:15071709-15071728 Msa1011140:intron 30.0%
TAAGAACTACTGAAATGGAT+AGG - chr7_1:15071714-15071733 Msa1011140:intron 30.0%
CTTGCAAAGATGAATGAATA+CGG + chr7_1:15071826-15071845 None:intergenic 30.0%
! TTTTTCATGTCTAAGGAGTT+AGG + chr7_1:15071908-15071927 None:intergenic 30.0%
!! TTCCTTCTTTTTCATGTCTA+AGG + chr7_1:15071915-15071934 None:intergenic 30.0%
GACATGAAAAAGAAGGAAAT+TGG - chr7_1:15071917-15071936 Msa1011140:intron 30.0%
TTGCACTTGGAAAATCTTTA+AGG + chr7_1:15072025-15072044 None:intergenic 30.0%
TTTCCAAGTGCAAATCATAA+AGG - chr7_1:15072032-15072051 Msa1011140:intron 30.0%
TTCCAAGTGCAAATCATAAA+GGG - chr7_1:15072033-15072052 Msa1011140:intron 30.0%
ATTTCAGATGTTCCAAAAAC+AGG - chr7_1:15072232-15072251 Msa1011140:intron 30.0%
TAGCTCAAGTATATATGCTT+TGG + chr7_1:15072383-15072402 None:intergenic 30.0%
TTACATACAATTCATGAGAC+AGG + chr7_1:15072437-15072456 None:intergenic 30.0%
TGAATTGTATGTAACTCTAG+TGG - chr7_1:15072443-15072462 Msa1011140:CDS 30.0%
TATGTAACTCTAGTGGTATT+TGG - chr7_1:15072450-15072469 Msa1011140:CDS 30.0%
ATTGGATGAGAAACTTCATA+TGG - chr7_1:15072531-15072550 Msa1011140:CDS 30.0%
!! AGATGATAGTGGTTTAATTC+AGG - chr7_1:15072555-15072574 Msa1011140:CDS 30.0%
CAGGTATATAATAAGGAGTT+TGG - chr7_1:15072574-15072593 Msa1011140:CDS 30.0%
GGCAAATCTTATACAACAAT+TGG + chr7_1:15072666-15072685 None:intergenic 30.0%
AGTATCCTATAAGATATTCG+TGG + chr7_1:15072691-15072710 None:intergenic 30.0%
CTCACTTAGATAATCTATTG+TGG - chr7_1:15072709-15072728 Msa1011140:five_prime_UTR 30.0%
ACTACGCATTGAACCAAAAA+TGG - chr7_1:15069469-15069488 Msa1011140:three_prime_UTR 35.0%
TTTGTTTGAGAAGAGAATGG+TGG + chr7_1:15069532-15069551 None:intergenic 35.0%
!! TGGTTTGTTTGAGAAGAGAA+TGG + chr7_1:15069535-15069554 None:intergenic 35.0%
CTTTCAATGATTTGACTGAG+AGG - chr7_1:15069693-15069712 Msa1011140:intron 35.0%
TGATTTGAAAAGAAGACCAG+AGG + chr7_1:15069741-15069760 None:intergenic 35.0%
!! ATGGATAAAGCTTTGGAAAG+AGG + chr7_1:15069821-15069840 None:intergenic 35.0%
TTCTTATATTTCAGACCGGA+GGG + chr7_1:15070062-15070081 None:intergenic 35.0%
TTTCTTATATTTCAGACCGG+AGG + chr7_1:15070063-15070082 None:intergenic 35.0%
! TTTCTTATATTTGAGACCGG+AGG - chr7_1:15070220-15070239 Msa1011140:intron 35.0%
! TTCTTATATTTGAGACCGGA+GGG - chr7_1:15070221-15070240 Msa1011140:intron 35.0%
!! TAAGCTTAGAAGGTTGATGA+TGG - chr7_1:15070410-15070429 Msa1011140:CDS 35.0%
TTTCACCAAACACACATGTA+AGG + chr7_1:15070484-15070503 None:intergenic 35.0%
!! TGTGTGTTTGGTGAAACTTT+TGG - chr7_1:15070488-15070507 Msa1011140:CDS 35.0%
!! TAGAGCTTTGATTTTGGACT+TGG - chr7_1:15071079-15071098 Msa1011140:CDS 35.0%
TCCACTAATTCCGCAAATAT+GGG + chr7_1:15071374-15071393 None:intergenic 35.0%
ATCCACTAATTCCGCAAATA+TGG + chr7_1:15071375-15071394 None:intergenic 35.0%
GTGGATGATATCTCAGTTAA+AGG - chr7_1:15071389-15071408 Msa1011140:intron 35.0%
AGCACATCATTTACATCTTC+TGG + chr7_1:15071470-15071489 None:intergenic 35.0%
GAAGATGTAAATGATGTGCT+TGG - chr7_1:15071470-15071489 Msa1011140:intron 35.0%
ATGCATTATCTCCAGACTTA+GGG + chr7_1:15071514-15071533 None:intergenic 35.0%
AATGCATTATCTCCAGACTT+AGG + chr7_1:15071515-15071534 None:intergenic 35.0%
TAAGTCTGGAGATAATGCAT+TGG - chr7_1:15071514-15071533 Msa1011140:intron 35.0%
GGATTTCTTTCCACATAGAT+TGG + chr7_1:15071580-15071599 None:intergenic 35.0%
GGACTAAAGATTATATTGCC+AGG - chr7_1:15071606-15071625 Msa1011140:intron 35.0%
ATTATATTGCCAGGCCAAAA+GGG - chr7_1:15071615-15071634 Msa1011140:intron 35.0%
! CTTTTGTATCCATTCCCTTT+TGG + chr7_1:15071632-15071651 None:intergenic 35.0%
CAGTGGATGTAAGTGAAATT+GGG - chr7_1:15071663-15071682 Msa1011140:intron 35.0%
GGCATCTCATTCATTATACA+AGG - chr7_1:15071754-15071773 Msa1011140:intron 35.0%
TCTCATTCATTATACAAGGC+TGG - chr7_1:15071758-15071777 Msa1011140:intron 35.0%
CTCCTTAGACATGAAAAAGA+AGG - chr7_1:15071910-15071929 Msa1011140:intron 35.0%
! ATCCCTTTATGATTTGCACT+TGG + chr7_1:15072038-15072057 None:intergenic 35.0%
! GACATCAAATCACCTGTTTT+TGG + chr7_1:15072247-15072266 None:intergenic 35.0%
AGGTGATTTGATGTCTTATC+AGG - chr7_1:15072252-15072271 Msa1011140:intron 35.0%
! TGCTTTGGTAATCAGATAGT+TGG + chr7_1:15072368-15072387 None:intergenic 35.0%
!!! CTAGTGGTATTTGGTTTTGT+AGG - chr7_1:15072459-15072478 Msa1011140:CDS 35.0%
ATAATAAGGAGTTTGGCAAC+AGG - chr7_1:15072581-15072600 Msa1011140:CDS 35.0%
TCCTATAAGATATTCGTGGA+AGG + chr7_1:15072687-15072706 None:intergenic 35.0%
!! TTTTCACTCCCTTTAAGGAT+AGG + chr7_1:15072743-15072762 None:intergenic 35.0%
! GACTATTTTCACTCCCTTTA+AGG + chr7_1:15072748-15072767 None:intergenic 35.0%
GAAACTTCATCTTGTCGTTG+CGG + chr7_1:15069381-15069400 None:intergenic 40.0%
GCGTAGTTGACATCTATGAA+TGG + chr7_1:15069456-15069475 None:intergenic 40.0%
AAGATGGTGATAGAGCTTGT+CGG - chr7_1:15069668-15069687 Msa1011140:intron 40.0%
TGATTTGACTGAGAGGATGA+AGG - chr7_1:15069700-15069719 Msa1011140:intron 40.0%
!! AGAGCTTTGAAGAACAGGAA+TGG + chr7_1:15069774-15069793 None:intergenic 40.0%
CATGGCAATGGATAAAGCTT+TGG + chr7_1:15069828-15069847 None:intergenic 40.0%
GTATACCACAATATTCCCTC+CGG + chr7_1:15070239-15070258 None:intergenic 40.0%
!! TGACATTTTGAGAGCAAGGA+AGG - chr7_1:15070289-15070308 Msa1011140:intron 40.0%
GTTGACCTTACATGTGTGTT+TGG - chr7_1:15070476-15070495 Msa1011140:CDS 40.0%
!! GTGTTTGGTGAAACTTTTGG+AGG - chr7_1:15070491-15070510 Msa1011140:CDS 40.0%
GATGCAGAAGTTATATCTGC+TGG - chr7_1:15070870-15070889 Msa1011140:CDS 40.0%
ATCTGCTGGAATATTGAGAG+AGG - chr7_1:15070884-15070903 Msa1011140:CDS 40.0%
! TGGAATATTGAGAGAGGTGT+TGG - chr7_1:15070890-15070909 Msa1011140:CDS 40.0%
CATGAAGTTCGAAGTCAGAT+AGG - chr7_1:15070933-15070952 Msa1011140:CDS 40.0%
! TGCATCTAGAGTAGACATTC+TGG - chr7_1:15071004-15071023 Msa1011140:CDS 40.0%
!! CTTTGAAGCTTGACATGATG+AGG - chr7_1:15071102-15071121 Msa1011140:CDS 40.0%
TCCCATATTTGCGGAATTAG+TGG - chr7_1:15071370-15071389 Msa1011140:intron 40.0%
CACAATGAAGAAGCTCTTGA+AGG - chr7_1:15071433-15071452 Msa1011140:intron 40.0%
ATGAAGAAGCTCTTGAAGGA+TGG - chr7_1:15071437-15071456 Msa1011140:intron 40.0%
TGTGGAAAGAAATCCCTTCT+CGG - chr7_1:15071585-15071604 Msa1011140:intron 40.0%
GATTATATTGCCAGGCCAAA+AGG - chr7_1:15071614-15071633 Msa1011140:intron 40.0%
CAAAAGTTTGCATATGGCAG+TGG - chr7_1:15071646-15071665 Msa1011140:intron 40.0%
GCAGTGGATGTAAGTGAAAT+TGG - chr7_1:15071662-15071681 Msa1011140:intron 40.0%
TGGATGTAAGTGAAATTGGG+AGG - chr7_1:15071666-15071685 Msa1011140:intron 40.0%
! GAAATGGATAGGTTAGCTGT+TGG - chr7_1:15071725-15071744 Msa1011140:intron 40.0%
AAGAAAACACTAACCTCCTC+TGG + chr7_1:15071794-15071813 None:intergenic 40.0%
TCTAAGGAGTTAGGTCTAGA+TGG + chr7_1:15071899-15071918 None:intergenic 40.0%
! AGATGGGAAGATAAGCATTG+AGG - chr7_1:15072106-15072125 Msa1011140:intron 40.0%
!! AAGCATTGAGGAACTTACAG+AGG - chr7_1:15072118-15072137 Msa1011140:intron 40.0%
CTGAAATTCATCAGAGCTGA+GGG + chr7_1:15072219-15072238 None:intergenic 40.0%
! TCTGAAATTCATCAGAGCTG+AGG + chr7_1:15072220-15072239 None:intergenic 40.0%
!!! TTTGGTTTTGTAGGTCGAGA+TGG - chr7_1:15072468-15072487 Msa1011140:CDS 40.0%
CGAGATGGTTCGTAATTTAG+AGG - chr7_1:15072483-15072502 Msa1011140:CDS 40.0%
CTTCATATGGCAGATGATAG+TGG - chr7_1:15072544-15072563 Msa1011140:CDS 40.0%
GCCTTCCACGAATATCTTAT+AGG - chr7_1:15072683-15072702 Msa1011140:five_prime_UTR 40.0%
ACCCTCAACCTATCCTTAAA+GGG - chr7_1:15072732-15072751 Msa1011140:five_prime_UTR 40.0%
! TCCCTTTAAGGATAGGTTGA+GGG + chr7_1:15072736-15072755 None:intergenic 40.0%
TTCCTCTTTACAAACGGTTC+TGG + chr7_1:15072777-15072796 None:intergenic 40.0%
TCTCTCTTCTTCTAGTGGAG+TGG + chr7_1:15069330-15069349 None:intergenic 45.0%
ACTCCACTAGAAGAAGAGAG+AGG - chr7_1:15069329-15069348 Msa1011140:three_prime_UTR 45.0%
TCTCCTCTCTCTTCTTCTAG+TGG + chr7_1:15069335-15069354 None:intergenic 45.0%
GGAAGAAGAGTGAGAGTAAG+CGG + chr7_1:15069571-15069590 None:intergenic 45.0%
TATCACCATCTTTCCTCCAC+CGG + chr7_1:15069660-15069679 None:intergenic 45.0%
GTGTTATCCACAAGTTCCTC+TGG - chr7_1:15069722-15069741 Msa1011140:intron 45.0%
AAGAAGACCAGAGGAACTTG+TGG + chr7_1:15069732-15069751 None:intergenic 45.0%
!! AGAGGAGAGCTTTGAAGAAC+AGG + chr7_1:15069779-15069798 None:intergenic 45.0%
TCTTAAACTTCTCCTCCCTC+CGG - chr7_1:15070044-15070063 Msa1011140:CDS 45.0%
TTATATTTCAGACCGGAGGG+AGG + chr7_1:15070059-15070078 None:intergenic 45.0%
!! TTGAGAGAGGTGTTGGAAGT+AGG - chr7_1:15070897-15070916 Msa1011140:CDS 45.0%
AGGTTCTGCTACTGCTCATT+TGG - chr7_1:15070953-15070972 Msa1011140:CDS 45.0%
! CTTGACATGATGAGGCATCT+TGG - chr7_1:15071110-15071129 Msa1011140:CDS 45.0%
ATGATCTGCTGCTGATACCT+TGG + chr7_1:15071143-15071162 None:intergenic 45.0%
GGATACATGGTTGAGAAGTC+AGG - chr7_1:15071283-15071302 Msa1011140:intron 45.0%
AGAAGCTCTTGAAGGATGGT+CGG - chr7_1:15071441-15071460 Msa1011140:intron 45.0%
GGAGATAATGCATTGGAAGC+TGG - chr7_1:15071521-15071540 Msa1011140:intron 45.0%
! ATGGATAGGTTAGCTGTTGG+TGG - chr7_1:15071728-15071747 Msa1011140:intron 45.0%
! TAGGTTAGCTGTTGGTGGAA+TGG - chr7_1:15071733-15071752 Msa1011140:intron 45.0%
! TGGTCTTACTAATCCAGAGG+AGG - chr7_1:15071778-15071797 Msa1011140:intron 45.0%
GCGTTTAAAGACCATCATGC+TGG - chr7_1:15071974-15071993 Msa1011140:intron 45.0%
TTTCGCCTTCTCGACAAGAA+CGG - chr7_1:15072083-15072102 Msa1011140:intron 45.0%
TTCTCGACAAGAACGGAGAT+GGG - chr7_1:15072090-15072109 Msa1011140:intron 45.0%
GGAACTTACAGAGGTGATAG+AGG - chr7_1:15072127-15072146 Msa1011140:intron 45.0%
ATGTCATGTGCATCTTCTCC+TGG + chr7_1:15072164-15072183 None:intergenic 45.0%
! CTTCTTGACTCGAACAGTGA+TGG - chr7_1:15072191-15072210 Msa1011140:intron 45.0%
GACCCTCAACCTATCCTTAA+AGG - chr7_1:15072731-15072750 Msa1011140:five_prime_UTR 45.0%
! CTCCCTTTAAGGATAGGTTG+AGG + chr7_1:15072737-15072756 None:intergenic 45.0%
AGCCAGAACCGTTTGTAAAG+AGG - chr7_1:15072772-15072791 Msa1011140:five_prime_UTR 45.0%
AGAAGAGTGAGAGTAAGCGG+TGG + chr7_1:15069568-15069587 None:intergenic 50.0%
ACTTCTACAGCACACGCTCT+CGG + chr7_1:15069635-15069654 None:intergenic 50.0%
ATCACCATCTTTCCTCCACC+GGG + chr7_1:15069659-15069678 None:intergenic 50.0%
AGCTCTCCTCTTACTCCTGA+TGG - chr7_1:15069788-15069807 Msa1011140:intron 50.0%
! ATCAGCGAGAAGCATGGCAA+TGG + chr7_1:15069840-15069859 None:intergenic 50.0%
CTGAAGATCAGCGAGAAGCA+TGG + chr7_1:15069846-15069865 None:intergenic 50.0%
CATGCTTCTCGCTGATCTTC+AGG - chr7_1:15069844-15069863 Msa1011140:intron 50.0%
TGAGACCGGAGGGAATATTG+TGG - chr7_1:15070231-15070250 Msa1011140:intron 50.0%
TCTGCTGCTGATACCTTGGA+AGG + chr7_1:15071139-15071158 None:intergenic 50.0%
ATTCCCACAGCATGAGCAAG+AGG + chr7_1:15071194-15071213 None:intergenic 50.0%
TGGTTGAGAAGTCAGGAGAC+AGG - chr7_1:15071290-15071309 Msa1011140:intron 50.0%
TTGAGAAGTCAGGAGACAGG+TGG - chr7_1:15071293-15071312 Msa1011140:intron 50.0%
! GTGGTGTTGAACCCTAAGTC+TGG - chr7_1:15071500-15071519 Msa1011140:intron 50.0%
ATTGCCAGGCCAAAAGGGAA+TGG - chr7_1:15071620-15071639 Msa1011140:intron 50.0%
! GTATCCATTCCCTTTTGGCC+TGG + chr7_1:15071627-15071646 None:intergenic 50.0%
!! GGCTGGTCTTACTAATCCAG+AGG - chr7_1:15071775-15071794 Msa1011140:intron 50.0%
CATCTCCGTTCTTGTCGAGA+AGG + chr7_1:15072091-15072110 None:intergenic 50.0%
CTTCTCGACAAGAACGGAGA+TGG - chr7_1:15072089-15072108 Msa1011140:intron 50.0%
ACAGAGGTGATAGAGGAGCT+TGG - chr7_1:15072134-15072153 Msa1011140:intron 50.0%
! AGAAGAGAATGGTGGCGCGT+GGG + chr7_1:15069524-15069543 None:intergenic 55.0%
TAAGCGGTGGTGAGTGGTAG+TGG + chr7_1:15069555-15069574 None:intergenic 55.0%
TGAGAGTAAGCGGTGGTGAG+TGG + chr7_1:15069561-15069580 None:intergenic 55.0%
GCGTGTGCTGTAGAAGTTCC+CGG - chr7_1:15069638-15069657 Msa1011140:CDS 55.0%
TGTGCTGTAGAAGTTCCCGG+TGG - chr7_1:15069641-15069660 Msa1011140:CDS 55.0%
AGTTCCCGGTGGAGGAAAGA+TGG - chr7_1:15069652-15069671 Msa1011140:CDS 55.0%
GAGCGACCATCAGGAGTAAG+AGG + chr7_1:15069797-15069816 None:intergenic 55.0%
GAAAGAGGAGAGCGACCATC+AGG + chr7_1:15069806-15069825 None:intergenic 55.0%
GGCATCTTGGTCACCTTCCA+AGG - chr7_1:15071123-15071142 Msa1011140:CDS 55.0%
TGCTCCTCTTGCTCATGCTG+TGG - chr7_1:15071187-15071206 Msa1011140:CDS 55.0%
GCTCCTCTTGCTCATGCTGT+GGG - chr7_1:15071188-15071207 Msa1011140:CDS 55.0%
TGATGTGCTTGGACTGCGAG+TGG - chr7_1:15071481-15071500 Msa1011140:intron 55.0%
! TGGAGAGAGAGCGTGCTACA+GGG - chr7_1:15071541-15071560 Msa1011140:intron 55.0%
TGGGAGGACTAGACCCTTGA+TGG - chr7_1:15071682-15071701 Msa1011140:intron 55.0%
TTCAGCTGCAGCCAGCATGA+TGG + chr7_1:15071988-15072007 None:intergenic 55.0%
!! ATAGAGGAGCTTGGTGCACC+AGG - chr7_1:15072143-15072162 Msa1011140:intron 55.0%
! ATGGTGGCGCGTGGGGTAAT+CGG + chr7_1:15069516-15069535 None:intergenic 60.0%
! GAAGAGAATGGTGGCGCGTG+GGG + chr7_1:15069523-15069542 None:intergenic 60.0%
! GAGAAGAGAATGGTGGCGCG+TGG + chr7_1:15069525-15069544 None:intergenic 60.0%
TACAGCACACGCTCTCGGAG+TGG + chr7_1:15069630-15069649 None:intergenic 60.0%
GCTGTAGAAGTTCCCGGTGG+AGG - chr7_1:15069644-15069663 Msa1011140:CDS 60.0%
! CTGGAGAGAGAGCGTGCTAC+AGG - chr7_1:15071540-15071559 Msa1011140:intron 60.0%
! CATGCTGGCTGCAGCTGAAC+TGG - chr7_1:15071989-15072008 Msa1011140:intron 60.0%
GCGTGGGGTAATCGGAAGCG+TGG + chr7_1:15069508-15069527 None:intergenic 65.0%
ACGCTCTCGGAGTGGACCAC+CGG + chr7_1:15069622-15069641 None:intergenic 65.0%
TGACGCGGGTGGGTCGAGTG+GGG + chr7_1:15069592-15069611 None:intergenic 70.0%
GTGACGCGGGTGGGTCGAGT+GGG + chr7_1:15069593-15069612 None:intergenic 70.0%
ACTCGACCCACCCGCGTCAC+CGG - chr7_1:15069593-15069612 Msa1011140:CDS 70.0%
ACCACCGGAGACCGGTGACG+CGG + chr7_1:15069607-15069626 None:intergenic 70.0%
CGGAGTGGACCACCGGAGAC+CGG + chr7_1:15069615-15069634 None:intergenic 70.0%
GGTGACGCGGGTGGGTCGAG+TGG + chr7_1:15069594-15069613 None:intergenic 75.0%
CGGAGACCGGTGACGCGGGT+GGG + chr7_1:15069602-15069621 None:intergenic 75.0%
CCACCCGCGTCACCGGTCTC+CGG - chr7_1:15069600-15069619 Msa1011140:CDS 75.0%
CCACCGGAGACCGGTGACGC+GGG + chr7_1:15069606-15069625 None:intergenic 75.0%
! CCGGAGACCGGTGACGCGGG+TGG + chr7_1:15069603-15069622 None:intergenic 80.0%
! CCCGCGTCACCGGTCTCCGG+TGG - chr7_1:15069603-15069622 Msa1011140:CDS 80.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 15069310 15072849 15069310 ID=Msa1011140;Name=Msa1011140
chr7_1 mRNA 15069310 15072849 15069310 ID=Msa1011140-mRNA-1;Parent=Msa1011140;Name=Msa1011140-mRNA-1;_AED=0.15;_eAED=0.15;_QI=178|1|1|1|1|1|4|234|576
chr7_1 exon 15069310 15069678 15069310 ID=Msa1011140-mRNA-1:exon:3911;Parent=Msa1011140-mRNA-1
chr7_1 exon 15069906 15070190 15069906 ID=Msa1011140-mRNA-1:exon:3910;Parent=Msa1011140-mRNA-1
chr7_1 exon 15070360 15071292 15070360 ID=Msa1011140-mRNA-1:exon:3909;Parent=Msa1011140-mRNA-1
chr7_1 exon 15072294 15072849 15072294 ID=Msa1011140-mRNA-1:exon:3908;Parent=Msa1011140-mRNA-1
chr7_1 five_prime_UTR 15072672 15072849 15072672 ID=Msa1011140-mRNA-1:five_prime_utr;Parent=Msa1011140-mRNA-1
chr7_1 CDS 15072294 15072671 15072294 ID=Msa1011140-mRNA-1:cds;Parent=Msa1011140-mRNA-1
chr7_1 CDS 15070360 15071292 15070360 ID=Msa1011140-mRNA-1:cds;Parent=Msa1011140-mRNA-1
chr7_1 CDS 15069906 15070190 15069906 ID=Msa1011140-mRNA-1:cds;Parent=Msa1011140-mRNA-1
chr7_1 CDS 15069544 15069678 15069544 ID=Msa1011140-mRNA-1:cds;Parent=Msa1011140-mRNA-1
chr7_1 three_prime_UTR 15069310 15069543 15069310 ID=Msa1011140-mRNA-1:three_prime_utr;Parent=Msa1011140-mRNA-1
Gene Sequence

>Msa1011140

ATGGAACTCTTACACTTCCACGCTTCCGATTACCCCACGCGCCACCATTCTCTTCTCAAACAAACCACTACCACTCACCACCGCTTACTCTCACTCTTCTTCCCCACTCGACCCACCCGCGTCACCGGTCTCCGGTGGTCCACTCCGAGAGCGTGTGCTGTAGAAGTTCCCGGTGGAGGAAAGATGGTGATAGAGCTTGTCGGTGCTTTCAATGATTTGACTGAGAGGATGAAGGTGTTATCCACAAGTTCCTCTGGTCTTCTTTTCAAATCATTGAAACTCTCCATTCCTGTTCTTCAAAGCTCTCCTCTTACTCCTGATGGTCGCTCTCCTCTTTCCAAAGCTTTATCCATTGCCATGCTTCTCGCTGATCTTCAGATGGATGCAGAAGTTATATCTGCTGGAATATTGAGAGAGGTGTTGGAAGTAGGTGAGTTAAATCTACATGAAGTTCGAAGTCAGATAGGTTCTGCTACTGCTCATTTGGTGCACGAGAGTTTGCGTGTTAAGAACTTTGCATCTAGAGTAGACATTCTGGATGAAGAGAATGCTGCTGCTTTGAGAAAGTTCTGTCTCACTTACTATGACATTAGAGCTTTGATTTTGGACTTGGCTTTGAAGCTTGACATGATGAGGCATCTTGGTCACCTTCCAAGGTATCAGCAGCAGATCATTTCTCTGCAAGTTATGAAAATATATGCTCCTCTTGCTCATGCTGTGGGAATTAACTACATATCACTTGAATTGGAAGATCTCTCGTTTCAGTATTTGTTTCCTTATTCATATCTTTATGTGGATACATGGTTGAGAAGTCAGGAGACAGGTGGTATATCTCTTATCGATGTATACAAAGATGAATTGCTTCAGTCACTAAAATCTGATCCCATATTTGCGGAATTAGTGGATGATATCTCAGTTAAAGGTCGTTATAAAAGTCGTTACAGCACAATGAAGAAGCTCTTGAAGGATGGTCGGAGACCAGAAGATGTAAATGATGTGCTTGGACTGCGAGTGGTGTTGAACCCTAAGTCTGGAGATAATGCATTGGAAGCTGGAGAGAGAGCGTGCTACAGGGCTCATCAAATCATCCAATCTATGTGGAAAGAAATCCCTTCTCGGACTAAAGATTATATTGCCAGGCCAAAAGGGAATGGATACAAAAGTTTGCATATGGCAGTGGATGTAAGTGAAATTGGGAGGACTAGACCCTTGATGGAAATACAGATAAGAACTACTGAAATGGATAGGTTAGCTGTTGGTGGAATGGCATCTCATTCATTATACAAGGCTGGTCTTACTAATCCAGAGGAGGCAAAGCGTTTAAAGACCATCATGCTGGCTGCAGCTGAACTGGCTGCTTTGCGCCTTAAAGATTTTCCAAGTGCAAATCATAAAGGGATTGAATTTGATCAGAGAGATAGAGTATTTCGCCTTCTCGACAAGAACGGAGATGGGAAGATAAGCATTGAGGAACTTACAGAGGTGATAGAGGAGCTTGGTGCACCAGGAGAAGATGCACATGACATGATGCTGCTTCTTGACTCGAACAGTGATGGCTCCCTCAGCTCTGATGAATTTCAGATGTTCCAAAAACAGGTCGAGATGGTTCGTAATTTAGAGGACAGAGATGATGAATACAAGAAAATATTGGATGAGAAACTTCATATGGCAGATGATAGTGGTTTAATTCAGGTATATAATAAGGAGTTTGGCAACAGGCTTGTGAGCTAG

Protein sequence

>Msa1011140

MELLHFHASDYPTRHHSLLKQTTTTHHRLLSLFFPTRPTRVTGLRWSTPRACAVEVPGGGKMVIELVGAFNDLTERMKVLSTSSSGLLFKSLKLSIPVLQSSPLTPDGRSPLSKALSIAMLLADLQMDAEVISAGILREVLEVGELNLHEVRSQIGSATAHLVHESLRVKNFASRVDILDEENAAALRKFCLTYYDIRALILDLALKLDMMRHLGHLPRYQQQIISLQVMKIYAPLAHAVGINYISLELEDLSFQYLFPYSYLYVDTWLRSQETGGISLIDVYKDELLQSLKSDPIFAELVDDISVKGRYKSRYSTMKKLLKDGRRPEDVNDVLGLRVVLNPKSGDNALEAGERACYRAHQIIQSMWKEIPSRTKDYIARPKGNGYKSLHMAVDVSEIGRTRPLMEIQIRTTEMDRLAVGGMASHSLYKAGLTNPEEAKRLKTIMLAAAELAALRLKDFPSANHKGIEFDQRDRVFRLLDKNGDGKISIEELTEVIEELGAPGEDAHDMMLLLDSNSDGSLSSDEFQMFQKQVEMVRNLEDRDDEYKKILDEKLHMADDSGLIQVYNKEFGNRLVS*